Citrus Sinensis ID: 005734
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 680 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGU7 | 695 | Probable LRR receptor-lik | yes | no | 0.979 | 0.958 | 0.520 | 0.0 | |
| C0LGQ4 | 678 | Probable LRR receptor-lik | no | no | 0.973 | 0.976 | 0.540 | 0.0 | |
| Q9SIZ4 | 489 | Inactive receptor-like se | no | no | 0.597 | 0.830 | 0.464 | 1e-104 | |
| Q9LYN6 | 499 | Probable inactive recepto | no | no | 0.504 | 0.687 | 0.505 | 8e-98 | |
| C0LGH8 | 664 | Probable LRR receptor-lik | no | no | 0.907 | 0.929 | 0.338 | 6e-94 | |
| Q9M2Z1 | 1002 | Leucine-rich repeat recep | no | no | 0.792 | 0.537 | 0.269 | 7e-47 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.789 | 0.535 | 0.257 | 4e-46 | |
| Q9SGP2 | 996 | Receptor-like protein kin | no | no | 0.758 | 0.518 | 0.264 | 1e-39 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.805 | 0.438 | 0.262 | 2e-39 | |
| Q9SYQ8 | 980 | Receptor protein kinase C | no | no | 0.807 | 0.560 | 0.237 | 5e-39 |
| >sp|C0LGU7|Y5458_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/709 (52%), Positives = 475/709 (66%), Gaps = 43/709 (6%)
Query: 1 MGGRWNSIGFQFFCFLVLINNLQGCWSLNLE--GMALLEFRTRVISDPFGVFSNWNKNDS 58
MG RWN IGFQF CF+ LI LQ SL+LE G LL+FR RV SDP G +NWN +D
Sbjct: 1 MGCRWNPIGFQFSCFMFLIITLQSRSSLSLESEGFVLLKFRARVDSDPHGTLANWNVSDH 60
Query: 59 TP-CLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGE 117
C W GV C++ KVQML++ SL GTLAP+L +LS+LR L+L KN SG IP E
Sbjct: 61 DHFCSWFGVTCVDNKVQMLNLSGCSLGGTLAPELSQLSELRSLILSKNKLSGDIPNEFAS 120
Query: 118 LTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD- 176
KLE LDL +N L+G++P E++++ + + LLL NKF G + ++ R L ++Q +
Sbjct: 121 FAKLEFLDLRDNNLNGVVPPELNKVLTPENLLLSGNKFAGFMTVKFLRLQSLYKVQMNKN 180
Query: 177 -YLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSC--ANLPGSSETHLVQ---HSQN 230
L+S + VNRK G + + SL T + +S ++V+ H +N
Sbjct: 181 RELSSVSADVLDCVNRKLG---YCVSRRSLITRNKAKAFVLRIRATSRHYMVRRESHGKN 237
Query: 231 LIN-----------VARRKLLEQSSNLAAEPA-TVGSSSDQVIALPTSRSSGTFPAIPTA 278
+ RR+LLE++SNLAA PA S S ++I + RSSG+FPA+ A
Sbjct: 238 YVVNYHPSENETSIFKRRELLEETSNLAAMPAPDTPSPSPEIITIVFPRSSGSFPALTNA 297
Query: 279 TKKHFPGPAASPPIVSAVQGSIS-----KFNKSSKPTSPAPSDSSESIWKYFLIIPGLFA 333
K+ P S P +I+ KF + SK + +W Y +I F
Sbjct: 298 KKRIPPLIPPSSPPPLPTNNTIASDPPRKFEEKSK--------GFKDVWLYVVIGVAAFV 349
Query: 334 VLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDFSNIIDT 393
++I A F + RAV++I PW+TGLSGQLQKAFVTGVPKLNR EL+TACEDFSNII+
Sbjct: 350 AMLIIVAVIFFFRKRAVKSIGPWKTGLSGQLQKAFVTGVPKLNRSELETACEDFSNIIEA 409
Query: 394 QSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC 453
G T+YKGTLSSGVEIAVA+TAI +++W ++ EM YR+++DT+SR+NHKNF+NLIGYC
Sbjct: 410 FDGYTVYKGTLSSGVEIAVASTAILETREWTRAMEMTYRRRIDTMSRVNHKNFINLIGYC 469
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513
E+DEPFNRMMVFEYAPNGT+FEHLH KEM+HLDWNAR RIIMGTAYCLQYM HELNPP++
Sbjct: 470 EEDEPFNRMMVFEYAPNGTLFEHLHDKEMEHLDWNARTRIIMGTAYCLQYM-HELNPPIS 528
Query: 514 HSNLSSHCIYLTDDYAAKVAEICFT--TIALPKSKVSDDIENSVLPPLADPETNIYSFGI 571
H+ L S IYLTDDYAAKV E+ F+ T + P+ +S D++ S+LP +PETN+YSFG+
Sbjct: 529 HTKLVSSAIYLTDDYAAKVGEVPFSGQTGSKPRKPMSGDLDQSLLPLPPEPETNVYSFGV 588
Query: 572 LMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631
LMLEIISGKL EE E SI KWA+ YL E N MIDP+L ++K+ ELEAIC+V + C
Sbjct: 589 LMLEIISGKLSDSEE-EGSILKWASKYL-ENDNLRDMIDPTLTTYKEEELEAICDVARHC 646
Query: 632 IKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILSAETT 680
+K D QRP M ++ QL++VINIS EQA PRLSPLWWAELEILS+E T
Sbjct: 647 LKLDESQRPKMKYVVQQLKEVINISQEQATPRLSPLWWAELEILSSEAT 695
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|C0LGQ4|MRH1_ARATH Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/684 (54%), Positives = 471/684 (68%), Gaps = 22/684 (3%)
Query: 9 GFQFFCFLVLINNLQGCWSLNL--EGMALLEFRTRVISDPFGVFSNWNKND-STPCLWSG 65
GF F F LI LQ SL+L +G ALL+FR RV SDP G +NWN + + C WSG
Sbjct: 5 GFHFPWFFFLIIGLQAPLSLSLTSQGSALLKFRARVNSDPHGTLANWNVSGINDLCYWSG 64
Query: 66 VRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLD 125
V C++GKVQ+LD+ SLEGTLAP+L +LSDLR L+L +NHFSG IPKE G LE+LD
Sbjct: 65 VTCVDGKVQILDLSGYSLEGTLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLD 124
Query: 126 LSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185
L N LSG IP E+S SLK LLL NKF + +++ R E++ + +A
Sbjct: 125 LRENDLSGQIPPELSNGLSLKHLLLSGNKFSDDMRIKIVRLQSSYEVRLKKSPKLSPLAV 184
Query: 186 IRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLIN----VARRKLLE 241
+ +NRK G + + + ++ ++ + + RR+LLE
Sbjct: 185 LGCINRKLGHCVSR--NRIIQVKKVEAIVFRIKATSRRFLKAFPSFLEETDIYKRRELLE 242
Query: 242 QSSNLAAEPATVGSSSDQ-VIALPTSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQGSI 300
++SNLAAEPA S +I + RSSG+FPA+ A K+ PP+ S +GS
Sbjct: 243 ETSNLAAEPAPSAPSPSPGIITEASPRSSGSFPAVTNAKKRRP---PLVPPVPSPDKGST 299
Query: 301 SKFNKSSKPTSPAPSDSSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGL 360
S ++P S S+ +W Y +I F L+I A F C+ RAV++I PW+TGL
Sbjct: 300 SPDISKNQPQDNKQSKGSKHVWLYVVIAVASFVGLLIIVAVIFFCRKRAVKSIGPWKTGL 359
Query: 361 SGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSS 420
SGQLQKAFVTGVPKLNR EL+TACEDFSNII+T G T+YKGTLSSGVEIAVA+TAI S
Sbjct: 360 SGQLQKAFVTGVPKLNRSELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAES 419
Query: 421 KDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK 480
K+W ++ EMAYR+++DTLSRINHKNFVNLIGYCE+D+PFNRMMVFEYAPNGT+FEHLH K
Sbjct: 420 KEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDK 479
Query: 481 EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540
E +HLDW+ARMRIIMGTAYCLQ+MH +NPP+AH++ +S IYLTDDYAAKV+EI F
Sbjct: 480 ETEHLDWSARMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEIYLTDDYAAKVSEIPFNLE 538
Query: 541 AL--PKSKVSDDIENS--VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596
A PK VS D+E + +LPP +PE N++SFG+LMLEIISGKL + +E SIE+WA+
Sbjct: 539 ARLNPKKHVSGDLEQTSLLLPP--EPEANVHSFGVLMLEIISGKLSFSDEYG-SIEQWAS 595
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
YL E + MIDPSLK+FK+ ELE IC+VI+EC+KT+ RQRP+M D+ QL+QVINI+
Sbjct: 596 KYL-EKDDLGEMIDPSLKTFKEEELEVICDVIRECLKTEQRQRPSMKDVAEQLKQVINIT 654
Query: 657 PEQAVPRLSPLWWAELEILSAETT 680
PE+A PR SPLWWAELEILS+E T
Sbjct: 655 PEKATPRSSPLWWAELEILSSEAT 678
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May be involved in the regulation of root hairs development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SIZ4|Y2027_ARATH Inactive receptor-like serine/threonine-protein kinase At2g40270 OS=Arabidopsis thaliana GN=At2g40270 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/424 (46%), Positives = 283/424 (66%), Gaps = 18/424 (4%)
Query: 258 DQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQGSISKFNKSSKPT-----SP 312
++V+A T+ SS PA KH A++ VS Q S + S P+ SP
Sbjct: 77 NRVVAATTTPSSSPEPA-----PKHVSTKAST---VSEPQKRSSTQDVSPSPSAPLANSP 128
Query: 313 APSDSSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGV 372
P +S S+ + G F +L++A +F ++A +T+ PWRTGLSGQLQK FVTG+
Sbjct: 129 IPRNSHSSVPLVVGCVGGAFFLLLVATGLYF-FTSKAGKTVNPWRTGLSGQLQKVFVTGI 187
Query: 373 PKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYR 432
P L R E++ ACEDFSN+I + ++KGTLSSGVEIAVA+ A T++KDW S E+ +R
Sbjct: 188 PVLKRSEIEAACEDFSNVIGSCPIGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFR 247
Query: 433 KQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR 492
K+++ LS+INHKNF NL+GYCE+ EPF R+++FEYAPNG++FEHLH KE +HLDW R+R
Sbjct: 248 KKIEMLSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLR 307
Query: 493 IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE 552
I MG AYCL +M H+LNPP+AH+NL S + LT+DYA KV++ F + + ++ +
Sbjct: 308 IAMGLAYCLDHM-HQLNPPIAHTNLVSSSLQLTEDYAVKVSDFSFGSSETETNINNNTVI 366
Query: 553 NSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612
++ + L +PE NIYSFG+L+ E+I+GKL K S++ D+L + M+DP+
Sbjct: 367 DTHISAL-NPEDNIYSFGLLLFEMITGKLIESVNKPDSVDSSLVDFLRG-ETLAKMVDPT 424
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAEL 672
L+S+ ++E I EVIK C++TD ++RPTM ++ LR++ +SP A P+LSPLWWAEL
Sbjct: 425 LESYDA-KIENIGEVIKSCLRTDPKERPTMQEVTGWLREITGLSPNDATPKLSPLWWAEL 483
Query: 673 EILS 676
E+LS
Sbjct: 484 EVLS 487
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LYN6|Y3565_ARATH Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana GN=At3g56050 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (919), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 178/352 (50%), Positives = 252/352 (71%), Gaps = 9/352 (2%)
Query: 328 IPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDF 387
I G +L++A FF +++A +++ PWRTGLSGQLQK F+TGVPKL R E++ ACEDF
Sbjct: 152 IAGAVFILLLATGVFF-FKSKAGKSVNPWRTGLSGQLQKVFITGVPKLKRSEIEAACEDF 210
Query: 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFV 447
SN+I + T++KGTLSSGVEIAVA+ A S+K+W + EM +RK+++ LS+INHKNFV
Sbjct: 211 SNVIGSCPIGTLFKGTLSSGVEIAVASVATASAKEWTNNIEMQFRKKIEMLSKINHKNFV 270
Query: 448 NLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE 507
NL+GYCE++EPF R++VFEYA NGTVFEHLH KE +HLDW R+RI MG AYCL +MH
Sbjct: 271 NLLGYCEEEEPFTRILVFEYASNGTVFEHLHYKESEHLDWVMRLRIAMGIAYCLDHMHG- 329
Query: 508 LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP---KSKVSDDIENSVLPPLADPET 564
L PP+ HSNL S + LT+DYA K+A+ F + P +S + I+ ++ E
Sbjct: 330 LKPPIVHSNLLSSSVQLTEDYAVKIADFNFGYLKGPSETESSTNALIDTNISE--TTQED 387
Query: 565 NIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAI 624
N++SFG+L+ E+++GKLP +K SI+ A +L + M+DP+++SF + ++E I
Sbjct: 388 NVHSFGLLLFELMTGKLPESVQKGDSIDTGLAVFLRG-KTLREMVDPTIESFDE-KIENI 445
Query: 625 CEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILS 676
EVIK CI+ D +QRP M ++ +LR++ +SP+ +P+LSPLWWAELE+LS
Sbjct: 446 GEVIKSCIRADAKQRPIMKEVTGRLREITGLSPDDTIPKLSPLWWAELEVLS 497
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Arabidopsis thaliana (taxid: 3702) |
| >sp|C0LGH8|Y1634_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 345 bits (886), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 239/706 (33%), Positives = 350/706 (49%), Gaps = 89/706 (12%)
Query: 11 QFFCFLVLINNLQGCWSLNLEGMA------LLEFRTRVISDPFGVFSNWNKNDSTPCLWS 64
++FC L L+ G + ++ +G A L F+ + DP V SNWN +S PC W+
Sbjct: 4 KYFCSLALV---LGLFFVSCDGFASNEVQALRRFKEAIYEDPLLVMSNWNDPNSDPCDWT 60
Query: 65 GVRCLNGK--VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLE 122
G+ C K V +++ S++G LAP+LG+++ L+ L+L N G IPKE+G L L+
Sbjct: 61 GIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNLK 120
Query: 123 LLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD--YLTS 180
+LDL NN L G IP EI L + + L +N G +P EL L EL D S
Sbjct: 121 ILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDRNRLQGS 180
Query: 181 AEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET-HLVQHSQNLINVARRKL 239
VAG K +S AN+ G ++ + S N K
Sbjct: 181 LLVAGASGYQSK--------------VYSSNSSANIAGLCKSLKVADFSYNFFVGNIPKC 226
Query: 240 LEQ------SSNLAAEPATVGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIV 293
LE N SS Q ++ G+ P+A+P
Sbjct: 227 LENLPRTSFQGNCMQNKDLKHRSSSQCANAQLVKTHGS--------------PSAAPKHQ 272
Query: 294 SAVQGSISKFNKSSKPTSPAPSDSSESIWKYFL-IIPGLFAVLIIAAAAFFTCQTRAVRT 352
SA ++K +++SKP W L I+ G L++ A F R+
Sbjct: 273 SAQM--VAKHHRASKPK-----------WLLALEIVTGSMVGLLLLVALFSAVHRWNNRS 319
Query: 353 --IRPWRTGLSGQ------LQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTL 404
I PW+ S + + + V +L R EL+ ACEDFSNII + IYKGTL
Sbjct: 320 TLIIPWKKSSSEKEKFTVYVDSEMLKDVSRLTRQELEVACEDFSNIIGLSADSQIYKGTL 379
Query: 405 SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464
G EIAV + + +DW E+ ++++V L+R+NH+N L+GYC++ PF RM+V
Sbjct: 380 KGGSEIAVISLCV-KEEDWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLV 438
Query: 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
FEYA NGT++EHLH E + W RM+I++G A L+Y+H EL+PP S LSS+ IYL
Sbjct: 439 FEYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYL 498
Query: 525 TDDYAAKVAEI-CFTTIALPKSKVSDDIENS----VLP-----PLADPETNIYSFGILML 574
T+D+ K+ + C+ TI K +I + VLP D NIY+FGIL+L
Sbjct: 499 TEDFTPKLVDFECWKTILARSEKNLRNISSQGSICVLPNGMESRYLDVSGNIYAFGILLL 558
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKT 634
EI+SG+ PYC++K IE WA ++L P S ++DP LK F Q +LE +CEV +C+
Sbjct: 559 EIVSGRPPYCKDKGFLIE-WAKEFLEAPEAMSGLVDPELKHFNQEDLETVCEVASQCLNR 617
Query: 635 D------LRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEI 674
D +P++ ++ L I++S + R S L WAEL +
Sbjct: 618 DPTNNNNNHNKPSVQELCETLESRISLSISAEL-RSSSLAWAELAL 662
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 180/669 (26%), Positives = 282/669 (42%), Gaps = 130/669 (19%)
Query: 70 NGKVQMLDMKERSLEGTLAPD------------------------LGKLSDLRFLVLQKN 105
NG++ +LD+ L GTL P+ LGK L + + +N
Sbjct: 358 NGRLVILDLSSNKLTGTLPPNMCSGNRLMTLITLGNFLFGSIPDSLGKCESLTRIRMGEN 417
Query: 106 HFSGVIPKELGELTKL---ELLD----------------------LSNNKLSGIIPVEIS 140
+G IPKEL L KL EL D LSNN+LSG +P I
Sbjct: 418 FLNGSIPKELFGLPKLSQVELQDNYLTGELPISGGGVSGDLGQISLSNNQLSGSLPAAIG 477
Query: 141 RLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKI 200
L +++LLL NKF GSIP E+ R LS+L F L S +A +I
Sbjct: 478 NLSGVQKLLLDGNKFSGSIPPEIGRLQQLSKLDFSHNLFSGRIAP-------------EI 524
Query: 201 GEDSLHTNGDHSCANLPGSSETHLVQHS-QNLINVARRKLLEQSSNLAAEPATVGS-SSD 258
L T D S L G L N +N++R L + + P T+ S S
Sbjct: 525 SRCKLLTFVDLSRNELSGDIPNELTGMKILNYLNLSRNHL------VGSIPVTIASMQSL 578
Query: 259 QVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQGSISKFNKSS--KPTSPAPSD 316
+ + SG P+ + ++ + + G K S KP S
Sbjct: 579 TSVDFSYNNLSGLVPSTGQFSYFNYTSFVGNSHLCGPYLGPCGKGTHQSHVKPLSATTKL 638
Query: 317 SSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLN 376
+ ++ FA++ I A R + WR AF
Sbjct: 639 LLVLGLLFCSMV---FAIVAIIKAR----SLRNASEAKAWRL-------TAFQ------- 677
Query: 377 RLELDTACEDF------SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMA 430
LD C+D NII +YKGT+ G +AV A S S +
Sbjct: 678 --RLDFTCDDVLDSLKEDNIIGKGGAGIVYKGTMPKGDLVAVKRLATMSHG---SSHDHG 732
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ ++ TL RI H++ V L+G+C + E ++V+EY PNG++ E LH K+ HL WN R
Sbjct: 733 FNAEIQTLGRIRHRHIVRLLGFCSNHE--TNLLVYEYMPNGSLGEVLHGKKGGHLHWNTR 790
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI-------------CF 537
+I + A L Y+HH+ +P + H ++ S+ I L ++ A VA+ C
Sbjct: 791 YKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECM 850
Query: 538 TTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAA 596
+ IA ++ + ++ D ++++YSFG+++LE+I+GK P E + + I +W
Sbjct: 851 SAIAGSYGYIAPEYAYTL---KVDEKSDVYSFGVVLLELITGKKPVGEFGDGVDIVQWVR 907
Query: 597 DYLNEPRNFSC---MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV- 652
+ N C +ID L S +E+ + V C++ +RPTM +++ L ++
Sbjct: 908 SMTDS--NKDCVLKVIDLRLSSVPVHEVTHVFYVALLCVEEQAVERPTMREVVQILTEIP 965
Query: 653 -INISPEQA 660
I +S +QA
Sbjct: 966 KIPLSKQQA 974
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 158/613 (25%), Positives = 272/613 (44%), Gaps = 76/613 (12%)
Query: 78 MKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV 137
M E L G++ L L L + LQ N+ SG +P G L + LSNN+LSG +P
Sbjct: 414 MGENFLNGSIPKGLFGLPKLTQVELQDNYLSGELPVAGGVSVNLGQISLSNNQLSGPLPP 473
Query: 138 EISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYG 197
I +++LLL NKF+G IP E+ + LS++ F L S +A
Sbjct: 474 AIGNFTGVQKLLLDGNKFQGPIPSEVGKLQQLSKIDFSHNLFSGRIAP------------ 521
Query: 198 FKIGEDSLHTNGDHSCANLPGSSETHLVQHS-QNLINVARRKLLEQSSNLAAEPATVGSS 256
+I L T D S L G + N +N++R L + + P ++ SS
Sbjct: 522 -EISRCKLLTFVDLSRNELSGEIPNEITAMKILNYLNLSRNHL------VGSIPGSI-SS 573
Query: 257 SDQVIALPTSRS--SGTFPAIPTATKKHFPGPAASP----PIVSAVQGSISKFNKSSKPT 310
+ +L S + SG P + ++ +P P + + ++K S
Sbjct: 574 MQSLTSLDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVAKGGHQSHSK 633
Query: 311 SPAPSDSSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVT 370
P + + L+ FAV+ I A + + R WR AF
Sbjct: 634 GPLSASMKLLLVLGLLVCSIAFAVVAIIKARSLKKASES----RAWRL-------TAFQ- 681
Query: 371 GVPKLNRLELDTACEDF------SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL 424
LD C+D NII +YKG + +G +AV A S
Sbjct: 682 --------RLDFTCDDVLDSLKEDNIIGKGGAGIVYKGVMPNGDLVAVKRLAAMSRG--- 730
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH 484
S + + ++ TL RI H++ V L+G+C + E ++V+EY PNG++ E LH K+ H
Sbjct: 731 SSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHE--TNLLVYEYMPNGSLGEVLHGKKGGH 788
Query: 485 LDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI--------- 535
L W+ R +I + A L Y+HH+ +P + H ++ S+ I L ++ A VA+
Sbjct: 789 LHWDTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDS 848
Query: 536 ----CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LS 590
C + IA ++ + ++ D ++++YSFG+++LE+++G+ P E + +
Sbjct: 849 GTSECMSAIAGSYGYIAPEYAYTL---KVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVD 905
Query: 591 IEKWAADYLNEPRNFSC-MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
I +W + ++ ++DP L S +E+ + V C++ +RPTM +++ L
Sbjct: 906 IVQWVRKMTDSNKDSVLKVLDPRLSSIPIHEVTHVFYVAMLCVEEQAVERPTMREVVQIL 965
Query: 650 RQVINISPEQAVP 662
++ + P + P
Sbjct: 966 TEIPKLPPSKDQP 978
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 160/605 (26%), Positives = 261/605 (43%), Gaps = 89/605 (14%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
V +L++ S G ++ +G S+L L+L N F+G +P+E+G L L L S NK S
Sbjct: 422 VNLLELVNNSFSGEISKSIGGASNLSLLILSNNEFTGSLPEEIGSLDNLNQLSASGNKFS 481
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRK 192
G +P + L L L L N+F G + + + L+EL D N
Sbjct: 482 GSLPDSLMSLGELGTLDLHGNQFSGELTSGIKSWKKLNELNLAD-------------NEF 528
Query: 193 FGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPAT 252
G+ +IG S+ D S G L N +N++ +L
Sbjct: 529 TGKIPDEIGSLSVLNYLDLSGNMFSGKIPVSLQSLKLNQLNLSYNRL------------- 575
Query: 253 VGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQGSISKFNKSSKPTSP 312
S D LP S + + K F G +P + ++G N++ K
Sbjct: 576 ---SGD----LPPSLAKDMY-------KNSFIG---NPGLCGDIKGLCGSENEAKK---- 614
Query: 313 APSDSSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGV 372
+W I L A++++A A+F + R + R + K +
Sbjct: 615 -----RGYVWLLRSIFV-LAAMVLLAGVAWFYFKYRTFKKARAM------ERSKWTLMSF 662
Query: 373 PKLNRLE---LDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKS--- 426
KL E L++ ED N+I + +YK L++G +AV S K+
Sbjct: 663 HKLGFSEHEILESLDED--NVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPE 720
Query: 427 -------QEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHI 479
Q+ A+ +V+TL +I HKN V L C + +++V+EY PNG++ + LH
Sbjct: 721 KGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDC--KLLVYEYMPNGSLGDLLHS 778
Query: 480 KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT- 538
+ L W R +II+ A L Y+HH+ PP+ H ++ S+ I + DY A+VA+
Sbjct: 779 SKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAK 838
Query: 539 ----TIALPKS-KVSDDIENSVLPPLA-----DPETNIYSFGILMLEIISGKLPYCEE-K 587
T PKS V + P A + +++IYSFG+++LEI++ K P E
Sbjct: 839 AVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELG 898
Query: 588 ELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647
E + KW L++ + +IDP L S + E+ I V C RP+M ++
Sbjct: 899 EKDLVKWVCSTLDQ-KGIEHVIDPKLDSCFKEEISKILNVGLLCTSPLPINRPSMRRVVK 957
Query: 648 QLRQV 652
L+++
Sbjct: 958 MLQEI 962
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 165/628 (26%), Positives = 277/628 (44%), Gaps = 80/628 (12%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
K+ +D+ L G + P LGKLS L L L N F +P EL TKL +L L N L
Sbjct: 648 KLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSL 707
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNR 191
+G IP EI L +L L L N+F GS+P + + + L EL+ S N
Sbjct: 708 NGSIPQEIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRL-------------SRNS 754
Query: 192 KFGQYGFKIGE-DSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSN-LAAE 249
G+ +IG+ L + D S N G + + +++ + L+ S N L E
Sbjct: 755 LTGEIPVEIGQLQDLQSALDLSYNNFTGDIPS-------TIGTLSKLETLDLSHNQLTGE 807
Query: 250 -PATVGSSSDQVIALPTSRSSGTFPAIPTATKKHFPG-PAASPPIVSAVQGS-ISKFNKS 306
P +VG + +F + KK F PA S + + GS +S+ N+
Sbjct: 808 VPGSVGDMKS------LGYLNVSFNNLGGKLKKQFSRWPADSFLGNTGLCGSPLSRCNRV 861
Query: 307 SKPTSPAPSDSSESIWKYFLIIPGLFAV-----LIIAAAAFFTCQTRAVRTIRPWRTGLS 361
+ + S+ S+ +II + A+ +I+ A FF + + + T +
Sbjct: 862 -RSNNKQQGLSARSV----VIISAISALTAIGLMILVIALFFKQRHDFFKKVGHGSTAYT 916
Query: 362 GQLQKAFVTGVP--KLNRLELDTACEDFSN---------IIDTQSGCTIYKGTLSSGVEI 410
+ T P + + D ED +I + +YK L +G +
Sbjct: 917 SSSSSSQATHKPLFRNGASKSDIRWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETV 976
Query: 411 AVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPN 470
AV KD L S + ++ ++V TL RI H++ V L+GYC ++++EY N
Sbjct: 977 AVKKILW---KDDLMSNK-SFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKN 1032
Query: 471 GTVFEHLH------IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524
G++++ LH K+ LDW AR+RI +G A ++Y+HH+ PP+ H ++ S + L
Sbjct: 1033 GSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLL 1092
Query: 525 TDDYAAKVAEICFTTIALPKSKVSDDIE-------NSVLPPL-----ADPETNIYSFGIL 572
+ A + + + + D + P A ++++YS GI+
Sbjct: 1093 DSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIV 1152
Query: 573 MLEIISGKLPYCE--EKELSIEKWAADYLNEPRNF-SCMIDPSLKSFKQNELEAICEVIK 629
++EI++GK+P E+ + +W +L + +IDP LK E +A C+V++
Sbjct: 1153 LMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLE 1212
Query: 630 ---ECIKTDLRQRPTMNDIIVQLRQVIN 654
+C KT ++RP+ L V N
Sbjct: 1213 IALQCTKTSPQERPSSRQACDSLLHVYN 1240
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SYQ8|CLV1_ARATH Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 152/639 (23%), Positives = 285/639 (44%), Gaps = 90/639 (14%)
Query: 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNN 129
NG + LD+ + L G + DL + L L+L N F G IP+ELG+ L + + N
Sbjct: 360 NGNLIKLDVSDNHLTGLIPKDLCRGEKLEMLILSNNFFFGPIPEELGKCKSLTKIRIVKN 419
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA----- 184
L+G +P + LP + + L +N F G +P+ +S +L ++ + S E+
Sbjct: 420 LLNGTVPAGLFNLPLVTIIELTDNFFSGELPVTMSG-DVLDQIYLSNNWFSGEIPPAIGN 478
Query: 185 --GIRSV----NRKFGQYGFKIGE----DSLHTNGDHSCANLPGS----SETHLVQHSQN 230
++++ NR G +I E ++T+ ++ +P S S V S+N
Sbjct: 479 FPNLQTLFLDRNRFRGNIPREIFELKHLSRINTSANNITGGIPDSISRCSTLISVDLSRN 538
Query: 231 LINVARRKLLEQSSNLAAEPATVGSSSDQVI-ALPTSRSSGTFPAIPTATKKHFPGPAAS 289
IN K + NL T+ S +Q+ ++PT G ++ T F +
Sbjct: 539 RINGEIPKGINNVKNLG----TLNISGNQLTGSIPTG--IGNMTSL-TTLDLSFNDLSGR 591
Query: 290 PPIVSAVQGSISKFNKSSK--------------PTSPA-PSDSSESIWKYFLIIPGLFAV 334
P+ G FN++S PT P SD + + L P +
Sbjct: 592 VPL----GGQFLVFNETSFAGNTYLCLPHRVSCPTRPGQTSDHNHTA----LFSPSRIVI 643
Query: 335 LIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTA----CEDFSNI 390
+IAA + A+R + + QK+ + +L+ + C NI
Sbjct: 644 TVIAAITGLILISVAIRQMNKKKN------QKSLAWKLTAFQKLDFKSEDVLECLKEENI 697
Query: 391 IDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
I +Y+G++ + V++A+ + + + ++ TL RI H++ V L+
Sbjct: 698 IGKGGAGIVYRGSMPNNVDVAIKRLVGRGTG----RSDHGFTAEIQTLGRIRHRHIVRLL 753
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
GY + + ++++EY PNG++ E LH + HL W R R+ + A L Y+HH+ +P
Sbjct: 754 GYVANKD--TNLLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLHHDCSP 811
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEI-------------CFTTIALPKSKVSDDIENSVLP 557
+ H ++ S+ I L D+ A VA+ C ++IA ++ + ++
Sbjct: 812 LILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTL-- 869
Query: 558 PLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADY---LNEPRNFS---CMID 610
D ++++YSFG+++LE+I+GK P E E + I +W + + +P + + ++D
Sbjct: 870 -KVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVD 928
Query: 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
P L + + + ++ C++ + RPTM +++ L
Sbjct: 929 PRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967
|
Involved in the detection of CLV3 and CLV3-like peptides, that act as extracellular signals regulating meristem maintenance. Acts with CLV3 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 680 | ||||||
| 255587469 | 678 | receptor protein kinase, putative [Ricin | 0.991 | 0.994 | 0.653 | 0.0 | |
| 225443782 | 724 | PREDICTED: probable LRR receptor-like se | 0.995 | 0.935 | 0.590 | 0.0 | |
| 224116872 | 659 | predicted protein [Populus trichocarpa] | 0.961 | 0.992 | 0.610 | 0.0 | |
| 449464992 | 715 | PREDICTED: probable LRR receptor-like se | 0.985 | 0.937 | 0.557 | 0.0 | |
| 297740514 | 654 | unnamed protein product [Vitis vinifera] | 0.944 | 0.981 | 0.572 | 0.0 | |
| 357518967 | 707 | Leucine-rich repeat receptor-like protei | 0.977 | 0.940 | 0.540 | 0.0 | |
| 359493602 | 710 | PREDICTED: probable LRR receptor-like se | 0.983 | 0.942 | 0.514 | 0.0 | |
| 356528328 | 653 | PREDICTED: probable LRR receptor-like se | 0.955 | 0.995 | 0.541 | 0.0 | |
| 147777778 | 696 | hypothetical protein VITISV_017762 [Viti | 0.983 | 0.961 | 0.516 | 0.0 | |
| 15242513 | 668 | leucine-rich repeat protein kinase-like | 0.961 | 0.979 | 0.528 | 0.0 |
| >gi|255587469|ref|XP_002534282.1| receptor protein kinase, putative [Ricinus communis] gi|223525577|gb|EEF28099.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/684 (65%), Positives = 529/684 (77%), Gaps = 10/684 (1%)
Query: 1 MGGRWNSIGFQFFCFLVLI--NNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDS 58
M GRWN GFQFF FLVLI + +QG WSLN EG LLEFRT V SDPFG F+NWN ND
Sbjct: 1 MEGRWNPNGFQFFSFLVLILGHKIQGSWSLNDEGSVLLEFRTTVSSDPFGAFANWNINDH 60
Query: 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL 118
PCLW GV C+ GKV+ LD+ SLEGTL+P LGKLS L+ LVL KNHF G IPKE+G L
Sbjct: 61 DPCLWRGVHCVTGKVETLDLNGLSLEGTLSPVLGKLSHLKLLVLYKNHFYGTIPKEIGGL 120
Query: 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYL 178
TKLE+LDL N SG +P EI RLPSLK LLL +NKFEGS L++ R LSELQFD+ L
Sbjct: 121 TKLEVLDLRENNFSGTVPAEIGRLPSLKCLLLCDNKFEGSNLLKVGRLNFLSELQFDEDL 180
Query: 179 TSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRK 238
V+G +NRK + GFK+G+D+LH GD+SC L S H+VQ+ + L++ ARR+
Sbjct: 181 ACGVVSGNDCINRKV-RNGFKLGKDTLHECGDNSCDKLASSPGLHMVQNVEILVSSARRR 239
Query: 239 LLEQSSNLAAEPATVGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQG 298
L E SSNL A PA+ GSSS Q+IALPT+RSSG+FPAIP A K P+ +
Sbjct: 240 LFELSSNLPAGPASGGSSSQQIIALPTTRSSGSFPAIPNAKKDPP---PPPAPVAAPPVE 296
Query: 299 SISKFNKSSKPTSPAPSDSSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRT 358
S K +S +P SS + W YFLIIP +FA++II+ C+ R V TI PW+T
Sbjct: 297 SPPKGFQSDSDVTPTNEQSSHT-WIYFLIIPIVFALVIISLGLVLICRKRGVTTIGPWKT 355
Query: 359 GLSGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAIT 418
GLSGQLQKAFVTGVPKLNR EL+TACEDFSNIIDT GCT+YKGTLSSGVEIAVA+T +
Sbjct: 356 GLSGQLQKAFVTGVPKLNRTELETACEDFSNIIDTHEGCTMYKGTLSSGVEIAVASTLVA 415
Query: 419 SSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLH 478
SSKDW K+ E++YRK++DTLSR+NHKNFVNLIG+CE+DEPFNRMMVFEYAPNGT+FEHLH
Sbjct: 416 SSKDWSKNAELSYRKKIDTLSRVNHKNFVNLIGFCEEDEPFNRMMVFEYAPNGTLFEHLH 475
Query: 479 IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538
+KEM+HLDW+ARMRIIMGTAYCLQYMHH+LNPPVAHSNL+SH IYLTDDYAAK+AE+CF
Sbjct: 476 VKEMEHLDWSARMRIIMGTAYCLQYMHHDLNPPVAHSNLNSHSIYLTDDYAAKIAEVCFL 535
Query: 539 TIALPKSKVSDD--IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596
+ KSK+S D E+S LPPL DPETN+YSFGIL+LEIISGKLPY +E+ +EKWAA
Sbjct: 536 PQPVRKSKISGDGESEHSELPPLTDPETNVYSFGILLLEIISGKLPYSKEQG-PLEKWAA 594
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+YLN+ R+ S MIDP+LK+FK NEL+ ICEVI+ECI+ D RQRPTM DI +LR+VI IS
Sbjct: 595 EYLNDKRSISYMIDPTLKAFKNNELDIICEVIQECIQPDPRQRPTMRDITSKLREVITIS 654
Query: 657 PEQAVPRLSPLWWAELEILSAETT 680
P+QA PRLSPLWWAELEILS E T
Sbjct: 655 PDQATPRLSPLWWAELEILSVEAT 678
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225443782|ref|XP_002266057.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45840-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/727 (59%), Positives = 515/727 (70%), Gaps = 50/727 (6%)
Query: 1 MGGRWNSIGFQFFCFLVLIN--NLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDS 58
MGGRWN+ GFQF F VLI +Q CWSLN EG+ALLEFR V SDP+G FSNWN +DS
Sbjct: 1 MGGRWNAFGFQFLIFSVLIIFLGIQRCWSLNSEGLALLEFRAGVDSDPYGAFSNWNSSDS 60
Query: 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL 118
C+W GV C + KVQ LD+ SLEG LAP LGKLS LR LVL KN+FSG IPKE+G L
Sbjct: 61 DGCMWLGVHCYDSKVQTLDLNGLSLEGILAPGLGKLSHLRSLVLHKNNFSGTIPKEIGGL 120
Query: 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYL 178
+LELLDL +N LSG+IP EI +PSLKRLLL +NKFEGSIP++ + LLSELQFD+ L
Sbjct: 121 IRLELLDLRDNNLSGVIPEEIGSMPSLKRLLLCDNKFEGSIPMDAGKLNLLSELQFDENL 180
Query: 179 TSAEVAGIRSVNRKFGQ-------------------------------YGFKIGEDSLHT 207
TS +G NRKFG K G+DS H
Sbjct: 181 TSPVASGTGFANRKFGHCVWQSSLKQLSKEDSFIIPIKGRLKRYVNVLAQLKFGKDSSHG 240
Query: 208 NGDHSCANLPG-SSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTS 266
GD+ C P SE H+VQ ++L N RR+LL+QSSNLAA A+ G S Q+I P +
Sbjct: 241 QGDNCCDTQPRVPSELHMVQDVEDLGNFVRRRLLQQSSNLAAIAAS-GGSPLQLIITPFT 299
Query: 267 RSSGTFPAIPTATKK--HFPGPAASPPIVSAVQ-GSISKFNKSSKPTSPAPS-------- 315
RSSG FPA+ KK H P P SP S+ Q S + + SP S
Sbjct: 300 RSSGAFPAVANEKKKQSHTPAPQPSPADSSSKQTNSTENSHDQASHFSPGNSTNQKTSVD 359
Query: 316 DSSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKL 375
SS +IWKY ++PG+ +LI+AA C++R V TI PW TGLSGQLQKAFVTGVPKL
Sbjct: 360 GSSGNIWKYVFVVPGVALLLIVAAVMLCMCRSRGVTTIGPWTTGLSGQLQKAFVTGVPKL 419
Query: 376 NRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQV 435
NR EL+TACEDFSNII+T CT+YKGTLSSGVEIAVA+T I+SSKDW K EMA+RK++
Sbjct: 420 NRTELETACEDFSNIINTLDDCTVYKGTLSSGVEIAVASTGISSSKDWSKRSEMAFRKKI 479
Query: 436 DTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIM 495
DTLSR+NHKNFVNL+GYCE+D+ F RMMVFEYAPNG++FEHLH+KE++HLDWNAR RIIM
Sbjct: 480 DTLSRVNHKNFVNLLGYCEEDDIFVRMMVFEYAPNGSLFEHLHVKEVEHLDWNARTRIIM 539
Query: 496 GTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS--DDIEN 553
GTAYCLQYM HELNPPVAHSNL+S IYLTDDYAAK+AEI KSK+S ++ E+
Sbjct: 540 GTAYCLQYM-HELNPPVAHSNLTSAAIYLTDDYAAKIAEINIWADLSSKSKISGNEESEH 598
Query: 554 SVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613
S LPPLADPE+N+Y FGIL+LE ISGKLPY EE+ + WAA++LN+ R+ S +IDP+L
Sbjct: 599 SELPPLADPESNVYCFGILLLETISGKLPYSEEQG-PLVNWAAEHLNDKRSISYLIDPTL 657
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELE 673
KSFK NEL+ ICEVI++CI+ + RQRPTM ++ +LR+VI ISP+ A PRLSPLWWAELE
Sbjct: 658 KSFKNNELDIICEVIQDCIQPNPRQRPTMREVTSKLREVIPISPDSATPRLSPLWWAELE 717
Query: 674 ILSAETT 680
ILS E T
Sbjct: 718 ILSVEAT 724
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224116872|ref|XP_002317415.1| predicted protein [Populus trichocarpa] gi|222860480|gb|EEE98027.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/685 (61%), Positives = 502/685 (73%), Gaps = 31/685 (4%)
Query: 1 MGGRWNSIGFQFFCFLVLINNL--QGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDS 58
M GRWNSIGF+ LVL +L Q WSLN EG LL+FR RV DPFG +NWN ND
Sbjct: 1 MRGRWNSIGFRILFLLVLTLSLENQCSWSLNDEGSVLLKFRARVDFDPFGALANWNPNDI 60
Query: 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL 118
PC WSGV C+ GKVQ+LD+ SL+GTLAP+LGKL +LR LVL +NHF+G IPKE+GEL
Sbjct: 61 DPCSWSGVHCVAGKVQILDLSGLSLQGTLAPELGKLVNLRSLVLYRNHFTGTIPKEIGEL 120
Query: 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYL 178
KLELLDL NN SG IP EI RL SLK LLL +NKF GSIP E+ R LL ELQFD L
Sbjct: 121 RKLELLDLRNNNFSGAIPEEIGRLLSLKYLLLRDNKFGGSIPPEIRRLNLLYELQFDGNL 180
Query: 179 TSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRK 238
S G+ VNRK G L G+ VQ+ + ++N RR+
Sbjct: 181 ASGSTTGVSCVNRKLGH-------------------GLQGT-----VQNVEIVVNFERRR 216
Query: 239 LLEQSSNLAAEPATVGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAA-SPPIVSAVQ 297
LLEQSSNL A PA+ GSSS +IALPT+RSSG+FPAIP A K P + P+ +
Sbjct: 217 LLEQSSNLQAAPASGGSSSQPIIALPTTRSSGSFPAIPNAKKHQAQSPVSLDSPVSPPPR 276
Query: 298 GSISKFNKSSKPT-SPAPSD-SSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRP 355
G+ + S KP+ P++ +S + W YFLIIP + I+A C+ + V TI P
Sbjct: 277 GTEHSSHSSEKPSIDQTPTNGTSGNTWMYFLIIPIAGVLGIVAVGLLLMCRKQVVTTIGP 336
Query: 356 WRTGLSGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAAT 415
W+TGLSGQLQKAFVTGVPKLNR EL+TACEDFSNIIDT +G T YKGTLSSGVEI+VA+T
Sbjct: 337 WKTGLSGQLQKAFVTGVPKLNRSELETACEDFSNIIDTFNGFTAYKGTLSSGVEISVAST 396
Query: 416 AITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFE 475
A+TSSKDW KS EMAYRK+++TLSRINHKNFVNLIGYCE+DEPFNRMMVFEYAPNG++FE
Sbjct: 397 AVTSSKDWSKSAEMAYRKKIETLSRINHKNFVNLIGYCEEDEPFNRMMVFEYAPNGSLFE 456
Query: 476 HLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535
HLH++EM+HLDWN R+RIIMG AYCLQYMHH+LNPP+ HS L S I+LTDDYAAK+AEI
Sbjct: 457 HLHVEEMEHLDWNTRLRIIMGVAYCLQYMHHDLNPPIVHSKLCSRAIFLTDDYAAKIAEI 516
Query: 536 CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595
CF A SK+S ++E+S LPP D ETN+Y FG+L+LE+ISGKL Y EE+ +E WA
Sbjct: 517 CFLPQATSNSKISGEMEDS-LPPHVDLETNVYCFGVLLLEVISGKLSYSEEQG-HLENWA 574
Query: 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655
A+YLN+ R+ MIDPSLKSFK NEL+ ICEVI++CI++D R RPTM +I +L++VI+I
Sbjct: 575 AEYLNDKRSIGYMIDPSLKSFKNNELDVICEVIQQCIQSDPRHRPTMKEITSKLKEVISI 634
Query: 656 SPEQAVPRLSPLWWAELEILSAETT 680
SP+QA PRLSPLWWAELEILS E T
Sbjct: 635 SPDQATPRLSPLWWAELEILSVEAT 659
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464992|ref|XP_004150213.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Cucumis sativus] gi|449500820|ref|XP_004161203.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/725 (55%), Positives = 504/725 (69%), Gaps = 55/725 (7%)
Query: 1 MGGRWNSIGFQFFCFLVLI--NNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDS 58
MG W F+F FL LI + ++ C+SLN EG+ALL FR +V SDP+ F +WN N++
Sbjct: 1 MGDGWIPQAFRFSTFLALIVVSGIEVCFSLNDEGLALLAFRAQVTSDPYAAFDDWNPNEN 60
Query: 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL 118
PC W+ V C++G+V LD+ L+GTLAP+LG+L L+ L++ KN F G IP+E L
Sbjct: 61 DPCRWTRVHCVSGEVHKLDLSGLMLKGTLAPELGRLVHLQSLIVYKNCFFGTIPREFEGL 120
Query: 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYL 178
T+LELLDL N LSG IP EISR+ +LK LLL +N+FEGS+PLEL + L ELQFDD L
Sbjct: 121 TQLELLDLRENNLSGKIPTEISRIINLKYLLLCDNEFEGSVPLELQNLSSLYELQFDDDL 180
Query: 179 TSAEVAGIRSVNRKFGQYGF--------------------------------KIGEDSLH 206
A I SV R FG + + K G+DS
Sbjct: 181 VFLWDAEIGSVYRNFGHWIWQRNPIYMKSSDASASEDSAFVRHFSSLPNPLLKHGKDS-- 238
Query: 207 TNGDHSCAN---LPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVI-A 262
DH+ +N LP S + +QN++N RRKLL++SSNLAA P + S I
Sbjct: 239 -QPDHTESNDDYLPSSVLEEVDDSAQNIVNTHRRKLLDESSNLAAAPVSSSLPSSDSINT 297
Query: 263 LPTSRSSGTFPAIPTATKKHFPG--PAASPPIVSAVQGSISKFNKSSKP--TSPAPSDSS 318
+ +SRSSGTFPA+P KKH G P +P ++ + S F S P T +D+S
Sbjct: 298 VTSSRSSGTFPAVP---KKHKQGTTPIPAPLPHPHLRNTSSNF---SDPLTTEQNQTDNS 351
Query: 319 ESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRL 378
+ WKY +II G+ +I+A F C++R V TI PW+TGLSGQLQKAF+TG PKLNR
Sbjct: 352 RNFWKYVIIIGGVSLSVILATIIFCMCRSRGVTTIGPWKTGLSGQLQKAFITGAPKLNRP 411
Query: 379 ELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL 438
EL+ ACEDFSNIIDT TIYKGTLSSGVEIAVA+ ++TSSKDW KS E YRK++DTL
Sbjct: 412 ELEVACEDFSNIIDTFDCSTIYKGTLSSGVEIAVASVSVTSSKDWSKSSEQTYRKKIDTL 471
Query: 439 SRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTA 498
SRINHKNFVNL+GYCE++EPF RMMVFEYAPNGT+FEHLH+KE++HLDW ARMRIIMGTA
Sbjct: 472 SRINHKNFVNLLGYCEEEEPFTRMMVFEYAPNGTLFEHLHVKEVEHLDWGARMRIIMGTA 531
Query: 499 YCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK---VSDDIENSV 555
YCLQYMHH+LNPPVAH+NL+S IYLTDDYAAK+AEI F + + K K D+ E+S
Sbjct: 532 YCLQYMHHDLNPPVAHTNLTSTSIYLTDDYAAKIAEIIFLSNGISKYKNGSSHDNAEHSE 591
Query: 556 LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615
LPPLADPE+N+YSFG+L+LEIISGKLPY EE+ + WAA++LN+ R+ S MID SLKS
Sbjct: 592 LPPLADPESNVYSFGVLLLEIISGKLPYSEEQG-PLVNWAAEFLNDKRSISYMIDQSLKS 650
Query: 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEIL 675
FK NEL+ ICEVI++CIK+D R RPTM DI +LR+VI +SP+Q+VPRLSPLWWAELEIL
Sbjct: 651 FKNNELDVICEVIQDCIKSDPRMRPTMKDITAKLREVIGLSPDQSVPRLSPLWWAELEIL 710
Query: 676 SAETT 680
S E T
Sbjct: 711 SVEAT 715
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297740514|emb|CBI30696.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/692 (57%), Positives = 485/692 (70%), Gaps = 50/692 (7%)
Query: 1 MGGRWNSIGFQFFCFLVLIN--NLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDS 58
MGGRWN+ GFQF F VLI +Q CWSLN EG+ALLEFR V SDP+G FSNWN +DS
Sbjct: 1 MGGRWNAFGFQFLIFSVLIIFLGIQRCWSLNSEGLALLEFRAGVDSDPYGAFSNWNSSDS 60
Query: 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL 118
C+W GV C + KVQ LD+ SLEG LAP LGKLS LR LVL KN+FSG IPKE+G L
Sbjct: 61 DGCMWLGVHCYDSKVQTLDLNGLSLEGILAPGLGKLSHLRSLVLHKNNFSGTIPKEIGGL 120
Query: 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYL 178
+LELLDL +N LSG+IP EI +PSLKRLLL +NKFEGSIP++ + LLSELQFD+ L
Sbjct: 121 IRLELLDLRDNNLSGVIPEEIGSMPSLKRLLLCDNKFEGSIPMDAGKLNLLSELQFDENL 180
Query: 179 TSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRK 238
TS +G NRKFG ++ SS L + +I + R
Sbjct: 181 TSPVASGTGFANRKFGHCVWQ-------------------SSLKQLSKEDSFIIPIKGR- 220
Query: 239 LLEQSSNLAAEPATVGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQ- 297
L++ N+ A+ SS T P +P+ +V V+
Sbjct: 221 -LKRYVNVLAQLKFGKDSSHG----QGDNCCDTQPRVPSELH-----------MVQDVED 264
Query: 298 -GSISK---FNKSSKPTSPAPSD---SSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAV 350
G+ + +SS + A S SS +IWKY ++PG+ +LI+AA C++R V
Sbjct: 265 LGNFVRRRLLQQSSNLAAIAASGVDGSSGNIWKYVFVVPGVALLLIVAAVMLCMCRSRGV 324
Query: 351 RTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEI 410
TI PW TGLSGQLQKAFVTGVPKLNR EL+TACEDFSNII+T CT+YKGTLSSGVEI
Sbjct: 325 TTIGPWTTGLSGQLQKAFVTGVPKLNRTELETACEDFSNIINTLDDCTVYKGTLSSGVEI 384
Query: 411 AVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPN 470
AVA+T I+SSKDW K EMA+RK++DTLSR+NHKNFVNL+GYCE+D+ F RMMVFEYAPN
Sbjct: 385 AVASTGISSSKDWSKRSEMAFRKKIDTLSRVNHKNFVNLLGYCEEDDIFVRMMVFEYAPN 444
Query: 471 GTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAA 530
G++FEHLH+KE++HLDWNAR RIIMGTAYCLQYM HELNPPVAHSNL+S IYLTDDYAA
Sbjct: 445 GSLFEHLHVKEVEHLDWNARTRIIMGTAYCLQYM-HELNPPVAHSNLTSAAIYLTDDYAA 503
Query: 531 KVAEICFTTIALPKSKVS--DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE 588
K+AEI KSK+S ++ E+S LPPLADPE+N+Y FGIL+LE ISGKLPY EE+
Sbjct: 504 KIAEINIWADLSSKSKISGNEESEHSELPPLADPESNVYCFGILLLETISGKLPYSEEQG 563
Query: 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648
+ WAA++LN+ R+ S +IDP+LKSFK NEL+ ICEVI++CI+ + RQRPTM ++ +
Sbjct: 564 -PLVNWAAEHLNDKRSISYLIDPTLKSFKNNELDIICEVIQDCIQPNPRQRPTMREVTSK 622
Query: 649 LRQVINISPEQAVPRLSPLWWAELEILSAETT 680
LR+VI ISP+ A PRLSPLWWAELEILS E T
Sbjct: 623 LREVIPISPDSATPRLSPLWWAELEILSVEAT 654
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518967|ref|XP_003629772.1| Leucine-rich repeat receptor-like protein kinase [Medicago truncatula] gi|355523794|gb|AET04248.1| Leucine-rich repeat receptor-like protein kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/714 (54%), Positives = 496/714 (69%), Gaps = 49/714 (6%)
Query: 5 WNSIGF--QFFCFLVLINNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCL 62
W+ G + + L+ I ++ CWSLN EG+AL EFR R+ISDP+G NWN NDS PC
Sbjct: 5 WDRFGLWLRIYIGLICIWGIRLCWSLNDEGIALWEFRVRIISDPYGALLNWNPNDSNPCK 64
Query: 63 WSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLE 122
W GV C++GKVQ+LD+ +SLEGTL P LGKL+ L+ LVL KN+FSG IPKELG+L L+
Sbjct: 65 WMGVHCVDGKVQILDLNGQSLEGTLTPHLGKLNHLKSLVLCKNNFSGTIPKELGDLDNLK 124
Query: 123 LLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE 182
LLDL N L+G IP EI R+ LK+LL+ +NK EG EL L S+ F D +S
Sbjct: 125 LLDLRENNLTGNIPAEIGRMLLLKQLLVHDNKIEGGGSQELGNMELPSKSLFSDNYSSPL 184
Query: 183 VAGIRSVNRKFG---------QYG------------------------FKIGEDSLHTNG 209
+ + NRKF Q+ FK+G+ + H
Sbjct: 185 TSLFQCKNRKFAHCIWYRDLKQWNEEKSLAVPIKGALKRYLKAMVLQLFKLGKAASHGYE 244
Query: 210 DHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSS 269
++ NLP S E+ NLI+ ARRKLL+QS+NLAA P + G + Q+ +P S SS
Sbjct: 245 ENYWGNLPSSDESEFGPDVSNLISSARRKLLDQSNNLAAAPYS-GGPTIQISVIPISISS 303
Query: 270 GTFPAIPTATKKHFPGPAASPPIVSAVQGSISKFNKSSKPTSP--APSDSSESIWKYFLI 327
G+FPA+P A KK +S P+ SA N++S+P S APS +WKY +I
Sbjct: 304 GSFPAVPDANKKQ---NQSSAPLHSAT--GFPHDNQTSQPNSANGAPS----KLWKYIII 354
Query: 328 IPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDF 387
G+ + I F + RA + I+PW+TG+SGQLQKAFVTGVPKLNR EL+TACEDF
Sbjct: 355 FFGVVFLAIFTVIMFCILRKRAAKVIKPWKTGISGQLQKAFVTGVPKLNRAELETACEDF 414
Query: 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFV 447
SNII++ CTIYKGTLSSGVEIAV +T +TSS+DW K+ EMAYR+++ +LSR+NHKNF
Sbjct: 415 SNIINSFEKCTIYKGTLSSGVEIAVDSTVVTSSEDWSKNMEMAYRRKIASLSRVNHKNFT 474
Query: 448 NLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE 507
NLIGYC+++EPF RMMV EYAPNG++FEHLH+KE++HLDW ARMR+IMGTAYCLQYMHH+
Sbjct: 475 NLIGYCDEEEPFTRMMVLEYAPNGSLFEHLHVKEIEHLDWMARMRVIMGTAYCLQYMHHD 534
Query: 508 LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL-PKSKVSDDIENSVLPPLADPETNI 566
LNPPV+HSNL+S I LTDD+AAKV+EI F + L P S V D+ + S LPP PET++
Sbjct: 535 LNPPVSHSNLNSVAILLTDDFAAKVSEISFGSNGLSPASTVGDESKKSELPPHQGPETDV 594
Query: 567 YSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICE 626
Y+FGIL+LEIISGKLPY EE+ L + WAA++LN+ RN C+IDP+L+SFK NEL+ ICE
Sbjct: 595 YNFGILLLEIISGKLPYSEEQGLLV-NWAAEHLNDKRNIGCLIDPTLESFKDNELDVICE 653
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILSAETT 680
VIKEC+++D R RPTM ++ +LR+V++ISP+QAVPRLSPLWWAELEILS E T
Sbjct: 654 VIKECVQSDQRLRPTMKEVTHKLREVLSISPDQAVPRLSPLWWAELEILSVEAT 707
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493602|ref|XP_003634634.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/721 (51%), Positives = 481/721 (66%), Gaps = 52/721 (7%)
Query: 1 MGGRWNSIGFQF----FCFLVLINNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKN 56
MG RWN GFQ F L+L+ + C SL++EG+ALL FR RV +DP F+NW+ +
Sbjct: 1 MGRRWNPFGFQLSGFGFAVLILLLKIHECVSLSIEGLALLRFRERVNNDPNRAFANWDPS 60
Query: 57 DSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG 116
D+ PC+W GV C++GKVQMLD+K LEG L P+LG+LS LR LVL +NHFSG IPKE+G
Sbjct: 61 DTNPCMWLGVHCVDGKVQMLDLKGLWLEGVLGPELGELSHLRSLVLYRNHFSGFIPKEIG 120
Query: 117 ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
L LELLDL NN LSG IP EI +PSLK LL+ NK S P+EL LL ELQ D+
Sbjct: 121 RLKMLELLDLRNNNLSGRIPAEIRMMPSLKHLLVSGNKIIPSKPVELD---LLPELQLDE 177
Query: 177 YLTSAEVAGIRSVNRKFGQYGF-------------------------------KIGEDSL 205
LT A G +N KFG + K G+ L
Sbjct: 178 DLTFASRTGRDCINTKFGHCIWESSLQHLKKAGSFIIPMVGTILQYLDVSPLSKFGKHYL 237
Query: 206 HTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSS-NLAAEPATVGSSSDQVIALP 264
+ ++ C NLP S+E +V+ +++N+ARR+ L QSS NL A P V S+ + P
Sbjct: 238 QGDKENCCHNLPSSAEQFIVKDVDDMVNIARRRRLLQSSYNLPAAP--VSSTELSQLTTP 295
Query: 265 TSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQGSISKFNKSSK-PTSPA--PSDSSESI 321
+ SSG FPA+ KH P P+ + S S+S N ++K P P PS
Sbjct: 296 FTLSSGAFPAV----NKHSPLPSNPS-LPSPPDLSLSAPNPNTKSPQKPVHQPSAHHSPE 350
Query: 322 WKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELD 381
YF IPG+ + ++ A + C+ +A + I PW+TG+SGQLQKA VTGV KLNR EL+
Sbjct: 351 RNYFHAIPGVVFLFVLCAVMLYICRKKAAKAIAPWKTGISGQLQKALVTGVSKLNRAELE 410
Query: 382 TACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI 441
ACEDFSNI+DT GC +YKGTLSSGVEIAVA+T I S K+W + E+A++K+++ LSRI
Sbjct: 411 AACEDFSNILDTFPGCKVYKGTLSSGVEIAVASTTIASFKEWSRHAEVAFKKRIEKLSRI 470
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501
NH+NFVN++GYC++DEPF RMMVFEYAPNG ++EHLH+KE++HLDWNAR+RIIMG AYCL
Sbjct: 471 NHRNFVNILGYCQEDEPFTRMMVFEYAPNGNLYEHLHVKEVEHLDWNARVRIIMGVAYCL 530
Query: 502 QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD--IENSVLPPL 559
++MHH LNPP+ H +L S I LT+D AAK+AEI F KSK++D+ E+S+L P
Sbjct: 531 EHMHHVLNPPLVHPHLHSSSILLTEDCAAKIAEISFWMDLATKSKIADEEQSEHSLLHPE 590
Query: 560 ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619
ADPE+N+YSFGI++LEIISGK+PY EE+ S+ WA +YLN + S MIDPSLKSFK
Sbjct: 591 ADPESNVYSFGIMLLEIISGKVPYNEEQG-SLVNWATEYLNGQKRISYMIDPSLKSFKNT 649
Query: 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILSAET 679
EL+ ICE+I+ECI + + RPTM DI+ LR VI +SP+QA P+LSPLWWAEL+ILS E
Sbjct: 650 ELDVICEIIQECINEEPKHRPTMKDIVSSLRNVIAVSPDQATPKLSPLWWAELQILSVEA 709
Query: 680 T 680
+
Sbjct: 710 S 710
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528328|ref|XP_003532756.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/683 (54%), Positives = 482/683 (70%), Gaps = 33/683 (4%)
Query: 1 MGGRWNSIGFQFFCFLVLIN--NLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDS 58
M W G ++ LI+ Q C SLN EG+ LLEFR R+ SDPF +NWN ND
Sbjct: 1 MESIWGPFGLWLRIYVGLISLWGTQQCSSLNDEGLTLLEFRGRITSDPFAALANWNPNDC 60
Query: 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL 118
PC W GVRC++G+VQ L + + SLEGTLAP+LGKLS L+ LVL KN FSG IPKELG+L
Sbjct: 61 NPCKWLGVRCVDGQVQSLVLPDLSLEGTLAPELGKLSHLKSLVLYKNSFSGTIPKELGDL 120
Query: 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYL 178
KLELLDL N L+G IP EI+R+ K LL+ +NKFEGS EL + L S
Sbjct: 121 DKLELLDLRGNDLTGCIPAEIARVLLSKNLLVCDNKFEGSDSQELRKLRLPS-------- 172
Query: 179 TSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRK 238
+ NRKF + FK+G+ + H + C NL S E+ VQ N+++ ARRK
Sbjct: 173 --------NNNNRKF-VHQFKLGKATPHAYEEKYCDNLTSSDESEFVQ---NVVDSARRK 220
Query: 239 LLEQSSNLAAEPATVGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAASP-PIVSAVQ 297
LL+QSSNLAAE + G + ++ ++P ++SSG FPA+P KK PA P P VS
Sbjct: 221 LLDQSSNLAAEHFS-GGPAIEISSIPIAQSSGAFPAVPDTNKKQNQSPAPLPSPSVSP-- 277
Query: 298 GSISKFNKSSKPTSPAPSDSSESIWKYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWR 357
N++S+ SP + +S +WKY +II G+ ++I+ + RA + I+PW+
Sbjct: 278 ----HVNQASQQNSP--NGASGKLWKYIIIITGVAVLVILVVIMLCIWRKRAAKVIKPWK 331
Query: 358 TGLSGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAI 417
TG+SGQLQKAF+TGVPKLNR EL+TACEDFSNII++ CT+YKGTLSSGVEIAV +T +
Sbjct: 332 TGISGQLQKAFITGVPKLNRGELETACEDFSNIINSFDECTVYKGTLSSGVEIAVDSTIV 391
Query: 418 TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
S+ DW K+ E AYRK++ LSR+NHKNF NLIGYC+++EPF RMMVFEYAPNG +FEHL
Sbjct: 392 ASANDWSKNMETAYRKKIAALSRVNHKNFTNLIGYCDEEEPFTRMMVFEYAPNGNLFEHL 451
Query: 478 HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537
H+KE++ LDW+ RMR+IMGTAYCLQYMHH+LNPPVAHSNL+S I LTDD+AAK++EI F
Sbjct: 452 HVKEVEPLDWSTRMRVIMGTAYCLQYMHHDLNPPVAHSNLNSIAILLTDDFAAKISEISF 511
Query: 538 TTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAAD 597
A + + ++S LPP ADPET++Y+FG+L+LEIISGKLPY EE+ + WAA+
Sbjct: 512 GKHAKTNTTGDESHKSSELPPQADPETDVYNFGVLLLEIISGKLPYSEEQG-HLANWAAE 570
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+LN+ ++ S +IDP+L+SFK EL+ ICEVIK+C+++D R R TM +I +LR+V+++SP
Sbjct: 571 HLNDKQSISYLIDPTLQSFKDEELDVICEVIKDCLQSDPRLRSTMKEITPRLREVLHVSP 630
Query: 658 EQAVPRLSPLWWAELEILSAETT 680
EQAVPRLSPLWWAELEILS E T
Sbjct: 631 EQAVPRLSPLWWAELEILSVEAT 653
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147777778|emb|CAN60298.1| hypothetical protein VITISV_017762 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/707 (51%), Positives = 474/707 (67%), Gaps = 38/707 (5%)
Query: 1 MGGRWNSIGFQF----FCFLVLINNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKN 56
MG RWN GFQ F L+L+ + C SL+LEG+ALL FR RV +DP F+NW+ +
Sbjct: 1 MGRRWNPFGFQLSGFGFAVLILLLKIHECVSLSLEGLALLRFRERVNNDPNRAFANWDPS 60
Query: 57 DSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG 116
D+ PC+W GV C++GKVQMLD+K LEG L P+LG+LS LR LVL +NHFSG IPKE+G
Sbjct: 61 DTNPCMWLGVHCVDGKVQMLDLKGLWLEGVLGPELGELSHLRSLVLYRNHFSGFIPKEIG 120
Query: 117 ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
L LELLDL NN LSG IP EI +PSLK LL+ NK IP + F LL E Q D+
Sbjct: 121 RLKMLELLDLRNNNLSGRIPAEIRMMPSLKHLLVSGNKI---IPPKHEEFDLLPEPQLDE 177
Query: 177 YLTSAE----------VAGIRSVNRKFGQYGFKIGEDSLHTNGDH-----SCANL--PGS 219
L S + + + + G D ++T H S +L GS
Sbjct: 178 NLVSGNKIIPSKPVELDLLLELQLDEDLTFASRTGRDCINTKFGHCIWESSLQHLKKAGS 237
Query: 220 SETHLVQHSQNLINVARRKLLEQSS-NLAAEPATVGSSSDQVIALPTSRSSGTFPAIPTA 278
+E +V+ +++N+ARR+ L QSS NL A A V S+ + P + SSG FPA+
Sbjct: 238 AEQFIVKDVDDMVNIARRRRLLQSSYNLPA--AAVSSTELSQLTTPFTLSSGAFPAV--- 292
Query: 279 TKKHFPGPAASPPIVSAVQGSISKFNKSSK-PTSPA--PSDSSESIWKYFLIIPGLFAVL 335
KH P P+ + S S+S N ++K P P PS YF IPG+ +
Sbjct: 293 -NKHSPLPSNPS-LPSPPDLSLSAPNPNTKSPQKPVHQPSAHHSPERNYFHAIPGVVFLF 350
Query: 336 IIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQS 395
++ A + C+ +A + I PW+TG+SGQLQKA VTGV KLNR EL+ ACEDFSNI+DT
Sbjct: 351 VLCAVMLYICRKKAGKAIAPWKTGISGQLQKALVTGVSKLNRAELEAACEDFSNILDTFP 410
Query: 396 GCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455
GC +YKGTLSSGVEIAVA+T I S K+W + E+A++K+++ LSRINH+NFVN++GYC++
Sbjct: 411 GCKVYKGTLSSGVEIAVASTTIASFKEWSRHAEVAFKKRIEKLSRINHRNFVNILGYCQE 470
Query: 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
DEPF RMMVFEYAPNG ++EHLH+KE++HLDWNAR+RIIMG AYCL++MHH LNPP+ H
Sbjct: 471 DEPFTRMMVFEYAPNGNLYEHLHVKEVEHLDWNARVRIIMGVAYCLEHMHHVLNPPLVHP 530
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD--IENSVLPPLADPETNIYSFGILM 573
+L S I LT+D AAKVAEI F KSK++D+ E+S+L P ADPE+N+YSFGI++
Sbjct: 531 HLHSSSILLTEDCAAKVAEISFWMDLATKSKIADEEQSEHSLLHPEADPESNVYSFGIML 590
Query: 574 LEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIK 633
LEIISGK+PY EE+ S+ WA +YLN + S MIDPSLKSFK EL+ ICE+I+ECI
Sbjct: 591 LEIISGKVPYNEEQG-SLVNWATEYLNGQKRISYMIDPSLKSFKNTELDVICEIIQECIN 649
Query: 634 TDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILSAETT 680
+ + RPTM DI+ LR VI +SP+QA P+LSPLWWAEL+ILS E +
Sbjct: 650 EEPKHRPTMKDIVSSLRNVIAVSPDQATPKLSPLWWAELQILSVEAS 696
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15242513|ref|NP_199396.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gi|332007922|gb|AED95305.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/694 (52%), Positives = 472/694 (68%), Gaps = 40/694 (5%)
Query: 1 MGGRWNSIGFQFFCFLVLINNLQGCWSLNLE--GMALLEFRTRVISDPFGVFSNWNKNDS 58
MG RWN IGFQF CF+ LI LQ SL+LE G LL+FR RV SDP G +NWN +D
Sbjct: 1 MGCRWNPIGFQFSCFMFLIITLQSRSSLSLESEGFVLLKFRARVDSDPHGTLANWNVSDH 60
Query: 59 TP-CLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGE 117
C W GV C++ KVQML++ SL GTLAP+L +LS+LR L+L KN SG IP E
Sbjct: 61 DHFCSWFGVTCVDNKVQMLNLSGCSLGGTLAPELSQLSELRSLILSKNKLSGDIPNEFAS 120
Query: 118 LTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD- 176
KLE LDL +N L+G++P E++++ + + LLL NKF G + ++ R L ++Q +
Sbjct: 121 FAKLEFLDLRDNNLNGVVPPELNKVLTPENLLLSGNKFAGFMTVKFLRLQSLYKVQMNKN 180
Query: 177 -YLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANL-PGSSETHLVQHSQNLINV 234
L+S + VNRK G + + ++G + N P +ET + +
Sbjct: 181 RELSSVSADVLDCVNRKLGYWVRR------ESHGKNYVVNYHPSENETSIFK-------- 226
Query: 235 ARRKLLEQSSNLAAEPA-TVGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIV 293
RR+LLE++SNLAA PA S S ++I + RSSG+FPA+ A K+ P S P
Sbjct: 227 -RRELLEETSNLAAMPAPDTPSPSPEIITIVFPRSSGSFPALTNAKKRIPPLIPPSSPPP 285
Query: 294 SAVQGSIS-----KFNKSSKPTSPAPSDSSESIWKYFLIIPGLFAVLIIAAAAFFTCQTR 348
+I+ KF + SK + +W Y +I F ++I A F + R
Sbjct: 286 LPTNNTIASDPPRKFEEKSK--------GFKDVWLYVVIGVAAFVAMLIIVAVIFFFRKR 337
Query: 349 AVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGV 408
AV++I PW+TGLSGQLQKAFVTGVPKLNR EL+TACEDFSNII+ G T+YKGTLSSGV
Sbjct: 338 AVKSIGPWKTGLSGQLQKAFVTGVPKLNRSELETACEDFSNIIEAFDGYTVYKGTLSSGV 397
Query: 409 EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468
EIAVA+TAI +++W ++ EM YR+++DT+SR+NHKNF+NLIGYCE+DEPFNRMMVFEYA
Sbjct: 398 EIAVASTAILETREWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVFEYA 457
Query: 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528
PNGT+FEHLH KEM+HLDWNAR RIIMGTAYCLQYM HELNPP++H+ L S IYLTDDY
Sbjct: 458 PNGTLFEHLHDKEMEHLDWNARTRIIMGTAYCLQYM-HELNPPISHTKLVSSAIYLTDDY 516
Query: 529 AAKVAEICFT--TIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEE 586
AAKV E+ F+ T + P+ +S D++ S+LP +PETN+YSFG+LMLEIISGKL EE
Sbjct: 517 AAKVGEVPFSGQTGSKPRKPMSGDLDQSLLPLPPEPETNVYSFGVLMLEIISGKLSDSEE 576
Query: 587 KELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E SI KWA+ YL E N MIDP+L ++K+ ELEAIC+V + C+K D QRP M ++
Sbjct: 577 -EGSILKWASKYL-ENDNLRDMIDPTLTTYKEEELEAICDVARHCLKLDESQRPKMKYVV 634
Query: 647 VQLRQVINISPEQAVPRLSPLWWAELEILSAETT 680
QL++VINIS EQA PRLSPLWWAELEILS+E T
Sbjct: 635 QQLKEVINISQEQATPRLSPLWWAELEILSSEAT 668
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 680 | ||||||
| TAIR|locus:2124102 | 678 | MRH1 "morphogenesis of root ha | 0.973 | 0.976 | 0.530 | 1.1e-174 | |
| TAIR|locus:2182915 | 553 | AT5G07150 [Arabidopsis thalian | 0.311 | 0.383 | 0.533 | 1e-103 | |
| TAIR|locus:2078436 | 499 | AT3G56050 [Arabidopsis thalian | 0.630 | 0.859 | 0.446 | 1.6e-96 | |
| TAIR|locus:2063146 | 489 | AT2G40270 [Arabidopsis thalian | 0.604 | 0.840 | 0.451 | 4.8e-94 | |
| TAIR|locus:2171233 | 484 | AT5G58540 [Arabidopsis thalian | 0.644 | 0.904 | 0.387 | 2.8e-82 | |
| TAIR|locus:2163056 | 664 | AT5G41180 [Arabidopsis thalian | 0.797 | 0.816 | 0.301 | 3.4e-61 | |
| TAIR|locus:2206179 | 592 | FEI1 "FEI 1" [Arabidopsis thal | 0.332 | 0.381 | 0.285 | 2.3e-45 | |
| TAIR|locus:2131518 | 1091 | AT4G26540 [Arabidopsis thalian | 0.370 | 0.230 | 0.317 | 6.5e-45 | |
| TAIR|locus:2020417 | 1101 | AT1G17230 [Arabidopsis thalian | 0.386 | 0.238 | 0.283 | 7e-44 | |
| TAIR|locus:2058759 | 589 | FEI2 "FEI 2" [Arabidopsis thal | 0.326 | 0.376 | 0.301 | 3.5e-43 |
| TAIR|locus:2124102 MRH1 "morphogenesis of root hair 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
Identities = 363/684 (53%), Positives = 458/684 (66%)
Query: 9 GFQFFCFLVLINNLQGCWSLNL--EGMALLEFRTRVISDPFGVFSNWNKNDSTP-CLWSG 65
GF F F LI LQ SL+L +G ALL+FR RV SDP G +NWN + C WSG
Sbjct: 5 GFHFPWFFFLIIGLQAPLSLSLTSQGSALLKFRARVNSDPHGTLANWNVSGINDLCYWSG 64
Query: 66 VRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXX 125
V C++GKVQ+LD+ SLEGTLAP+L +LSDLR L+L +NHFSG IPK
Sbjct: 65 VTCVDGKVQILDLSGYSLEGTLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLD 124
Query: 126 XSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185
N LSG IP E+S SLK LLL NKF + +++ R E++ + +A
Sbjct: 125 LRENDLSGQIPPELSNGLSLKHLLLSGNKFSDDMRIKIVRLQSSYEVRLKKSPKLSPLAV 184
Query: 186 IRSVNRKFGQYGFKIGEDSLHTNGDHSCA-NLPGSSETHLVQHSQNLINV---ARRKLLE 241
+ +NRK G + + + + +S L L RR+LLE
Sbjct: 185 LGCINRKLGHCVSR--NRIIQVKKVEAIVFRIKATSRRFLKAFPSFLEETDIYKRRELLE 242
Query: 242 QSSNLAAEPA-TVGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQGSI 300
++SNLAAEPA + S S +I + RSSG+FPA+ A K+ P PP+ S +GS
Sbjct: 243 ETSNLAAEPAPSAPSPSPGIITEASPRSSGSFPAVTNAKKRR---PPLVPPVPSPDKGST 299
Query: 301 SKFNKSSKPTSPAPSDSSESIWKYFLIIPGXXXXXXXXXXXXXTCQTRAVRTIRPWRTGL 360
S ++P S S+ +W Y +I C+ RAV++I PW+TGL
Sbjct: 300 SPDISKNQPQDNKQSKGSKHVWLYVVIAVASFVGLLIIVAVIFFCRKRAVKSIGPWKTGL 359
Query: 361 SGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSS 420
SGQLQKAFVTGVPKLNR EL+TACEDFSNII+T G T+YKGTLSSGVEIAVA+TAI S
Sbjct: 360 SGQLQKAFVTGVPKLNRSELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAES 419
Query: 421 KDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK 480
K+W ++ EMAYR+++DTLSRINHKNFVNLIGYCE+D+PFNRMMVFEYAPNGT+FEHLH K
Sbjct: 420 KEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDK 479
Query: 481 EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540
E +HLDW+ARMRIIMGTAYCLQ+MH +NPP+AH++ +S IYLTDDYAAKV+EI F
Sbjct: 480 ETEHLDWSARMRIIMGTAYCLQHMHG-MNPPMAHTDFNSSEIYLTDDYAAKVSEIPFNLE 538
Query: 541 AL--PKSKVSDDIENS--VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596
A PK VS D+E + +LPP +PE N++SFG+LMLEIISGKL + +E SIE+WA+
Sbjct: 539 ARLNPKKHVSGDLEQTSLLLPP--EPEANVHSFGVLMLEIISGKLSFSDEYG-SIEQWAS 595
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
YL E + MIDPSLK+FK+ ELE IC+VI+EC+KT+ RQRP+M D+ QL+QVINI+
Sbjct: 596 KYL-EKDDLGEMIDPSLKTFKEEELEVICDVIRECLKTEQRQRPSMKDVAEQLKQVINIT 654
Query: 657 PEQAVPRLSPLWWAELEILSAETT 680
PE+A PR SPLWWAELEILS+E T
Sbjct: 655 PEKATPRSSPLWWAELEILSSEAT 678
|
|
| TAIR|locus:2182915 AT5G07150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 605 (218.0 bits), Expect = 1.0e-103, Sum P(4) = 1.0e-103
Identities = 119/223 (53%), Positives = 161/223 (72%)
Query: 350 VRTIRPW-RTGLSGQLQKAFVTGVPKLNRLELDTACEDFSNII-DTQSGCTIYKGTLSSG 407
V+ I+PW TG SGQLQ TGVPKL EL+TACEDFSNII T S TIYKGTLS+G
Sbjct: 258 VKLIKPWGETGSSGQLQDVVTTGVPKLKLAELETACEDFSNIIGSTSSDATIYKGTLSTG 317
Query: 408 VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467
EIAV A A S +DW + E ++++ LS++NHKNF+N+IGYC +DEPFNRM+VFEY
Sbjct: 318 SEIAVLAVASGSLQDWSEDHETQFQEK--RLSQVNHKNFLNVIGYCHEDEPFNRMLVFEY 375
Query: 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP-PVAHSNLSSHCIYLTD 526
APNG++FEHLH ++ +HLDW R+RI+MG AYC+++MH+ LNP P++H+NL+S +YL
Sbjct: 376 APNGSLFEHLHDQDAEHLDWPMRLRIVMGIAYCMEHMHN-LNPKPISHTNLNSSSVYLAT 434
Query: 527 DYAAKVAEICF--TTIALPKSKVSDD---IENSVLPPLADPET 564
DYAAKV++ F +T P + VS ++ + + DP++
Sbjct: 435 DYAAKVSDFTFLSSTPLDPMTNVSSFGALLQEIITGKIPDPDS 477
|
|
| TAIR|locus:2078436 AT3G56050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 928 (331.7 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
Identities = 199/446 (44%), Positives = 281/446 (63%)
Query: 237 RKLLEQSSNLAAEPAT-VGSSSDQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPI--V 293
RKLL + N P T + + D+ +A T SS P P SPP V
Sbjct: 63 RKLLGRFRN----PYTHLNAFRDRPVARATPPSSSVSTRPDAKRSSTLPPPQKSPPAQHV 118
Query: 294 SAVQGSISKFNKSSKPTSPAPSDSSESIWKYFLIIPGXXXXXXXXXXXXXTCQTRAVRTI 353
SA + S TS + + S+ +I I G +++A +++
Sbjct: 119 SAPPPFVHHVTLPSL-TSSSKTSSNSTIPIVAGCIAGAVFILLLATGVFFF-KSKAGKSV 176
Query: 354 RPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVA 413
PWRTGLSGQLQK F+TGVPKL R E++ ACEDFSN+I + T++KGTLSSGVEIAVA
Sbjct: 177 NPWRTGLSGQLQKVFITGVPKLKRSEIEAACEDFSNVIGSCPIGTLFKGTLSSGVEIAVA 236
Query: 414 ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTV 473
+ A S+K+W + EM +RK+++ LS+INHKNFVNL+GYCE++EPF R++VFEYA NGTV
Sbjct: 237 SVATASAKEWTNNIEMQFRKKIEMLSKINHKNFVNLLGYCEEEEPFTRILVFEYASNGTV 296
Query: 474 FEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533
FEHLH KE +HLDW R+RI MG AYCL +MH L PP+ HSNL S + LT+DYA K+A
Sbjct: 297 FEHLHYKESEHLDWVMRLRIAMGIAYCLDHMHG-LKPPIVHSNLLSSSVQLTEDYAVKIA 355
Query: 534 EICFTTIALPKSKVSDDIENSVLPP-LADP--ETNIYSFGILMLEIISGKLPYCEEKELS 590
+ F + P S N+++ +++ E N++SFG+L+ E+++GKLP +K S
Sbjct: 356 DFNFGYLKGPSETESST--NALIDTNISETTQEDNVHSFGLLLFELMTGKLPESVQKGDS 413
Query: 591 IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650
I+ A +L + M+DP+++SF + ++E I EVIK CI+ D +QRP M ++ +LR
Sbjct: 414 IDTGLAVFLRG-KTLREMVDPTIESFDE-KIENIGEVIKSCIRADAKQRPIMKEVTGRLR 471
Query: 651 QVINISPEQAVPRLSPLWWAELEILS 676
++ +SP+ +P+LSPLWWAELE+LS
Sbjct: 472 EITGLSPDDTIPKLSPLWWAELEVLS 497
|
|
| TAIR|locus:2063146 AT2G40270 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 189/419 (45%), Positives = 272/419 (64%)
Query: 258 DQVIALPTSRSSGTFPAIPTATKKHFPGPAASPPIVSAVQGSISKFNKSSKPTSPAPSDS 317
++V+A T+ SS PA + K + P S+ Q +S + SP P +S
Sbjct: 77 NRVVAATTTPSSSPEPAPKHVSTK--ASTVSEPQKRSSTQ-DVSPSPSAPLANSPIPRNS 133
Query: 318 SESIWKYFLIIPGXXXXXXXXXXXXXTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNR 377
S+ + G ++A +T+ PWRTGLSGQLQK FVTG+P L R
Sbjct: 134 HSSV-PLVVGCVGGAFFLLLVATGLYFFTSKAGKTVNPWRTGLSGQLQKVFVTGIPVLKR 192
Query: 378 LELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDT 437
E++ ACEDFSN+I + ++KGTLSSGVEIAVA+ A T++KDW S E+ +RK+++
Sbjct: 193 SEIEAACEDFSNVIGSCPIGKLFKGTLSSGVEIAVASFATTTAKDWKDSTEIHFRKKIEM 252
Query: 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT 497
LS+INHKNF NL+GYCE+ EPF R+++FEYAPNG++FEHLH KE +HLDW R+RI MG
Sbjct: 253 LSKINHKNFANLLGYCEEKEPFTRILIFEYAPNGSLFEHLHYKESEHLDWGMRLRIAMGL 312
Query: 498 AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP 557
AYCL +MH +LNPP+AH+NL S + LT+DYA KV++ F + + ++ + ++ +
Sbjct: 313 AYCLDHMH-QLNPPIAHTNLVSSSLQLTEDYAVKVSDFSFGSSETETNINNNTVIDTHIS 371
Query: 558 PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617
L +PE NIYSFG+L+ E+I+GKL K S++ D+L + M+DP+L+S+
Sbjct: 372 AL-NPEDNIYSFGLLLFEMITGKLIESVNKPDSVDSSLVDFLRG-ETLAKMVDPTLESYD 429
Query: 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILS 676
++E I EVIK C++TD ++RPTM ++ LR++ +SP A P+LSPLWWAELE+LS
Sbjct: 430 A-KIENIGEVIKSCLRTDPKERPTMQEVTGWLREITGLSPNDATPKLSPLWWAELEVLS 487
|
|
| TAIR|locus:2171233 AT5G58540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 181/467 (38%), Positives = 269/467 (57%)
Query: 219 SSETHLVQHSQNLINVARRKLLE-----QSSNLAAEPATVGSSSDQVIALPTSRSSGTFP 273
SS+ H + S+ N R L++ + L A P + S+ + LP G
Sbjct: 38 SSQDHFLIQSRVYAN--HRSLIDTPLPGKDPALDASPPSPESAILKDPLLPPPPPEGN-- 93
Query: 274 AIPTATKKHFPGPAA-SPPIVSAVQGSISKFNKSSKPTSPAPSDSSESIWKYFLI-IPGX 331
P+ + P +PP ++ + ++ S P SP + S + Y ++ I G
Sbjct: 94 ETPSPPRSGVPTQTPETPPAITPLPVPLAPAPSPSPPVSPGTTKKSPKV--YMIVGIVGG 151
Query: 332 XXXXXXXXXXXXTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDFSNII 391
TR + I+PW SGQL+ +T VP+L EL ACEDFSN+I
Sbjct: 152 VFTVSVALIIIFLILTRKI-PIKPWTN--SGQLRDDLITDVPRLQLSELQAACEDFSNVI 208
Query: 392 DTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG 451
+ S TIYKGTLS+G EIAV + S DW + + +++ LS+++HKNF+N+IG
Sbjct: 209 GSFSDGTIYKGTLSTGAEIAVVSIVAGSRSDWSTTMDTQLLQKMHNLSKVDHKNFLNVIG 268
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP 511
YC ++EPF RM+VFEYAPNG++ EHLH + ++HLDW R+RI+MG AYCL++MH+ LNPP
Sbjct: 269 YCLEEEPFKRMLVFEYAPNGSLSEHLHSQYVEHLDWPTRLRIVMGIAYCLEHMHN-LNPP 327
Query: 512 VAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGI 571
+ SNL S +YLT+D AAKV++ P SK +N + P L DP TN+++FG
Sbjct: 328 ILLSNLDSSSVYLTEDNAAKVSDFSVINSIFP-SKEGSSSKNLLEPSLLDPHTNVFNFGA 386
Query: 572 LMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631
++ EIISGKLP + L EP+ ++DP+LK+F++N +E + EV+++C
Sbjct: 387 VLFEIISGKLPDPDSMLL-----------EPKPTRDIVDPTLKTFQENVVERLLEVVRQC 435
Query: 632 IKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILSAE 678
+ QRPTM +++V+LR++ I + A+PRLSP WW ELEI+S E
Sbjct: 436 LNPYSDQRPTMREVVVKLREITGIEADAAMPRLSPRWWTELEIISTE 482
|
|
| TAIR|locus:2163056 AT5G41180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 175/580 (30%), Positives = 284/580 (48%)
Query: 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF-DDYLTSAEVAG 185
S + G + E+ ++ L+ L+L N G+IP E+ + L L +++LT A
Sbjct: 82 SGTSMRGFLVPELGQITYLQELILRGNILMGTIPKEIGKLKKLKILDLGNNHLTGPIPAE 141
Query: 186 IRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHS-QNLINVARRKLLEQSS 244
I ++R + + L NL E + ++ + I +A + + +S
Sbjct: 142 IGKLSRI---KTINLQSNGLIGKLPPEIGNLKHLKELLIGRNRLRGSIPIAAKTSKKYAS 198
Query: 245 NLAAEPATVGSSS-DQVIALPTSRSSGTFPA-IPTATKKHFPGPAASPPIVSAVQGSISK 302
N +A + + SS +V + G P+ + F G V Q +S+
Sbjct: 199 NPSANISGLCKSSLFKVADFSYNFFEGRVPSCLDYLPITSFQGNCMKTMDVK--QRPLSE 256
Query: 303 FNKSSKPTSPAPSDSSESIW-KYFLIIPGXXXXXXXXXXXXXTCQTRAVRT--IRPWRTG 359
+ + + +S W + F I+ G C ++ I PW+
Sbjct: 257 CARLAVTVAKKKHRASRQTWLRNFEIVTGSSVGLLFLVVMFSACSLCKIKRSLIVPWKKS 316
Query: 360 LSGQ------LQKAFVTGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVA 413
S + + + V + R EL+ ACEDFSNIID+ + IYKGT+ G EIAV
Sbjct: 317 ASEKEKFTVYVDSEMLKDVSRYTRQELEVACEDFSNIIDSSAESQIYKGTIKGGTEIAVI 376
Query: 414 ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTV 473
+ + ++W E+ ++++V L+R+NH+N L+GYC++ PF RM+VFEYA NGT+
Sbjct: 377 SLCV-KEENWTGYLELNFQREVAALARLNHENAGKLLGYCKESTPFTRMLVFEYASNGTL 435
Query: 474 FEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533
++HLH + + W RM+I++G A L+Y+H EL+PP S LSS +YLT+D+ K+
Sbjct: 436 YDHLHYADGSLVSWAKRMKIVIGIARGLKYLHTELHPPFTVSELSSTAVYLTEDFTPKLV 495
Query: 534 EI-CFTTIALPKSKVSDDIENS----VLPPLA-----DPETNIYSFGILMLEIISGKLPY 583
+ C+ I + K +I N VLP D + NIYSFGIL+LEI+SG+ Y
Sbjct: 496 DFECWKIIQVRSEKNLKNICNEGAICVLPNAMEHRDMDLQGNIYSFGILLLEIVSGRPSY 555
Query: 584 CEEKELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP-- 640
C+++ +E W + L P + ++DP LK FKQ ELEA+CEV +C+ D ++
Sbjct: 556 CQDRGCLVE-WVREKNLGAPDVMASLVDPELKHFKQKELEAVCEVASQCLNLDQNEKDKD 614
Query: 641 ----TMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILS 676
++ + L I +S A + S L WAEL + S
Sbjct: 615 KLSCSIQALCETLESRITVSIS-AEFKSSSLAWAELALAS 653
|
|
| TAIR|locus:2206179 FEI1 "FEI 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 323 (118.8 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 69/242 (28%), Positives = 136/242 (56%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ ++++ L I H+ VNL GYC + P +++++++Y P G++ E LH++ + LDW++R
Sbjct: 347 FERELEILGSIKHRYLVNLRGYC--NSPTSKLLLYDYLPGGSLDEALHVERGEQLDWDSR 404
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK-SKVSD 549
+ II+G A L Y+HH+ +P + H ++ S I L + A+V++ + + S ++
Sbjct: 405 VNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT 464
Query: 550 DIENSV--LPP------LADPETNIYSFGILMLEIISGKLPYCE---EKELSIEKWAADY 598
+ + L P A +T++YSFG+L+LE++SGK P EK L++ W
Sbjct: 465 IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFL 524
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR-QVINISP 657
++E R ++DP+ + + L+A+ + +C+ +RPTM+ ++ L +V+ P
Sbjct: 525 ISEKRPRD-IVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLLESEVMTPCP 583
Query: 658 EQ 659
+
Sbjct: 584 SE 585
|
|
| TAIR|locus:2131518 AT4G26540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 264 (98.0 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 86/271 (31%), Positives = 133/271 (49%)
Query: 25 CWSLNLEGMALLEFRTRV-ISDPFGVFSNWNKNDSTPCLWSGVRC-LNGKVQMLDMKERS 82
C+SL+ +G ALL +++++ IS FS+W+ D++PC W GV+C G+V + +K
Sbjct: 22 CFSLDQQGQALLSWKSQLNISGD--AFSSWHVADTSPCNWVGVKCNRRGEVSEIQLKGMD 79
Query: 83 LEGTL-APDLGKLSDLRFLVLQKNHFSGVIPKXXXXXXXXXXXXXSNNKLSGIIPVEISR 141
L+G+L L L L L L + +GVIPK S+N LSG IPVEI R
Sbjct: 80 LQGSLPVTSLRSLKSLTSLTLSSLNLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFR 139
Query: 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIG 201
L LK L L N EG IP+E+ + L EL D S E+ RS+ + G
Sbjct: 140 LKKLKTLSLNTNNLEGHIPMEIGNLSGLVELMLFDNKLSGEIP--RSIGELKNLQVLRAG 197
Query: 202 EDSLHTNGD-----HSCANLP--GSSETHLV-QHSQNLINVARRKLLEQSSNLAAEPAT- 252
+ + G+ +C NL G +ET L + ++ N+ R + + ++L + P
Sbjct: 198 GNK-NLRGELPWEIGNCENLVMLGLAETSLSGKLPASIGNLKRVQTIAIYTSLLSGPIPD 256
Query: 253 -VGSSSD-QVIALPTSRSSGTFPAIPTATKK 281
+G ++ Q + L + SG+ P KK
Sbjct: 257 EIGYCTELQNLYLYQNSISGSIPTTIGGLKK 287
|
|
| TAIR|locus:2020417 AT1G17230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 289 (106.8 bits), Expect = 7.0e-44, Sum P(2) = 7.0e-44
Identities = 81/286 (28%), Positives = 140/286 (48%)
Query: 383 ACEDFS-NIIDTQSGC-TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR 440
A +FS +++ + C T+YK +S G IAV +S+ S + ++R ++ TL +
Sbjct: 795 ATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKL---NSRGEGASSDNSFRAEISTLGK 851
Query: 441 INHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHL-DWNARMRIIMGTAY 499
I H+N V L G+C + ++++EY G++ E L E + L DWNAR RI +G A
Sbjct: 852 IRHRNIVKLYGFCYHQN--SNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGAAE 909
Query: 500 CLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT-IALPKSKVSDDIENS---V 555
L Y+HH+ P + H ++ S+ I L + + A V + I L SK + S +
Sbjct: 910 GLCYLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYGYI 969
Query: 556 LPPLA-----DPETNIYSFGILMLEIISGKLPYCE-EKELSIEKWAADYLNE--P--RNF 605
P A + +IYSFG+++LE+I+GK P E+ + W + P F
Sbjct: 970 APEYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTIEMF 1029
Query: 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
+D + K +E+ + ++ C RPTM +++ + +
Sbjct: 1030 DARLDTNDKR-TVHEMSLVLKIALFCTSNSPASRPTMREVVAMITE 1074
|
|
| TAIR|locus:2058759 FEI2 "FEI 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 306 (112.8 bits), Expect = 3.5e-43, Sum P(3) = 3.5e-43
Identities = 72/239 (30%), Positives = 136/239 (56%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ ++++ L I H+ VNL GYC + P +++++++Y P G++ E LH K + LDW++R
Sbjct: 345 FERELEILGSIKHRYLVNLRGYC--NSPTSKLLLYDYLPGGSLDEALH-KRGEQLDWDSR 401
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK-SKVSD 549
+ II+G A L Y+HH+ +P + H ++ S I L + A+V++ + + S ++
Sbjct: 402 VNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITT 461
Query: 550 DIENSV--LPP------LADPETNIYSFGILMLEIISGKLPYCE---EKELSIEKWAADY 598
+ + L P A +T++YSFG+L+LE++SGKLP EK +I W
Sbjct: 462 IVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFL 521
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
++E R ++D S + ++ L+A+ + +C+ + +RPTM+ + VQL + ++P
Sbjct: 522 ISENRAKE-IVDLSCEGVERESLDALLSIATKCVSSSPDERPTMHRV-VQLLESEVMTP 578
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| C0LGU7 | Y5458_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.5204 | 0.9794 | 0.9582 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 680 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-24 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-19 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 4e-16 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-14 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-14 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 2e-14 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-14 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-13 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-12 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 1e-11 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-10 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 8e-10 | |
| pfam08263 | 42 | pfam08263, LRRNT_2, Leucine rich repeat N-terminal | 8e-10 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-09 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-09 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 3e-09 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-09 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-08 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-08 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-08 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 5e-08 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-08 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 4e-07 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 5e-07 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 1e-06 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-06 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 2e-06 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-06 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 4e-06 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 6e-06 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 8e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-05 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-05 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 5e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 5e-05 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 7e-05 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 7e-05 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 8e-05 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 1e-04 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 1e-04 | |
| smart00750 | 176 | smart00750, KIND, kinase non-catalytic C-lobe doma | 1e-04 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-04 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-04 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 3e-04 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 4e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 4e-04 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 4e-04 | |
| pfam12799 | 43 | pfam12799, LRR_4, Leucine Rich repeats (2 copies) | 5e-04 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 6e-04 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 6e-04 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 6e-04 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 7e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 7e-04 | |
| pfam12799 | 43 | pfam12799, LRR_4, Leucine Rich repeats (2 copies) | 8e-04 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 9e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.001 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 0.001 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 0.002 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 0.002 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.003 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 0.003 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 0.003 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (270), Expect = 4e-24
Identities = 168/648 (25%), Positives = 249/648 (38%), Gaps = 128/648 (19%)
Query: 68 CLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127
C +G + L + SLEG + LG LR + LQ N FSG +P E +L + LD+S
Sbjct: 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDIS 436
Query: 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP----------LELSR----------FT 167
NN L G I +PSL+ L L NKF G +P L+LSR
Sbjct: 437 NNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLG 496
Query: 168 LLSEL-QFD-----------DYLTSAE--VAGIRSVNRKFGQYGFKIGEDSLHTNGDHSC 213
LSEL Q D L+S + V+ S N+ GQ E + + D S
Sbjct: 497 SLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQ 556
Query: 214 ANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSGTFP 273
L G NL NV + S N GS LP S+G F
Sbjct: 557 NQLSGEIPK-------NLGNVESLVQVNISHNHLH-----GS-------LP---STGAFL 594
Query: 274 AIPTATKKHFPGPAASPPIVSAVQGSIS--KFNKSSKPTSPAPSDSSESIWKYFLIIPGL 331
AI SAV G+I + +S + S W Y G
Sbjct: 595 AINA----------------SAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGA 638
Query: 332 FAVLIIAAAAFFTCQTRAVRTIR-------PWRTGLSGQLQKAFVTGVPKLNRLELDTAC 384
F VL + A F + R ++ W F + V K + +
Sbjct: 639 FLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQF-------FDSKVSKSITINDILSS 691
Query: 385 EDFSNIIDTQSGCTIYKG-TLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH 443
N+I YKG ++ +G++ V +S + S E+A + ++ H
Sbjct: 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIA------DMGKLQH 742
Query: 444 KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503
N V LIG C ++ ++ EY + E L +L W R +I +G A L++
Sbjct: 743 PNIVKLIGLCRSEK--GAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRF 795
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPE 563
+H +P V NLS I + + ++LP + D + + PE
Sbjct: 796 LHCRCSPAVVVGNLSPEKIIIDGKDEPHL------RLSLPGL-LCTDTKCFISSAYVAPE 848
Query: 564 T----------NIYSFGILMLEIISGKLPYCEEKEL--SIEKWAADYLNEPRNFSCMIDP 611
T +IY FG++++E+++GK P E + SI +WA Y + IDP
Sbjct: 849 TRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWAR-YCYSDCHLDMWIDP 907
Query: 612 SLK---SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
S++ S QNE+ + + C TD RP ND++ L S
Sbjct: 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 3e-19
Identities = 67/187 (35%), Positives = 92/187 (49%), Gaps = 36/187 (19%)
Query: 35 LLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRC----------LNGK------------ 72
LL F++ I+DP SNWN + + CLW G+ C L+GK
Sbjct: 34 LLSFKSS-INDPLKYLSNWNSS-ADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFR 91
Query: 73 ---VQMLDMKERSLEGTLAPDLGKLS-DLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128
+Q +++ L G + D+ S LR+L L N+F+G IP+ G + LE LDLSN
Sbjct: 92 LPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSN 149
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRS 188
N LSG IP +I SLK L LG N G IP L+ L+ L+F LT A +
Sbjct: 150 NMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTN---LTSLEF---LTLASNQLVGQ 203
Query: 189 VNRKFGQ 195
+ R+ GQ
Sbjct: 204 IPRELGQ 210
|
Length = 968 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 78.3 bits (194), Expect = 4e-16
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 55/276 (19%)
Query: 398 TIYKGTL---SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCE 454
+YKGTL G E VA + + + + ++ + +++H N V L+G C
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGAS--EEEREEFLEEASIMKKLSHPNIVRLLGVCT 71
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
EP +V EY P G + + L + L +++ + A ++Y+ + H
Sbjct: 72 QGEPL--YIVTEYMPGGDLLDFLRKHG-EKLTLKDLLQMALQIAKGMEYLE---SKNFVH 125
Query: 515 SNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----ENSVLPP--LADPE----- 563
+L++ +T++ K+++ F L + DD LP +A PE
Sbjct: 126 RDLAARNCLVTENLVVKISD--F---GLSRDIYEDDYYRKRGGGKLPIKWMA-PESLKDG 179
Query: 564 -----TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNE----PRNFSCMIDPSL 613
++++SFG+L+ EI + G+ PY +S E+ + L + PR +C
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLGEQPY---PGMSNEE-VLELLEDGYRLPRPENCP----- 230
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
+ + E++ +C D RPT ++++ L
Sbjct: 231 --------DELYELMLQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 2e-15
Identities = 45/260 (17%), Positives = 96/260 (36%), Gaps = 66/260 (25%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T+Y +G ++A+ K+ S ++++ L ++NH N V L G ED+
Sbjct: 8 TVYLARDKKTGKKVAIK----IIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE 63
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+V EY G++ + L + L + +RI++ L+Y+H + H +
Sbjct: 64 NHL--YLVMEYCEGGSLKDLLK-ENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRD 117
Query: 517 LSSHCIYLTDDYA-AKVAEICFTTIALPKSKVSDDIENSV--LPP-------LADPETNI 566
L I L D K+A+ + + + I + + P +++I
Sbjct: 118 LKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDI 177
Query: 567 YSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICE 626
+S G+++ EL + +
Sbjct: 178 WSLGVILY---------------------------------------------ELPELKD 192
Query: 627 VIKECIKTDLRQRPTMNDII 646
+I++ ++ D +RP+ +I+
Sbjct: 193 LIRKMLQKDPEKRPSAKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 8e-15
Identities = 41/98 (41%), Positives = 57/98 (58%)
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGII 135
LD+ +L G + LG L +L++L L +N SG IP + L KL LDLS+N LSG I
Sbjct: 241 LDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300
Query: 136 PVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
P + +L +L+ L L +N F G IP+ L+ L LQ
Sbjct: 301 PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQ 338
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 1e-14
Identities = 40/97 (41%), Positives = 53/97 (54%)
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGII 135
LD+ L G + D+G S L+ L L N G IP L LT LE L L++N+L G I
Sbjct: 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQI 204
Query: 136 PVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
P E+ ++ SLK + LG N G IP E+ T L+ L
Sbjct: 205 PRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHL 241
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 1e-14
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 53 WNKNDSTPCL--WSGVRCLNGK------VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQK 104
WN + P WSG C + L + + L G + D+ KL L+ + L
Sbjct: 392 WNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSG 451
Query: 105 NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP 160
N G IP LG +T LE+LDLS N +G IP + +L SL+ L L N G +P
Sbjct: 452 NSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
|
Length = 623 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 73.7 bits (182), Expect = 1e-14
Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 45/272 (16%)
Query: 397 CTIYKGTL---SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC 453
+YKGTL G E+ VA + + Q + ++ + +++H N V L+G C
Sbjct: 13 GEVYKGTLKGKGDGKEVEVAVKTLKEDAS--EQQIEEFLREARIMRKLDHPNIVKLLGVC 70
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513
++EP M+V EY P G + ++L L + + + A ++Y+ +
Sbjct: 71 TEEEPL--MIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFI 125
Query: 514 HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPL-----ADPE----- 563
H +L++ + ++ K+++ F L + DD L A PE
Sbjct: 126 HRDLAARNCLVGENLVVKISD--F---GLSRDLYDDDYYKVKGGKLPIRWMA-PESLKEG 179
Query: 564 -----TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617
++++SFG+L+ EI + G+ PY + ++ P+ +C P
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNC---P------ 230
Query: 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
+ +++ +C D RPT ++++ L
Sbjct: 231 ----PELYKLMLQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 73.3 bits (181), Expect = 2e-14
Identities = 59/281 (20%), Positives = 112/281 (39%), Gaps = 58/281 (20%)
Query: 399 IYKGTLS--SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+YKG L G VA + + + + K+ + ++ H N V L+G C ++
Sbjct: 11 VYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLGHPNVVRLLGVCTEE 68
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIK-------EMDHLDWNARMRIIMGTAYCLQYMHHELN 509
EP +V EY G + ++L E L + + A ++Y+ +
Sbjct: 69 EPL--YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-- 124
Query: 510 PPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----ENSVLPP--LADPE 563
H +L++ + +D K+++ F L + DD LP +A PE
Sbjct: 125 -KFVHRDLAARNCLVGEDLVVKISD--F---GLSRDVYDDDYYRKKTGGKLPIRWMA-PE 177
Query: 564 ----------TNIYSFGILMLEIIS-GKLPYCE--EKELSIEKWAADY-LNEPRNFSCMI 609
++++SFG+L+ EI + G PY +E+ +E Y L +P
Sbjct: 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEV-LEYLRKGYRLPKPEYCP--- 233
Query: 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650
+ + E++ C + D RPT ++++ +L
Sbjct: 234 ------------DELYELMLSCWQLDPEDRPTFSELVERLE 262
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 72.9 bits (180), Expect = 3e-14
Identities = 52/272 (19%), Positives = 110/272 (40%), Gaps = 46/272 (16%)
Query: 397 CTIYKGTL---SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC 453
+YKG L ++ VA + + Q + ++ + +++H N V L+G C
Sbjct: 13 GEVYKGKLKGKGGKKKVEVAVKTLKEDAS--EQQIEEFLREARIMRKLDHPNVVKLLGVC 70
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513
++EP +V EY G + +L L + + + A ++Y+ +
Sbjct: 71 TEEEPL--YIVMEYMEGGDLLSYLRKNR-PKLSLSDLLSFALQIARGMEYLESK---NFI 124
Query: 514 HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPL-----ADPE----- 563
H +L++ + ++ K+++ F L + DD L A PE
Sbjct: 125 HRDLAARNCLVGENLVVKISD--F---GLSRDLYDDDYYRKRGGKLPIRWMA-PESLKEG 178
Query: 564 -----TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617
++++SFG+L+ EI + G+ PY + ++ + P+ +C P
Sbjct: 179 KFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNC---P------ 229
Query: 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
+ +++ +C D RPT ++++ L
Sbjct: 230 ----PELYDLMLQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 6e-14
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
++ L + L G + +LG++ L+++ L N+ SG IP E+G LT L LDL N L
Sbjct: 189 SLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNL 248
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEV 183
+G IP + L +L+ L L NK G IP + L L D S E+
Sbjct: 249 TGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300
|
Length = 968 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 70.6 bits (174), Expect = 1e-13
Identities = 48/254 (18%), Positives = 85/254 (33%), Gaps = 66/254 (25%)
Query: 420 SKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHI 479
K +K +++ L ++ H N V L ED++ +V EY G +F+ +
Sbjct: 33 KKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY--LVMEYCEGGDLFD--LL 88
Query: 480 KEMDHLD-WNAR--MR-IIMGTAYCLQYMHHELNPPVAH-----SNL---SSHCIYLTD- 526
K+ L AR +R I+ Y H + H N+ + L D
Sbjct: 89 KKRGRLSEDEARFYLRQILSALEYL-----HSKG--IVHRDLKPENILLDEDGHVKLADF 141
Query: 527 DYAAKVAEICFTT------------IALPK--SKVSDDIENSVLPPLADPETNIYSFGIL 572
A ++ T + L K K D I+S G++
Sbjct: 142 GLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVD----------------IWSLGVI 185
Query: 573 MLEIISGKLPYCEEKELS-IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631
+ E+++GK P+ + +L + K I P K I++
Sbjct: 186 LYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDL-----------IRKL 234
Query: 632 IKTDLRQRPTMNDI 645
+ D +R T +
Sbjct: 235 LVKDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 4e-13
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+++LD+ L G + L L+ L FL L N G IP+ELG++ L+ + L N LS
Sbjct: 166 LKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
G IP EI L SL L L N G IP L L LQ+
Sbjct: 226 GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN---LKNLQY 264
|
Length = 968 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T+YK +G +AV S K ++ R+++ L R++H N V LI ED
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSK---KDQTARREIRILRRLSHPNIVRLIDAFEDK 70
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+ + +V EY G +F++L L + +I + L+Y+H + H +
Sbjct: 71 D--HLYLVMEYCEGGDLFDYLSRG--GPLSEDEAKKIALQILRGLEYLHSN---GIIHRD 123
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI---------ENSVLPPLADPETNIY 567
L I L ++ K+A+ L S E + P+ +++
Sbjct: 124 LKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVW 183
Query: 568 SFGILMLEIISGKLPYCEEKELS----IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEA 623
S G+++ E+++GK P+ E L I + L K
Sbjct: 184 SLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDL------- 236
Query: 624 ICEVIKECIKTDLRQRPTMNDI 645
IK+C+ D +RPT +I
Sbjct: 237 ----IKKCLNKDPSKRPTAEEI 254
|
Length = 260 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 1e-11
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 401 KGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460
KG G E V A+ +KD ++ + +R+++D +++HKN V L+G C + EP
Sbjct: 27 KGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH- 83
Query: 461 RMMVFEYAPNGTVFEHLHI---KEMDHLDWNARMRIIMGTAYCL-QYMHHELNPPVAHSN 516
M+ EY G + + L K+ + + + M H N H +
Sbjct: 84 -YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRD 142
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD---IENSVLP-----PLADPE----- 563
L++ ++ KV + ++L K + + + N+++P P A E
Sbjct: 143 LAARNCLVSSQREVKV-----SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFST 197
Query: 564 -TNIYSFGILMLEIIS-GKLPY 583
++++SFG+LM E+ + G+LP+
Sbjct: 198 KSDVWSFGVLMWEVFTQGELPF 219
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 61.4 bits (150), Expect = 2e-10
Identities = 52/268 (19%), Positives = 96/268 (35%), Gaps = 56/268 (20%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
++Y +G +AV + ++ + + A +++ LS + H N V G D+
Sbjct: 15 SVYLALDKDTGELMAVKSVELSGD---SEEELEALEREIRILSSLQHPNIVRYYGSERDE 71
Query: 457 EPFNRMMVFEYAPNGTV------FEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
E + EY G++ F L + R I+ G L Y+ H
Sbjct: 72 EKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKY---TRQ-ILEG----LAYL-HSNG- 121
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV-----------LPP- 558
+ H ++ I + D K+A+ F +K DIE + P
Sbjct: 122 -IVHRDIKGANILVDSDGVVKLAD--FGC-----AKRLGDIETGEGTGSVRGTPYWMAPE 173
Query: 559 -----LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613
+I+S G ++E+ +GK P+ E + EP +
Sbjct: 174 VIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEA 233
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPT 641
K F +++C++ D ++RPT
Sbjct: 234 KDF-----------LRKCLRRDPKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 8e-10
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 399 IYKGTLSS-GVEIAVAATAITSSKDW-LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+YKG L+ ++ + AI + K+ + +R++ + +S + H N V L+G C +
Sbjct: 21 VYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA--RMRIIMGTAYCLQYMHHELNPPVAH 514
+P M+FEY +G + E L ++ H D A + + C ++H +
Sbjct: 81 QPT--CMLFEYLAHGDLHEFL-VRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGM 137
Query: 515 SNLSSHCIYLTDDYAAK---VAE---ICFTTIALPKSKVSDD----IENSVLP-----PL 559
LSSH ++ D AA+ V E + + L + S D S+LP P
Sbjct: 138 EYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPE 196
Query: 560 A------DPETNIYSFGILMLEIIS-GKLPYC 584
A E++I+SFG+++ EI S G PY
Sbjct: 197 AILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|219766 pfam08263, LRRNT_2, Leucine rich repeat N-terminal domain | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 8e-10
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 28 LNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRC 68
LN + ALL F++ + DP G S+WN + S PC W+GV C
Sbjct: 1 LNDDRDALLAFKSSLNGDPSGALSSWNPSSSDPCSWTGVTC 41
|
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats. Length = 42 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-09
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 60 PCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELT 119
P S +R +Q +++ S+ G + P LG ++ L L L N F+G IP+ LG+LT
Sbjct: 435 PNDISKLR----HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLT 490
Query: 120 KLELLDLSNNKLSGIIPVEISRLP 143
L +L+L+ N LSG +P +
Sbjct: 491 SLRILNLNGNSLSGRVPAALGGRL 514
|
Length = 623 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 45/250 (18%)
Query: 416 AITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFE 475
A+ KD + + A+ + ++ + H N V L+G P +V EY G++ +
Sbjct: 33 AVKCLKDDSTAAQ-AFLAEASVMTTLRHPNLVQLLGVVLQGNPL--YIVTEYMAKGSLVD 89
Query: 476 HLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535
+L + + ++ + ++Y+ + H +L++ + +++D AKV++
Sbjct: 90 YLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSD- 145
Query: 536 CFTTIALPKSKVSDDIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
L K + S ++ LP PE ++++SFGIL+ EI S G++PY
Sbjct: 146 ----FGLAK-EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
Query: 584 CEE--KELS--IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQR 639
K++ +EK Y E C P + +V+K+C + D +R
Sbjct: 201 PRIPLKDVVPHVEK---GYRMEAPE-GC---P----------PEVYKVMKDCWELDPAKR 243
Query: 640 PTMNDIIVQL 649
PT + QL
Sbjct: 244 PTFKQLREQL 253
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 31/231 (13%)
Query: 433 KQVDTLSRINHKNFVNLIGYCED--DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
++ L RI+ N + + G+ D D+ ++ EY G + E L KE D L + +
Sbjct: 67 NEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLD-KEKD-LSFKTK 124
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC---FTTIALPKSK- 546
+ + + L ++ N P + NL+S +T++Y K+ IC ++ P K
Sbjct: 125 LDMAIDCCKGLYNLYKYTNKP--YKNLTSVSFLVTENYKLKI--ICHGLEKILSSPPFKN 180
Query: 547 ------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600
S + N + + +IYS G+++ EI +GK+P+ + L+ ++ +N
Sbjct: 181 VNFMVYFSYKMLNDIFSEYTI-KDDIYSLGVVLWEIFTGKIPF---ENLTTKEIYDLIIN 236
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
+ N S + + +++ C D +RP + +I+ L
Sbjct: 237 K--NNSLKLPLDCPLEIKC-------IVEACTSHDSIKRPNIKEILYNLSL 278
|
Length = 283 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 4e-09
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+++L + + G + L L L+ L L N FSG IPK LG+ L +LDLS N L+
Sbjct: 310 LEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELS 164
G IP + +L +L+L +N EG IP L
Sbjct: 370 GEIPEGLCSSGNLFKLILFSNSLEGEIPKSLG 401
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 7e-09
Identities = 33/79 (41%), Positives = 42/79 (53%)
Query: 82 SLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISR 141
+L G + ++G L+ L L L N+ +G IP LG L L+ L L NKLSG IP I
Sbjct: 223 NLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS 282
Query: 142 LPSLKRLLLGNNKFEGSIP 160
L L L L +N G IP
Sbjct: 283 LQKLISLDLSDNSLSGEIP 301
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 1e-08
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 109 GVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTL 168
G IP ++ +L L+ ++LS N + G IP + + SL+ L L N F GSIP L + T
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 169 LSELQFDDYLTSAEVAG 185
L L + S V
Sbjct: 492 LRILNLNGNSLSGRVPA 508
|
Length = 623 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 2e-08
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 97 LRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKF 155
L+ L L N + + L L++LDLS N L+ I P S LPSL+ L L N
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 4e-08
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGII 135
LD+ + SL G + + +L +L L L N+F+G IP L L +L++L L +NK SG I
Sbjct: 289 LDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEI 348
Query: 136 PVEISRLPSLKRLLLGNNKFEGSIP 160
P + + +L L L N G IP
Sbjct: 349 PKNLGKHNNLTVLDLSTNNLTGEIP 373
|
Length = 968 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 55.1 bits (131), Expect = 5e-08
Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 24/268 (8%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-KNFVNLIGYCEDD 456
+Y V + V A + S ++ + +++ L+ +NH N V L + +D+
Sbjct: 15 EVYLARDRKLVALKVLAKKLESKSKEVER----FLREIQILASLNHPPNIVKLYDFFQDE 70
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDH-LDWNARMRIIMGTAYCLQYMHH------ELN 509
+V EY G++ + L L + + I+ L+Y+H ++
Sbjct: 71 GSL--YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIK 128
Query: 510 PPVAHSNLSSHCIYLTD---------DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA 560
P + + L D + +T ++ ++ + A
Sbjct: 129 PENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYA 188
Query: 561 DPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620
++I+S GI + E+++G P+ EK S + E + P S +
Sbjct: 189 SSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE-LPTPSLASPLSPSNPELI 247
Query: 621 LEAICEVIKECIKTDLRQRPTMNDIIVQ 648
+A +++K+ + D + R + + +
Sbjct: 248 SKAASDLLKKLLAKDPKNRLSSSSDLSH 275
|
Length = 384 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 6e-08
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKEL---GELTKLELLDLSN 128
++Q+L + G + +LGK ++L L L N+ +G IP+ L G L KL L +
Sbjct: 333 RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILF---S 389
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
N L G IP + SL+R+ L +N F G +P E ++ L+ L +
Sbjct: 390 NSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISN 437
|
Length = 968 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 4e-07
Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ + ++++ H N V L+G +++ +V EY G++ ++L + L +
Sbjct: 45 AFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
++ + ++Y+ E N V H +L++ + +++D AKV++ T + S
Sbjct: 104 LLKFSLDVCEAMEYL--EANNFV-HRDLAARNVLVSEDNVAKVSDFGLT------KEASS 154
Query: 550 DIENSVLP-----PLADPE------TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAAD 597
+ LP P A E ++++SFGIL+ EI S G++PY
Sbjct: 155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY-------------- 200
Query: 598 YLNEPRNFSCMIDPSL-KSFKQNE----LEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
PR + P + K +K + + +V+K+C D RP+ + QL +
Sbjct: 201 ----PRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 55/268 (20%)
Query: 406 SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465
SG E+ VA T ++ + + + + ++ +++++H V LIG C+ EP M+V
Sbjct: 20 SGKEVEVAVK--TLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPL--MLVM 74
Query: 466 EYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521
E AP G + ++L I D + ++ MG AY L+ H H +L++
Sbjct: 75 ELAPLGPLLKYLKKRREIPVSDLKEL--AHQVAMGMAY-LESKH------FVHRDLAARN 125
Query: 522 IYLTDDYAAKVAEICFTTIALPKSKVSDD----IENSVLPPLA--DPE----------TN 565
+ L + + AK+++ + ++ + + PL PE ++
Sbjct: 126 VLLVNRHQAKISD-----FGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSD 180
Query: 566 IYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL-EA 623
++S+G+ + E S G PY E K + M++ + + E +
Sbjct: 181 VWSYGVTLWEAFSYGAKPYGEMKGAEVIA--------------MLESGERLPRPEECPQE 226
Query: 624 ICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
I ++ C K RPT +++ R+
Sbjct: 227 IYSIMLSCWKYRPEDRPTFSELESTFRR 254
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 58/288 (20%), Positives = 109/288 (37%), Gaps = 63/288 (21%)
Query: 399 IYKGTLSSGVE------IAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452
++ G +AV T+S D K + ++ + L+ H+N V G
Sbjct: 21 VFLGECYHLEPENDKELVAVKTLKETASNDARKD----FEREAELLTNFQHENIVKFYGV 76
Query: 453 CEDDEPFNRMMVFEYAPNGTVFEHLHI------------KEMDHLDWNARMRIIMGTAYC 500
C + +P +MVFEY +G + + L M L + ++I + A
Sbjct: 77 CTEGDPP--IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASG 134
Query: 501 LQYM------HHEL---NPPVAHSNL-------SSHCIYLTDDYAAKVAEICFTTIALPK 544
+ Y+ H +L N V + + S +Y TD Y LP
Sbjct: 135 MVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVG------GHTMLPI 188
Query: 545 SKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603
+ + S++ E++++SFG+++ EI + GK P+ L+
Sbjct: 189 RWMPPE---SIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYG-------------LSNEE 232
Query: 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
C+ L + + +++ C K D +QR + DI +L++
Sbjct: 233 VIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458
+YKG L E+AV T D + + ++ + L + +H N V LIG C +P
Sbjct: 11 VYKGVLKGNTEVAVKTCRSTLPPD----LKRKFLQEAEILKQYDHPNIVKLIGVCVQKQP 66
Query: 459 FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLS 518
+V E P G++ L K+ + L +++ + A ++Y+ + H +L+
Sbjct: 67 I--YIVMELVPGGSLLTFLR-KKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLA 120
Query: 519 SHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV------LP-----PLA------D 561
+ + ++ K+++ S+ + +V +P P A
Sbjct: 121 ARNCLVGENNVLKISDFGM-------SREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYT 173
Query: 562 PETNIYSFGILMLEIIS-GKLPY 583
E++++S+GIL+ E S G PY
Sbjct: 174 SESDVWSYGILLWETFSLGDTPY 196
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 75 MLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI 134
+LD+ +L G + L +L L+L N G IPK LG L + L +N SG
Sbjct: 360 VLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGE 419
Query: 135 IPVEISRLPSLKRLLLGNNKFEGSI 159
+P E ++LP + L + NN +G I
Sbjct: 420 LPSEFTKLPLVYFLDISNNNLQGRI 444
|
Length = 968 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 48/238 (20%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVF---EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTA 498
+H N +NL+G CE NR ++ EYAP G + + L + L+ + GTA
Sbjct: 61 HHPNIINLLGACE-----NRGYLYIAIEYAPYGNLLDFLRKSRV--LETDPAFAKEHGTA 113
Query: 499 YCLQY-------------MHHELNPPVAHSNLSSHCIYLTDDYAAKVA-------EICFT 538
L M + H +L++ + + ++ A+K+A E +
Sbjct: 114 STLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYV 173
Query: 539 TIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSI-EKWAA 596
+ + V S+ + +++++SFG+L+ EI+S G PYC + EK
Sbjct: 174 KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 233
Query: 597 DY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
Y + +PRN + + E++++C + +RP I VQL +++
Sbjct: 234 GYRMEKPRNCD---------------DEVYELMRQCWRDRPYERPPFAQISVQLSRML 276
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 2e-06
Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 63/262 (24%)
Query: 428 EMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL--HIKEMDHL 485
++K+++ L + H+N V G C + ++ EY P G++ ++L H + L
Sbjct: 50 TSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQL 109
Query: 486 DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545
A+ +I G AY L H+ H +L++ + L +D K+ + A+P+
Sbjct: 110 LLFAQ-QICEGMAY-LHSQHY------IHRDLAARNVLLDNDRLVKIGDFGLAK-AVPEG 160
Query: 546 ----KVSDDIENSVLPPLADPE----------TNIYSFGILMLEIISGKLPYCEEKELSI 591
+V +D ++ V E ++++SFG+ + E+ L +C+
Sbjct: 161 HEYYRVREDGDSPVF--WYAVECLKENKFSYASDVWSFGVTLYEL----LTHCDS----- 209
Query: 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAI----------------CEV---IKECI 632
+ P+ F MI P K + + I EV +K C
Sbjct: 210 ------KQSPPKKFEEMIGP--KQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCW 261
Query: 633 KTDLRQRPTMNDIIVQLRQVIN 654
+T+ + RPT +I L+++ +
Sbjct: 262 ETEAKFRPTFRSLIPILKEMHH 283
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 4e-06
Identities = 50/239 (20%), Positives = 101/239 (42%), Gaps = 50/239 (20%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVF---EYAPNGTVFEHLH---IKEMD-----------H 484
+H N +NL+G CE +R ++ EYAP+G + + L + E D
Sbjct: 54 HHPNIINLLGACE-----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 108
Query: 485 LDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA-------EICF 537
L + A + Y+ + H +L++ I + ++Y AK+A + +
Sbjct: 109 LSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVY 165
Query: 538 TTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSI-EKWA 595
+ + V S+ + ++++S+G+L+ EI+S G PYC + EK
Sbjct: 166 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 225
Query: 596 ADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
Y L +P N + + +++++C + +RP+ I+V L +++
Sbjct: 226 QGYRLEKPLNCD---------------DEVYDLMRQCWREKPYERPSFAQILVSLNRML 269
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 6e-06
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW----------NARMR 492
HKN +NL+G C D P ++ EYA G + E+L + +++ +
Sbjct: 83 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFK 140
Query: 493 IIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT----IALPKSKV 547
++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 141 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 200
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 201 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 260
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658
+++P N + NEL + +++C QRPT ++ L +++ ++
Sbjct: 261 MDKPSNCT------------NELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILALTSN 305
Query: 659 Q 659
Q
Sbjct: 306 Q 306
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 8e-06
Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 43/269 (15%)
Query: 398 TIYKGTLSSGVEIAVAATAI-TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T+Y G + G IAV + TS+ + + +++VD L + H N V +G C DD
Sbjct: 15 TVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD 74
Query: 457 EPFNRMMVFEYAPNGTVFEHLH----IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
+ M E+ P G++ L+ + E + +I+ G AY H V
Sbjct: 75 NTISIFM--EFVPGGSISSILNRFGPLPEPVFCKYTK--QILDGVAYL-----HNNC--V 123
Query: 513 AHSNLSSHCIYLTDDYAAKVAEI-CFTTIALPKSKVS-DDIENSV--LPPLADPE----- 563
H ++ + + L + K+ + C +A + ++ S+ P PE
Sbjct: 124 VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES 183
Query: 564 -----TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL-KSFK 617
++I+S G + E+ +GK P L+ A Y+ R P L SF
Sbjct: 184 GYGRKSDIWSIGCTVFEMATGKPPLASMDRLA----AMFYIGAHRGLM----PRLPDSFS 235
Query: 618 QNELEAICEVIKECIKTDLRQRPTMNDII 646
+ + + C+ D +RP+ ++
Sbjct: 236 AAAI----DFVTSCLTRDQHERPSALQLL 260
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 42/201 (20%), Positives = 79/201 (39%), Gaps = 33/201 (16%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG-YCED 455
+YK +G E+A+ + S + K ++ L + H N V G Y +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKII-----NEIQILKKCKHPNIVKYYGSYLKK 69
Query: 456 DEPFNRMMVFEYAPNGTVFE--HLHIKEMDHLDWNARMR-IIMGTAYCLQYMHHELNPPV 512
DE +V E+ G++ + + + + ++ G L+Y+ H +
Sbjct: 70 DEL---WIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKG----LEYL-HSNG--I 119
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPE--------- 563
H ++ + I LT D K+ + + L +K + + + P PE
Sbjct: 120 IHRDIKAANILLTSDGEVKLIDFGLSAQ-LSDTKARNTMVGT--PYWMAPEVINGKPYDY 176
Query: 564 -TNIYSFGILMLEIISGKLPY 583
+I+S GI +E+ GK PY
Sbjct: 177 KADIWSLGITAIELAEGKPPY 197
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 56/273 (20%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458
+++G L VA T + + Q + + + + +H N + L G +P
Sbjct: 21 VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80
Query: 459 FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLS 518
M++ EY NG + ++L + + + + ++ G A ++Y+ ++N H +L+
Sbjct: 81 A--MIITEYMENGALDKYLRDHDGEFSSYQL-VGMLRGIAAGMKYLS-DMN--YVHRDLA 134
Query: 519 SHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP-----PL--ADPE-------- 563
+ I + + KV++ + + + DD E + P+ PE
Sbjct: 135 ARNILVNSNLECKVSDFGLSRV------LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFT 188
Query: 564 --TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620
++++SFGI+M E++S G+ PY + + K D P C PS
Sbjct: 189 SASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDC---PS-------- 237
Query: 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
A+ +++ +C + D +RP DI+ L +++
Sbjct: 238 --AVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 395 SGC--TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452
SG +++G + V +A+ I S D LK Q+ K+V L R+ HK+ ++L
Sbjct: 16 SGYFGEVWEGLWKNRVRVAIK---ILKSDDLLKQQDFQ--KEVQALKRLRHKHLISLFAV 70
Query: 453 CEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
C EP ++ E G++ L E L + + + A + Y+ +
Sbjct: 71 CSVGEPV--YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NS 125
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI---ENSVLP-PLADPE----- 563
H +L++ I + +D KVA+ + + +D+ + +P PE
Sbjct: 126 IHRDLAARNILVGEDLVCKVADFGLARL------IKEDVYLSSDKKIPYKWTAPEAASHG 179
Query: 564 -----TNIYSFGILMLEIIS-GKLPY 583
++++SFGIL+ E+ + G++PY
Sbjct: 180 TFSTKSDVWSFGILLYEMFTYGQVPY 205
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 5e-05
Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 52/267 (19%)
Query: 416 AITSSKDWL-KSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTV 473
AI K++ K + +++ L ++ H N +NL+G CE + EYAP+G +
Sbjct: 38 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL--YLAIEYAPHGNL 95
Query: 474 FEHLHIKEMDHLDWNARMRIIMGTAYCL---QYMHHELN----------PPVAHSNLSSH 520
+ L + L+ + I TA L Q +H + H +L++
Sbjct: 96 LDFLRKSRV--LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR 153
Query: 521 CIYLTDDYAAKVAEICF----------TTIALPKSKVS-DDIENSVLPPLADPETNIYSF 569
I + ++Y AK+A+ T LP ++ + + SV +D ++S+
Sbjct: 154 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSD----VWSY 209
Query: 570 GILMLEIIS-GKLPYCEEKELSI-EKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICE 626
G+L+ EI+S G PYC + EK Y L +P N + + +
Sbjct: 210 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD---------------DEVYD 254
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQVI 653
++++C + +RP+ I+V L +++
Sbjct: 255 LMRQCWREKPYERPSFAQILVSLNRML 281
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 64/280 (22%), Positives = 112/280 (40%), Gaps = 35/280 (12%)
Query: 379 ELDTACEDFSNIIDTQSGCTIYKGTLS--SGVEIAVAATAITSSKDWLKSQEMAYRKQVD 436
ELD I+ T + +G L S E+ VA + + Q + +
Sbjct: 1 ELDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEAL 58
Query: 437 TLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMG 496
TL + +H N V L G M+V EY NG + L K L M ++ G
Sbjct: 59 TLGQFDHSNIVRLEGVITRGNTM--MIVTEYMSNGALDSFLR-KHEGQLVAGQLMGMLPG 115
Query: 497 TAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA----------EICFTTIALPKSK 546
A ++Y+ E+ H L++H + + D K++ E +TT++ KS
Sbjct: 116 LASGMKYLS-EMG--YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMS-GKSP 171
Query: 547 VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605
V ++ ++++SFGI+M E++S G+ PY + + K D P
Sbjct: 172 VLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPR 231
Query: 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645
+C N L +++ +C + + +RP + I
Sbjct: 232 NC----------PNLLH---QLMLDCWQKERGERPRFSQI 258
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 7e-05
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 48/221 (21%)
Query: 399 IYKGTL-SSGVEIAVAATAITSSKDWLK-SQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+YKG L + A AI + KD + ++ + SR+ H N V L+G +
Sbjct: 21 VYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE 80
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR---------------MRIIMGTAYCL 501
+P + M+F Y + + E L ++ H D + + I+ A +
Sbjct: 81 QPLS--MIFSYCSHSDLHEFLVMRS-PHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGM 137
Query: 502 QYM--HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD----IENSV 555
+++ HH V H +L++ + + D K+++ + L + + D + NS+
Sbjct: 138 EFLSSHH-----VVHKDLATRNVLVFDKLNVKISD-----LGLFREVYAADYYKLMGNSL 187
Query: 556 LP-PLADPE----------TNIYSFGILMLEIIS-GKLPYC 584
LP PE ++I+S+G+++ E+ S G PYC
Sbjct: 188 LPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 228
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 7e-05
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 20/195 (10%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458
++KGTL +AV T +D + ++ + + L + +H N V LIG C +P
Sbjct: 11 VFKGTLKDKTPVAVK----TCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQP 66
Query: 459 FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLS 518
+V E P G L K+ D L ++ + A + Y+ + H +L+
Sbjct: 67 I--YIVMELVPGGDFLSFLR-KKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLA 120
Query: 519 SHCIYLTDDYAAKVAEI---------CFTTIALPKSKVSDDIENSVLPPLADPETNIYSF 569
+ + ++ K+++ +++ L + + ++ E++++S+
Sbjct: 121 ARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSY 180
Query: 570 GILMLEIIS-GKLPY 583
GIL+ E S G PY
Sbjct: 181 GILLWETFSLGVCPY 195
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 8e-05
Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 30/233 (12%)
Query: 402 GTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQ---------VDTLSRINHKNFVNLI-G 451
G S+G+ V + SS + ++M RKQ V + H+N V +
Sbjct: 29 GEGSTGI---VCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP 511
Y DE + M E + H + E + + L +H +
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLKALSVLHAQ---G 136
Query: 512 VAHSNLSSHCIYLTDDYAAKVAEICF---TTIALPKSKVSDDIENSVLPPLAD-----PE 563
V H ++ S I LT D K+++ F + +P+ K + P L PE
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPE 196
Query: 564 TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616
+I+S GI+++E++ G+ PY E L K D L + PSLK F
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGF 249
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 1e-04
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 427 QEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL-----HIKE 481
+++ + ++V +NH N + +G C + P+ ++V E+ P G + +L + +
Sbjct: 38 EQLLFLQEVQPYRELNHPNVLQCLGQCIESIPY--LLVLEFCPLGDLKNYLRSNRGMVAQ 95
Query: 482 MDHLDWNARM--RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA------ 533
M D RM + G + H+ + HS+L+ LT D + K+
Sbjct: 96 MAQKDVLQRMACEVASGLLWL-----HQAD--FIHSDLALRNCQLTADLSVKIGDYGLAL 148
Query: 534 ----EICFTT---IALP----KSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKL 581
E + T A+P ++ + +LP ++NI+S G+ M E+ +
Sbjct: 149 EQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQ 208
Query: 582 PY 583
PY
Sbjct: 209 PY 210
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 41/238 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWN----------ARMR 492
HKN +NL+G C D P ++ EYA G + E+L + +D++ +
Sbjct: 77 HKNIINLLGACTQDGPL--YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFK 134
Query: 493 IIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ AY + + M + + H +L++ + +T+D K+A+ I K
Sbjct: 135 DLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTT 194
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+L+ EI + G PY +EL
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR 254
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+++P N + +EL I ++EC QRPT ++ L +V+ ++
Sbjct: 255 MDKPANCT------------HELYMI---MRECWHAVPSQRPTFKQLVEDLDRVLTVT 297
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 31/151 (20%), Positives = 50/151 (33%), Gaps = 23/151 (15%)
Query: 500 CLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIALPKSKVSDDIENSVLPP 558
CL + H S I LT D + F T + + P
Sbjct: 26 CLGALR------ELHRQAKSGNILLTWDGLLKLDGSVAFKT------PEQSRPDPYFMAP 73
Query: 559 ------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+ +IYS GI + E + +LPY EE+ELS LN +
Sbjct: 74 EVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEIL--LNGMPADDPRDRSN 131
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMN 643
L+ + + + ++ C ++R N
Sbjct: 132 LEG--VSAARSFEDFMRLCASRLPQRREAAN 160
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 37/213 (17%), Positives = 84/213 (39%), Gaps = 30/213 (14%)
Query: 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT 497
L++++ + D N +M EYA NG + + L ++ L + R +
Sbjct: 53 LAKLDSSYIIRYYESFLDKGKLNIVM--EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQI 110
Query: 498 AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP 557
L ++H + + H ++ S ++L K+ ++ + + ++ I + P
Sbjct: 111 LLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGT--P 165
Query: 558 PLADPE----------TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC 607
PE +++++ G+++ E +GK P+ + ++ + P S
Sbjct: 166 YYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP--VSQ 223
Query: 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640
M + ++I +C+ D RQRP
Sbjct: 224 MYSQ-----------QLAQLIDQCLTKDYRQRP 245
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 51/210 (24%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEM---AYRKQVDTLSRINHKNFVNLIGYCED 455
++ GT + ++AV LK M A+ ++ + ++ H V L C +
Sbjct: 22 VWMGTWNGTTKVAVKT---------LKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSE 72
Query: 456 DEPFNRMMVFEYAPNGTVFEHLH------IKEMDHLDWNARMRIIMGTAYCLQYMHHELN 509
+EP +V EY G++ + L ++ +D A +I G AY L+ ++
Sbjct: 73 EEPI--YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAA--QIAEGMAY-LESRNY--- 124
Query: 510 PPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----ENSVLP-PLADPET 564
H +L++ I + ++ K+A+ + + DD E + P PE
Sbjct: 125 ---IHRDLAARNILVGENLVCKIADFGLARL------IEDDEYTAREGAKFPIKWTAPEA 175
Query: 565 NIY----------SFGILMLEIIS-GKLPY 583
Y SFGIL+ EI++ G++PY
Sbjct: 176 ANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 50/221 (22%)
Query: 399 IYKGTLS-SGVEIAVAATAITSSKDWLKSQEMA-YRKQVDTLSRINHKNFVNLIGYCEDD 456
IYKG L G++ A AI + KD Q+ ++++ ++ ++H N V L+G +
Sbjct: 21 IYKGHLYLPGMDHA-QLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE 79
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIK------------------EMDHLDWNARMRIIMGTA 498
+P M+FEY G + E L ++ +DH D+ + I + A
Sbjct: 80 QPV--CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF---LHIAIQIA 134
Query: 499 YCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----ENS 554
++Y+ H +L++ I + + K+++ + L + S D S
Sbjct: 135 AGMEYLSSHF---FVHKDLAARNILIGEQLHVKISD-----LGLSREIYSADYYRVQPKS 186
Query: 555 VL-----PPLA------DPETNIYSFGILMLEIIS-GKLPY 583
+L PP A +++I+SFG+++ EI S G PY
Sbjct: 187 LLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPY 227
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 60/271 (22%), Positives = 99/271 (36%), Gaps = 71/271 (26%)
Query: 410 IAVAATAITSSKDWLKSQEMAYRKQ---------VDTLSRINHKNFVNLIG-YCEDDEPF 459
I AT S+ + ++M RKQ V + H N V + Y DE +
Sbjct: 34 IVCIATDK-STGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELW 92
Query: 460 NRMMVFEYAPNGT---VFEHLHIKEMDHLDWNARMRIIMGTAYCLQ---YMHHELNPPVA 513
+V E+ G + H + E +I L+ ++H V
Sbjct: 93 ---VVMEFLEGGALTDIVTHTRMNEE---------QIATVCLAVLKALSFLH---AQGVI 137
Query: 514 HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIEN----------------SVLP 557
H ++ S I LT D K+++ F ++VS ++ S LP
Sbjct: 138 HRDIKSDSILLTSDGRVKLSDFGFC------AQVSKEVPRRKSLVGTPYWMAPEVISRLP 191
Query: 558 PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF--SCMIDPSLKS 615
E +I+S GI+++E++ G+ PY E L K D N P + P L+S
Sbjct: 192 --YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRD--NLPPKLKNLHKVSPRLRS 247
Query: 616 FKQNELEAICEVIKECIKTDLRQRPTMNDII 646
F + + D QR T +++
Sbjct: 248 F-----------LDRMLVRDPAQRATAAELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 4e-04
Identities = 47/212 (22%), Positives = 69/212 (32%), Gaps = 37/212 (17%)
Query: 87 LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLK 146
L L LS+L L L N S +P E+ L+ LE LDLSNN + + +S L +L
Sbjct: 178 LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLS 235
Query: 147 RLLLGNNKFEGSIPLE---------------LSRFTLLSELQFDDYLTSAEVAGIRSVNR 191
L L NNK E +S + L L L + + ++
Sbjct: 236 GLELSNNKLEDLPESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNALPL 295
Query: 192 KFGQ--------------YGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARR 237
++ +S+ N + S E + S N +
Sbjct: 296 IALLLLLLELLLNLLLTLKALELKLNSILLNNNILSNGETSSPEALSILESLNNLWT--L 353
Query: 238 KLLEQSSNLAAE----PATVGSSSDQVIALPT 265
SNL P +GS D V
Sbjct: 354 DNALDESNLNRYIVKNPNAIGSLLDLVKKHVN 385
|
Length = 394 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 52/248 (20%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 416 AITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFE 475
AI + ++ S+E + ++ + +++H V L G C + P +VFE+ +G + +
Sbjct: 32 AIKTIREGAMSEE-DFIEEAQVMMKLSHPKLVQLYGVCTERSPI--CLVFEFMEHGCLSD 88
Query: 476 HLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535
+L + + + + + Y+ V H +L++ + ++ KV++
Sbjct: 89 YLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDF 144
Query: 536 CFTTIALPKSKVSDDIENSVLP-PLADPE----------TNIYSFGILMLEIIS-GKLPY 583
T L S + P + PE ++++SFG+LM E+ S GK PY
Sbjct: 145 GMTRFVLDDQYTSS--TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPY 202
Query: 584 CEEKELS--IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT 641
E + S +E A + + P L S +++ E+++ C K RP+
Sbjct: 203 -ENRSNSEVVETINAGFR--------LYKPRLAS------QSVYELMQHCWKERPEDRPS 247
Query: 642 MNDIIVQL 649
+ ++ QL
Sbjct: 248 FSLLLHQL 255
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|205079 pfam12799, LRR_4, Leucine Rich repeats (2 copies) | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 5e-04
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFE 156
T LE LDLSNN+++ + P +S LP+L+ L L NK
Sbjct: 1 TNLETLDLSNNQITDLPP--LSNLPNLETLDLSGNKIT 36
|
Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains. Length = 43 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCED-DEPFNRMMVFEYAPNGTVFEHLHIKEMD 483
K + +A + + L ++H N +I Y E+ E M+V EYAP GT+ E++ +
Sbjct: 40 KDERLAAQNECQVLKLLSHPN---IIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNS 96
Query: 484 HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIAL 542
LD + + + L ++H +L + H +L + I L K+ + + I
Sbjct: 97 LLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153
Query: 543 PKSKVSDDI--ENSVLPPLAD-----PETNIYSFGILMLEIISGK 580
KSK + + P L + +++I++ G ++ E+ S K
Sbjct: 154 SKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLK 198
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 60/268 (22%)
Query: 397 CTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG-YCE 454
+YK T ++G E+A+ + L E+ + H N V+ Y
Sbjct: 33 GEVYKATDRATGKEVAIKKMRLRKQNKELIINEIL------IMKDCKHPNIVDYYDSYLV 86
Query: 455 DDEPFNRMMVFEYAPNGTVFEHL--HIKEM--DHLDWNARMRIIMGTAYCLQYMHHELNP 510
DE + +V EY G++ + + + M + + R ++ G L+Y+H +
Sbjct: 87 GDELW---VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCR-EVLQG----LEYLH---SQ 135
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICF-TTIALPKSKVSDDIENSVL-------PPLA-- 560
V H ++ S I L+ D + K+A+ F + KSK NSV+ P +
Sbjct: 136 NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK-----RNSVVGTPYWMAPEVIKR 190
Query: 561 ---DPETNIYSFGILMLEIISGKLPYCEEKEL----SIEKWAADYLNEPRNFSCMIDPSL 613
P+ +I+S GI+ +E+ G+ PY E L I L P +S P
Sbjct: 191 KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWS----PEF 246
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPT 641
K F + +C+ D +RP+
Sbjct: 247 KDF-----------LNKCLVKDPEKRPS 263
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 6e-04
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 405 SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464
S G I VA + S K L + K+ + ++H+N + L G MMV
Sbjct: 19 SGGKVIPVAVKCLKSDK--LSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHP---LMMV 73
Query: 465 FEYAPNGTVFEHLHIKEMDHLD----WNARMRIIMGTAY 499
E AP G++ + L + H + ++I G Y
Sbjct: 74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRY 112
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 7e-04
Identities = 45/258 (17%), Positives = 104/258 (40%), Gaps = 63/258 (24%)
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
+ ++++ L ++H+N V G CE + ++ EY P+G++ ++L + D ++ R
Sbjct: 53 FEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQ-RHRDQIN-LKR 110
Query: 491 M-----RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545
+ +I G Y L H +L++ I + + K+++ + LP+
Sbjct: 111 LLLFSSQICKGMDY-LGSQR------YIHRDLAARNILVESEDLVKISDFGLAKV-LPED 162
Query: 546 K----VSDDIENSVLPPLADPE----------TNIYSFGILMLEIISGKLPYCEEKELSI 591
K V + E+ + PE ++++SFG+ + E+ + Y +
Sbjct: 163 KDYYYVKEPGESPIF--WYAPECLRTSKFSSASDVWSFGVTLYELFT----YGDP----- 211
Query: 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNEL-----------------EAICEVIKECIKT 634
+ P F MI + L + + +++K C +
Sbjct: 212 ------SQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEA 265
Query: 635 DLRQRPTMNDIIVQLRQV 652
+ + RP+ D+I+ + ++
Sbjct: 266 EPQDRPSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 7e-04
Identities = 50/241 (20%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 443 HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWN---ARMR------- 492
HKN +NL+G C D P ++ EYA G + E+L + ++++ AR+
Sbjct: 80 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFK 137
Query: 493 -IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT----TIALPKSKV 547
++ T + M + + H +L++ + +T++ K+A+ I K
Sbjct: 138 DLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTT 197
Query: 548 SDDIENSVLPPLA------DPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ + + P A +++++SFG+LM EI + G PY +EL
Sbjct: 198 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 257
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658
+++P N + NEL + +++C RPT ++ L +++ ++
Sbjct: 258 MDKPANCT------------NELYMM---MRDCWHAIPSHRPTFKQLVEDLDRILTLTTN 302
Query: 659 Q 659
+
Sbjct: 303 E 303
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|205079 pfam12799, LRR_4, Leucine Rich repeats (2 copies) | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 8e-04
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 97 LRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE 138
L L L N + + L L LE LDLS NK++ + P+
Sbjct: 3 LETLDLSNNQITDL--PPLSNLPNLETLDLSGNKITDLSPLS 42
|
Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains. Length = 43 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 9e-04
Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYR-------------KQVDTLSRINHKN 445
I L+ E+ + W ++A + ++ + +++H N
Sbjct: 1 IDPSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN 60
Query: 446 FVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH 505
V L G C P +V EY NG + +L +E + M + C +
Sbjct: 61 LVQLYGVCTKQRPI--FIVTEYMANGCLLNYL--RERKGK-LGTEWLLDMCSDVCEAMEY 115
Query: 506 HELNPPVAHSNLSS-HCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP-PLADPE 563
E N H +L++ +C+ + +D KV++ L S + + P A PE
Sbjct: 116 LESNG-FIHRDLAARNCL-VGEDNVVKVSDFGLARYVLDDQYTSS--QGTKFPVKWAPPE 171
Query: 564 ----------TNIYSFGILMLEIIS-GKLPY 583
++++SFG+LM E+ S GK+PY
Sbjct: 172 VFDYSRFSSKSDVWSFGVLMWEVFSEGKMPY 202
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 0.001
Identities = 20/57 (35%), Positives = 24/57 (42%)
Query: 120 KLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
L+ LDLSNN+L+ I LP+LK L L N P S L L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSG 57
|
Length = 60 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 22/175 (12%)
Query: 424 LKSQEMA---YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK 480
LK M + K+ + I H N V L+G C + PF ++ E+ G + ++L +
Sbjct: 39 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYL--R 94
Query: 481 EMDHLDWNARMRIIMGT--AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI--- 535
E + + NA + + M T + ++Y+ + H +L++ + +++ KVA+
Sbjct: 95 ECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 151
Query: 536 ------CFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY 583
+T A K + S+ ++++++FG+L+ EI + G PY
Sbjct: 152 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 206
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.002
Identities = 57/290 (19%), Positives = 112/290 (38%), Gaps = 66/290 (22%)
Query: 399 IYKGTLSS--GVEIAVA-----ATAITSS--KDWLKSQEMAYRKQVDTLSRINHKNFVNL 449
+ +G LS G ++ VA T S +++L E A K D H N + L
Sbjct: 15 VMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLS--EAACMKDFD------HPNVMKL 66
Query: 450 IGYCEDDEPFNR----MMVFEYAPNGTVFEHLHIKEMD----HLDWNARMRIIMGTAYCL 501
IG C + + M++ + +G + L + L ++ ++ A +
Sbjct: 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126
Query: 502 QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD----------- 550
+Y+ N H +L++ L +D +C L K S D
Sbjct: 127 EYLS---NRNFIHRDLAARNCMLREDMT-----VCVADFGLSKKIYSGDYYRQGRIAKMP 178
Query: 551 IENSVLPPLAD----PETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADYLNEPR 603
++ + LAD ++++++FG+ M EI + G+ PY E E+ + L +P
Sbjct: 179 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPE 238
Query: 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
+ C+ + + +++ C + D + RPT + L ++
Sbjct: 239 D--CL-------------DELYDLMYSCWRADPKDRPTFTKLREVLENIL 273
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 38/173 (21%)
Query: 430 AYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNA 489
A+ ++ +++++HKN V L+G + + +V E G + L
Sbjct: 45 AFLEETAVMTKLHHKNLVRLLGVILHNGLY---IVMELMSKGNLVNFLR----------T 91
Query: 490 RMRIIMGTAYCLQY-------MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542
R R ++ LQ+ M + + + H +L++ I +++D AKV++ +
Sbjct: 92 RGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVG- 150
Query: 543 PKSKVSDDIENSVLP-----PLA------DPETNIYSFGILMLEIIS-GKLPY 583
S ++NS LP P A +++++S+G+L+ E+ S G+ PY
Sbjct: 151 -----SMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY 198
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 111 IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
+P L L L+ LDLS N LS +P +S L +L L L NK +P E+ + L
Sbjct: 155 LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALE 212
Query: 171 EL 172
EL
Sbjct: 213 EL 214
|
Length = 394 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 51/241 (21%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 429 MAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWN 488
+A+ + +S+++HK+ V L G C DE +MV EY G + LH +E +++ +
Sbjct: 46 LAFFETASLMSQLSHKHLVKLYGVCVRDE---NIMVEEYVKFGPLDVFLH-REKNNVSLH 101
Query: 489 ARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA-------AKVAEICFTTIA 541
++ + A L Y+ + + H N+ I + K+++
Sbjct: 102 WKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158
Query: 542 LPKSKVSDDIENSVLPP--LADPETNI------YSFGILMLEIIS-GKLPY----CEEKE 588
L + + + I + P + + + ++ +SFG +LEI S G+ P EKE
Sbjct: 159 LSREERVERI--PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE 216
Query: 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648
+ L P EL +I +C D +RP+ I+
Sbjct: 217 RFYQ--DQHRLPMP--------------DCAEL---ANLINQCWTYDPTKRPSFRAILRD 257
Query: 649 L 649
L
Sbjct: 258 L 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 50/261 (19%), Positives = 108/261 (41%), Gaps = 51/261 (19%)
Query: 426 SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHI------ 479
S+ + + L ++NH + + L G C D P +++ EYA G++ L
Sbjct: 45 SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRSFLRESRKVGP 102
Query: 480 -----------KEMDHLDWNA-RMRIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTD 526
+D+ D A M ++ A+ + + M + + H +L++ + + +
Sbjct: 103 SYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAE 162
Query: 527 DYAAKVAEICFT------TIALPKSKVSDDIENSVLPPLAD----PETNIYSFGILMLEI 576
K+++ + + +SK ++ + L D +++++SFG+L+ EI
Sbjct: 163 GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 222
Query: 577 IS-GKLPY---CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECI 632
++ G PY E+ ++ K + P N S E + ++ C
Sbjct: 223 VTLGGNPYPGIAPERLFNLLK-TGYRMERPENCS---------------EEMYNLMLTCW 266
Query: 633 KTDLRQRPTMNDIIVQLRQVI 653
K + +RPT DI +L +++
Sbjct: 267 KQEPDKRPTFADISKELEKMM 287
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 39.7 bits (92), Expect = 0.004
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 412 VAATAITSSKDWLKSQEMA-YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPN 470
V A I + + LK E A +R++ D L +++ L +D+ N +V +Y
Sbjct: 28 VFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN--NLYLVMDYYVG 85
Query: 471 GTV------FEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSH---- 520
G + FE ++M + A M I + + + L Y+H ++ P +++ H
Sbjct: 86 GDLLTLLSKFEDRLPEDMARF-YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLA 144
Query: 521 ----CIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLAD------PETNIYSFG 570
C+ L +D + + + P D I +L + D PE + +S G
Sbjct: 145 DFGSCLKLMEDGTVQSS----VAVGTP-----DYISPEILQAMEDGKGKYGPECDWWSLG 195
Query: 571 ILMLEIISGKLPYCEE 586
+ M E++ G+ P+ E
Sbjct: 196 VCMYEMLYGETPFYAE 211
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 680 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.98 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.98 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.98 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.98 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.98 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.98 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.98 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.98 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.98 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.98 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.98 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.98 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.98 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.98 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.98 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.98 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.98 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.98 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.98 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.98 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.98 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.97 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.97 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.97 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.97 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.97 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.97 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.97 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.97 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.97 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.97 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.97 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.97 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.97 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.97 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.96 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.96 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.96 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.96 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.96 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.96 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.96 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.95 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.95 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.95 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.95 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.95 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.95 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.95 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.94 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.94 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.94 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.94 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.94 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.94 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.93 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.93 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.92 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.91 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.91 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.91 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.9 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.9 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.89 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.88 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.88 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.87 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.87 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.87 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.87 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.86 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.86 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.85 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.84 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.84 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.82 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.82 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.81 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.78 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.76 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.75 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.75 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.73 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.73 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.72 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.72 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.7 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.7 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.7 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.69 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.69 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.69 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.67 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.65 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.59 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.58 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.56 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.56 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.54 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.54 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.49 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.33 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.28 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.28 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.26 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.25 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.21 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.21 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.2 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.13 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.13 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.11 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.08 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.05 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.04 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.04 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.03 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 98.95 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.95 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 98.92 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.91 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.85 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.82 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.81 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 98.81 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 98.78 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.77 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.76 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 98.76 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.7 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.66 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.65 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.63 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.61 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.58 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.57 | |
| PF08263 | 43 | LRRNT_2: Leucine rich repeat N-terminal domain; In | 98.57 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.56 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.54 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.54 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.54 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 98.52 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 98.51 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.5 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.48 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.47 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.45 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 98.41 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 98.35 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 98.32 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.28 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.27 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 98.26 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.09 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.08 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.06 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 98.0 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.92 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 97.9 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.89 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 97.88 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 97.84 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 97.79 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 97.77 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.76 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 97.75 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 97.75 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-57 Score=547.57 Aligned_cols=549 Identities=24% Similarity=0.350 Sum_probs=369.1
Q ss_pred eCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcE
Q 005734 68 CLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKR 147 (680)
Q Consensus 68 c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 147 (680)
|..++++.|++++|.+.+.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|..+..+++|+.
T Consensus 377 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 456 (968)
T PLN00113 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQM 456 (968)
T ss_pred hCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcE
Confidence 44567888999999999889988899999999999999999888988999999999999999999888888888888888
Q ss_pred EEccCCcccccCChhhcCCCCCCeeeccCcccccccCCcccccc-----------ccCCcccccCCCCCCcccCCCCCCC
Q 005734 148 LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNR-----------KFGQYGFKIGEDSLHTNGDHSCANL 216 (680)
Q Consensus 148 L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~s~n~l 216 (680)
|+|++|.+.|.+|..+ ..++|+.|++++|.+++.+|....... ..+..+..+..+..++.+++++|++
T Consensus 457 L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 535 (968)
T PLN00113 457 LSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535 (968)
T ss_pred EECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcc
Confidence 8888888888887755 347788888888888877775321111 1112234566777788888899999
Q ss_pred CCCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCCC-C-CCCccccccCCCCCCCCCCCCCCC------ccCCCCCCCC
Q 005734 217 PGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPATV-G-SSSDQVIALPTSRSSGTFPAIPTA------TKKHFPGPAA 288 (680)
Q Consensus 217 ~~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~-~-~~~~~~~~~~~~~~~g~~p~~~~~------~~~~~~~~~~ 288 (680)
+|.+|..+. .+.++. .+.+++|++.+..+.. . ...++..+++.|..+|.+|..... ...+|+..
T Consensus 536 ~~~~p~~~~----~l~~L~--~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l-- 607 (968)
T PLN00113 536 SGQIPASFS----EMPVLS--QLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDL-- 607 (968)
T ss_pred cccCChhHh----CcccCC--EEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccc--
Confidence 888887765 222222 3455677776544321 1 123566778888888888753211 11111100
Q ss_pred CCCccccccCcccccCCCCCCCCCCCCCCCCcce-EEEeehhHHHHHHHHHHHHHHHhhhccccccCCCCCCCchhhhhh
Q 005734 289 SPPIVSAVQGSISKFNKSSKPTSPAPSDSSESIW-KYFLIIPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKA 367 (680)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (680)
|..... ...+++ ....+...+ .++++++++++++++++++++++++++....+...... +..+..
T Consensus 608 ---c~~~~~-------~~~~~c---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 673 (968)
T PLN00113 608 ---CGGDTT-------SGLPPC---KRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENED-GTWELQ 673 (968)
T ss_pred ---cCCccc-------cCCCCC---ccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccccccccc-cccccc
Confidence 000000 000011 011111122 22222222222222222223333333221111111000 000000
Q ss_pred -hh-cCCCCCCHHHHHHHhhhhccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC
Q 005734 368 -FV-TGVPKLNRLELDTACEDFSNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444 (680)
Q Consensus 368 -~~-~~~~~~~~~~l~~~~~~~~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ 444 (680)
+. .....++..++... ....++||+|+||.||+|+. .+|..||||++..... ....|++.+++++||
T Consensus 674 ~~~~~~~~~~~~~~~~~~-~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~l~~l~Hp 743 (968)
T PLN00113 674 FFDSKVSKSITINDILSS-LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---------IPSSEIADMGKLQHP 743 (968)
T ss_pred ccccccchhhhHHHHHhh-CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---------ccHHHHHHHhhCCCC
Confidence 00 00112333333332 12237999999999999997 5789999998753221 123468899999999
Q ss_pred cccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005734 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524 (680)
Q Consensus 445 niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 524 (680)
|||+++|+|.+++ ..++|||||++|+|.++++ .++|.++.+|+.|+|+||+|||+.+.++|+||||||+||++
T Consensus 744 nIv~~~~~~~~~~--~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~ 816 (968)
T PLN00113 744 NIVKLIGLCRSEK--GAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII 816 (968)
T ss_pred CcceEEEEEEcCC--CCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE
Confidence 9999999999877 5799999999999999995 38999999999999999999998888899999999999999
Q ss_pred cCCCCeEEcccccccccCCCCC----cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcc--ccccHHHHHHHH
Q 005734 525 TDDYAAKVAEICFTTIALPKSK----VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEE--KELSIEKWAADY 598 (680)
Q Consensus 525 d~~~~~ki~DFGla~~~~~~~~----~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~--~~~~~~~~~~~~ 598 (680)
|+++.+++. ||.+........ .....||+.....+++++|||||||++|||+||+.||+.. ....+.+|.+..
T Consensus 817 ~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~ 895 (968)
T PLN00113 817 DGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYC 895 (968)
T ss_pred CCCCceEEE-eccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHh
Confidence 999988875 665544322211 2233456655667899999999999999999999998643 224567777655
Q ss_pred hcCCCCcccccCcccC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 599 LNEPRNFSCMIDPSLK---SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~---~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
... ......+|+.+. ....++..++.+++.+||+.+|++||+|+||+++|+++....++
T Consensus 896 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~ 957 (968)
T PLN00113 896 YSD-CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSS 957 (968)
T ss_pred cCc-cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccc
Confidence 433 334455666553 23456777899999999999999999999999999999775544
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-56 Score=474.66 Aligned_cols=277 Identities=32% Similarity=0.630 Sum_probs=239.5
Q ss_pred CCCCCHHHHHHHhhhhc--cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccce
Q 005734 372 VPKLNRLELDTACEDFS--NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNL 449 (680)
Q Consensus 372 ~~~~~~~~l~~~~~~~~--~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l 449 (680)
...|++.|+..||++|+ ++||+|+||.||||.+++|..||||++.....+ . .++|..|++++.+++|||+|+|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~----~-~~eF~~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ----G-EREFLNEVEILSRLRHPNLVKL 136 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc----c-hhHHHHHHHHHhcCCCcCcccE
Confidence 45689999999999998 899999999999999999999999977654421 1 4569999999999999999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 005734 450 IGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA 529 (680)
Q Consensus 450 ~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 529 (680)
+|||.+.+. +.+||||||+||+|+++|+......++|.+|++||.++|+||+|||+.+.|+|+||||||+|||||++++
T Consensus 137 lGyC~e~~~-~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~ 215 (361)
T KOG1187|consen 137 LGYCLEGGE-HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN 215 (361)
T ss_pred EEEEecCCc-eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence 999998873 3799999999999999998765438999999999999999999999999999999999999999999999
Q ss_pred eEEcccccccccCC-CCCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcc---ccccHHHHHHH
Q 005734 530 AKVAEICFTTIALP-KSKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEE---KELSIEKWAAD 597 (680)
Q Consensus 530 ~ki~DFGla~~~~~-~~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~---~~~~~~~~~~~ 597 (680)
+||+|||+|+.... .... ....|+|...+.+++|+|||||||+|+||+||+.+.+.. .+..+.+|+..
T Consensus 216 aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 216 AKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred EEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 99999999977654 2221 123356666677899999999999999999999998743 33568999988
Q ss_pred HhcCCCCcccccCcccC--CCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 598 YLNEPRNFSCMIDPSLK--SFKQ-NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 598 ~~~~~~~~~~~~d~~l~--~~~~-~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+.+. .+.+++|+.+. .+.. +++.++.+++.+|++.+|++||+|.||+++|+.+...
T Consensus 296 ~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 296 LLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 87774 78999999985 4443 6888999999999999999999999999999776554
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-46 Score=387.75 Aligned_cols=255 Identities=17% Similarity=0.321 Sum_probs=217.1
Q ss_pred HHHHHHHhhhhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC
Q 005734 377 RLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456 (680)
Q Consensus 377 ~~~l~~~~~~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 456 (680)
.+++......+.+.||+|-||.||.|.++....||||.++.... ...+|.+|+++|++++|+|||+++|+|..+
T Consensus 200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m------~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 200 PWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM------SPEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred CeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc------ChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 34555555566789999999999999998888999999976532 245799999999999999999999999987
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
+ -.+||||||++|+|.++|+...+..+.-.+.+.+|.|||+||+||+++ ++|||||.++||||+++..+||+|||
T Consensus 274 ~--piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFG 348 (468)
T KOG0197|consen 274 E--PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFG 348 (468)
T ss_pred C--ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccc
Confidence 7 469999999999999999876777899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCc---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 537 FTTIALPKSKV---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 537 la~~~~~~~~~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
|||...++... ..+.||......++.|||||||||+||||+| |+.||.+....++.+.+.+..+.+
T Consensus 349 LAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp---- 424 (468)
T KOG0197|consen 349 LARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLP---- 424 (468)
T ss_pred cccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCC----
Confidence 99965443322 2234666667789999999999999999999 999998877666666665544432
Q ss_pred cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 607 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.++.|+.++.++|..||+.+|++|||++.+...|+++...
T Consensus 425 ---------~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 425 ---------RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ---------CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 2456778999999999999999999999999999887653
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=383.66 Aligned_cols=248 Identities=22% Similarity=0.385 Sum_probs=199.8
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||+||+|.+.....||||++....... ...++|.+|+.+|.+++|||||+++|+|.++.. ..+|||||
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~---~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iVtEy 121 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDD---ESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIVTEY 121 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcCh---HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEEEEe
Confidence 35699999999999999755559999987654322 227789999999999999999999999998652 36899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eeecCCCCCCeeecCCC-CeEEcccccccccCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP-VAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPK- 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~-ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~- 544 (680)
|++|+|.++++......++|..+++||.|||+||.|||+. . ||||||||+|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 9999999999875556899999999999999999999998 5 99999999999999998 9999999999887632
Q ss_pred CC-------cccccccCCC--CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 545 SK-------VSDDIENSVL--PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 545 ~~-------~~~~~~~~~~--~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.. .....||... ...++.|+|||||||++|||+||+.||.+.....+...+...... + .
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~R---------p---~ 266 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLR---------P---P 266 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC---------C---C
Confidence 11 1122344444 346899999999999999999999999876543333222211111 1 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..+...+..++.+||+.||+.||++.+++..|+.+..
T Consensus 267 ~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 267 IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 122355789999999999999999999999999998865
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=389.57 Aligned_cols=260 Identities=21% Similarity=0.355 Sum_probs=217.5
Q ss_pred HHHHHHhhhhccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceee
Q 005734 378 LELDTACEDFSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG 451 (680)
Q Consensus 378 ~~l~~~~~~~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g 451 (680)
.++......|-+.||+|+||.||+|... +...||||.++.+.. ...+.+|++|+++++.++|||||+|+|
T Consensus 481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~----~~~~~dF~REaeLla~l~H~nIVrLlG 556 (774)
T KOG1026|consen 481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE----NQARQDFRREAELLAELQHPNIVRLLG 556 (774)
T ss_pred eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc----HHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 4455555556689999999999999853 346789998865442 346789999999999999999999999
Q ss_pred EEecCCCCceEEEEEecCCCChhhhhccC--------CCC----CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIK--------EMD----HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 452 ~~~~~~~~~~~lV~ey~~~GsL~~~l~~~--------~~~----~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
.|.+++|. ++|+|||..|+|.++|+.. .+. +|+-.+.+.||.|||.||.||-+. .+|||||..
T Consensus 557 VC~~~~P~--~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLAT 631 (774)
T KOG1026|consen 557 VCREGDPL--CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLAT 631 (774)
T ss_pred EEccCCee--EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhh
Confidence 99999965 9999999999999999743 122 389999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~ 588 (680)
+|+|+.++..+||+||||+|-.....++. ...+|....+++|++||||||||||||++| |+.||.+...
T Consensus 632 RNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn 711 (774)
T KOG1026|consen 632 RNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN 711 (774)
T ss_pred hhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch
Confidence 99999999999999999998765433322 233667777899999999999999999999 9999998776
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
+++.+.++.. ++-+.+++++.++..||..||+..|++||+++||...|+.....++..
T Consensus 712 ~EVIe~i~~g-------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~ 769 (774)
T KOG1026|consen 712 QEVIECIRAG-------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY 769 (774)
T ss_pred HHHHHHHHcC-------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence 6666655431 122457788899999999999999999999999999999987766554
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=376.79 Aligned_cols=253 Identities=18% Similarity=0.368 Sum_probs=215.7
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEe
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCE 454 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 454 (680)
||+.+.....++||.|.||.||+|+++ .-..||||.++... +.++.++|+.|..+|++++||||++|.|+..
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy----tekqrrdFL~EAsIMGQFdHPNIIrLEGVVT 700 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY----TEKQRRDFLSEASIMGQFDHPNIIRLEGVVT 700 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc----cHHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence 344444444589999999999999985 23568999887654 4567899999999999999999999999999
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcc
Q 005734 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534 (680)
Q Consensus 455 ~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~D 534 (680)
...+ .+||+|||+||+|+.+|+.+.+ .++|.+...+..|||.||.||-.. ++|||||.++|||++.+..+||+|
T Consensus 701 ks~P--vMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsD 774 (996)
T KOG0196|consen 701 KSKP--VMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSD 774 (996)
T ss_pred cCce--eEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEecc
Confidence 8885 4999999999999999987765 599999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCC-----------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 535 ICFTTIALPKSK-----------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 535 FGla~~~~~~~~-----------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
||++|.+.++.. ...+.|+..+...++..||||||||||||+++ |.+||.+...+++.+-++..++-+
T Consensus 775 FGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLP 854 (996)
T KOG0196|consen 775 FGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLP 854 (996)
T ss_pred ccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCC
Confidence 999998753321 11233566677789999999999999999998 999999888788877777665543
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
. +.+|+..+.+||+.||++|-.+||++.+|+..|++++.
T Consensus 855 p-------------PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 855 P-------------PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred C-------------CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 2 34567899999999999999999999999999999864
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=337.37 Aligned_cols=241 Identities=16% Similarity=0.280 Sum_probs=197.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|..|+|||+.++ +++.+|.|++.... +....++..+|++++++++||+||+++|.|...+. +..|+|||
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~----~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI~mEY 159 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNI----DPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISICMEY 159 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccC----CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEeehhh
Confidence 68999999999999985 78889999985433 24567789999999999999999999999998773 48999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
|.+|||++++... +.++....-+||.+|.+||.|||+. .+||||||||+|||++..|++||+|||.++.+....
T Consensus 160 MDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~ 235 (364)
T KOG0581|consen 160 MDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIAN 235 (364)
T ss_pred cCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcc
Confidence 9999999998643 4689999999999999999999963 299999999999999999999999999999876432
Q ss_pred ----CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcc--ccccHHHHHHHHhcCCCCcccccCcccCCCCH-
Q 005734 546 ----KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEE--KELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ- 618 (680)
Q Consensus 546 ----~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~- 618 (680)
+.....||......++.++||||||++++|+.+|+.||... ...++.+.+...+.++. | ..+.
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp-------P---~lP~~ 305 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP-------P---RLPEG 305 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC-------C---CCCcc
Confidence 12233455556667899999999999999999999999753 22455555555544321 1 1222
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+..++..++..|+++||.+||+++|++++
T Consensus 306 ~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 306 EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 355789999999999999999999999875
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=351.82 Aligned_cols=275 Identities=20% Similarity=0.375 Sum_probs=210.0
Q ss_pred CHHHHHHHhhhhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 376 NRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 376 ~~~~l~~~~~~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
..+||........+.||+|+||+||||.+.. .||||+++..... .++.+.|+.||.++++-||.||+-+.|||..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt---~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPT---PEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCC---HHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 3445544444456899999999999999963 4999999887644 4577899999999999999999999999998
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
+. . .||+.+|++-+|+.+||... ..++..+.+.||.|||+|+.|||.+ +|||||||+.||+|++++.+||+||
T Consensus 460 p~--~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 460 PP--L-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred Cc--e-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecc
Confidence 76 3 89999999999999999654 5688999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCC---C-------CcccccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC
Q 005734 536 CFTTIALPK---S-------KVSDDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 536 Gla~~~~~~---~-------~~~~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
||+.....- . ......||.. ..-.+++.+||||||+|+|||+||..||.......+. .. +..
T Consensus 533 GLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi---fm-VGr- 607 (678)
T KOG0193|consen 533 GLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII---FM-VGR- 607 (678)
T ss_pred cceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE---EE-ecc-
Confidence 999764311 0 0111122221 1336789999999999999999999999843211111 11 111
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC-CCCCCCCCChhHHHH
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS-PEQAVPRLSPLWWAE 671 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~-~~~~~~~~~~~~~~~ 671 (680)
+ .+.+++......+..++.+|+..||..++++||.+.+|+..|+++.... .-.+.+..|-..+..
T Consensus 608 G----~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS~S~P~~~~~~ 673 (678)
T KOG0193|consen 608 G----YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRSASEPVLLRSS 673 (678)
T ss_pred c----ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccCcCccchhhhh
Confidence 0 0112233334567789999999999999999999999999999987732 223344445444433
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=353.00 Aligned_cols=260 Identities=22% Similarity=0.352 Sum_probs=211.6
Q ss_pred HHHHHHhhhhccccCCCCCCeEEEEEeCC--C--CE-EEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeE
Q 005734 378 LELDTACEDFSNIIDTQSGCTIYKGTLSS--G--VE-IAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452 (680)
Q Consensus 378 ~~l~~~~~~~~~~iG~G~~g~Vyk~~~~~--g--~~-vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~ 452 (680)
+++....-.+.+.||+|+||.||+|++.. + .. ||||..+... ...+.+..+|.+|.++|++++|||||+++|+
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~--~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS--ELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc--cccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 45555555566899999999999999853 3 23 7888776421 2335678899999999999999999999999
Q ss_pred EecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEE
Q 005734 453 CEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532 (680)
Q Consensus 453 ~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki 532 (680)
+....|. +||||+|.||+|.++|.... ..++..++++++.++|.||+|||+. .++||||-++|+|++.++.+||
T Consensus 230 a~~~~Pl--~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 230 AVLEEPL--MLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred EcCCCcc--EEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEe
Confidence 9998865 99999999999999997544 3699999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCCCC--------CcccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHH-HHHhcCC
Q 005734 533 AEICFTTIALPKS--------KVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWA-ADYLNEP 602 (680)
Q Consensus 533 ~DFGla~~~~~~~--------~~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~-~~~~~~~ 602 (680)
+|||+++...... ......|++...+.+++++|||||||++||+++ |..||.+....++..++ ....+.+
T Consensus 304 SDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 304 SDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMP 383 (474)
T ss_pred CccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCC
Confidence 9999988764111 122344777777789999999999999999999 89999987766666655 2222221
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
.+...+.++..++.+||..+|++||+|.+|.+.++.+......
T Consensus 384 -------------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 384 -------------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred -------------CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 1223457788899999999999999999999999999766543
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=345.79 Aligned_cols=256 Identities=15% Similarity=0.283 Sum_probs=216.2
Q ss_pred CCCHHHHHHHhhhhccccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeE
Q 005734 374 KLNRLELDTACEDFSNIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452 (680)
Q Consensus 374 ~~~~~~l~~~~~~~~~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~ 452 (680)
..+.+|+++......+.||.|-||.||.|.|+. .-.||||.++-. .....+|.+|..+|+.++|||+|+|+|+
T Consensus 258 n~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED------tMeveEFLkEAAvMKeikHpNLVqLLGV 331 (1157)
T KOG4278|consen 258 NADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------TMEVEEFLKEAAVMKEIKHPNLVQLLGV 331 (1157)
T ss_pred CcchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc------chhHHHHHHHHHHHHhhcCccHHHHhhh
Confidence 446677777655566999999999999999963 556899887543 2346789999999999999999999999
Q ss_pred EecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEE
Q 005734 453 CEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532 (680)
Q Consensus 453 ~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki 532 (680)
|....++ |||+|||.+|+|.++|++.++..++--..+.+|.||+.||.||... .+|||||..+|+|+.++..+||
T Consensus 332 CT~EpPF--YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 332 CTHEPPF--YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred hccCCCe--EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEe
Confidence 9988765 9999999999999999988888888888999999999999999998 9999999999999999999999
Q ss_pred cccccccccCCCCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 533 AEICFTTIALPKSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 533 ~DFGla~~~~~~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
+||||++++..+.+.. .+.++..+.-.++.|+|||+|||+|||+.| |..||.+.+-..+...+++.++.
T Consensus 407 ADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM- 485 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM- 485 (1157)
T ss_pred eccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc-
Confidence 9999999998665433 233566666678999999999999999999 99999875533344444333322
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
+.++.|+..+.+||++||+++|.+||++.|+.+.++.+.
T Consensus 486 ------------~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 486 ------------DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred ------------cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 235678899999999999999999999999999999874
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-40 Score=370.12 Aligned_cols=254 Identities=20% Similarity=0.339 Sum_probs=205.6
Q ss_pred HHhhhhccccCCCCCCeEEEEEeC--CCC----EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 382 TACEDFSNIIDTQSGCTIYKGTLS--SGV----EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 382 ~~~~~~~~~iG~G~~g~Vyk~~~~--~g~----~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
...-.+.+.||+|.||.||+|... +|. .||||.++... +.....+|.+|..+|++++|||||+++|.|.+
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~----~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS----SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC----CHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 334455689999999999999974 343 36777665432 24567889999999999999999999999999
Q ss_pred CCCCceEEEEEecCCCChhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCe
Q 005734 456 DEPFNRMMVFEYAPNGTVFEHLHIK-----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAA 530 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~l~~~-----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 530 (680)
.. ..+|++|||++|+|..+|++. ....++-.+.+.+|.|||+|+.||++. ++|||||.++|+||+....+
T Consensus 767 ~~--~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 767 SG--PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred CC--CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcE
Confidence 77 469999999999999999854 135689999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCCCCC----------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHh
Q 005734 531 KVAEICFTTIALPKSK----------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYL 599 (680)
Q Consensus 531 ki~DFGla~~~~~~~~----------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~ 599 (680)
||+|||+|+-.....+ .....||+...+.++.|+|||||||++||++| |..||.+....++...+..
T Consensus 842 KIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~-- 919 (1025)
T KOG1095|consen 842 KIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE-- 919 (1025)
T ss_pred EEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh--
Confidence 9999999994332221 12234566666889999999999999999999 9999987665555443222
Q ss_pred cCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 600 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
. +.+ +.+..|++.+.++|.+||+.+|++||++..++++++.+.....
T Consensus 920 -g-gRL---------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 920 -G-GRL---------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred -C-Ccc---------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 2 111 1345677899999999999999999999999999999875443
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=339.40 Aligned_cols=238 Identities=16% Similarity=0.289 Sum_probs=196.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.++||+|||+.||+++. ..|..||+|++..+..+. ..+.....+||++.+.++|||||++++|+++.+ +.|||.|
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k--~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~--nVYivLE 98 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKK--PKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN--NVYIVLE 98 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcC--cchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC--ceEEEEE
Confidence 48999999999999997 899999999998755332 345667889999999999999999999999988 8899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
+|++|+|..++. .++.++..+...+..||+.||.|||+. +|+|||||-.|++|++++++||+|||||..+..+.
T Consensus 99 LC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 99 LCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred ecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 999999999986 446899999999999999999999999 99999999999999999999999999999887432
Q ss_pred --CcccccccCCCCCCC-----CCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 --KVSDDIENSVLPPLA-----DPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 --~~~~~~~~~~~~~~~-----s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.+-...|.|.+|+.. +.++||||+|||||-|++|++||.... +.+...+.......+ +.
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~---vkety~~Ik~~~Y~~-----------P~ 239 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT---VKETYNKIKLNEYSM-----------PS 239 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch---HHHHHHHHHhcCccc-----------cc
Confidence 222334666666544 567999999999999999999997543 333333332221111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+..+|+.+.++.+|.+|||+++|+..
T Consensus 240 ~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 240 HLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 223678899999999999999999999864
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=331.06 Aligned_cols=259 Identities=18% Similarity=0.320 Sum_probs=210.9
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 458 (680)
|+.+..--|.+.||+|-||.|..+....+..||||.++.... +...++|.+|+++|.+++|||||+|+|.|..+++
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~----~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP 609 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT----KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP 609 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccc----hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc
Confidence 333333345589999999999999998889999999876543 4457899999999999999999999999999985
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
. ++|+|||++|+|.+++.......+.-..-++||.|||.||+||.+- ++||||+.++|+|+|.++++||+|||++
T Consensus 610 i--cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 610 L--CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred h--HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccc
Confidence 4 9999999999999999766544456667788999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCccc----------ccccCCCCCCCCCCCCeeehhHHHHHHHh--CCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 539 TIALPKSKVSD----------DIENSVLPPLADPETNIYSFGILMLEIIS--GKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 539 ~~~~~~~~~~~----------~~~~~~~~~~~s~~sDVySfGvvllEllt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
+.+.....+.. ...+...-+.+++++|||+|||++||+++ ..+||.+..+..+++.....++....-.
T Consensus 685 R~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~ 764 (807)
T KOG1094|consen 685 RNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQV 764 (807)
T ss_pred cccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcce
Confidence 97653332221 12344556789999999999999999877 8899987766667766666665533211
Q ss_pred cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 607 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
- ...+.-++.++.+++.+||..|-++||+++++...|++.
T Consensus 765 ~------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 765 V------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred e------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1 122345668899999999999999999999999998864
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=318.41 Aligned_cols=195 Identities=23% Similarity=0.359 Sum_probs=165.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||.|+|++||+|+++ ++.+||||.+..+.. .++..+....|+.+|+.++|||||+|+.++..++ ..+|||||
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l---~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~--~i~lVMEy 90 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL---NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD--FIYLVMEY 90 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhcc---CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC--eEEEEEEe
Confidence 56999999999999985 689999999976542 2455677899999999999999999999999988 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC------CCeEEccccccccc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD------YAAKVAEICFTTIA 541 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~------~~~ki~DFGla~~~ 541 (680)
|.+|+|.++++.+. .++......++.|+|.||++||+. +||||||||.||||+.. -.+||+|||+|+.+
T Consensus 91 C~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 91 CNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999997554 689999999999999999999999 99999999999999764 45899999999998
Q ss_pred CCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHH
Q 005734 542 LPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~ 593 (680)
.+..... .+.||......|+.|+|+||.|+|+||++||+.||+.....++..
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~ 224 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL 224 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH
Confidence 7543221 223444445688999999999999999999999998655444444
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=323.94 Aligned_cols=247 Identities=19% Similarity=0.279 Sum_probs=191.6
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec--CCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED--DEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~~~lV~e 466 (680)
..||+|++|.||+|+. +|+.||||++...... .+...+.|.+|+++|++++|||||+++|++.+ .+....++|||
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKG--HKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccc--cHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 6899999999999998 6889999998654321 12334678999999999999999999999976 33225689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++.. ..++|..+++++.+++.||+|||+.. +++||||||+|||+++++.+||+|||+++.......
T Consensus 103 y~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~ 178 (283)
T PHA02988 103 YCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF 178 (283)
T ss_pred eCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhccccc
Confidence 99999999999653 46899999999999999999999732 677999999999999999999999999986543211
Q ss_pred cc-----cccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 VS-----DDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 ~~-----~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.. ...|+.... ..++.++|||||||++|||+||+.||......++...+ ........ .+..
T Consensus 179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i---~~~~~~~~---------~~~~ 246 (283)
T PHA02988 179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI---INKNNSLK---------LPLD 246 (283)
T ss_pred cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HhcCCCCC---------CCCc
Confidence 11 122333222 46788999999999999999999999865433332222 11111110 1112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
++.++.+++.+||+.||++||||+|+++.|+++..
T Consensus 247 ~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 247 CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 34678999999999999999999999999998753
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=331.32 Aligned_cols=248 Identities=19% Similarity=0.329 Sum_probs=189.8
Q ss_pred hccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCC
Q 005734 387 FSNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 459 (680)
+.+.||+|+||.||+|.. .++..||||++..... ....+.+.+|++++.++ +|||||+++|+|...+.
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~- 85 (338)
T cd05102 11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT----ASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG- 85 (338)
T ss_pred eeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc----hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC-
Confidence 348899999999999974 2456799998864321 23346789999999999 89999999999986543
Q ss_pred ceEEEEEecCCCChhhhhccCC----------------------------------------------------------
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKE---------------------------------------------------------- 481 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~---------------------------------------------------------- 481 (680)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 4689999999999999986421
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC----------ccc
Q 005734 482 --MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK----------VSD 549 (680)
Q Consensus 482 --~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~----------~~~ 549 (680)
...+++..+++++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....... ...
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 13588999999999999999999998 999999999999999999999999999986532211 012
Q ss_pred ccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHH
Q 005734 550 DIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVI 628 (680)
Q Consensus 550 ~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~ 628 (680)
..|+......++.++|||||||++|||+| |+.||.+..... .....+...... ..+......+.+++
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~l~~li 310 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE---EFCQRLKDGTRM---------RAPENATPEIYRIM 310 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH---HHHHHHhcCCCC---------CCCCCCCHHHHHHH
Confidence 23444444567899999999999999997 999997543211 111111111110 01122336789999
Q ss_pred HHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 629 KECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 629 ~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+||+.||++|||+.|+++.|+++..
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=315.96 Aligned_cols=244 Identities=17% Similarity=0.283 Sum_probs=187.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHH--HHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLK--SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
++.+|+|+||.|-+|.- ++|+.||||.++......... .......+|+++|++++|||||++++++..++ +.|+|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d--s~YmV 254 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD--SSYMV 254 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC--ceEEE
Confidence 48999999999999986 589999999997654332221 12334679999999999999999999999988 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeEEccccccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAEICFTTIA 541 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ki~DFGla~~~ 541 (680)
+|||++|+|.+.+-.+. .+....-..+++|++.|+.|||+. +|+||||||+|||+..+ ..+||+|||+|+..
T Consensus 255 lE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 255 LEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred EEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 99999999999996543 466666788999999999999999 99999999999999755 78999999999998
Q ss_pred CCCCCcc--cccccCCCCC--------CCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccC
Q 005734 542 LPKSKVS--DDIENSVLPP--------LADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 542 ~~~~~~~--~~~~~~~~~~--------~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 610 (680)
...+... -..|.|.+|+ .+..+.|+||+|||||-+++|..||.+... .++.+.+.+ ....+..
T Consensus 330 g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~---G~y~f~p--- 403 (475)
T KOG0615|consen 330 GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK---GRYAFGP--- 403 (475)
T ss_pred ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc---CcccccC---
Confidence 6433221 1223343333 223478999999999999999999986532 224433322 1111111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+..++..+++.+++..||+.|||+.|+++.
T Consensus 404 ----~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 404 ----LQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred ----hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 1223455789999999999999999999999864
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=317.50 Aligned_cols=251 Identities=15% Similarity=0.191 Sum_probs=195.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|.||.||||+. .+|+.||+|++.....+ .....-..+||.+|++++||||++|.+...+......|||+||
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~---~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeY 199 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK---EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEY 199 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEEEEEeecccCC---CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEec
Confidence 7899999999999985 68999999999876533 2344567899999999999999999999988743368999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++ +|..++.. .+-.++..++..++.|++.||.|+|+. +|+|||||.+|||||.+|.+||+|||||+++......
T Consensus 200 Mdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 200 MDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred ccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence 987 89888863 345799999999999999999999999 9999999999999999999999999999988754422
Q ss_pred c--cc-------cccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccc---------c
Q 005734 548 S--DD-------IENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC---------M 608 (680)
Q Consensus 548 ~--~~-------~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 608 (680)
. .. .|+.. ....|++..|+||.||||.||++|+..|.+..+.+....+-+....+..-.. .
T Consensus 275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~ 354 (560)
T KOG0600|consen 275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI 354 (560)
T ss_pred ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence 2 11 12222 2346789999999999999999999999887666665555555443321110 0
Q ss_pred cCcc------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 609 IDPS------LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 609 ~d~~------l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+-+. +.+.........++|+...+..||++|.|+.++++
T Consensus 355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0000 00001122357789999999999999999999885
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=314.26 Aligned_cols=245 Identities=21% Similarity=0.306 Sum_probs=189.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||.+... +|...|||.+...... ..+...+|+++|.+++|||||+.+|..........++.||
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~-----~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP-----TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeecccch-----hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 489999999999999975 4899999988765211 1556899999999999999999999855444223689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla~~~~~~~ 545 (680)
|+++|+|.+++....+ .++.....+++.+|++||+|||++ +||||||||+|||++. ++.+||+|||+++......
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999976655 799999999999999999999998 9999999999999999 7999999999998766310
Q ss_pred -----C--cc----cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 546 -----K--VS----DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 546 -----~--~~----~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
. .. ...|+....+ ....++||||+||+++||+||+.||.+. .....++....... .. |
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~-~~-----P-- 242 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED-SL-----P-- 242 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC-CC-----C--
Confidence 0 11 1123333322 2335899999999999999999999763 12233333332221 11 1
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
..+.....+..+++.+|++.+|+.|||+.++++...-.
T Consensus 243 -~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 243 -EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred -CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 12223446889999999999999999999999876543
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=320.35 Aligned_cols=240 Identities=25% Similarity=0.415 Sum_probs=183.2
Q ss_pred ccccCCCCCCeEEEEEeC-----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||.|.||.||+|.+. .+..|+||.++... .....++|.+|++.+++++||||++++|+|...+ ..+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~--~~~ 77 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS----SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE--PLF 77 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS----SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS--SEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc----ccccceeeeecccccccccccccccccccccccc--ccc
Confidence 478999999999999986 35679999885432 1334678999999999999999999999999666 579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+|+||+++|+|.++|+......++|..+++|+.|||+||+|||+. +++||||+++||++++++.+||+|||+++...
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS 154 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 999999999999999877566899999999999999999999998 89999999999999999999999999998773
Q ss_pred CCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 543 PKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 543 ~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
...... ...|+.......+.++||||||+++||++| |+.||.+....++...+...... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~----~----- 225 (259)
T PF07714_consen 155 EKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRL----P----- 225 (259)
T ss_dssp TSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEET----T-----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----e-----
Confidence 211110 111222223446889999999999999999 78998765433333333221111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
.+..++..+.+++.+||+.+|++||+|++++++|
T Consensus 226 ----~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ----IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1112336789999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=316.24 Aligned_cols=250 Identities=18% Similarity=0.321 Sum_probs=189.7
Q ss_pred hccccCCCCCCeEEEEEeCC-----------------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccce
Q 005734 387 FSNIIDTQSGCTIYKGTLSS-----------------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNL 449 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~-----------------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l 449 (680)
+.+.||+|+||.||++..++ +..||||.+..... .....+|.+|++++.+++||||+++
T Consensus 9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN----KNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC----HHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 34789999999999998532 34699998764321 3345679999999999999999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 005734 450 IGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE-----------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512 (680)
Q Consensus 450 ~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~-----------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~i 512 (680)
+|++.+.+ ..++||||+++|+|.+++.... ...++|..+++++.|++.||+|||+. +|
T Consensus 85 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 85 LGVCVDED--PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEecCC--ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 99998877 5799999999999999985321 13578999999999999999999998 99
Q ss_pred eecCCCCCCeeecCCCCeEEcccccccccCCCCC----------cccccccCCCCCCCCCCCCeeehhHHHHHHHh--CC
Q 005734 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK----------VSDDIENSVLPPLADPETNIYSFGILMLEIIS--GK 580 (680)
Q Consensus 513 vHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~----------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt--G~ 580 (680)
+||||||+|||+++++.+||+|||+++....... .....|+......+++++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999986542211 01122343344567889999999999999987 56
Q ss_pred CCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 581 LPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 581 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.||.+.........+............. ..+..++..+.+++.+||+.+|++||||.+|.+.|++
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGRQVYL------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccccccc------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 7776544344444433332221110000 0112234678999999999999999999999988863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=312.87 Aligned_cols=244 Identities=20% Similarity=0.310 Sum_probs=191.2
Q ss_pred hhccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 386 DFSNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.+.||+|+||.||+|.+. .+..||+|.++.... ....+.|.+|++++++++||||++++|++..++ ..
T Consensus 8 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~ 81 (266)
T cd05064 8 KIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS----DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN--TM 81 (266)
T ss_pred EEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC----HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC--Cc
Confidence 44589999999999999863 456899998865421 234567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++||||+++|+|.+++.... ..++|.++++++.+++.||+|||+. +++||||||+||+++.++.+|++|||.+...
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999999997533 4689999999999999999999988 9999999999999999999999999987654
Q ss_pred CCCCCc---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 542 LPKSKV---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 542 ~~~~~~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
...... ....|+......++.++|||||||++||+++ |+.||.........+.+... ...
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~----~~~------ 227 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG----FRL------ 227 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC----CCC------
Confidence 321100 1122343444567889999999999999875 99999765433333332211 100
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
..+..++..+.+++.+||+.+|++||++++|.+.|.++
T Consensus 228 ---~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 ---PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01223446789999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=316.54 Aligned_cols=250 Identities=16% Similarity=0.236 Sum_probs=198.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||.|+||.||+|+- .+|..||||+++.+... + .+--=.+|++.|+++. |||||++...+.+.+. ..++|||
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~---ee~~nLREvksL~kln~hpniikL~Evi~d~~~-~L~fVfE 90 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-W---EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR-ILYFVFE 90 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-H---HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc-eEeeeHH
Confidence 6899999999999995 57899999998765422 2 1223468999999998 9999999999988764 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||+. +|++++.++ ...++......|+.||.+||+|+|.+ +++|||+||+|||+.....+||+|||+||.......
T Consensus 91 ~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP 165 (538)
T KOG0661|consen 91 FMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP 165 (538)
T ss_pred hhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccccCCC
Confidence 9965 999999877 67899999999999999999999999 999999999999999999999999999999874432
Q ss_pred cccc-------cccC-CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc------------
Q 005734 547 VSDD-------IENS-VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS------------ 606 (680)
Q Consensus 547 ~~~~-------~~~~-~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~------------ 606 (680)
+... .||. ...++++.+.|||++|||++|+.+-+.-|.+..+.+....+-+.+..+..-.
T Consensus 166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn 245 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN 245 (538)
T ss_pred cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence 2211 2232 2346789999999999999999999999988776666555666655443211
Q ss_pred ----cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 607 ----CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 607 ----~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+....+...-..+..+..+++.+|+++||++|||+.+.+++
T Consensus 246 f~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 246 FRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred cCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111111112223366789999999999999999999999875
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=320.64 Aligned_cols=231 Identities=19% Similarity=0.347 Sum_probs=188.3
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
+.+|.|+.|.||.|+++ ++.||||+++-. -..+|+-|++++|+||+.+.|+|.... ..+||||||
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~el------------kETdIKHLRkLkH~NII~FkGVCtqsP--cyCIiMEfC 194 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVREL------------KETDIKHLRKLKHPNIITFKGVCTQSP--CYCIIMEFC 194 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhh------------hhhhHHHHHhccCcceeeEeeeecCCc--eeEEeeecc
Confidence 68999999999999996 577999876321 236788999999999999999999876 459999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC--
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK-- 546 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~-- 546 (680)
+.|-|...|+.. ..+.-.....+..+||.||.|||.+ .|||||||+-|||+..+..+||+|||-++......+
T Consensus 195 a~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkM 269 (904)
T KOG4721|consen 195 AQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKM 269 (904)
T ss_pred ccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhh
Confidence 999999999643 4688888899999999999999998 999999999999999999999999999988764322
Q ss_pred -----cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC-CCCHHH
Q 005734 547 -----VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK-SFKQNE 620 (680)
Q Consensus 547 -----~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~ 620 (680)
.....|+....+..++|.||||||||||||+||..||.+... ...+..+... .+. ..+..+
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds---sAIIwGVGsN----------sL~LpvPstc 336 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS---SAIIWGVGSN----------SLHLPVPSTC 336 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch---heeEEeccCC----------cccccCcccC
Confidence 223446666677889999999999999999999999975331 1111111110 111 235667
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
++-+.-|+++||+..|..||++++|+..|+-.
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 78899999999999999999999999998744
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=309.18 Aligned_cols=243 Identities=14% Similarity=0.274 Sum_probs=192.9
Q ss_pred hhccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.+.+.||+|++|.||+|... ++..||+|...... ....++.+|++++++++|+||++++++|.... ..++|
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 80 (263)
T cd05052 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 80 (263)
T ss_pred EEeeecCCcccceEEEEEEecCCceEEEEEecCCc------hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC--CcEEE
Confidence 44589999999999999975 58889999875322 22457899999999999999999999998877 56999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.+++.......++|..++.++.|+++||+|||.. +++||||||+||++++++.+||+|||+++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 9999999999999765556799999999999999999999998 9999999999999999999999999999876532
Q ss_pred CCc---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 545 SKV---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 545 ~~~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
... ....|+......++.++|||||||++|||+| |..||......+....+......
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------- 224 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRM------------- 224 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC-------------
Confidence 211 1122343344566788999999999999998 99998754322222222111100
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
..+...+.++.+++.+||+.+|++||++.+++++|+.+
T Consensus 225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11122346799999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=308.16 Aligned_cols=246 Identities=15% Similarity=0.277 Sum_probs=195.4
Q ss_pred HhhhhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 383 ACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 383 ~~~~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
....+.+.||+|++|.||+|...++..||||.+.... ...++|.+|++++++++|+||+++++++...+ ..+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 77 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT------MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE--PIY 77 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc------ccHHHHHHHHHHHHHCCCCCccceeEEEecCC--Cee
Confidence 3344568999999999999998888889999876432 12456899999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++++|.+++.......++|..+.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIK 154 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence 999999999999999765556789999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCc---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 543 PKSKV---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 543 ~~~~~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ....|+......++.++||||||++++||+| |+.||.+.........+.. . ....
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~---~-~~~~------ 224 (261)
T cd05068 155 EDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQ---G-YRMP------ 224 (261)
T ss_pred CCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---C-CCCC------
Confidence 22111 1122444444566889999999999999999 9999976443322222211 1 0000
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.+......+.+++.+|++.+|++||+|+++++.|+++
T Consensus 225 ---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 225 ---CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ---CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 1112336789999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=308.78 Aligned_cols=241 Identities=16% Similarity=0.299 Sum_probs=193.0
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+ ..++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 82 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT------MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE--PIYIITEY 82 (261)
T ss_pred eeecCCcCCceEEEEEecCCceEEEEEccCCc------hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--CcEEEEec
Confidence 48999999999999998888899999875432 12457899999999999999999999998777 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.++++......+++..++.++.+++.||+|||+. +++||||||+||++++++.++|+|||+++........
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 9999999999766566789999999999999999999998 9999999999999999999999999999876432111
Q ss_pred ---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 ---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
....|+.......++++|||||||++|||+| |+.||...........+...... +..
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---------~~~---- 226 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM---------PRM---- 226 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC---------CCC----
Confidence 1122333334556888999999999999999 99999765433333332211110 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
...+.++.+++.+|++.+|++||+++++.+.|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11235788999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=297.67 Aligned_cols=246 Identities=17% Similarity=0.240 Sum_probs=191.1
Q ss_pred cccCCCCCCeEEEEE-eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEE-ecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC-EDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~-~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~~~lV~e 466 (680)
+.||+|+||+|||+. +.+|..||.|.+.... .+.....+...|+.+|+.++|||||+++++- .+.+. ..+||||
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~---md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e-vlnivmE 100 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM---MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE-VLNIVME 100 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhh---ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch-hhHHHHH
Confidence 789999999999998 5799999999887432 3345567889999999999999999999954 33331 3689999
Q ss_pred ecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNP-PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~-~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||..|+|.+.+.. +....++....+++..|+++||.++|+.... -|+||||||.||++|.+|.+|++||||++.+..
T Consensus 101 ~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s 180 (375)
T KOG0591|consen 101 LCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS 180 (375)
T ss_pred hhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc
Confidence 9999999999852 3456899999999999999999999995322 289999999999999999999999999999875
Q ss_pred CCCcc---cccccCCC-----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKVS---DDIENSVL-----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~~---~~~~~~~~-----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
..... ...|.|+. ...++.||||||+||+++||..-+.||.++. ..+.-.+..+. .+. .
T Consensus 181 ~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n---~~~L~~KI~qg--d~~--------~ 247 (375)
T KOG0591|consen 181 KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN---LLSLCKKIEQG--DYP--------P 247 (375)
T ss_pred hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc---HHHHHHHHHcC--CCC--------C
Confidence 44322 12233333 3467999999999999999999999998764 33333222221 111 1
Q ss_pred CC-HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 616 FK-QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 616 ~~-~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.+ +-....+.+|+..|+..||+.||+.-.+++.+..
T Consensus 248 ~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 248 LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 22 3455789999999999999999986555554443
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=322.69 Aligned_cols=246 Identities=21% Similarity=0.320 Sum_probs=189.6
Q ss_pred hhhccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC
Q 005734 385 EDFSNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE 457 (680)
Q Consensus 385 ~~~~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 457 (680)
..+.+.||+|+||.||+|+. .++..||||+++.... ......+.+|++++..+ +|||||+++|+|.+++
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC----cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 34568999999999999974 2456899998864321 22345788999999999 8999999999999887
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------------------------------------------------
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKE-------------------------------------------------------- 481 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~-------------------------------------------------------- 481 (680)
..++|||||++|+|.++++...
T Consensus 113 --~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 113 --PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred --cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 6799999999999999986421
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 482 -----------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 482 -----------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
...++|..+++++.+|++||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 12589999999999999999999998 9999999999999999999999999999865432
Q ss_pred CCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc-ccHHHHHHHHhcCCCCcccccCcc
Q 005734 545 SKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE-LSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 545 ~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
... ....|+......++.++|||||||++|||+| |+.||..... ....+.+...... ..+
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~- 339 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM-------LSP- 339 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC-------CCC-
Confidence 111 1122444444567889999999999999998 8889865431 1222222211110 001
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
...+.++.+++.+||+.||++||+|.||++.|++.
T Consensus 340 -----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 -----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11235788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=305.31 Aligned_cols=238 Identities=17% Similarity=0.337 Sum_probs=188.3
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||++...++..+|+|.+.... ....+|.+|++++++++||||++++++|...+ ..++|||
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~iv~e 79 (256)
T cd05114 8 FMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA------MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK--PLYIVTE 79 (256)
T ss_pred EeeEecCCcCceEEEEEeccCceEEEEecccCC------ccHHHHHHHHHHHHHCCCCCceeEEEEEccCC--CEEEEEE
Confidence 447899999999999999888889999875332 12356889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++... ..++|..+++++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 80 FMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred cCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 999999999997543 3689999999999999999999998 999999999999999999999999999876542211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+......++.++||||||+++|||+| |+.||......+..+.+.. ... ...+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~---~~~----~~~~~---- 224 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR---GFR----LYRPK---- 224 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC---CCC----CCCCC----
Confidence 1 1122333334456789999999999999999 8999976543333333322 111 01111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
....++.+++.+||+.+|++||+|+++++.|
T Consensus 225 --~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 --LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1225789999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=309.83 Aligned_cols=243 Identities=13% Similarity=0.139 Sum_probs=188.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++.. .+|+.||||.+....... ......+.+|++++.+++|+||+++.+++.+.+ ..++|+|
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~--~~~lv~e 80 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKRILEKVNSRFVVSLAYAYETKD--ALCLVLT 80 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh--hhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--eEEEEEE
Confidence 37899999999999986 578999999886543221 223456889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence 99999999888654445789999999999999999999998 999999999999999999999999999987542211
Q ss_pred c-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 V-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 ~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ....|+......++.++|||||||++|||+||+.||.........+.+........ ...+..
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 227 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ----------EEYSEK 227 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc----------ccCCcc
Confidence 1 12234444455678899999999999999999999976543222222222221110 011122
Q ss_pred HHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
...++.+|+.+||+.||++||+ ++++++
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 2357889999999999999997 777775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=321.80 Aligned_cols=249 Identities=21% Similarity=0.326 Sum_probs=190.2
Q ss_pred hhhhccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecC
Q 005734 384 CEDFSNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDD 456 (680)
Q Consensus 384 ~~~~~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 456 (680)
...+.+.||+|+||.||+|+. .++..||||++..... ......+.+|+++++++ +|+|||+++|+|...
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH----TDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC----HHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 334558999999999999874 2345799998865432 22345688999999999 899999999999987
Q ss_pred CCCceEEEEEecCCCChhhhhccCC-------------------------------------------------------
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKE------------------------------------------------------- 481 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~------------------------------------------------------- 481 (680)
+ ..++||||+++|+|.++++...
T Consensus 115 ~--~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 115 G--PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred C--CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 7 6799999999999999985321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc-
Q 005734 482 -------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV- 547 (680)
Q Consensus 482 -------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~- 547 (680)
...+++.+.++|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 12478999999999999999999998 9999999999999999999999999999865422110
Q ss_pred ---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 ---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
....|+......++.++|||||||++|||+| |+.||........ ........... ..+
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~---~~~~~~~~~~~---~~~------ 337 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK---FYKMVKRGYQM---SRP------ 337 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH---HHHHHHcccCc---cCC------
Confidence 1122343444567899999999999999997 9999975432111 11111111000 001
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
...+.++.+++.+||+.||++||++.+|++.|+++.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 112357899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=331.31 Aligned_cols=245 Identities=16% Similarity=0.298 Sum_probs=199.2
Q ss_pred ccccCCCCCCeEEEEEe-CCCC----EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGV----EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~----~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
..+||.|+||+||||.+ ++|+ +||+|++..... .+...+|.+|+-.|.+++|||++||+|+|.... ..
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~----~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~q 773 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS----PKASIELLDEALRMASLDHPNLLRLLGVCMLST---LQ 773 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCC----chhhHHHHHHHHHHhcCCCchHHHHhhhcccch---HH
Confidence 37999999999999986 5564 567777654432 334578999999999999999999999998765 57
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
||++|||.|+|.++++..+ ..+--...+.|..|||+||.|||.+ ++|||||.++|||+..-..+||.|||+++.+.
T Consensus 774 lvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 9999999999999998643 5688889999999999999999988 99999999999999999999999999999987
Q ss_pred CCCCccccc----------ccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 543 PKSKVSDDI----------ENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 543 ~~~~~~~~~----------~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
++....... -+......++.++|||||||++||++| |..||++....++.+.++ .++.+
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle----~geRL------ 919 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE----KGERL------ 919 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh----ccccC------
Confidence 543221111 122334578999999999999999999 999999876545544433 32222
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
..++.+...+..++.+||..|++.||+++++..++.+....+
T Consensus 920 ---sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 920 ---SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred ---CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 234556688999999999999999999999999998886544
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=302.53 Aligned_cols=244 Identities=18% Similarity=0.338 Sum_probs=191.8
Q ss_pred hhccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 386 DFSNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.+.||+|+||+||+|.+.. ...||||.+.... ......+|.+|+.++++++|+||+++++++...+ ..
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 80 (266)
T cd05033 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS----SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR--PV 80 (266)
T ss_pred eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC----ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC--ce
Confidence 345899999999999999742 3578999875433 1334567999999999999999999999998877 57
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++||||+++|+|.+++.... ..++|..+++++.+++.||+|||+. +|+||||||+||++++++.++|+|||+++..
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 81 MIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 99999999999999996543 3789999999999999999999998 9999999999999999999999999999877
Q ss_pred CCCC-Cc---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 542 LPKS-KV---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 542 ~~~~-~~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
.... .. ....|+......++.++||||||+++|||++ |..||.........+.+...... .
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----~---- 228 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL----P---- 228 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----C----
Confidence 4111 00 1122333334556889999999999999998 99999754433333332211111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.+..++..+.+++.+||+.+|++||++++|++.|+++
T Consensus 229 -----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 -----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0112336788999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=303.41 Aligned_cols=242 Identities=17% Similarity=0.319 Sum_probs=194.4
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||.|+||.||+|...++..+++|.+.... .....++..|++++++++|+||+++++++.+.+ ..++||||
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 83 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE--PVYIITEL 83 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccc-----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCC--CeEEEEee
Confidence 38999999999999999889999999886543 223456889999999999999999999998877 56999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++.++.+++.+++.||+|||+. +|+||||||+||++++++.+||+|||++.........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 9999999999866666799999999999999999999988 8999999999999999999999999999776432111
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ...|+......++.++||||||++++||++ |+.||...........+...... ..+.
T Consensus 161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~~ 227 (261)
T cd05148 161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM-------------PCPA 227 (261)
T ss_pred ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC-------------CCCC
Confidence 1 112333334567888999999999999999 89999765433333332211111 0112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.++..+.+++.+||+.+|++|||++++++.|+.+
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 228 KCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 2336788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=311.94 Aligned_cols=243 Identities=14% Similarity=0.282 Sum_probs=188.7
Q ss_pred cccCCCCCCeEEEEEeC-CCC----EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGV----EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~----~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||.||+|++. +|. .||||++..... ....++|..|+.+++.++||||++++|+|.... .++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~---~~~ 85 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS----PKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQL 85 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC---cee
Confidence 88999999999999864 444 378888753321 234567899999999999999999999998653 579
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++.... ..+++..+++++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccC
Confidence 999999999999997543 4689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.... ....++......++.++|||||||++|||+| |+.||.+.....+..... ......
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~----~~~~~~------ 231 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE----KGERLP------ 231 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh----CCCCCC------
Confidence 2111 1112333334556889999999999999998 999997644333322222 111110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+..+..++.+++.+||+.+|++||++.+++..+..+...
T Consensus 232 ---~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 232 ---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred ---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 0111235788999999999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=289.72 Aligned_cols=249 Identities=14% Similarity=0.238 Sum_probs=189.6
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..+|+|+||.|||++.+ +|+.||||++.-... ++...+-.++|+++|+.++|+|+|.|+.+|.... ..+||+||
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed---d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr--klhLVFE~ 82 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED---DPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR--KLHLVFEY 82 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCc---cHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc--eeEEEeee
Confidence 57899999999999985 699999999864332 2445566889999999999999999999999887 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC-CCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP-KSK 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~-~~~ 546 (680)
|+.- +.+-|. +....++.....+++.|+++|+.|+|+. +++||||||+|||++.++.+|++|||+|+.+.. ...
T Consensus 83 ~dhT-vL~eLe-~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~ 157 (396)
T KOG0593|consen 83 CDHT-VLHELE-RYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDN 157 (396)
T ss_pred cchH-HHHHHH-hccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcch
Confidence 9874 444443 2334688999999999999999999999 999999999999999999999999999999873 222
Q ss_pred cccc-------cccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-----------CCccc
Q 005734 547 VSDD-------IENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-----------RNFSC 607 (680)
Q Consensus 547 ~~~~-------~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 607 (680)
+... .|+... ...+.+..|||+.||++.||+||..-|.+..+.+..-.++..+..- ..+..
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G 237 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence 2211 122221 2467888999999999999999999998877766655555544321 11111
Q ss_pred ccCcccCC---C---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKS---F---KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~---~---~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.-|.... . -.....-+.+++..|++.||++|++-++++.
T Consensus 238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111111 0 0122346789999999999999999999874
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=306.92 Aligned_cols=244 Identities=20% Similarity=0.363 Sum_probs=191.1
Q ss_pred hccccCCCCCCeEEEEEeCC------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 387 FSNIIDTQSGCTIYKGTLSS------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
+.+.||+|+||.||+|.... ...|++|.+..... .....+|.+|++++.+++||||+++++++...+ .
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~----~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~ 82 (283)
T cd05048 9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE----PKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--P 82 (283)
T ss_pred hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC----HHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC--c
Confidence 34889999999999998642 25688888754321 234567999999999999999999999998776 5
Q ss_pred eEEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEM--------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~--------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 526 (680)
.+++|||+++|+|.+++..... ..+++..++.++.+++.||+|||+. +++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 7999999999999999964311 4689999999999999999999998 9999999999999999
Q ss_pred CCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHH
Q 005734 527 DYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWA 595 (680)
Q Consensus 527 ~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~ 595 (680)
++.+||+|||+++........ ....|+......+++++|||||||++|||+| |+.||.+....++...+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999999999765322110 1122444444567889999999999999998 99999765433333332
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.. . . . ...+..++.++.+|+.+||+.+|++||++.||+++|+++
T Consensus 240 ~~---~-~-~--------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 RS---R-Q-L--------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred Hc---C-C-c--------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 21 1 0 0 011233457899999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=304.17 Aligned_cols=246 Identities=19% Similarity=0.320 Sum_probs=187.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCE----EEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVE----IAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~----vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+|+.. +|.. +++|.+.... ......++..|+..+++++||||++++|++... ..+
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~---~~~ 84 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS----GRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA---SLQ 84 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc----chHHHHHHHHHHHHHhcCCCCCcceEEEEECCC---ccE
Confidence 378999999999999973 4553 5556553221 123345788899999999999999999998643 357
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+++||+++|+|.++++... ..++|..++.|+.|++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 85 ~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 9999999999999997433 4689999999999999999999998 89999999999999999999999999998654
Q ss_pred CCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 543 PKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 543 ~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ....|+......++.++|||||||++||++| |+.||.+.......+.+... .... .+
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~---~~ 233 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG----ERLA---QP 233 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC----CcCC---CC
Confidence 32110 0112333334457889999999999999998 99999765433333333211 1110 11
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
. .+...+.+++.+||..+|++||++.|+++.|+.+...++
T Consensus 234 ~------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~ 273 (279)
T cd05111 234 Q------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPP 273 (279)
T ss_pred C------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCc
Confidence 1 123567889999999999999999999999999876553
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=301.32 Aligned_cols=256 Identities=20% Similarity=0.352 Sum_probs=188.7
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHc--CCCCcccceeeEEecCC--CCceE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR--INHKNFVNLIGYCEDDE--PFNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~--~~~~~ 462 (680)
+.++||+|+||.||||.+.+ +.||||++... ....|..|-++.+- ++|+||++++++-.... ..+.+
T Consensus 214 l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~--------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ--------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred hHHHhhcCccceeehhhccC-ceeEEEecCHH--------HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 34789999999999999964 88999998643 34567777777665 48999999999876443 23569
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC------CCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE------LNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~------~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
||+||.++|+|.++|..+ .++|....+||..+|+||+|||++ .+|+|+|||||++|||+..|+++.|+|||
T Consensus 285 LVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred EEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999999999643 689999999999999999999976 46899999999999999999999999999
Q ss_pred cccccCCCCCcccccc-----cCCCCCC-----------CCCCCCeeehhHHHHHHHhCCCCCC-ccc------------
Q 005734 537 FTTIALPKSKVSDDIE-----NSVLPPL-----------ADPETNIYSFGILMLEIISGKLPYC-EEK------------ 587 (680)
Q Consensus 537 la~~~~~~~~~~~~~~-----~~~~~~~-----------~s~~sDVySfGvvllElltG~~p~~-~~~------------ 587 (680)
+|..+.+......... .|++|+. +=.+.||||.|.|||||+++..-.+ +..
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 9998875433222221 2222211 1123899999999999999754332 100
Q ss_pred -cccHHHHHHHHhcCCCCcccccCcccCCC--CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCC
Q 005734 588 -ELSIEKWAADYLNEPRNFSCMIDPSLKSF--KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQA 660 (680)
Q Consensus 588 -~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~ 660 (680)
.-.+.+.-...+++. ..|.+.+. ....+.-+++.+..||..||+.|.|+.-|.+++.++....+.+.
T Consensus 442 ~hPt~e~mq~~VV~kK------~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~~~ 511 (534)
T KOG3653|consen 442 NHPTLEEMQELVVRKK------QRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWEDSS 511 (534)
T ss_pred CCCCHHHHHHHHHhhc------cCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCccC
Confidence 011222211222221 11222211 12456788999999999999999999999999999988776533
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=300.69 Aligned_cols=239 Identities=16% Similarity=0.303 Sum_probs=186.3
Q ss_pred ccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.||+|+||.||+|++. ++..||||+...... +...++|.+|++++++++|+||++++++|..+ ..++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~----~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~---~~~lv~e 74 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE----KSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE---ALMLVME 74 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC----hHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC---CeEEEEE
Confidence 3899999999999863 456799998864431 33456799999999999999999999998643 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++..+++++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 75 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 150 (257)
T cd05115 75 MASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS 150 (257)
T ss_pred eCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcc
Confidence 99999999998643 34689999999999999999999998 999999999999999999999999999976542211
Q ss_pred c-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 V-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. ....|+......++.++|||||||++||+++ |+.||.+....++...+... ...
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~----~~~--------- 217 (257)
T cd05115 151 YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG----KRL--------- 217 (257)
T ss_pred ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC----CCC---------
Confidence 0 0112232233456789999999999999997 99999765443333333221 110
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
..+..+..++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11122346888999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=299.40 Aligned_cols=240 Identities=18% Similarity=0.313 Sum_probs=187.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +|+.+|+|...... ..+....|.+|++++++++||||++++++|.... ..++|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL----PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC--CeEEEEee
Confidence 46899999999999974 78899999875332 1334567999999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++... ...++|..++.++.|++.||+|||+. +|+||||||+||+++.++.+|++|||++.........
T Consensus 75 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 75 VQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA 150 (252)
T ss_pred ccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccc
Confidence 9999999999643 34689999999999999999999998 9999999999999999999999999998764422111
Q ss_pred c----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 548 S----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 548 ~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ...|+.......+.++||||||+++|||++ |..||...........+..... . ..
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~----~---------~~ 217 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR----L---------PC 217 (252)
T ss_pred ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC----C---------CC
Confidence 0 112333334456788999999999999998 8888865432222222211100 0 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
+...+.++.+++.+|++.+|++||++.+|.++|++
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 12234678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=305.64 Aligned_cols=247 Identities=16% Similarity=0.302 Sum_probs=192.6
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+.. ++..+++|.+.... ....+.|.+|++++++++|+||+++++++...+ ..
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 82 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-----LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD--PL 82 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-----HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC--ce
Confidence 489999999999999852 34568888775433 233467899999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD 527 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 527 (680)
++||||+++|+|.+++.... ...++|..+++++.+++.||+|||+. +|+||||||+||+++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 99999999999999996432 23589999999999999999999998 99999999999999999
Q ss_pred CCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHH
Q 005734 528 YAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAA 596 (680)
Q Consensus 528 ~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~ 596 (680)
+.+||+|||+++........ ....|+......++.++||||||+++|||+| |+.||.........+..
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~- 238 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI- 238 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-
Confidence 99999999999765422110 1122444444566889999999999999999 99998764433222221
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
.... .. ......+..+.+++.+||+.+|++||++++|+++|+++.+..+
T Consensus 239 ---~~~~-~~--------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 239 ---TQGR-VL--------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred ---hCCC-CC--------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence 1111 10 0111234678999999999999999999999999999976544
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=314.33 Aligned_cols=254 Identities=20% Similarity=0.312 Sum_probs=202.4
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
++.++.....++||.|-||.||+|+.. .|..+||.+...+. +.+.+..+.|.+|..+|++++|||||+|+|.|.+
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~--d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKT--DCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhcc--CCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 445555555689999999999999963 45554443332222 2234456789999999999999999999999987
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
.. .+||||.++.|.|.++|..+ ...|+......++.||+.||+|||+. ++|||||..+|||+.....+|++||
T Consensus 463 ~P---~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 463 QP---MWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred cc---eeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 54 58999999999999999744 35789999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 536 CFTTIALPKSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 536 Gla~~~~~~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
|+++.+.....+. ...|++.-..+++.++|||-|||.+||++. |.+||.+....++.-.+ ..++.
T Consensus 536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i----EnGeR- 610 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI----ENGER- 610 (974)
T ss_pred chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe----cCCCC-
Confidence 9999887554332 223555556688999999999999999998 99999875433322111 11111
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
...++.|+..+..|+.+||+.+|.+||++.++...|.++..
T Consensus 611 --------lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 611 --------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred --------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 12456788899999999999999999999999999988865
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=305.26 Aligned_cols=244 Identities=19% Similarity=0.345 Sum_probs=189.7
Q ss_pred hhccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 386 DFSNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
.+.+.||+|+||.||+|+. .++..|++|.+..... .....+|.+|++++++++||||+++++++..+. .
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~ 81 (283)
T cd05090 8 RFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN----PQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ--P 81 (283)
T ss_pred eeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC----HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC--c
Confidence 4458999999999999985 3567899998864321 233467899999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 005734 461 RMMVFEYAPNGTVFEHLHIKE---------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~---------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 525 (680)
.++||||+++|+|.+++..+. ...+++.+.+.++.+++.||+|||+. +++||||||+||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIG 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEc
Confidence 799999999999999985321 23588999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHH
Q 005734 526 DDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKW 594 (680)
Q Consensus 526 ~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~ 594 (680)
+++.+||+|||+++........ ....|+......++.++|||||||++|||+| |..||.+.....+.+.
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9999999999999865422110 0122343344567889999999999999999 9999876443333333
Q ss_pred HHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 595 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
+... ... ..+.....++.+++.+||+.+|++||++.+|.++|+.
T Consensus 239 ~~~~----~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VRKR----QLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHcC----CcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 3221 110 0111233678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=300.23 Aligned_cols=247 Identities=17% Similarity=0.343 Sum_probs=191.1
Q ss_pred hccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----
Q 005734 387 FSNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---- 458 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---- 458 (680)
+.+.||+|+||.||+|+... +..||||++...... ......+.+|++.+++++|+||+++++++.....
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT---YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC---HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 34789999999999998742 367999988653321 2345679999999999999999999999876542
Q ss_pred CceEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcc
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIK----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~D 534 (680)
...++|+||+++|+|..++... ....+++.....++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 1368999999999999998532 234689999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCC
Q 005734 535 ICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603 (680)
Q Consensus 535 FGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~ 603 (680)
||+++........ ....++.......++++||||||+++|||++ |..||.+.....+.+.+.. . .
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~---~-~ 232 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH---G-N 232 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc---C-C
Confidence 9999876432111 1112333444567889999999999999999 8899876543333333221 1 1
Q ss_pred CcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 604 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.. ..+.....++.+++.+||+.+|++||++.||++.|+++
T Consensus 233 ~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 RL---------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC---------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10 11122346889999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=309.03 Aligned_cols=236 Identities=15% Similarity=0.168 Sum_probs=184.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||.||+++. .+|+.||||++..... ........+.+|++++++++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~e~ 76 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI--IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD--RLCFVMEY 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC--EEEEEEeC
Confidence 4689999999999987 4789999998864321 11234456889999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 151 (323)
T cd05571 77 ANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT 151 (323)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc
Confidence 9999999998643 3689999999999999999999998 999999999999999999999999999876432111
Q ss_pred -------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 -------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 -------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.....|+......++.++|||||||++|||+||+.||.......... ........+ +..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~---~~~~~~~~~-----------p~~ 217 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE---LILMEEIRF-----------PRT 217 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHH---HHHcCCCCC-----------CCC
Confidence 11122344444557889999999999999999999997543222222 222221111 112
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
...++.+++.+|++.||++|| ++.++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 235788999999999999999 7888875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=300.25 Aligned_cols=243 Identities=19% Similarity=0.336 Sum_probs=189.8
Q ss_pred hccccCCCCCCeEEEEEeC-CC---CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SG---VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g---~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
..+.||+|+||.||+|+.. ++ ..++||.+..... .....+|..|++++++++|+|++++.+++...+ ..+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 82 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT----EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK--PAM 82 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC----HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC--CcE
Confidence 3489999999999999975 33 3688888754321 233567899999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..++|.++.+++.+++.||+|||+. +++||||||+||++++++.+|++|||++....
T Consensus 83 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 83 IITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999999996543 4689999999999999999999998 99999999999999999999999999987664
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
...... ...|+......++.++|||||||++||++| |+.||...........+... ....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~----~~~~---- 230 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG----FRLP---- 230 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC----CCCC----
Confidence 221110 112333333456788999999999999998 99999754433332222211 1111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.....+.++.+++.+||+.+|++||+|.+|++.|+++
T Consensus 231 -----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 231 -----APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0112336789999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=299.14 Aligned_cols=238 Identities=18% Similarity=0.287 Sum_probs=185.9
Q ss_pred ccCCCCCCeEEEEEe---CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTL---SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~---~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.||+|+||.||+|.+ +++..+|+|++..... .....++|..|+.++++++|+||++++|++... ..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN---DPALKDELLREANVMQQLDNPYIVRMIGICEAE---SWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC---cHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CcEEEEe
Confidence 589999999999975 3678899998764432 134466799999999999999999999998643 4589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+.+++.|++.||+|||.. +|+||||||+||++++++.+||+|||+++.......
T Consensus 76 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~ 150 (257)
T cd05116 76 LAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN 150 (257)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCC
Confidence 99999999999643 3689999999999999999999988 999999999999999999999999999987643221
Q ss_pred c-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 V-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. ....|+.......+.++|||||||++|||+| |+.||.......+.+.+... ...
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~----~~~--------- 217 (257)
T cd05116 151 YYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG----ERM--------- 217 (257)
T ss_pred eeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC----CCC---------
Confidence 1 0111222223456778999999999999998 99999765433333333211 100
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
..+.....++.+++.+||+.+|++||+|.+|.+.|++
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 0112234678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=317.16 Aligned_cols=248 Identities=17% Similarity=0.295 Sum_probs=189.7
Q ss_pred hhccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCC
Q 005734 386 DFSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEP 458 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~ 458 (680)
.+.++||+|+||.||+|+.. .+..||||++..... ......|.+|++++++++ |||||+++|+|.+.+
T Consensus 40 ~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~- 114 (400)
T cd05105 40 VLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR----SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG- 114 (400)
T ss_pred ehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC----hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-
Confidence 34589999999999999852 234699998864321 233457999999999996 999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCC---------------------------------------------------------
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKE--------------------------------------------------------- 481 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~--------------------------------------------------------- 481 (680)
..++|||||++|+|.++++...
T Consensus 115 -~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 115 -PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred -ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 6799999999999999886421
Q ss_pred -------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005734 482 -------------------------------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524 (680)
Q Consensus 482 -------------------------------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 524 (680)
...++|..+++++.|+++||+|||+. +|+||||||+|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEE
Confidence 13588999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHH
Q 005734 525 TDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEK 593 (680)
Q Consensus 525 d~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~ 593 (680)
++++.+||+|||+++........ ....|+......+++++|||||||++|||++ |..||........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-- 348 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-- 348 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--
Confidence 99999999999999865422111 1122444444567889999999999999997 9999875321111
Q ss_pred HHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 594 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
........... ..+...+.++.+++.+||+.+|++||++.+|+++|+++.+
T Consensus 349 -~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 349 -FYNKIKSGYRM---------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred -HHHHHhcCCCC---------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11111111110 0112234678999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=297.59 Aligned_cols=246 Identities=19% Similarity=0.280 Sum_probs=192.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||.|..++||+|.. +.+..||||++....... ...+..+|++.|+.++|||||+++..|..+. +.++||.
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~----~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--~LWvVmp 104 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN----DLDALRKEVQTMSLIDHPNIVTYHCSFVVDS--ELWVVMP 104 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh----hHHHHHHHHHHhhhcCCCCcceEEEEEEecc--eeEEeeh
Confidence 48999999999999994 678999999998765432 2567899999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||.+||+.+++...-...++...+..|..++.+||.|||+. +.||||||+.|||||++|.+||+|||.+-.+.....
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999876666799999999999999999999999 999999999999999999999999998776654321
Q ss_pred cc-------cccccCCCCC-------CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc--ccccC
Q 005734 547 VS-------DDIENSVLPP-------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF--SCMID 610 (680)
Q Consensus 547 ~~-------~~~~~~~~~~-------~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~d 610 (680)
.. ...+.+.+|+ -|+.|+|||||||+.+||.+|..||....+. +.+...++..... ....|
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm---kvLl~tLqn~pp~~~t~~~~ 258 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM---KVLLLTLQNDPPTLLTSGLD 258 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH---HHHHHHhcCCCCCcccccCC
Confidence 11 1112222222 3688899999999999999999999865432 2222223321110 00111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. +........+.+++..|++.||++|||++++++.
T Consensus 259 ~---d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 259 K---DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred h---HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1 1111233588999999999999999999999864
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=300.65 Aligned_cols=247 Identities=15% Similarity=0.294 Sum_probs=186.5
Q ss_pred hccccCCCCCCeEEEEEeCCC-C--EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CC
Q 005734 387 FSNIIDTQSGCTIYKGTLSSG-V--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PF 459 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g-~--~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~ 459 (680)
+.+.||+|+||.||+|...+. . .+|||.++.... .......|..|++++++++|+||++++++|.... ..
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC---TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 347899999999999997543 2 588887764321 1334567899999999999999999999986432 11
Q ss_pred ceEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
..++++||+++|+|.+++... ....++|.....++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 458999999999999987421 234589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCc-----c-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCC
Q 005734 536 CFTTIALPKSKV-----S-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 536 Gla~~~~~~~~~-----~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
|+++........ . ...++......+++++||||||+++|||++ |+.||.......+.+.+ .....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~----~~~~~ 232 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYL----RQGNR 232 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----HcCCC
Confidence 999876432110 0 111223334456889999999999999999 88898754433222222 11111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.. .....+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 233 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 LK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 10 1112335688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=298.82 Aligned_cols=239 Identities=18% Similarity=0.318 Sum_probs=187.7
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|++|+||+|...++..+|||.+..... ...+|.+|++++.+++||||++++++|.... ..++|||
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM------SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR--PIYIVTE 79 (256)
T ss_pred EeeEecCcccceEEEEEecCCCcEEEEEcCCCcc------cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--CcEEEEE
Confidence 3478999999999999988777899998764321 1356899999999999999999999998776 5699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.... ..++|.++++++.+++.||+|||+. +++|+||||+||++++++.+||+|||.++.......
T Consensus 80 ~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 80 YMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred cCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 999999999996543 3689999999999999999999998 999999999999999999999999999876543211
Q ss_pred cc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 VS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...|+......++.++|||||||++|||+| |+.||...........+. ...... .
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~---~~~~~~----------~ 222 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS---QGLRLY----------R 222 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh---cCCCCC----------C
Confidence 11 112333333456889999999999999999 999997544333322222 111100 0
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
+......+.+++.+||+.+|++||++.+++..|+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1112367899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=307.30 Aligned_cols=234 Identities=15% Similarity=0.176 Sum_probs=182.1
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
||+|+||.||+++.. +++.||+|++..... ........+.+|++++.+++|||||++++++.+.+ ..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~ 76 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI--VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE--KLYLVLAFIN 76 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC--eEEEEEcCCC
Confidence 799999999999975 678899998864321 12334567889999999999999999999998877 7799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc--
Q 005734 470 NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV-- 547 (680)
Q Consensus 470 ~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~-- 547 (680)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 77 ~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 151 (312)
T cd05585 77 GGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTN 151 (312)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccc
Confidence 99999999643 3689999999999999999999998 9999999999999999999999999999864322111
Q ss_pred ------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 548 ------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 ------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
....|+......++.++|||||||++|||+||+.||.... ..+........+..+. ....
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~---~~~~~~~~~~~~~~~~-----------~~~~ 217 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN---VNEMYRKILQEPLRFP-----------DGFD 217 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC---HHHHHHHHHcCCCCCC-----------CcCC
Confidence 1122333334456889999999999999999999997543 2333333333322111 1223
Q ss_pred HHHHHHHHHccccCCCCCCC---HHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRPT---MNDIIV 647 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPt---m~ev~~ 647 (680)
.++.+++.+|++.||++||+ +.|++.
T Consensus 218 ~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 218 RDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 57889999999999999986 455543
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=280.71 Aligned_cols=250 Identities=14% Similarity=0.219 Sum_probs=197.4
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.+|+|.||.||+|+. .+|+.||||+++....++ .......+|++.|+.++|+||+.++.++-... ...||+||
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd---Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~--~l~lVfEf 82 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD---GINRTALREIKLLQELKHPNIIELIDVFPHKS--NLSLVFEF 82 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeecccccc---CccHHHHHHHHHHHHccCcchhhhhhhccCCC--ceEEEEEe
Confidence 6899999999999995 589999999998775432 23456889999999999999999999998877 67899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|+. +|+..++++. ..++-.+...++.++.+|++|||.. .|+||||||.|+|+++++..||+|||+|+........
T Consensus 83 m~t-dLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 83 MPT-DLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred ccc-cHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 976 9999997654 5789999999999999999999999 8999999999999999999999999999998743222
Q ss_pred cc---c-----cccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc-----cccC---
Q 005734 548 SD---D-----IENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS-----CMID--- 610 (680)
Q Consensus 548 ~~---~-----~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d--- 610 (680)
.. . .|+.. ....++...||||.|||+.||+-|.+-|.+..+.+....+-..+..+..-. .+-|
T Consensus 158 ~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~ 237 (318)
T KOG0659|consen 158 QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVK 237 (318)
T ss_pred cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHH
Confidence 11 1 12221 124678889999999999999999988888777666666666655432111 1100
Q ss_pred ------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 ------PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ------~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.+......+.....+++..++..+|.+|++++|++++
T Consensus 238 ~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 238 IQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 00011122344667999999999999999999999864
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=304.33 Aligned_cols=246 Identities=18% Similarity=0.284 Sum_probs=190.4
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+.. ....+++|.+..... .....++.+|++++++++||||++++++|...+ ..
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 78 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS----SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG--PL 78 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC----HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--Cc
Confidence 378999999999999853 235688887754331 223467999999999999999999999998877 56
Q ss_pred EEEEEecCCCChhhhhccC----------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 462 MMVFEYAPNGTVFEHLHIK----------------------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~----------------------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
++|+||+++|+|.+++... ....++|..++.++.+++.||+|||+. +|+||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 9999999999999997532 123589999999999999999999988 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~ 588 (680)
+||++++++.+||+|||+++........ ....|+......++.++||||||++++||+| |+.||.+..+
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999999765322110 1112333334457888999999999999999 9999976544
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..+.+.+...... . .+.....++.+++.+|++.+|++||+++++++.|+++...
T Consensus 236 ~~~~~~~~~~~~~----~---------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 236 ERLFNLLKTGYRM----E---------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred HHHHHHHhCCCCC----C---------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 4433333221111 0 1112235788999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=302.97 Aligned_cols=245 Identities=18% Similarity=0.319 Sum_probs=191.7
Q ss_pred hhhccccCCCCCCeEEEEEeCC------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC
Q 005734 385 EDFSNIIDTQSGCTIYKGTLSS------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 385 ~~~~~~iG~G~~g~Vyk~~~~~------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 458 (680)
..+.+.||+|+||.||+|...+ +..||||.+..... .+....|.+|++++.+++|+||+++++++....
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 81 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS----NDARKDFEREAELLTNFQHENIVKFYGVCTEGD- 81 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC----HHHHHHHHHHHHHHHhcCCCCchheeeEEecCC-
Confidence 3445899999999999998743 47899998764332 224568999999999999999999999999876
Q ss_pred CceEEEEEecCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKE------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 526 (680)
..++||||+++|+|.++++... ...+++.+...++.+++.|++|||.. +++||||||+||+++.
T Consensus 82 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~ 157 (280)
T cd05049 82 -PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGY 157 (280)
T ss_pred -CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcC
Confidence 6799999999999999996432 24589999999999999999999998 9999999999999999
Q ss_pred CCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHH
Q 005734 527 DYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWA 595 (680)
Q Consensus 527 ~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~ 595 (680)
++.+||+|||+++........ ....|+......+++++|||||||++|||+| |+.||.........+.+
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECI 237 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 999999999998764322110 1123444444567889999999999999999 99998764433333332
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
. .. ... ..+...+..+.+++.+||+.+|++||++.||++.|++
T Consensus 238 ~---~~--~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 238 T---QG--RLL--------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred H---cC--CcC--------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 2 11 000 0111233678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=308.12 Aligned_cols=241 Identities=20% Similarity=0.296 Sum_probs=191.3
Q ss_pred hhhccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceE
Q 005734 385 EDFSNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 385 ~~~~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 462 (680)
..|.++||+|+|.+||+|+- .+++++|||++.++..-. +...+....|-++|.++ .||.||+|+-.+.+.. ..|
T Consensus 75 F~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iik--e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--sLY 150 (604)
T KOG0592|consen 75 FKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIK--EKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--SLY 150 (604)
T ss_pred cchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHh--hcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc--ceE
Confidence 34679999999999999996 478999999987544221 22345677899999999 8999999999999887 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
.|+||++||+|.++|+.. ..++......+|.+|..||+|||+. +||||||||+|||||+||++||+|||-|+.+.
T Consensus 151 FvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999999999644 4688888888999999999999999 99999999999999999999999999999987
Q ss_pred CCCCcc----------c------cc-----ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC
Q 005734 543 PKSKVS----------D------DI-----ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 543 ~~~~~~----------~------~~-----~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
+..... . .. ||.......++.+|+|+||||||.|+.|++||....+..+.+.+...-
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~-- 303 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD-- 303 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc--
Confidence 432210 0 00 222234456778999999999999999999998776544444333221
Q ss_pred CCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 602 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.. +++..++.+.+|+.+.+..||.+|+|.++|-+.
T Consensus 304 -y~-----------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 304 -YE-----------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -cc-----------CCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11 222233678899999999999999999888764
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=303.27 Aligned_cols=255 Identities=15% Similarity=0.259 Sum_probs=189.5
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||+||.+.. .++..||+|.+..... ......|.+|++++++++||||++++++|...+....+
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG----QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 47899999999988653 4678899998864421 22356788999999999999999999998765433578
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... .++|.++..++.++++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 85 lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999999643 489999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhc--CCCCccccc
Q 005734 543 PKSKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN--EPRNFSCMI 609 (680)
Q Consensus 543 ~~~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 609 (680)
..... ....|+.......+.++||||||++++||+||+.|+..... ...+....... ........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK-KFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcc-hhhhhhcccccccchhhhhhhh
Confidence 32110 01123333345678899999999999999999999864321 11111100000 000011111
Q ss_pred CcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 610 DPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 610 d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
+.... ..+...+.++.+++.+||+.+|++|||+++|++.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11110 112334578999999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=297.97 Aligned_cols=242 Identities=19% Similarity=0.334 Sum_probs=189.8
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.+.||+|+||.||++... |..+++|...... ..+.|.+|+.++++++|+|++++++++...+. ..++|+
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv~ 79 (256)
T cd05082 9 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 79 (256)
T ss_pred eeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-------hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC-ceEEEE
Confidence 34589999999999999875 7779999875322 24568999999999999999999998765432 579999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++.......++|..+++++.+++.||+|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence 999999999999766555689999999999999999999998 99999999999999999999999999988654322
Q ss_pred Ccc-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 546 KVS-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 546 ~~~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
... ...|+......++.++||||||+++|||++ |+.||......++...+...... .....
T Consensus 157 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~ 223 (256)
T cd05082 157 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-------------DAPDG 223 (256)
T ss_pred CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC-------------CCCCC
Confidence 111 122344444567889999999999999998 99998754322233222211100 01122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.+..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 224 CPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 346788999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=294.97 Aligned_cols=235 Identities=21% Similarity=0.316 Sum_probs=188.3
Q ss_pred hhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 385 EDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 385 ~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
++|. ++||+|+||+||.++-+ +++.+|+|+++++.... ....+...+|..+|.+++||.||+++-.+++.+ ..
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~--~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~--kL 100 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVE--KKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE--KL 100 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhh--hhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC--eE
Confidence 3454 99999999999999864 68899999997665332 234667889999999999999999998888887 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
|+|+||+.||.|.-+|... ..++.....-++.+|+.||.|||+. +||||||||+|||||++|+++|+||||++..
T Consensus 101 ylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 9999999999999999643 3688887778899999999999999 9999999999999999999999999999976
Q ss_pred CCCCCccc---ccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 542 LPKSKVSD---DIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 542 ~~~~~~~~---~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
...+.... ..++|.+| ..++..+|.||+||++|||+||..||... +..++.+...+.+....
T Consensus 176 ~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~---~~~~~~~~I~~~k~~~~------- 245 (357)
T KOG0598|consen 176 LKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE---DVKKMYDKILKGKLPLP------- 245 (357)
T ss_pred ccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc---cHHHHHHHHhcCcCCCC-------
Confidence 54432222 23445443 46788899999999999999999999864 34555555555431111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCC
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPT 641 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt 641 (680)
+.-...+..+++...+..||++|..
T Consensus 246 ---p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 246 ---PGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred ---CccCCHHHHHHHHHHhccCHHHhcC
Confidence 1112257889999999999999963
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=303.60 Aligned_cols=247 Identities=15% Similarity=0.273 Sum_probs=191.8
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
+.+.||+|+||.||++... ++..+|+|.+.... ......+.+|++++++++|+||+++++++...+ .
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~ 81 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--P 81 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-----HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--c
Confidence 3488999999999999852 34568888775432 234567999999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIKE-----------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA 529 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~-----------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 529 (680)
.++||||+++|+|.+++.... ...+++..+++++.|++.||+|||+. +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 799999999999999986322 23589999999999999999999998 9999999999999999999
Q ss_pred eEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHH
Q 005734 530 AKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADY 598 (680)
Q Consensus 530 ~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~ 598 (680)
+||+|||+++........ ....|+......++.++|||||||+++||+| |+.||.........+.+
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i--- 235 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI--- 235 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---
Confidence 999999999765322110 1122343344567889999999999999999 89998754432222222
Q ss_pred hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.... ... .+.....++.+++.+||+.+|.+|||+++|.+.|+++...+
T Consensus 236 ~~~~--~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 236 TQGR--VLQ--------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HcCC--cCC--------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 1111 000 01112357899999999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=302.01 Aligned_cols=247 Identities=17% Similarity=0.307 Sum_probs=194.0
Q ss_pred hccccCCCCCCeEEEEEeCC-----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 387 FSNIIDTQSGCTIYKGTLSS-----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~-----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
+.++||+|+||.||+|...+ +..|++|.+.... .......+.+|++++++++|+||+++++++...+. ..
T Consensus 10 ~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-~~ 84 (280)
T cd05043 10 LSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA----SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE-PP 84 (280)
T ss_pred EeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC-CC
Confidence 45899999999999999865 6788988875322 23446678999999999999999999999887532 57
Q ss_pred EEEEEecCCCChhhhhccCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEM------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
++++||+++|+|.+++..... ..+++.+++.++.+++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 999999999999999864321 4689999999999999999999988 9999999999999999999999999
Q ss_pred ccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCC
Q 005734 536 CFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 536 Gla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
|+++.+...... ....|+.......+.++||||||+++||++| |+.||......++..++.... .
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----~ 237 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY----R 237 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC----C
Confidence 999865432111 1122343334456889999999999999999 999997654444433332211 1
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
... ...++.++.+++.+||..+|++|||+.+|++.|+++..
T Consensus 238 ~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 238 LAQ---------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCC---------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 110 11123578999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=299.09 Aligned_cols=245 Identities=17% Similarity=0.271 Sum_probs=192.6
Q ss_pred HHhhhhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 382 TACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 382 ~~~~~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
..+..+.+.||+|+||.||+|..++++.+|+|.+..... ...+|.+|++++++++|+||+++++++.. + ..
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~ 75 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM------SPEAFLAEANLMKQLQHPRLVRLYAVVTQ-E--PI 75 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC------cHHHHHHHHHHHHhcCCcCeeeEEEEEcc-C--Cc
Confidence 334445689999999999999998999999998864331 23468899999999999999999998754 3 46
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++|+||+++|+|.+++....+..+++.++..++.+++.||+|||+. +++||||||+||++++++.++++|||++...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 152 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLI 152 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeec
Confidence 9999999999999999766566799999999999999999999988 9999999999999999999999999999766
Q ss_pred CCCCCc---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 542 LPKSKV---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 542 ~~~~~~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
...... ....|+.......+.++||||||++++|++| |+.||.+.......+........ .
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----~----- 223 (260)
T cd05067 153 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM----P----- 223 (260)
T ss_pred CCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC----C-----
Confidence 522111 1122333334456788999999999999999 99999765433333322211110 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.+...+.++.+++.+|++.+|++||+++++...|+.
T Consensus 224 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 ----RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111223579999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=299.23 Aligned_cols=238 Identities=17% Similarity=0.302 Sum_probs=187.8
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|..+++..+|+|....... ...+|.+|++++++++|+||+++++++...+ ..++|+|
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM------SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR--PIFIVTE 79 (256)
T ss_pred hhhhhccCCCceEEEeEecCCccEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--ceEEEEe
Confidence 4588999999999999988777899998753321 1346889999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++..+. ..++|..+++++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 80 YMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred cCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 999999999997543 3689999999999999999999998 899999999999999999999999999876543211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+......++.++||||||+++||++| |+.||...........+...... . .
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------~---~ 222 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL----------Y---R 222 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC----------C---C
Confidence 1 1122333334567789999999999999999 89998754433332222211110 0 0
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
+...+.++.+++.+||+.+|++||||.|+++.|
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 112346899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=308.27 Aligned_cols=238 Identities=15% Similarity=0.210 Sum_probs=186.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++...... .......+.+|++++.+++||||+++++++.+++ ..++|||
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 98 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL--KMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN--RVYFLLE 98 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh--hhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC--EEEEEEc
Confidence 489999999999999985 6889999998643211 1234567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 99 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 99 FVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred CCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 99999999999643 3688999999999999999999998 999999999999999999999999999987653322
Q ss_pred cc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 VS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 ~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.. ...|+.......+.++|||||||++|||+||+.||.+.......+ ........+.. ...
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~i~~~~~~~p~-----------~~~ 239 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE---KILAGRLKFPN-----------WFD 239 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHH---HHhcCCcCCCC-----------CCC
Confidence 11 122343444456889999999999999999999997654322222 22221111111 112
Q ss_pred HHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRPT-----MNDIIVQ 648 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPt-----m~ev~~~ 648 (680)
.++.+++.+||+.||++||+ +++++..
T Consensus 240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 56789999999999999997 6777643
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=298.88 Aligned_cols=240 Identities=18% Similarity=0.297 Sum_probs=190.1
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|++|.||+|..+++..+|+|.+..... ...+|.+|++++++++|+|++++++++.+ . ..+++||
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~--~~~lv~e 80 (260)
T cd05070 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM------SPESFLEEAQIMKKLRHDKLVQLYAVVSE-E--PIYIVTE 80 (260)
T ss_pred hhheeccccCceEEEEEecCCceeEEEEecCCCC------CHHHHHHHHHHHHhcCCCceEEEEeEECC-C--CcEEEEE
Confidence 4478999999999999988888899998865332 13468999999999999999999998854 3 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.++++......+++.++.+++.+++.||+|||+. +|+||||||+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 99999999999765555789999999999999999999998 899999999999999999999999999977543211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+.......+.++||||||++++||++ |+.||.+....+..+.... . ... ..
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~---~-~~~---------~~ 224 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER---G-YRM---------PC 224 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---C-CCC---------CC
Confidence 1 1122343334557789999999999999999 8999976443333332221 1 000 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
+......+.+++.+|+..+|++|||+.++.+.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 12233678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-35 Score=299.86 Aligned_cols=234 Identities=18% Similarity=0.311 Sum_probs=176.0
Q ss_pred ccCCCCCCeEEEEEeCC-------------------------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC
Q 005734 390 IIDTQSGCTIYKGTLSS-------------------------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~-------------------------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ 444 (680)
.||+|+||.||+|++.. ...|+||++.... .....+|.+|++++++++||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~~~~~~~~l~h~ 76 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-----RDIALAFFETASLMSQVSHI 76 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-----HHHHHHHHHHHHHHhcCCCC
Confidence 68999999999998521 1347777764322 23346788999999999999
Q ss_pred cccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005734 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524 (680)
Q Consensus 445 niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 524 (680)
||++++|+|.+.. ..++||||+++|+|..++... ...+++..+++++.|+++||+|||+. +|+||||||+|||+
T Consensus 77 niv~~~~~~~~~~--~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill 150 (274)
T cd05076 77 HLAFVHGVCVRGS--ENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILL 150 (274)
T ss_pred CeeeEEEEEEeCC--ceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEE
Confidence 9999999999877 679999999999999998643 34689999999999999999999998 99999999999999
Q ss_pred cCCC-------CeEEcccccccccCCCCCc----ccccccCCC-CCCCCCCCCeeehhHHHHHHH-hCCCCCCccccccH
Q 005734 525 TDDY-------AAKVAEICFTTIALPKSKV----SDDIENSVL-PPLADPETNIYSFGILMLEII-SGKLPYCEEKELSI 591 (680)
Q Consensus 525 d~~~-------~~ki~DFGla~~~~~~~~~----~~~~~~~~~-~~~~s~~sDVySfGvvllEll-tG~~p~~~~~~~~~ 591 (680)
++++ .+|++|||++......... ....|+... ...++.++|||||||++||++ +|+.||........
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred eccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 7643 3799999988654322111 112233222 234688899999999999995 69999875443222
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
....... .... .....++.+++.+||+.+|++||+|.+|++.|
T Consensus 231 ~~~~~~~----~~~~-----------~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 231 ERFYEKK----HRLP-----------EPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHhc----cCCC-----------CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2222111 1111 01124688999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=309.33 Aligned_cols=248 Identities=19% Similarity=0.303 Sum_probs=189.3
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCC
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 459 (680)
+.+.||+|+||.||+|... +++.||+|++..... ......+.+|++++.++ +|+||++++++|...+.
T Consensus 11 i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~- 85 (337)
T cd05054 11 LGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT----ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG- 85 (337)
T ss_pred hhcccccCcCceEEeccccccccccccceeeeeeccCCCC----HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC-
Confidence 3589999999999999742 357899998864321 22345678899999999 89999999999876543
Q ss_pred ceEEEEEecCCCChhhhhccCC----------------------------------------------------------
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKE---------------------------------------------------------- 481 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~---------------------------------------------------------- 481 (680)
..++++||+++|+|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 5689999999999999985321
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC----------cccc
Q 005734 482 -MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK----------VSDD 550 (680)
Q Consensus 482 -~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~----------~~~~ 550 (680)
...++|..+.+++.+|+.||+|||+. +|+||||||+||++++++.+||+|||+++.+..... ....
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 12689999999999999999999998 999999999999999999999999999987642211 0112
Q ss_pred cccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHH
Q 005734 551 IENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629 (680)
Q Consensus 551 ~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~ 629 (680)
.|+......+++++|||||||++|||+| |+.||.+...... ....+...... ..+.....++.+++.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~~~l~~ 310 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE---FCRRLKEGTRM---------RAPEYATPEIYSIML 310 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH---HHHHHhccCCC---------CCCccCCHHHHHHHH
Confidence 2444444567889999999999999998 9999975321111 11111111100 011123367899999
Q ss_pred HccccCCCCCCCHHHHHHHHHHhhc
Q 005734 630 ECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 630 ~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
+||+.+|++||++.||+++|+++..
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=302.63 Aligned_cols=245 Identities=18% Similarity=0.310 Sum_probs=190.8
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCC
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 459 (680)
..+.||+|+||.||++... +...+|+|.+..... .....++.+|++++.++ +|+||++++++|..++
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-- 89 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT----EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG-- 89 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC----HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC--
Confidence 3489999999999999864 236789998764321 23345689999999999 7999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK--------------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~--------------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 525 (680)
..+++|||+++|+|.++++.. ....++|..+++++.|++.||+|||+. +|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence 569999999999999998642 235689999999999999999999988 999999999999999
Q ss_pred CCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHH
Q 005734 526 DDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKW 594 (680)
Q Consensus 526 ~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~ 594 (680)
+++.+|++|||+++........ ....|+......++.++|||||||++|||++ |..||.........+.
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 246 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 246 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 9999999999999876432110 1122344444567888999999999999998 9999875432222222
Q ss_pred HHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 595 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.. ..... ..+......+.+++.+||..+|++||||.|+++.|+++.
T Consensus 247 ~~----~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 247 LK----EGYRM---------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HH----cCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 21 11100 011223467889999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=298.08 Aligned_cols=240 Identities=18% Similarity=0.281 Sum_probs=189.0
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+...||+|++|.||++...++..+|+|.+.... .....|.+|++++++++|+|++++++++.. + ..++|||
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~~v~e 80 (260)
T cd05069 10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT------MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-E--PIYIVTE 80 (260)
T ss_pred eeeeecCcCCCeEEEEEEcCCceEEEEEcccCC------ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-C--CcEEEEE
Confidence 347899999999999998877789999875432 123568899999999999999999998854 3 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++......++|..+..++.+++.||+|||+. +++||||||+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 99999999999765555689999999999999999999988 899999999999999999999999999976542211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+.......+.++|||||||++|||+| |+.||.+........+....... ..
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------------~~ 224 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRM-------------PC 224 (260)
T ss_pred cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------CC
Confidence 1 1122333334556888999999999999999 89999765433333332211100 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
+...+..+.+++.+||+.+|++||++++|++.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 12234678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=294.44 Aligned_cols=239 Identities=18% Similarity=0.330 Sum_probs=188.1
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
++||+|+||.||+|...++..+|+|....... ......|.+|++++++++||||++++++|...+ ..++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP----QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ--PIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC----HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC--ccEEEEECC
Confidence 47899999999999988899999998764332 223456899999999999999999999998877 579999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc-
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV- 547 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~- 547 (680)
++|+|.+++.... ..++|..+++++.+++.||.|||.. +++||||||+||++++++.+|++|||++.........
T Consensus 75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 150 (250)
T cd05085 75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS 150 (250)
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccccc
Confidence 9999999986443 4689999999999999999999988 9999999999999999999999999998754322111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
....|+.......+.++||||||+++||+++ |..||...........+.. . ... ..+.
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~---~-~~~---------~~~~ 217 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK---G-YRM---------SCPQ 217 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc---C-CCC---------CCCC
Confidence 0122333334556788999999999999999 9999976543222222211 1 100 0111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
..+..+.+++.+|++.+|++||++.|++++|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 23468899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=298.13 Aligned_cols=243 Identities=20% Similarity=0.397 Sum_probs=185.2
Q ss_pred cccCCCCCCeEEEEEeC-CCC--EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~--~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 464 (680)
++||+|+||.||+|... +|. .+++|.++... .......+.+|++++.++ +||||++++++|...+ ..++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~lv 74 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYLA 74 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC----CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC--CceEE
Confidence 47899999999999985 444 45777665322 123455789999999999 7999999999998877 57999
Q ss_pred EEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCe
Q 005734 465 FEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAA 530 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 530 (680)
|||+++|+|.++++... ...+++.++.+++.+++.||+|||+. +++||||||+||++++++.+
T Consensus 75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~ 151 (270)
T cd05047 75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 151 (270)
T ss_pred EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeE
Confidence 99999999999986432 23589999999999999999999987 99999999999999999999
Q ss_pred EEcccccccccCCCC--C-----cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 531 KVAEICFTTIALPKS--K-----VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 531 ki~DFGla~~~~~~~--~-----~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|++|||+++...... . .....|++.....++.++|||||||+++||+| |+.||.+....+..+.+ ...
T Consensus 152 kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~---~~~- 227 (270)
T cd05047 152 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL---PQG- 227 (270)
T ss_pred EECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH---hCC-
Confidence 999999986432110 0 01122343334567889999999999999997 99999754322222221 111
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.... .+.....++.+++.+||+.+|.+||++.++++.|+++.
T Consensus 228 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 228 YRLE---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCC---------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1100 11122357889999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=302.43 Aligned_cols=246 Identities=16% Similarity=0.296 Sum_probs=187.1
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||+||++.. .++..||||++.... ....+.|.+|++++++++||||+++++++...+....+
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 37899999999999985 357889999876433 23456789999999999999999999998654433578
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+|+||+++|+|.+++.... ..++|..+..++.+++.||+|||.. +|+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999996432 4689999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCc-----c------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHH-------------HHHHH
Q 005734 543 PKSKV-----S------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK-------------WAADY 598 (680)
Q Consensus 543 ~~~~~-----~------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~-------------~~~~~ 598 (680)
..... . ...|+......++.++|||||||+++||++|..|+.... ....+ .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP-AEFMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc-hhhhhhcccccccccchHHHHHH
Confidence 32111 0 112333334456788999999999999999887754321 11000 00011
Q ss_pred hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
...... .......+.++.+++.+||+.+|++||||.||+++|+.+
T Consensus 239 ~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 239 LKNNGR---------LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HhcCCc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 111000 011122346799999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=304.05 Aligned_cols=238 Identities=17% Similarity=0.204 Sum_probs=186.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|+.||||++...... .......+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 81 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI--RLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR--FLYMLME 81 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh--hhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC--eEEEEEe
Confidence 378999999999999975 6889999998643211 1234557889999999999999999999988776 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 82 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~ 156 (291)
T cd05612 82 YVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW 156 (291)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCCcc
Confidence 99999999999643 3689999999999999999999998 999999999999999999999999999987653221
Q ss_pred cc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 VS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 ~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.. ...|+.......+.++|||||||++|||+||+.||.......+.+. .......+ +....
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~-----------~~~~~ 222 (291)
T cd05612 157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEK---ILAGKLEF-----------PRHLD 222 (291)
T ss_pred cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhCCcCC-----------CccCC
Confidence 11 1223433344568889999999999999999999976543332222 22211111 11112
Q ss_pred HHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRPT-----MNDIIVQ 648 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPt-----m~ev~~~ 648 (680)
..+.+++.+|++.||.+||+ ++|+++.
T Consensus 223 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 223 LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 57889999999999999995 7777654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=303.85 Aligned_cols=247 Identities=20% Similarity=0.407 Sum_probs=187.2
Q ss_pred hhccccCCCCCCeEEEEEeC-CCCE--EEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCce
Q 005734 386 DFSNIIDTQSGCTIYKGTLS-SGVE--IAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~-~g~~--vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.+.||+|+||.||+|... +|.. +++|...... ......+|.+|++++.++ +|+||+++++++..++ ..
T Consensus 10 ~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~--~~ 83 (303)
T cd05088 10 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YL 83 (303)
T ss_pred eeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC----CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC--Cc
Confidence 34589999999999999974 4554 4555543221 133456789999999999 8999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD 527 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 527 (680)
++|+||+++|+|.++++... ...+++.+++.++.|++.||+|||+. +++||||||+|||++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 99999999999999996432 23589999999999999999999988 99999999999999999
Q ss_pred CCeEEcccccccccCCCCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHh
Q 005734 528 YAAKVAEICFTTIALPKSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYL 599 (680)
Q Consensus 528 ~~~ki~DFGla~~~~~~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~ 599 (680)
+.+||+|||+++....... .....|+.......++++|||||||+++||+| |..||......+..+.+.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~--- 237 (303)
T cd05088 161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP--- 237 (303)
T ss_pred CcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh---
Confidence 9999999999864321100 01122333333456889999999999999998 999997544332222221
Q ss_pred cCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 600 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.. .... .+......+.+++.+||+.+|++||++++++++|+++..
T Consensus 238 ~~-~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 238 QG-YRLE---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred cC-CcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 0000 011123568899999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=301.91 Aligned_cols=244 Identities=18% Similarity=0.315 Sum_probs=189.2
Q ss_pred hhccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 386 DFSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
.+.+.||+|+||.||+|... ++..||||++..... ....+.|.+|+.++.+++||||+++++++.+..
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-- 81 (283)
T cd05091 8 RFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE----GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ-- 81 (283)
T ss_pred HHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC----HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC--
Confidence 34478999999999999863 357899998864432 233467899999999999999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK--------------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~--------------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 525 (680)
..++++||+++++|.+++... ....+++..+++++.|++.||+|||+. +|+||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~ 158 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVF 158 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEec
Confidence 579999999999999998521 123589999999999999999999988 999999999999999
Q ss_pred CCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHH
Q 005734 526 DDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKW 594 (680)
Q Consensus 526 ~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~ 594 (680)
+++.+||+|||+++........ ....|+......++.++||||||+++|||+| |..||.+....++.+.
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9999999999998865422111 1122333334567889999999999999998 8888876443333222
Q ss_pred HHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 595 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
...... . ..+..++..+.+++.+||+.+|++||++.+|+..|+.
T Consensus 239 ---i~~~~~--~--------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 239 ---IRNRQV--L--------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ---HHcCCc--C--------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 222111 0 1122344678999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=305.24 Aligned_cols=237 Identities=14% Similarity=0.165 Sum_probs=184.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||.||++... +|+.||||++..... ........+.+|++++++++||||+++.+++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~Ey 76 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI--IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD--RLCFVMEY 76 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--EEEEEEeC
Confidence 36899999999999864 689999999864321 11334567889999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 77 ~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 151 (328)
T cd05593 77 VNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT 151 (328)
T ss_pred CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc
Confidence 9999999988643 3689999999999999999999998 9999999999999999999999999998764321111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+......++.++|||||||++|||+||+.||...... +...........+ +..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~---~~~~~~~~~~~~~-----------p~~ 217 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILMEDIKF-----------PRT 217 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH---HHHHHhccCCccC-----------CCC
Confidence 112234333445688999999999999999999999754322 2222222211111 112
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
...++.+++.+|++.||++|| ++.++++.
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 235788999999999999997 88888754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=301.23 Aligned_cols=249 Identities=18% Similarity=0.306 Sum_probs=186.0
Q ss_pred ccccCCCCCCeEEEEEeCC-------------C--CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeE
Q 005734 388 SNIIDTQSGCTIYKGTLSS-------------G--VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~-------------g--~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~ 452 (680)
.+.||+|+||.||++...+ + ..||||.+..... ......|.+|++++++++|+|+++++++
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT----KTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC----HHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 4789999999999987632 2 2488888764321 2345679999999999999999999999
Q ss_pred EecCCCCceEEEEEecCCCChhhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005734 453 CEDDEPFNRMMVFEYAPNGTVFEHLHIKE----------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522 (680)
Q Consensus 453 ~~~~~~~~~~lV~ey~~~GsL~~~l~~~~----------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NI 522 (680)
+...+ ..++||||+++++|.+++.... ...++|..+++++.+++.||+|||+. +++||||||+||
T Consensus 86 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 86 CVSDD--PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred EcCCC--ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 98877 6799999999999999985431 12478999999999999999999998 999999999999
Q ss_pred eecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh--CCCCCCcccccc
Q 005734 523 YLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS--GKLPYCEEKELS 590 (680)
Q Consensus 523 Lld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt--G~~p~~~~~~~~ 590 (680)
++++++.+||+|||+++........ ....|+......++.++|||||||+++||+| |..||.......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 9999999999999999765422111 1112333334456889999999999999998 567776543333
Q ss_pred HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 591 IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.................. ..+...+..+.+++.+||+.+|++||+|.+|++.|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 241 VIENTGEFFRNQGRQIYL------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHhhhhccccccC------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 332222222111100000 0111233689999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=293.82 Aligned_cols=240 Identities=15% Similarity=0.259 Sum_probs=191.1
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||+|++|.||+|+.. +|..|++|.+...... .....++.+|++++++++||||+++++++.+.+ ..++||
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 78 (256)
T cd08529 4 ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN---RREREEAIDEARVLAKLDSSYIIRYYESFLDKG--KLNIVM 78 (256)
T ss_pred EeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC---HHHHHHHHHHHHHHHhcCCCCeehheeeeccCC--EEEEEE
Confidence 3478999999999999975 6889999988653322 344567999999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++++|.++++......+++..+.+++.+++.||+|||+. +++||||||+||++++++.++|+|||+++......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999999999866556799999999999999999999988 99999999999999999999999999988765322
Q ss_pred Ccc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...|+.......++++||||||++++||+||+.||.......... ...... .. ...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~--~~--------~~~ 222 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALIL---KIIRGV--FP--------PVS 222 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHcCC--CC--------CCc
Confidence 111 122444444566889999999999999999999997654322222 222110 10 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
......+.+++.+||+.+|++||+|.++++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 123367899999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=300.52 Aligned_cols=242 Identities=14% Similarity=0.283 Sum_probs=186.1
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|... ++..||||++..... .....+|.+|+.++++++|+||+++++++.++. ..
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~----~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~--~~ 84 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PT 84 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--Ce
Confidence 489999999999999753 356799998753221 123457899999999999999999999998777 67
Q ss_pred EEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKE--------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~--------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~ 533 (680)
++||||+++|+|.+++.... ...++|..+++++.+++.||+|||+. +++||||||+||++++++.++|+
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEEC
Confidence 99999999999999986422 23468999999999999999999997 99999999999999999999999
Q ss_pred ccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++........ ....|+.......+.++|||||||++|||+| |+.||.+.......+.+. ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~---~~- 237 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM---EG- 237 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---cC-
Confidence 99998765321110 1122333334457889999999999999999 788987654333322221 11
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
. .. ..+...+..+.+++.+|++.+|++||++.|+++.|++
T Consensus 238 ~-~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 238 G-LL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred C-cC--------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1 00 1112234678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=294.84 Aligned_cols=240 Identities=18% Similarity=0.303 Sum_probs=188.5
Q ss_pred cccCCCCCCeEEEEEeC--C--CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS--S--GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~--~--g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.||+|+||.||+|+.. + +..+|+|........ ...+++.+|++++++++|+|||++++++... ..++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA----AGKKEFLREASVMAQLDHPCIVRLIGVCKGE---PLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch----HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC---ceEEE
Confidence 46999999999999853 2 267999987654321 3456799999999999999999999988643 46899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.+++.... .+++..+++++.+++.||+|||.. +++||||||+||++++++.+||+|||+++.....
T Consensus 74 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 74 MELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAG 148 (257)
T ss_pred EEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecC
Confidence 99999999999996543 689999999999999999999988 8999999999999999999999999999866432
Q ss_pred CCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 545 SKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 545 ~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
... ....|+......++.++||||||+++||++| |+.||.........+++... ....
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~----~~~~------ 218 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG----ERLP------ 218 (257)
T ss_pred CcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC----CcCC------
Confidence 211 1122343344557889999999999999998 99999765444444433221 1100
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.+...+..+.+++.+||..+|++||++.++++.|+++.
T Consensus 219 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 219 ---RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 11123367889999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=297.31 Aligned_cols=244 Identities=16% Similarity=0.319 Sum_probs=191.5
Q ss_pred hhccccCCCCCCeEEEEEeC-CC---CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 386 DFSNIIDTQSGCTIYKGTLS-SG---VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~-~g---~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.+.||+|+||.||+|... +| ..||||++.... ......+|..|++++++++||||+++++++.+++ ..
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~ 80 (269)
T cd05065 7 KIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR--PV 80 (269)
T ss_pred EEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC--ce
Confidence 44589999999999999974 33 359999876432 1334568999999999999999999999998777 56
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||++++++.+|++|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 99999999999999997543 4689999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCc-------------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 542 LPKSKV-------------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 542 ~~~~~~-------------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
...... ....|+......++.++|||||||++||+++ |+.||......+..+++..... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~----~~- 231 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR----LP- 231 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc----CC-
Confidence 422110 0112333334556888999999999999987 9999976543444443321111 00
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.+.+.+..+.+++.+||+.+|++||+|++|+..|+++
T Consensus 232 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 232 --------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0122346788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=295.03 Aligned_cols=242 Identities=19% Similarity=0.325 Sum_probs=193.0
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.+.||.|++|.||+|... |+.||||.+.... ...+++.+|+.++++++|+||+++++++.+.. ..++||
T Consensus 9 ~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~ 79 (256)
T cd05039 9 KLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDS------TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGN--PLYIVT 79 (256)
T ss_pred cceeeeecCCCceEEEEEec-CcEEEEEEeccch------hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCC--CeEEEE
Confidence 34589999999999999875 7889999886443 13567899999999999999999999998766 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++++|.+++.......++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 999999999999765555799999999999999999999998 99999999999999999999999999998764222
Q ss_pred Ccc-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 546 KVS-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 546 ~~~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
... ...|+......++.++||||||++++|+++ |+.||......++...+...... ..+..
T Consensus 157 ~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~ 223 (256)
T cd05039 157 DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM-------------EAPEG 223 (256)
T ss_pred ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC-------------CCccC
Confidence 111 122444444567788999999999999998 99998754433332222211000 01112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.+.++.+++.+|+..+|++||+++|++++|+.+
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 236788999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=307.61 Aligned_cols=246 Identities=13% Similarity=0.124 Sum_probs=189.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++...... .....+.+..|++++.+++||||+++++++.+++ ..++|||
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e 81 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF--KLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE--YLYLAME 81 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh--hhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC--EEEEEEe
Confidence 378999999999999985 5889999998654211 1234567889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~ 156 (333)
T cd05600 82 YVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYAN 156 (333)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCcccccccC
Confidence 99999999999643 3689999999999999999999998 999999999999999999999999999986543211
Q ss_pred c-----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 V-----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 ~-----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
. ....|+......++.++|||||||++|||+||+.||......+....+...... .. .+..........
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~---~~---~~~~~~~~~~~s 230 (333)
T cd05600 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET---LQ---RPVYDDPRFNLS 230 (333)
T ss_pred CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc---cc---CCCCCccccccC
Confidence 1 122344444456788999999999999999999999765433332222211100 00 011100011234
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.++.+++.+|+..+|++||+++++++.
T Consensus 231 ~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 231 DEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 678899999999999999999999865
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=305.05 Aligned_cols=236 Identities=14% Similarity=0.166 Sum_probs=183.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||.||++... +|..||+|++...... .+.....+.+|++++++++||||+++++++...+ ..++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~E~ 76 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII--AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEY 76 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--EEEEEEeC
Confidence 36899999999999864 7899999998653211 1234556788999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|..++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 151 (323)
T cd05595 77 ANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 151 (323)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc
Confidence 9999999888643 3689999999999999999999998 999999999999999999999999999876432111
Q ss_pred -------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 -------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 -------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.....|+......++.++|||||||++|||+||+.||......... .........+ +..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~---~~~~~~~~~~-----------p~~ 217 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF---ELILMEEIRF-----------PRT 217 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH---HHHhcCCCCC-----------CCC
Confidence 1112344444456688999999999999999999999754322222 2222111111 112
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
...++.+++.+|++.||++|| ++.++++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 235788999999999999998 7888775
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=293.69 Aligned_cols=249 Identities=16% Similarity=0.245 Sum_probs=192.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. ++..||||.+...... .......|.+|++++++++||||+++++++.+.+ ..++|+|
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e 82 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM--DAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN--ELNIVLE 82 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC--CHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC--eEEEEEE
Confidence 478999999999999974 7899999987643221 2344567899999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ....++....++++.++++||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 99999999988532 234688999999999999999999998 9999999999999999999999999998876432
Q ss_pred CCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... ....|+.......+.++||||||+++|||+||+.||.... .+...+....... . . +.. .
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~-~~~~~~~~~~~~~-~-~-----~~~--~ 229 (267)
T cd08228 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLFSLCQKIEQC-D-Y-----PPL--P 229 (267)
T ss_pred hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc-ccHHHHHHHHhcC-C-C-----CCC--C
Confidence 111 1112343333456788999999999999999999986543 2233333222111 1 0 000 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.......+.+++.+||+.+|++||++.+|++.++++.
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1233467899999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=297.00 Aligned_cols=242 Identities=15% Similarity=0.267 Sum_probs=189.5
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.+.||+|+||.||+|+..++..||+|++..... ..++|.+|++++++++|+||+++++++.+. ..++||
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---~~~lv~ 79 (262)
T cd05071 9 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVT 79 (262)
T ss_pred eEeeecCCCCCCcEEEEEecCCceEEEEecccCcc------CHHHHHHHHHHHHhCCCCCcceEEEEECCC---CcEEEE
Confidence 34578999999999999987777899998864321 134689999999999999999999987543 458999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++.......++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 999999999999765455689999999999999999999998 99999999999999999999999999997654322
Q ss_pred Ccc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 546 KVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 546 ~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
... ...|+......++.++||||||+++|||+| |+.||........... .... ... .
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~---~~~~-~~~---------~ 223 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ---VERG-YRM---------P 223 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHH---HhcC-CCC---------C
Confidence 111 122343444567889999999999999999 8888875443222221 1111 000 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
...+.+..+.+++.+|++.+|++||++.++++.|++.
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1123346789999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=301.01 Aligned_cols=248 Identities=20% Similarity=0.386 Sum_probs=189.5
Q ss_pred hccccCCCCCCeEEEEEeC-CCC--EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~--~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 462 (680)
+.+.||+|+||.||+|... +|. .+++|.++.... ....+.|.+|++++.++ +||||+++++++...+ ..+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 79 (297)
T cd05089 6 FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS----ENDHRDFAGELEVLCKLGHHPNIINLLGACENRG--YLY 79 (297)
T ss_pred eeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC----HHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC--cce
Confidence 3479999999999999975 343 467777653221 22346789999999999 7999999999998776 679
Q ss_pred EEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 005734 463 MVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 528 (680)
+|+||+++|+|.++++... ...+++..+.+|+.|++.||+|||+. +|+||||||+|||+++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 9999999999999996432 13589999999999999999999988 999999999999999999
Q ss_pred CeEEcccccccccCCCC--Cc-----ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhc
Q 005734 529 AAKVAEICFTTIALPKS--KV-----SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLN 600 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~--~~-----~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~ 600 (680)
.+||+|||++....... .. ....|+......++.++|||||||++|||+| |+.||......+... ....
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~---~~~~ 233 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE---KLPQ 233 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH---HHhc
Confidence 99999999986532110 00 1122444344456889999999999999998 999997644333222 2211
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
. .. . ..+......+.+++.+||+.+|.+||++++++++|+++....
T Consensus 234 ~-~~------~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 234 G-YR------M---EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred C-CC------C---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1 00 0 011122357889999999999999999999999999987655
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=304.50 Aligned_cols=250 Identities=12% Similarity=0.163 Sum_probs=186.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+++.. +|..+|+|.+..... ......+.+|++++++++||||+++++++..++ ..++||||
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 84 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEH 84 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccC----HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEeec
Confidence 78999999999999975 688899998865421 234567999999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++..+.+++.+++.||+|||+.. +|+||||||+|||+++++.+||+|||+++........
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 160 (331)
T cd06649 85 MDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 160 (331)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccccc
Confidence 9999999999643 36899999999999999999999752 6999999999999999999999999998765422111
Q ss_pred ------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-CCccc-------------
Q 005734 548 ------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-RNFSC------------- 607 (680)
Q Consensus 548 ------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~------------- 607 (680)
....|+......++.++|||||||++|||+||+.||......++...+....... .....
T Consensus 161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
T cd06649 161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPV 240 (331)
T ss_pred cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccc
Confidence 1122444444567889999999999999999999997543222222211110000 00000
Q ss_pred -------------------ccCcccCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 608 -------------------MIDPSLKSF-KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 608 -------------------~~d~~l~~~-~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+........ ......++.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000 01234578999999999999999999999875
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=298.49 Aligned_cols=242 Identities=13% Similarity=0.129 Sum_probs=184.4
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
||+|+||.||++... +|+.+|+|++.....+. ....+.+..|++++++++||||+++.+++..+. ..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~--~~~lv~e~~~ 76 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK--KSGEKMALLEKEILEKVNSPFIVNLAYAFESKT--HLCLVMSLMN 76 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc--chhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC--eEEEEEecCC
Confidence 699999999999874 68999999886433211 122345667999999999999999999998776 6799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC---
Q 005734 470 NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK--- 546 (680)
Q Consensus 470 ~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~--- 546 (680)
+|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 77 g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 153 (277)
T cd05607 77 GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQ 153 (277)
T ss_pred CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeec
Confidence 99999998765556799999999999999999999998 999999999999999999999999999876543211
Q ss_pred ----cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 ----VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 ----~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.....|+......++.++||||+||++|||++|+.||..... ................. ......
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 223 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF----------EHQNFT 223 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc----------ccccCC
Confidence 111223433344578899999999999999999999965321 11122222222111000 001223
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
.++.+++.+|++.+|++||+++|+++.+
T Consensus 224 ~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 224 EESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 5789999999999999999998776443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=299.42 Aligned_cols=242 Identities=14% Similarity=0.159 Sum_probs=188.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||+||++... +++.||||++....... ......+.+|++++++++|+||+++++++..++ ..++||||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 81 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTL 81 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh--hhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--eEEEEEec
Confidence 78999999999999974 78899999886533221 223456788999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 158 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI 158 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc
Confidence 9999999998755445799999999999999999999998 9999999999999999999999999999875432211
Q ss_pred -------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 548 -------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 548 -------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
....|+......++.++|||||||++|||++|+.||.+.......+.+...+.... ...+...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 228 (285)
T cd05605 159 RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ----------EEYSEKF 228 (285)
T ss_pred ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc----------cccCccc
Confidence 11224444445678889999999999999999999976443222222222221100 0112223
Q ss_pred HHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
...+.+++.+||+.||++|| +++++++
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 229 SEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred CHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 46788999999999999999 7778765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=306.89 Aligned_cols=236 Identities=15% Similarity=0.229 Sum_probs=180.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++..... ......+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 152 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE----DTVRRQICREIEILRDVNHPNVVKCHDMFDHNG--EIQVLLE 152 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc----HHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC--eEEEEEe
Confidence 368999999999999974 789999998854321 234567899999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+.. ..++.....++.+|+.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 153 ~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 153 FMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred cCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 99999987543 356778889999999999999998 999999999999999999999999999987542211
Q ss_pred ---cccccccCCCCC----------CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 547 ---VSDDIENSVLPP----------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 547 ---~~~~~~~~~~~~----------~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
.......|..++ +.+.++|||||||++|||++|+.||......+............. +
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------~-- 294 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP-------P-- 294 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-------C--
Confidence 011111222222 334689999999999999999999974332333222222111100 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
........++.+++.+||+.+|++||++.|+++.
T Consensus 295 -~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 -EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0112233678999999999999999999999975
|
|
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=298.20 Aligned_cols=241 Identities=18% Similarity=0.301 Sum_probs=186.1
Q ss_pred cccCCCCCCeEEEEEeCC------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTLSS------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
+.||+|++|.||+|...+ +..|++|....... .....+|.+|+.++++++|+||+++++++.+.+ ..+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~ 85 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS----EQDESDFLMEALIMSKFNHQNIVRLIGVSFERL--PRF 85 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CcE
Confidence 899999999999999853 46788887653321 233567999999999999999999999998877 569
Q ss_pred EEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeEEcc
Q 005734 463 MVFEYAPNGTVFEHLHIKE-----MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAKVAE 534 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~-----~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~ki~D 534 (680)
+||||+++|+|.++++... ...++|.++++++.+|+.||+|||+. +++||||||+||+++.++ .+|++|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999996442 23689999999999999999999998 899999999999998654 599999
Q ss_pred cccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCC
Q 005734 535 ICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603 (680)
Q Consensus 535 FGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~ 603 (680)
||+++........ ....|+......+++++|||||||++|||+| |+.||.......+.+.+. .. .
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~---~~-~ 238 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT---GG-G 238 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH---cC-C
Confidence 9999876322110 1122344344567899999999999999997 999997644333322221 11 1
Q ss_pred CcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 604 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.. ..+...+.++.+++.+|++.+|++||++.+|++.|++
T Consensus 239 ~~---------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 239 RL---------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred cC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 00 0112223678899999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=294.13 Aligned_cols=243 Identities=17% Similarity=0.336 Sum_probs=190.2
Q ss_pred hccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 387 FSNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
+.+.||+|+||.||+|... ++..+|+|.+..... ....+.|..|+.++.+++||||+++++++..++ ..+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 81 (267)
T cd05066 8 IEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT----EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK--PVM 81 (267)
T ss_pred eeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--ccE
Confidence 4589999999999999863 234688888754321 234568999999999999999999999998777 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++.++++|+.+++.||+|||+. +++||||||+||+++.++.++++|||+++...
T Consensus 82 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999997543 4689999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ....|+......++.++||||||++++|+++ |+.||.+....+....+..... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~----~~---- 229 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR----LP---- 229 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc----CC----
Confidence 32110 0112344444567889999999999999887 9999976443333333221111 00
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.....+..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 230 -----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 230 -----APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0112235788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=297.25 Aligned_cols=245 Identities=13% Similarity=0.234 Sum_probs=191.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCC----EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGV----EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~----~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||+||+|+. .+|. .||+|++..... ....+++.+|+.++.+++|+||++++++|... ..+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~ 84 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS----PKANKEILDEAYVMAGVGSPYVCRLLGICLTS---TVQ 84 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC----HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC---CcE
Confidence 38999999999999985 4555 378888754332 33456789999999999999999999999764 357
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+++||+++|+|.++++... ..+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999997543 4689999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 543 PKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 543 ~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ....|+......++.++||||||+++|||+| |+.||.......+..++...... .
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----~----- 231 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL----P----- 231 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC----C-----
Confidence 22111 1112333334456888999999999999998 99999765434444433321111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.+.....++.+++.+||+.||++||++.++++.|+++...+
T Consensus 232 ----~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 232 ----QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 01122357889999999999999999999999999886555
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=305.51 Aligned_cols=249 Identities=18% Similarity=0.302 Sum_probs=188.1
Q ss_pred hhccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC
Q 005734 386 DFSNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 458 (680)
.+.+.||+|+||.||+|.. .+++.||||++..... ......+.+|++++.++ +|+||++++++|...+.
T Consensus 10 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 10 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred cccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC----hHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 3458999999999999973 3578899999864331 22345788999999999 68999999999876543
Q ss_pred CceEEEEEecCCCChhhhhccCC---------------------------------------------------------
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKE--------------------------------------------------------- 481 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~--------------------------------------------------------- 481 (680)
..++|+||+++|+|.++++...
T Consensus 86 -~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 86 -PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred -ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 4689999999999999986421
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc------
Q 005734 482 --------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV------ 547 (680)
Q Consensus 482 --------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~------ 547 (680)
...++|.++.+++.++++||+|||+. +|+||||||+||++++++++||+|||+++........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 12478999999999999999999998 9999999999999999999999999999765322110
Q ss_pred ----ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 548 ----SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 548 ----~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
....|+......++.++||||||+++|||++ |..||....... ............. .+ .....
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~~~~~~---~~------~~~~~ 309 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EFCRRLKEGTRMR---AP------DYTTP 309 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH---HHHHHHhccCCCC---CC------CCCCH
Confidence 1122333334557889999999999999997 999986532111 1111111111100 01 11124
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 623 AICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
++.+++.+||+.+|++||++.||++.|+.+..
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 68899999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=292.75 Aligned_cols=240 Identities=18% Similarity=0.280 Sum_probs=188.0
Q ss_pred cccCCCCCCeEEEEEeCC--C--CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLSS--G--VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--g--~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.||+|++|.||+|.+.+ + ..||||.+...... ...++|.+|++++++++|+||+++++++.+ . ..++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~--~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS----DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H--PLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH----HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--eEEEE
Confidence 468999999999999743 3 36899988654421 456789999999999999999999999987 4 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||+++|+|.+++.......++|.....++.|++.||+|||.. +++||||||+||+++.++.+||+|||+++.....
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150 (257)
T ss_pred EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccc
Confidence 9999999999999765435789999999999999999999998 9999999999999999999999999999876532
Q ss_pred CCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 545 SKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 545 ~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
... ....|++.....++.++||||||++++||+| |+.||......+..+.+.. ......
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~---~~~~~~------ 221 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK---EGERLE------ 221 (257)
T ss_pred ccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh---cCCcCC------
Confidence 111 0112333333456888999999999999999 9999975443333333222 111000
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
.+...+..+.+++.+|++.+|++||++.+|++.|.
T Consensus 222 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 ---RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ---CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11123467899999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=311.72 Aligned_cols=254 Identities=18% Similarity=0.313 Sum_probs=191.2
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceee
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIG 451 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g 451 (680)
++....-...+.||+|+||.||+|++. .+..||||++..... ......+.+|++++.++. |||||+++|
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR----SSEKQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC----hhHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 333333344589999999999999863 346799999865432 122346889999999997 999999999
Q ss_pred EEecCCCCceEEEEEecCCCChhhhhccCC--------------------------------------------------
Q 005734 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKE-------------------------------------------------- 481 (680)
Q Consensus 452 ~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~-------------------------------------------------- 481 (680)
+|...+ ..++|+||+++|+|.++++...
T Consensus 109 ~~~~~~--~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 109 ACTKGG--PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred EEccCC--CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 998877 5799999999999999996421
Q ss_pred ----------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 005734 482 ----------------------------------------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515 (680)
Q Consensus 482 ----------------------------------------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHr 515 (680)
...++|...++|+.+++.||+|||+. +|+||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHr 263 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHR 263 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcc
Confidence 12478889999999999999999987 99999
Q ss_pred CCCCCCeeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCC
Q 005734 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYC 584 (680)
Q Consensus 516 DlKp~NILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~ 584 (680)
||||+|||+++++.+||+|||+++........ ....++......+++++|||||||++|||++ |+.||.
T Consensus 264 dlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 264 DLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred cCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999865321110 0112333333456888999999999999998 899986
Q ss_pred ccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 585 EEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
....... ....+....... .+.....++.+++.+||..+|++||+|+||++.|+++.
T Consensus 344 ~~~~~~~---~~~~~~~~~~~~---------~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 344 ELPMNEQ---FYNAIKRGYRMA---------KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCchHH---HHHHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 5432221 111111111110 11122367899999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=301.04 Aligned_cols=250 Identities=17% Similarity=0.305 Sum_probs=192.4
Q ss_pred hhccccCCCCCCeEEEEEe--------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecC
Q 005734 386 DFSNIIDTQSGCTIYKGTL--------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDD 456 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~--------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 456 (680)
.+.+.||+|+||.||+++. .++..||+|...... .....+++.+|+++++++ +|+||+++++++...
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 18 TLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred eecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc----chHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 3458999999999999974 134578888875322 123456789999999999 899999999999887
Q ss_pred CCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NI 522 (680)
. ..++||||+++|+|.+++.... ...++|.+++.++.|++.||+|||+. +|+||||||+||
T Consensus 94 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 94 G--PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred C--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 7 6799999999999999997532 23589999999999999999999998 999999999999
Q ss_pred eecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccH
Q 005734 523 YLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSI 591 (680)
Q Consensus 523 Lld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~ 591 (680)
++++++.+||+|||+++........ ....|+......++.++||||||+++||++| |..||.......+
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 9999999999999999876421111 1122333334456889999999999999999 7888865432222
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
.+ ..... .... .+..+...+.+++.+||+.+|++||+|.||++.|+++.....
T Consensus 249 ~~---~~~~~-~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~ 301 (304)
T cd05101 249 FK---LLKEG-HRMD---------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT 301 (304)
T ss_pred HH---HHHcC-CcCC---------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence 22 22111 1110 112234678899999999999999999999999999877654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=297.60 Aligned_cols=240 Identities=18% Similarity=0.304 Sum_probs=186.2
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
...||+|+||.||++... ++..+++|...... ......|.+|++++++++|+||+++++++.+.. ..
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 82 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----ESARQDFQREAELLTVLQHQHIVRFYGVCTEGR--PL 82 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-----HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC--ce
Confidence 479999999999999742 45678888765432 234567999999999999999999999998877 56
Q ss_pred EEEEEecCCCChhhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKEM-------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~-------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 528 (680)
++|+||+++|+|.++++.... ..+++..++.++.|++.||+|||+. +++||||||+||++++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCC
Confidence 999999999999999864321 3589999999999999999999988 999999999999999999
Q ss_pred CeEEcccccccccCCCCC----------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHH
Q 005734 529 AAKVAEICFTTIALPKSK----------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAAD 597 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~~----------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~ 597 (680)
.+||+|||+++....... .....|+......++.++|||||||++|||+| |+.||......+.....
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~-- 237 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI-- 237 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH--
Confidence 999999999876532211 01122343344567889999999999999999 99998654433222222
Q ss_pred HhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 598 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
... .... .+...+..+.+++.+||+.||++||++.||.+.|+
T Consensus 238 -~~~-~~~~---------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 -TQG-RELE---------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred -HcC-ccCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111 1000 01122357889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=298.45 Aligned_cols=253 Identities=14% Similarity=0.198 Sum_probs=182.0
Q ss_pred ccccCCCCCCeEEEEEeC--CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecC---CCC
Q 005734 388 SNIIDTQSGCTIYKGTLS--SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDD---EPF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~---~~~ 459 (680)
.+.||+|+||.||+|+.. +|..||||++....... .....+.+|+++++++ +||||++++++|... ...
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~ 82 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE---GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 82 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC---CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence 378999999999999863 46889999886543221 1223456677766655 699999999998632 122
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
..++|+||++ |+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 83 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 83 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred cEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 5789999996 6999999765556789999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--Ccc----
Q 005734 540 IALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFS---- 606 (680)
Q Consensus 540 ~~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~---- 606 (680)
......... ...|+......++.++|||||||++|||++|+.||.+..+.+....+......+. ...
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhc
Confidence 754321111 1223333344578899999999999999999999986554443333322221110 000
Q ss_pred ---cccCcccC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 ---CMIDPSLK----SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ---~~~d~~l~----~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+.+.-. .........+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 239 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred ccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000000 001122356789999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=293.66 Aligned_cols=241 Identities=16% Similarity=0.276 Sum_probs=190.8
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.+.||+|+||.||++...++..+++|.+.... .....|.+|++++++++|+||+++.+++.+ . ..+++|
T Consensus 9 ~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--~~~~v~ 79 (260)
T cd05073 9 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS------MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIIT 79 (260)
T ss_pred eEEeEecCccceEEEEEEecCCccEEEEecCCCh------hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C--CeEEEE
Confidence 3458999999999999998888889999875421 234578999999999999999999999877 4 568999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++.......++|..++.++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 999999999999765556789999999999999999999987 99999999999999999999999999987654221
Q ss_pred Cc---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 546 KV---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 546 ~~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.. ....|+.......+.++|||||||+++|++| |+.||..........++..... . +
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~----~-----~---- 223 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR----M-----P---- 223 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC----C-----C----
Confidence 11 1122333334556888999999999999999 9999976543333333221110 0 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 224 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 011233678899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=305.27 Aligned_cols=239 Identities=17% Similarity=0.201 Sum_probs=184.8
Q ss_pred hccccCCCCCCeEEEEEeCC--CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSS--GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~--g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.+.||+|+||.||+|...+ +..||||++..... ........+.+|+++++.++|||||++++++.+.+ ..++|
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv 109 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI--IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES--YLYLV 109 (340)
T ss_pred EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC--EEEEE
Confidence 34899999999999998643 36899998864321 11234557889999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 9999999999999643 3689999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 545 SKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 545 ~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.... ...|+.......+.++|||||||++|||+||+.||.......... ........+. ..
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~---~i~~~~~~~p-----------~~ 250 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQ---KILEGIIYFP-----------KF 250 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHH---HHhcCCCCCC-----------CC
Confidence 2111 122333334456889999999999999999999998654322222 2222111111 11
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
....+.+++.+|++.+|++|+ +++++++.
T Consensus 251 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 251 LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 225678999999999999995 78888754
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=294.57 Aligned_cols=242 Identities=18% Similarity=0.321 Sum_probs=192.6
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.+.||+|++|.||+|..+++..++||.+..... ..+++.+|++++++++|+||+++++++.... ..++||
T Consensus 9 ~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~ 80 (261)
T cd05034 9 KLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM------SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE--PIYIVT 80 (261)
T ss_pred eeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc------CHHHHHHHHHHHhhCCCCCEeeeeeeeecCC--ceEEEE
Confidence 34589999999999999988888899998764321 2356899999999999999999999998766 579999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++++|.+++.......+++.++..++.+++.|++|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 999999999999866556799999999999999999999998 89999999999999999999999999987764221
Q ss_pred C---------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 546 K---------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 546 ~---------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
. .....|+.......++++||||||++++|++| |+.||.+.......+.+......+
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~------------- 224 (261)
T cd05034 158 YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP------------- 224 (261)
T ss_pred hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-------------
Confidence 1 01122333334567889999999999999999 999997644333322222111110
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.+...+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 225 RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 011123678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=302.22 Aligned_cols=249 Identities=18% Similarity=0.316 Sum_probs=191.4
Q ss_pred hhccccCCCCCCeEEEEEeC--------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecC
Q 005734 386 DFSNIIDTQSGCTIYKGTLS--------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDD 456 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~--------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 456 (680)
.+.+.||+|+||.||++... ++..+|+|.+..... .....++..|++++.++ +|+||++++++|...
T Consensus 21 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 21 VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT----EKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC----hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 34589999999999999752 235689998864321 22345688999999999 799999999999887
Q ss_pred CCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NI 522 (680)
+ ..++|+||+++|+|.+++.... ...++|.++++++.|++.||+|||+. +++||||||+||
T Consensus 97 ~--~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 97 G--PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred C--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 7 6799999999999999997532 13589999999999999999999988 999999999999
Q ss_pred eecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccH
Q 005734 523 YLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSI 591 (680)
Q Consensus 523 Lld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~ 591 (680)
++++++.+||+|||+++........ ....|+......++.++|||||||++|||++ |+.||......++
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 9999999999999998765421100 1122333334456888999999999999998 8889865432222
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.+.+ ...... ..+.....++.+++.+|++.+|++||+|.+|++.|+++....
T Consensus 252 ~~~~----~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 252 FKLL----KEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHH----HcCCCC---------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 2222 111100 111223368889999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=300.87 Aligned_cols=237 Identities=14% Similarity=0.217 Sum_probs=182.1
Q ss_pred cccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.||+|+||.||+++. .+++.||||++....... .......+..|++++++++||||+++++++..++ ..++|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv 78 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR-NQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG--KLYLI 78 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh-hhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC--eEEEE
Confidence 4799999999999985 367889999986432111 1223456789999999999999999999998877 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.+++... ..+.+.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 79 LEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred EeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 9999999999998643 3578888999999999999999998 9999999999999999999999999998754322
Q ss_pred CCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.... ...|+.......+.++|||||||++|||+||+.||...... +...........+
T Consensus 154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~---~~~~~~~~~~~~~----------- 219 (323)
T cd05584 154 GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK---KTIDKILKGKLNL----------- 219 (323)
T ss_pred CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH---HHHHHHHcCCCCC-----------
Confidence 1111 12233333445678899999999999999999999764422 2222222221111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
+.....++.+++.+|++.+|++|| +++++++
T Consensus 220 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 220 PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 111225788999999999999999 7777765
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=298.43 Aligned_cols=247 Identities=21% Similarity=0.318 Sum_probs=189.7
Q ss_pred hhhccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC
Q 005734 385 EDFSNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE 457 (680)
Q Consensus 385 ~~~~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 457 (680)
..+.+.||+|+||.||+++. .++..||||+++.... ......+.+|+++++++ +|+||++++++|...+
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH----SSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC----hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 33458999999999999974 2345789988764321 23345789999999999 7999999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGl 537 (680)
..++|+||+++|+|.++++......+++.++.+++.+++.||+|||+. +|+||||||+||++++++.++++|||+
T Consensus 113 --~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 113 --PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred --ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcc
Confidence 579999999999999999765545589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 538 TTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 538 a~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
++........ ....|+.......+.++|||||||++|||+| |+.||........ ............
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~---~~~~~~~~~~~~ 264 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK---FYKLIKEGYRMA 264 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH---HHHHHHcCCcCC
Confidence 9865432110 0112333334456788999999999999998 9999875432111 111111111000
Q ss_pred cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 607 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.+.....++.+++.+|++.+|++||++.|+++.|+++
T Consensus 265 ---------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 265 ---------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0111235789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=292.74 Aligned_cols=244 Identities=18% Similarity=0.329 Sum_probs=183.9
Q ss_pred cccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.||+|+||.||+|... ++..+|+|.+.... .......+.+|+.++++++||||++++++|...+. ..++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv 75 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT----DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG-SPLVV 75 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC----CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC-CcEEE
Confidence 47899999999999863 23568888774322 12345678899999999999999999998875443 46899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||+++|+|.++++... ..+++..++.++.+++.||+|||+. +++||||||+|||+++++.+||+|||+++.....
T Consensus 76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCC
Confidence 99999999999997443 3578889999999999999999988 9999999999999999999999999999765321
Q ss_pred CC------------cccccccCCCCCCCCCCCCeeehhHHHHHHHhC-CCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 545 SK------------VSDDIENSVLPPLADPETNIYSFGILMLEIISG-KLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 545 ~~------------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
.. .....|+.......+.++|||||||++|||+|| ..||......+....+ ... ....
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~---~~~-~~~~----- 222 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL---LQG-RRLL----- 222 (262)
T ss_pred cceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---hcC-CCCC-----
Confidence 10 011123333345568889999999999999995 5556543322222222 111 1100
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+...+..+.+++.+||+.+|++||++.||++.|+++..
T Consensus 223 ----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 223 ----QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 011123578899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=309.48 Aligned_cols=242 Identities=19% Similarity=0.294 Sum_probs=197.9
Q ss_pred ccccCCCCCCeEEEEEeC--CCC--EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g~--~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
-++||+|.||.|++|.|. .|+ .||||++...... ....+|.+|+.+|.+++|+|+++|+|...+. -..+
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~----~~mddflrEas~M~~L~H~hliRLyGvVl~q---p~mM 187 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN----AIMDDFLREASHMLKLQHPHLIRLYGVVLDQ---PAMM 187 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc----hhHHHHHHHHHHHHhccCcceeEEeeeeccc---hhhH
Confidence 378999999999999984 454 5788887654321 2456899999999999999999999999873 3589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+|.++.|||.+.|+......+-......+|.|||.||+||.++ ++|||||..+|+||-..-.+||+||||.+.+..
T Consensus 188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 99999999999999975666788888889999999999999999 999999999999999888999999999998874
Q ss_pred CCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
...+. ...+|+.....++.++|||+|||++|||+| |..||.+.....+.+.+. +.+.+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD----~~erL------ 334 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID----AGERL------ 334 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc----ccccC------
Confidence 43221 223455556788999999999999999999 999998876555554443 11111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.-++.|.+.++++++.||...|++|||+.+|.+.+-..
T Consensus 335 ---pRPk~csedIY~imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 335 ---PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred ---CCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence 23456789999999999999999999999998655443
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=291.65 Aligned_cols=249 Identities=16% Similarity=0.247 Sum_probs=192.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||++.. .+|..++||.+...... ......+|.+|++++++++|+||+++++++.+++ ..+++||
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v~e 82 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM--DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVLE 82 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhh--hHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC--eEEEEEE
Confidence 47899999999999996 58899999987653321 1334567999999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|+++++|.+++... ....++|..+.+++.++++||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 99999999998632 335689999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.... ...|+.......+.++||||||+++|||++|+.||.... .+........... ..+.. .
T Consensus 160 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~-------~~~~~--~ 229 (267)
T cd08229 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCKKIEQC-------DYPPL--P 229 (267)
T ss_pred CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc-chHHHHhhhhhcC-------CCCCC--C
Confidence 2110 112333333456778999999999999999999996543 2222222211110 00100 0
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
......++.+++.+||+.+|++||||.+|.+.++++.
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 230 SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1223467899999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=318.62 Aligned_cols=248 Identities=15% Similarity=0.284 Sum_probs=197.8
Q ss_pred ccccCCCCCCeEEEEEeCCC-CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceee-EEe---cCC-CCc
Q 005734 388 SNIIDTQSGCTIYKGTLSSG-VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIG-YCE---DDE-PFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g-~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g-~~~---~~~-~~~ 460 (680)
.+.|.+|||+.||.+....+ ..+|+|++...+ +...+...+||++|++++ |+|||.+++ ... ..+ .++
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d-----e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND-----EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCC-----HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 47899999999999998655 999999987654 456778999999999997 999999999 332 222 457
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+|.||||++|+|-+++..+....|+..++++|+.++++|+++||. +.|+|||||||-+||||+.++..||||||-|.-
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 8999999999999999986655569999999999999999999998 588999999999999999999999999998865
Q ss_pred cCCCC-C-----------cccccccCCC--------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhc
Q 005734 541 ALPKS-K-----------VSDDIENSVL--------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600 (680)
Q Consensus 541 ~~~~~-~-----------~~~~~~~~~~--------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~ 600 (680)
..... . ...+.+.|.. ....++|+|||++||+||-|+....||++....-
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la---------- 265 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA---------- 265 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----------
Confidence 43211 0 0112233333 3356899999999999999999999998643211
Q ss_pred CCCCcccccCcccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 601 EPRNFSCMIDPSLKS-FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~-~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
+++....- ........+.+||..||+++|++||++-+|+..+.++......
T Consensus 266 -------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 266 -------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred -------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence 11111110 1135668999999999999999999999999999999765544
|
|
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=291.55 Aligned_cols=235 Identities=19% Similarity=0.343 Sum_probs=176.6
Q ss_pred cccCCCCCCeEEEEEeCC-------------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 389 NIIDTQSGCTIYKGTLSS-------------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-------------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
+.||+|+||.||+|+..+ ...|++|++.... ......|..|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-----RDISLAFFETASMMRQVSHKHIVLLYGVCVR 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 468999999999998632 2247777654322 2334578899999999999999999999988
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC------
Q 005734 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA------ 529 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~------ 529 (680)
.. ..++||||+++|+|..+++... ..+++..+++++.||++||+|||+. +|+||||||+|||++.++.
T Consensus 76 ~~--~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 76 DV--ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred CC--CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCc
Confidence 76 6799999999999999886433 4689999999999999999999998 9999999999999987654
Q ss_pred -eEEcccccccccCCCCCc----ccccccCCC-CCCCCCCCCeeehhHHHHHHH-hCCCCCCccccccHHHHHHHHhcCC
Q 005734 530 -AKVAEICFTTIALPKSKV----SDDIENSVL-PPLADPETNIYSFGILMLEII-SGKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 530 -~ki~DFGla~~~~~~~~~----~~~~~~~~~-~~~~s~~sDVySfGvvllEll-tG~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
++++|||++......... ....|+... ...++.++|||||||++|||+ +|+.|+......+... .....
T Consensus 150 ~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~----~~~~~ 225 (262)
T cd05077 150 FIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER----FYEGQ 225 (262)
T ss_pred eeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH----HHhcC
Confidence 899999998765432211 122344332 345678899999999999998 5888886533211111 11110
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
.. .. .....++.+++.+||+.||++||++.+|++.|
T Consensus 226 ~~---~~--------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 226 CM---LV--------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred cc---CC--------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 00 01125688999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=296.35 Aligned_cols=250 Identities=16% Similarity=0.291 Sum_probs=186.5
Q ss_pred hccccCCCCCCeEEEEEeC-----------------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccce
Q 005734 387 FSNIIDTQSGCTIYKGTLS-----------------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNL 449 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-----------------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l 449 (680)
+.+.||+|+||.||++... ++..+|+|+...... .....+|.+|++++++++|+||+++
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN----KNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCcceE
Confidence 3488999999999998532 234688888764321 2345679999999999999999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 005734 450 IGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE---------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSH 520 (680)
Q Consensus 450 ~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~---------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~ 520 (680)
++++...+ ..++||||+++|+|.+++.... ...+++.+..+++.+++.||+|||+. +++||||||+
T Consensus 85 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 85 LAVCITSD--PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred EEEEecCC--ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 99998877 5699999999999999986432 13578999999999999999999998 9999999999
Q ss_pred CeeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh--CCCCCCcccc
Q 005734 521 CIYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS--GKLPYCEEKE 588 (680)
Q Consensus 521 NILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt--G~~p~~~~~~ 588 (680)
||++++++.++++|||+++........ ....++....+.++.++|||||||++|||+| |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 999999999999999999865422110 0111222233457889999999999999998 7788865433
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
................ ....+ .+..++..+.+++.+||+.+|++||+|.+|++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQVIENTGEFFRDQGR--QVYLP----KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHHHhhccc--cccCC----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 3322222221111100 00001 112234678999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=302.81 Aligned_cols=237 Identities=15% Similarity=0.176 Sum_probs=183.5
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||.||++.. .+|..||+|++...... .......+..|++++.+++||||+++.+++...+ ..++||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~--~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~--~~~lv~E~ 76 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV--AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVMEY 76 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC--EEEEEEeC
Confidence 3689999999999986 47899999998643211 1234456788999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
+++|+|.+++... ..+++.....++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+++.......
T Consensus 77 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 151 (325)
T cd05594 77 ANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 151 (325)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc
Confidence 9999999988543 368999999999999999999996 5 899999999999999999999999999875432111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||+||+.||.........+ ........+ +.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~---~i~~~~~~~-----------p~ 217 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE---LILMEEIRF-----------PR 217 (325)
T ss_pred ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH---HHhcCCCCC-----------CC
Confidence 1 1122333334567889999999999999999999997644222222 221111111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
....++.+++.+|++.||++|+ ++.++++.
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 218 TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 1235788999999999999997 89988754
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=297.36 Aligned_cols=244 Identities=16% Similarity=0.281 Sum_probs=187.4
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|..+ .+..||||.+..... ......+.+|+.++++++|+||+++++++.+.+ ..
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~ 84 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS----LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ--PT 84 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--Cc
Confidence 489999999999999753 245789998753321 223456889999999999999999999998877 57
Q ss_pred EEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKE--------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~--------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~ 533 (680)
++||||+++|+|.+++.... ....++..+.+++.|++.||+|||+. +|+||||||+||++++++.+|++
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEEC
Confidence 99999999999999996421 23567888999999999999999988 99999999999999999999999
Q ss_pred ccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++........ ....|+......++.++|||||||++|||++ |+.||......+..+. ....
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~---~~~~- 237 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF---VMDG- 237 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---HHcC-
Confidence 99998865321110 1122333334556889999999999999999 7888875432222222 2111
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
... ..+......+.+++.+|++.+|++||+|.++++.|++..
T Consensus 238 ~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 238 GYL---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 110 111222368999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=295.82 Aligned_cols=242 Identities=15% Similarity=0.299 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|... ++..||+|.+..... ......|.+|++++.+++|+||+++++++.... ..
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~ 84 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ--PT 84 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC----HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--Cc
Confidence 489999999999999874 246799998754321 233457889999999999999999999998876 67
Q ss_pred EEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKE--------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~--------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~ 533 (680)
++||||+++|+|.+++.... ...++|..++.++.+++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 99999999999999996432 23578999999999999999999988 99999999999999999999999
Q ss_pred ccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++........ ....|+.......+.++|||||||++||++| |+.||.........+.+. ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~----~~ 237 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI----DG 237 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh----cC
Confidence 99998765432111 1122333344567889999999999999998 999997544333333332 11
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
... ..+.....++.+++.+||+.+|++|||+.++++.|++
T Consensus 238 ~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 238 GHL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 100 0111224688999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=289.67 Aligned_cols=249 Identities=14% Similarity=0.269 Sum_probs=194.2
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||+|++|.||+|... +|+.||+|.++...... ......+.+|++++++++|+|++++++++.+.+ ..++||
T Consensus 6 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~--~~~lv~ 81 (267)
T cd08224 6 IEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD--AKARQDCLKEIDLLKQLDHPNVIKYLASFIENN--ELNIVL 81 (267)
T ss_pred eeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc--hhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEEE
Confidence 3488999999999999986 88999999886433221 234567999999999999999999999998876 679999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 466 EYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 466 ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||+++|+|.+++... ....+++.++++++.++++||+|||+. +|+||||||+||++++++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 335689999999999999999999998 999999999999999999999999999876543
Q ss_pred CCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
..... ...|+......++.++|||||||++|||++|+.||.... .+..+........ ... .
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~--~~~--------~ 227 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCKKIEKC--DYP--------P 227 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC-ccHHHHHhhhhcC--CCC--------C
Confidence 21110 112333334456788999999999999999999986543 2333332222111 000 0
Q ss_pred CC-HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 616 FK-QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 616 ~~-~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.+ ......+.+++.+||..+|++||++.+|+++|+++.
T Consensus 228 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 228 LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11 133467889999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=292.38 Aligned_cols=245 Identities=14% Similarity=0.219 Sum_probs=184.7
Q ss_pred HHHhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC
Q 005734 381 DTACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457 (680)
Q Consensus 381 ~~~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 457 (680)
+.+++++. ..||+|+||.||+|+.. ++..|++|.+.... ....+.+.+|++++++++|+||+++++++..++
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC-----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC
Confidence 34445554 79999999999999964 67889999876543 223457899999999999999999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcc
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHL--DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAE 534 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~~~~l--~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~D 534 (680)
..++|+||+++++|.++++... ..+ ++..+..++.|+++||+|||+. +|+||||||+||+++. ++.++|+|
T Consensus 79 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 79 --FFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred --EEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEec
Confidence 6799999999999999997542 234 8888999999999999999998 9999999999999986 67999999
Q ss_pred cccccccCCCCCc--------ccccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC
Q 005734 535 ICFTTIALPKSKV--------SDDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 535 FGla~~~~~~~~~--------~~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
||++......... ....|+.... ..++.++|||||||++|||++|+.||..........+........
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-- 230 (268)
T cd06624 153 FGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH-- 230 (268)
T ss_pred chhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccC--
Confidence 9998765321110 1112332211 235788999999999999999999997543222211111111110
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+ ..+.....++.+++.+||+.+|++|||+.|++.
T Consensus 231 ------~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 231 ------P---EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ------C---CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 1 112223367889999999999999999999986
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=302.06 Aligned_cols=236 Identities=19% Similarity=0.304 Sum_probs=188.2
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||+|+.|.||.+.- .+++.||||++...... ..+-...|+.+|+..+|+|||.++..+..++ +.+.||||
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~-----~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d--eLWVVMEy 351 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP-----KKELLLNEILVMRDLHHPNIVNFLDSYLVGD--ELWVVMEY 351 (550)
T ss_pred hhhccccccceeeeeeccCCceEEEEEEEeccCC-----chhhhHHHHHHHHhccchHHHHHHHHhcccc--eeEEEEee
Confidence 6899999999999984 67899999999765422 2344779999999999999999998887776 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+.+... .++..++..|+.++++||+|||.. +|+|||||++|||++.++.+||+|||++..+......
T Consensus 352 m~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K 425 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK 425 (550)
T ss_pred cCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccCc
Confidence 9999999998543 489999999999999999999999 9999999999999999999999999999887654321
Q ss_pred c---cc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S---DD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~---~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. .. .|+......+.+|.||||+|++++||+-|..||..+.+......+..... |.+. .++.
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~----------P~lk-~~~k 494 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT----------PKLK-NPEK 494 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCC----------CCcC-Cccc
Confidence 1 11 23333445678999999999999999999999976443322222222111 1111 1223
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.++..+|++.|+++|+++.|+++.
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 34689999999999999999999999874
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=294.76 Aligned_cols=249 Identities=20% Similarity=0.298 Sum_probs=189.0
Q ss_pred ccccCCCCCCeEEEEEeCC-----------------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCccccee
Q 005734 388 SNIIDTQSGCTIYKGTLSS-----------------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~-----------------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~ 450 (680)
.+.||+|+||.||+++..+ +..||+|.+..... .....+|.+|++++.+++|+||++++
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS----DNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC----HHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 4789999999999998642 24578888764432 24456899999999999999999999
Q ss_pred eEEecCCCCceEEEEEecCCCChhhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 005734 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE---------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521 (680)
Q Consensus 451 g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~---------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~N 521 (680)
++|..++ ..++|+||+++++|.+++.... ...+++..++.++.+++.||+|||+. +|+||||||+|
T Consensus 86 ~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 86 GVCTVDP--PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEecCC--CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 9998876 6799999999999999986432 13689999999999999999999998 99999999999
Q ss_pred eeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh--CCCCCCccccc
Q 005734 522 IYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS--GKLPYCEEKEL 589 (680)
Q Consensus 522 ILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt--G~~p~~~~~~~ 589 (680)
|++++++.++|+|||+++........ ....|+......++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 99999999999999998765322110 1112333334467889999999999999998 67788654433
Q ss_pred cHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 590 SIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.....+............ ...+...+.++.+++.+|++.+|++|||+.||++.|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 241 QVIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 333333322211110000 01112233679999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=301.17 Aligned_cols=251 Identities=12% Similarity=0.175 Sum_probs=185.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +|..+|+|.+..... ......+.+|++++++++|+|||+++++|.+++ ..++|||
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 83 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICME 83 (333)
T ss_pred eccccCCCCEEEEEEEECCCCcEEEEEEeecccC----HHHHHHHHHHHHHHHHCCCCcccceeEEEEECC--EEEEEEe
Confidence 378999999999999975 688899998765421 234567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++....+++.+++.||+|||+.. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~ 159 (333)
T cd06650 84 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 159 (333)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc
Confidence 99999999999643 35889999999999999999999742 699999999999999999999999999876542211
Q ss_pred ------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC----------ccc---
Q 005734 547 ------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN----------FSC--- 607 (680)
Q Consensus 547 ------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~--- 607 (680)
.....|+......++.++|||||||++|||++|+.||.......+............. ...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (333)
T cd06650 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLS 239 (333)
T ss_pred ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhh
Confidence 1122344444456788999999999999999999999754322222111100000000 000
Q ss_pred ccCcc--------------cC----CCC-HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 608 MIDPS--------------LK----SFK-QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 608 ~~d~~--------------l~----~~~-~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..++. .. ... .....++.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 240 SYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred hhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 00000 00 000 0123568899999999999999999999753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=295.06 Aligned_cols=239 Identities=11% Similarity=0.099 Sum_probs=182.2
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
||+|+||+||++... +|+.+|||.+....... ....+.+..|++++++++|+||+++.+++.... ..++||||++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~ 76 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK--RKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT--DLCLVMTIMN 76 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh--hHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC--eEEEEEeCCC
Confidence 699999999999874 78899999886432211 223456789999999999999999999988776 6799999999
Q ss_pred CCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 470 NGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 470 ~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 153 (280)
T cd05608 77 GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK 153 (280)
T ss_pred CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc
Confidence 99999887532 335689999999999999999999998 9999999999999999999999999999765432111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS-IEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
....|+......++.++|||||||++|||+||+.||....... ............. ..+.
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 222 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV-----------TYPD 222 (280)
T ss_pred ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC-----------CCcc
Confidence 1122444444566889999999999999999999997543211 1111221111111 1112
Q ss_pred HHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
.....+.+++.+|++.+|++|| +++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 2346788999999999999999 5666665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=292.16 Aligned_cols=253 Identities=13% Similarity=0.228 Sum_probs=189.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC---ceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF---NRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~lV 464 (680)
+++|.|+||.||+|++. ++..||||++-.... .--+|+++|++++|||||+|.-++...... ...+|
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCC---------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 79999999999999975 568999998854331 123799999999999999999888654322 34689
Q ss_pred EEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEccccccccc
Q 005734 465 FEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIA 541 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~~~ 541 (680)
+||||. +|.+.++.- ....++-....-+..|+.+||+|||+. +|+||||||.|+|+|.+ +.+||||||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999987 999998732 345677777888999999999999997 99999999999999976 99999999999998
Q ss_pred CCCCCcccc-------cccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC---------C
Q 005734 542 LPKSKVSDD-------IENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR---------N 604 (680)
Q Consensus 542 ~~~~~~~~~-------~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~---------~ 604 (680)
...+..... .||.. ....++.+.||||.|||+.||+-|+.-|.++...+....+.+.+..+. .
T Consensus 177 ~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 177 VKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred ccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcc
Confidence 755433322 12221 134678999999999999999999999988765554444444443321 1
Q ss_pred cccccCcccCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhc
Q 005734 605 FSCMIDPSLKS------FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVIN 654 (680)
Q Consensus 605 ~~~~~d~~l~~------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~ 654 (680)
..+.-.|.+.. .......+.++++.++++.+|.+|.++.|++.. ++++++
T Consensus 257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 11111122211 223345788999999999999999999999854 555543
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=303.33 Aligned_cols=232 Identities=15% Similarity=0.197 Sum_probs=180.0
Q ss_pred cccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.||+|+||.||+++. .+|+.+|||++...... ......+..|++++++++||||+++++++.+++ ..++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK---VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG--KLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh---hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--EEEEE
Confidence 4789999999999875 36889999998643211 223446788999999999999999999998877 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 77 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 151 (318)
T cd05582 77 LDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 151 (318)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCC
Confidence 9999999999998643 3689999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.... ...|+.......+.++|||||||++|||+||+.||......... .........+
T Consensus 152 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~---~~i~~~~~~~----------- 217 (318)
T cd05582 152 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM---TMILKAKLGM----------- 217 (318)
T ss_pred CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH---HHHHcCCCCC-----------
Confidence 1111 11233333345688999999999999999999999764432222 2222221111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMND 644 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~e 644 (680)
+......+.+++.+|++.||++||++.+
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1112357889999999999999999554
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=303.96 Aligned_cols=240 Identities=18% Similarity=0.285 Sum_probs=194.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
...||+|+.|.|-.|+. .+|+.+|||++..... ..........+|+-+|+-+.||||++++.++.+.. +.|||.|
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~--~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~--~lylvlE 92 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSE--LSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ--HLYLVLE 92 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccc--cccccccchhhhhHHHHHhcCCCeeeeeeeeccCc--eEEEEEE
Confidence 46799999999999996 6899999999976531 11233456789999999999999999999999888 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|.|++++-.+ ++++..+-.++..||..|+.|+|+. +|+||||||+|+|||+++++||+|||+|.+-.++.-
T Consensus 93 yv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 93 YVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred ecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 99999999999654 3788999999999999999999999 999999999999999999999999999988664432
Q ss_pred c--ccccccCCCCC------CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--SDDIENSVLPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--~~~~~~~~~~~------~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|.|.+|+ |-..++||||.||||+.|+||+.||++++ +...+.+..+..-.+ +.
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN---ir~LLlKV~~G~f~M-----------Ps 233 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN---IRVLLLKVQRGVFEM-----------PS 233 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc---HHHHHHHHHcCcccC-----------CC
Confidence 1 12223444332 44678999999999999999999998644 444444443332222 22
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
....++.+|+.+++..||++|.|++||.+..-
T Consensus 234 ~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 234 NISSEAQDLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhhCch
Confidence 33468899999999999999999999998743
|
|
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=298.95 Aligned_cols=248 Identities=19% Similarity=0.319 Sum_probs=191.6
Q ss_pred hhccccCCCCCCeEEEEEeC--------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecC
Q 005734 386 DFSNIIDTQSGCTIYKGTLS--------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDD 456 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~--------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 456 (680)
.+.+.||+|+||.||+++.. ....+|+|.+..... .....++..|+++++++ +||||++++++|.+.
T Consensus 15 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 15 VLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT----DKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred eeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC----hHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 34589999999999999742 345688888764321 23356788999999999 699999999999877
Q ss_pred CCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NI 522 (680)
+ ..++|+||+++|+|.+++.... ...++|.++++++.|++.||+|||+. +|+||||||+||
T Consensus 91 ~--~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 91 G--PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred C--ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 6 6799999999999999996432 24589999999999999999999988 999999999999
Q ss_pred eecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccH
Q 005734 523 YLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSI 591 (680)
Q Consensus 523 Lld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~ 591 (680)
++++++.+||+|||+++........ ....|+......++.++|||||||++|||+| |+.||........
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~ 245 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL 245 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999865421110 1122333334567889999999999999999 8999875443333
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+.+. ..... ..+..+..++.+++.+||+.+|++||++.++++.|+++...
T Consensus 246 ~~~~~----~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 246 FKLLR----EGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHHH----cCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 33222 11110 01122335788999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=292.41 Aligned_cols=250 Identities=14% Similarity=0.286 Sum_probs=191.5
Q ss_pred hccccCCCCCCeEEEEEeC-----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 387 FSNIIDTQSGCTIYKGTLS-----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
+.+.||+|+||.||+++.. ++..+|||++...... ....+|.+|++++++++|+||+++++++........
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE----QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch----HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 3478999999999999864 3688999988654321 345689999999999999999999999987443367
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++||||+++|+|.+++.... ..++|..+..++.+++.||+|||+. +++||||||+||+++.++.++|+|||++...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999997543 3699999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCc-c----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-----------HHHHHHHHh
Q 005734 542 LPKSKV-S----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS-----------IEKWAADYL 599 (680)
Q Consensus 542 ~~~~~~-~----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-----------~~~~~~~~~ 599 (680)
...... . ...|+......++.++||||||++++||+||+.|+....... ........+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 522110 0 112333334456788999999999999999999976432111 011111111
Q ss_pred cCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 600 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
...... ..+..++.++.+++.+||+.+|++||+|.||+++|+.+.
T Consensus 240 ~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 240 KEGERL---------PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HcCCcC---------CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 111100 111223467999999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=289.57 Aligned_cols=243 Identities=19% Similarity=0.292 Sum_probs=179.0
Q ss_pred ccCCCCCCeEEEEEeCC---CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTLSS---GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~---g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.||+|+||.||+|+..+ +..+++|.+..... ......|.+|+.++++++||||++++|++.+.. ..++|||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 75 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS----VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT--PYLLVME 75 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--CcEEEEE
Confidence 68999999999998753 35688887754432 223457899999999999999999999998876 5699999
Q ss_pred ecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKE---MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~---~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.++++... ....++..+.+++.|++.||+|||+. +++||||||+||++++++++|++|||+++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccC
Confidence 999999999997432 23567888899999999999999998 999999999999999999999999999875432
Q ss_pred CCCcc-----cccccCCCCC------------CCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 544 KSKVS-----DDIENSVLPP------------LADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 544 ~~~~~-----~~~~~~~~~~------------~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
..... .....+..|+ ..+.++||||||+++|||++ |+.||............. .. ..
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~--~~ 227 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV---RE--QQ 227 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh---hc--cc
Confidence 21100 0011122222 24778999999999999997 999997543322222111 11 01
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
....++.+. ......+.+++..|| .+|++|||++||++.|+
T Consensus 228 ~~~~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 228 LKLPKPRLK---LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCCccC---CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111122211 112246788999999 58999999999998774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=294.33 Aligned_cols=241 Identities=20% Similarity=0.340 Sum_probs=186.0
Q ss_pred cccCCCCCCeEEEEEeCC-------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTLSS-------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
+.||+|+||.||+|+..+ +..++||.+..... .....+|.+|++++++++||||++++++|...+ ..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~ 74 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT----DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE--PQ 74 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc----hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC--Ce
Confidence 468999999999998742 25788887754321 233557899999999999999999999998776 67
Q ss_pred EEEEEecCCCChhhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-----CeE
Q 005734 462 MMVFEYAPNGTVFEHLHIK-----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-----AAK 531 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~-----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-----~~k 531 (680)
++||||+++|+|.++++.. ....++|.+++.++.+++.||+|||+. +++|+||||+||+++.+. .++
T Consensus 75 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~ 151 (269)
T cd05044 75 YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVK 151 (269)
T ss_pred EEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceE
Confidence 9999999999999999643 224589999999999999999999988 899999999999999877 899
Q ss_pred EcccccccccCCCCC----------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhc
Q 005734 532 VAEICFTTIALPKSK----------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLN 600 (680)
Q Consensus 532 i~DFGla~~~~~~~~----------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~ 600 (680)
++|||+++....... .....|+.......+.++|||||||++|||+| |+.||......+....+.
T Consensus 152 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~---- 227 (269)
T cd05044 152 IGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT---- 227 (269)
T ss_pred ECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh----
Confidence 999999876532211 11122444444567889999999999999998 999997544333322221
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
..... ..+...+..+.+++.+||+.+|++||++++|++.|++
T Consensus 228 ~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 AGGRL---------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCcc---------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11101 1112234678899999999999999999999998863
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=300.03 Aligned_cols=239 Identities=13% Similarity=0.247 Sum_probs=186.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||.|.. .+|..||||.+.............+...+|+.++++++ ||||++++.++.... ..++||
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~--~~~ivm 99 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT--KIYIVM 99 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC--eEEEEE
Confidence 48899999999999986 47899999966543211111123445668999999999 999999999999887 689999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEcccccccccC-C
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIAL-P 543 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~~~~-~ 543 (680)
||+.+|+|.+++.. ...+......+++.|++.|++|||+. +|+||||||+|||+|.+ +++||+|||++.... .
T Consensus 100 Ey~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~ 174 (370)
T KOG0583|consen 100 EYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE 174 (370)
T ss_pred EecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccccccCCC
Confidence 99999999999976 34688889999999999999999999 99999999999999999 999999999999873 2
Q ss_pred CCCc--cc-----ccccCCCC-C-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 544 KSKV--SD-----DIENSVLP-P-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 544 ~~~~--~~-----~~~~~~~~-~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
.... .. ..||.... . +...++||||+||+||.|++|+.||++.. ............-.+...++
T Consensus 175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~---~~~l~~ki~~~~~~~p~~~~---- 247 (370)
T KOG0583|consen 175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN---VPNLYRKIRKGEFKIPSYLL---- 247 (370)
T ss_pred CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc---HHHHHHHHhcCCccCCCCcC----
Confidence 2111 11 12333222 3 45688999999999999999999998743 33333333333222222221
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDII 646 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~ 646 (680)
..++..++.+|+..+|.+|+++.+|+
T Consensus 248 ------S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 248 ------SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 36789999999999999999999999
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=299.14 Aligned_cols=237 Identities=13% Similarity=0.165 Sum_probs=182.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||.||+|+.. +++.||||++...... .......+..|.+++..+ +||||+++++++.+.+ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~--~~~lv~E 76 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL--QDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD--RLFFVME 76 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh--hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--eEEEEEe
Confidence 46999999999999975 5789999998643211 123345678899999876 7999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|..++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 151 (321)
T cd05591 77 YVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV 151 (321)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCc
Confidence 99999999988643 3689999999999999999999998 999999999999999999999999999876432111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......+++++|||||||++|||+||+.||.........+ .......... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~---~i~~~~~~~p-----------~ 217 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFE---SILHDDVLYP-----------V 217 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHH---HHHcCCCCCC-----------C
Confidence 1 1122333334467889999999999999999999998654333322 2222211111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCC-------CHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRP-------TMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RP-------tm~ev~~~ 648 (680)
....++.+++.+|++.||++|| +++++++.
T Consensus 218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1225788999999999999999 77777643
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=295.92 Aligned_cols=242 Identities=17% Similarity=0.269 Sum_probs=187.3
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||++... ++..+|+|++..... ....++|.+|++++++++||||++++++|..+. ..
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~--~~ 83 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS----ADMQADFQREAALMAEFDHPNIVKLLGVCAVGK--PM 83 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC----HHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--cc
Confidence 378999999999999863 467899998764321 234567999999999999999999999998877 56
Q ss_pred EEEEEecCCCChhhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKE--------------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~--------------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~N 521 (680)
++|+||+++|+|.+++.... ...+++..+++++.+++.||+|||.. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 99999999999999996321 13578999999999999999999988 99999999999
Q ss_pred eeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccccc
Q 005734 522 IYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELS 590 (680)
Q Consensus 522 ILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~ 590 (680)
|++++++.++|+|||+++........ ....|+......++.++|||||||++|||++ |..||.+....+
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~ 240 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999998765322110 0112333334567889999999999999998 888986543222
Q ss_pred HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 591 IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
. ....... ... ..+...+.++.+++.+|++.+|++|||+.|+++.|++
T Consensus 241 ~---~~~~~~~-~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 V---IYYVRDG-NVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred H---HHHHhcC-CCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 2 2221111 110 1112234678999999999999999999999998873
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=292.31 Aligned_cols=247 Identities=14% Similarity=0.278 Sum_probs=187.5
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
-+.||+|+||.||.++. .++..||+|.+..... ......|.+|++++++++|+||+++.+++...+....+
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred ceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc----HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 37899999999999984 3578899998764331 23346799999999999999999999999876433578
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++++|.+++.... ..++|..++.++.+++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 85 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccc
Confidence 9999999999999986432 3689999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc------------cccHHHHHHHHh
Q 005734 543 PKSKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK------------ELSIEKWAADYL 599 (680)
Q Consensus 543 ~~~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~------------~~~~~~~~~~~~ 599 (680)
..... ....|+......+++++||||||+++|||+|++.|..... .......+ ...
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV-RVL 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH-HHH
Confidence 32110 0112333334457889999999999999999887653211 00111111 111
Q ss_pred cCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 600 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
...... ......+.++.+++.+|++.+|++||+++++++.|+++
T Consensus 240 ~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 EEGKRL---------PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HcCccC---------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111100 11122346899999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=290.34 Aligned_cols=245 Identities=15% Similarity=0.289 Sum_probs=191.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCC----EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGV----EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~----~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+|... +|. .+|+|....... .....++.+|++++++++|+||++++++|.. . ..+
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~ 84 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS----PKANKEILDEAYVMASVDHPHVVRLLGICLS-S--QVQ 84 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C--ceE
Confidence 478999999999999974 343 578887654332 3345678999999999999999999999987 3 579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+|+||+++|+|.+++.... ..+++...++++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 9999999999999997543 3589999999999999999999997 99999999999999999999999999998765
Q ss_pred CCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 543 PKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 543 ~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ....|+......++.++||||||++++|++| |+.||......++...+... ....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~----~~~~----- 231 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG----ERLP----- 231 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC----CCCC-----
Confidence 32111 1112333334566788999999999999999 99999765433433333211 1110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.+..+...+.+++.+||..+|++||++.++++.|+++....
T Consensus 232 ----~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 232 ----QPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred ----CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 01112256889999999999999999999999999986644
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=288.13 Aligned_cols=252 Identities=20% Similarity=0.344 Sum_probs=188.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC--CCCcccceeeEEecCCCC--ceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI--NHKNFVNLIGYCEDDEPF--NRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~~~~--~~~l 463 (680)
.+.||+|.||.||+|.++ |+.||||++.... ++++.+|.++...+ ||+||+.+++.-..++.. +.+|
T Consensus 216 ~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd--------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD--------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred EEEecCccccceeecccc-CCceEEEEecccc--------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 489999999999999996 7889999987543 55677888887654 999999999876544321 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE-----LNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~-----~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
|++|.++|||+|+|.. ..++-...++++..+|.||+|||.+ -+|.|.|||||+.|||+..++.+.|+|+|||
T Consensus 287 vTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred eeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 9999999999999964 4689999999999999999999954 4799999999999999999999999999999
Q ss_pred cccCCCCCccc-------ccccCCCCCCCCCC-----------CCeeehhHHHHHHHhC----------CCCCCcccc--
Q 005734 539 TIALPKSKVSD-------DIENSVLPPLADPE-----------TNIYSFGILMLEIISG----------KLPYCEEKE-- 588 (680)
Q Consensus 539 ~~~~~~~~~~~-------~~~~~~~~~~~s~~-----------sDVySfGvvllElltG----------~~p~~~~~~-- 588 (680)
.........-. ....|++|+..++. +||||||.|+||+..+ +.||.+..+
T Consensus 364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D 443 (513)
T KOG2052|consen 364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD 443 (513)
T ss_pred EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence 87654322111 11233444433322 8999999999999864 356654221
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+..+... .+-. ..+...++.++. ..+++..+.++|+.||..+|..|-|+-.|-+.|.++.+.
T Consensus 444 Ps~eeMrk-VVCv-~~~RP~ipnrW~--s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 444 PSFEEMRK-VVCV-QKLRPNIPNRWK--SDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred CCHHHHhc-ceee-cccCCCCCcccc--cCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 22222211 1111 111112222222 356778899999999999999999999999999988763
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=287.04 Aligned_cols=239 Identities=20% Similarity=0.337 Sum_probs=189.0
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
++||+|++|.||++...+++.|++|........ .....|.+|++++++++|+||+++++++.+.. ..++|+||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP----DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ--PIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH----HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--CeEEEEEcC
Confidence 468999999999999877999999987654321 34567999999999999999999999998877 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc-
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV- 547 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~- 547 (680)
++++|.+++.... ..+++..++.++.+++.||+|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 150 (251)
T cd05041 75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV 150 (251)
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCccee
Confidence 9999999996543 3689999999999999999999998 9999999999999999999999999998765421111
Q ss_pred ---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 ---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
....|+.......+.++|||||||+++||+| |..||...........+... ... ..+
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~----~~~---------~~~ 217 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG----YRM---------PAP 217 (251)
T ss_pred ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC----CCC---------CCC
Confidence 0122333334457889999999999999999 88888654432222222111 000 011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
...+.++.+++.+|+..+|++||++.|+++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 223468999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=316.28 Aligned_cols=237 Identities=13% Similarity=0.210 Sum_probs=183.9
Q ss_pred ccccCCCCCCeEEEEEeC-C-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-S-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|++|.||+|... + +..|++|.+.... ......+..|++++++++|||||++++++...+ ..+|||
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--~~~lv~ 144 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-----ERQAAYARSELHCLAACDHFGIVKHFDDFKSDD--KLLLIM 144 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC--EEEEEE
Confidence 489999999999999864 3 5678888664432 233456788999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 466 EYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 466 ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||+++|+|.++++.. ....+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 999999999988642 344688999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 KSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 ~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
.... ....|+......++.++|||||||++|||+||+.||....... .......... . +
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~~~~~~~~~--~----~-- 290 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---IMQQVLYGKY--D----P-- 290 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhCCC--C----C--
Confidence 2110 0112333334567888999999999999999999997644222 2222221110 0 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.....++.+++.+||+.+|++||++++++.
T Consensus 291 --~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 --FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11122357889999999999999999999875
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=289.26 Aligned_cols=238 Identities=17% Similarity=0.342 Sum_probs=186.9
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||++.. +++.+|+|...... ....|.+|++++++++|||++++++++.... .++|||
T Consensus 10 ~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---~~~v~e 78 (254)
T cd05083 10 LGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-------TAQAFLEETAVMTKLHHKNLVRLLGVILHNG---LYIVME 78 (254)
T ss_pred eeeeeccCCCCceEeccc-CCCceEEEeecCcc-------hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC---cEEEEE
Confidence 348999999999999985 57789999875432 2346889999999999999999999987643 589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.......+++..+++++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~ 155 (254)
T cd05083 79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD 155 (254)
T ss_pred CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccCC
Confidence 99999999999766555789999999999999999999988 999999999999999999999999999876532211
Q ss_pred cc-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 547 VS-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 547 ~~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.. ...|+......++.++||||||++++||++ |+.||...........+.. . ... + .....
T Consensus 156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~-~~~----~-----~~~~~ 222 (254)
T cd05083 156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK---G-YRM----E-----PPEGC 222 (254)
T ss_pred CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC---C-CCC----C-----CCCcC
Confidence 11 122444444567889999999999999998 9999976443222222211 1 100 0 11223
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
+..+.+++.+||+.+|++||++++++..|++
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 4678899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=290.77 Aligned_cols=245 Identities=17% Similarity=0.289 Sum_probs=189.9
Q ss_pred hccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 387 FSNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
+.+.||+|+||.||+|...+ ...|+||....... ....+.|.+|++++++++||||++++++|.+. ..+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---~~~ 82 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS----PSVREKFLQEAYIMRQFDHPHIVKLIGVITEN---PVW 82 (270)
T ss_pred eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC----HHHHHHHHHHHHHHHhCCCCchhceeEEEcCC---CcE
Confidence 45899999999999998643 24688887754331 23456799999999999999999999998764 358
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..++.++.+++.||+|||+. +++||||||+||+++.++.+|++|||+++...
T Consensus 83 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 83 IVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999999996433 3689999999999999999999988 99999999999999999999999999998754
Q ss_pred CCCCc---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 543 PKSKV---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 543 ~~~~~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ....|+......++.++||||||++++|+++ |+.||......+....+.. . ....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~---~-~~~~------ 228 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN---G-ERLP------ 228 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc---C-CcCC------
Confidence 32111 1112333333456788999999999999996 9999976543333222211 1 1110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+...+.++.+++.+|+..+|++|||+.++++.|+++...
T Consensus 229 ---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 229 ---MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1122346789999999999999999999999999997653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=286.92 Aligned_cols=242 Identities=15% Similarity=0.234 Sum_probs=187.6
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||++.. .+++.+++|.+...............+.+|++++++++||||+++++++.+.+ ..++|+|
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 84 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE--TLSIFME 84 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC--eEEEEEE
Confidence 37999999999999986 46899999988755433322334567899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+.+++.+++.||+|||+. +|+||||||+||++++++.++|+|||+++.......
T Consensus 85 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 85 YMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred ECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999998643 3588999999999999999999998 999999999999999999999999999876542111
Q ss_pred c-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 V-----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ~-----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
. ....|+.......+.++||||||+++|||++|+.||......... ......... ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~~~---------~~ 227 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI---FKIATQPTN---------PQ 227 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH---HHHhccCCC---------CC
Confidence 1 112233333345678899999999999999999999754322111 111111110 01
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+......+.+++.+||..+|++|||+.++++.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 122233678899999999999999999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=298.86 Aligned_cols=231 Identities=16% Similarity=0.201 Sum_probs=178.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||.||+|+.. +++.||||++...... .....+.+..|.+++... +||||+++++++...+ ..++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~--~~~iv~E 76 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL--QDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD--RLFFVME 76 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh--hccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC--EEEEEEc
Confidence 46899999999999975 6889999988643211 123345678889998877 6999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 77 y~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~ 151 (320)
T cd05590 77 FVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK 151 (320)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC
Confidence 99999999988643 3689999999999999999999998 999999999999999999999999999876432111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||+||+.||.......+.+ .......... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~---~i~~~~~~~~-----------~ 217 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFE---AILNDEVVYP-----------T 217 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH---HHhcCCCCCC-----------C
Confidence 1 1112333334556889999999999999999999997654333322 2222211111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
....++.+++.+|++.||++||++
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 218 WLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCC
Confidence 122578899999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=297.55 Aligned_cols=232 Identities=16% Similarity=0.206 Sum_probs=177.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHH-HHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVD-TLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||+||+|+.. +|+.||||++....... ......+..|.. +++.++||||+++++++.+.+ ..++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~--~~~lv~e 76 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK--KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD--KLYFVLD 76 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh--hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC--EEEEEEc
Confidence 36899999999999975 78999999986432111 222344555554 567899999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 77 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 151 (323)
T cd05575 77 YVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK 151 (323)
T ss_pred CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC
Confidence 99999999998643 3689999999999999999999998 999999999999999999999999999876432111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||+||+.||..... .+............ .+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~----~~------- 217 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---AEMYDNILNKPLRL----KP------- 217 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---HHHHHHHHcCCCCC----CC-------
Confidence 1 11224444445678899999999999999999999976432 22223332221111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMN 643 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ 643 (680)
.....+.+++.+|++.||++||++.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 NISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1235788999999999999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=287.94 Aligned_cols=240 Identities=19% Similarity=0.371 Sum_probs=190.4
Q ss_pred cccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.||+|+||.||+|...+ +..++||.+...... ...+.+.+|++.+.+++|+||+++++++.... ..++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE----EERKDFLKEARVMKKLGHPNVVRLLGVCTEEE--PLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch----hHHHHHHHHHHHHhhcCCCChheeeeeecCCC--ceEEE
Confidence 468999999999999854 788999988654321 14567999999999999999999999998866 67999
Q ss_pred EEecCCCChhhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 005734 465 FEYAPNGTVFEHLHIKE-------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~-------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGl 537 (680)
+||+++|+|.+++.... ...+++..+.+++.++++||+|||+. +++||||||+||++++++.+||+|||.
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccc
Confidence 99999999999997542 35799999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCC-----c-----ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 538 TTIALPKSK-----V-----SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 538 a~~~~~~~~-----~-----~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
+........ . ....|+.......+.++||||+|++++||++ |+.||.......+.+.+.. . ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~---~-~~~- 226 (262)
T cd00192 152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK---G-YRL- 226 (262)
T ss_pred ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---C-CCC-
Confidence 987754321 0 1112333333466888999999999999999 6999976543333333222 1 100
Q ss_pred cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 607 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
..+.....++.+++.+|+..+|++||++.|+++.|+
T Consensus 227 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 --------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111222468899999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=295.03 Aligned_cols=250 Identities=12% Similarity=0.139 Sum_probs=183.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. +++.+|||++...... ....+.+.+|++++++++|+||+++++++...+ ..++|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 80 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN---EEVKETTLRELKMLRTLKQENIVELKEAFRRRG--KLYLVFE 80 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhhHHHHHHHHHhCCCccccchhhhEecCC--EEEEEEe
Confidence 378999999999999985 6788999988654321 223456889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++++.+..+.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 999877765543 234689999999999999999999988 999999999999999999999999999987642211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC-----------CCCcc
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE-----------PRNFS 606 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~ 606 (680)
. ....|+......++.++|||||||++|||++|+.||......+....+...... .....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 1 112234333446788999999999999999999999754322221111111100 00000
Q ss_pred cccCcccC-------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 CMIDPSLK-------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ~~~d~~l~-------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....+... .........+.+++.+|++.||++|||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 001123457899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=288.41 Aligned_cols=233 Identities=20% Similarity=0.354 Sum_probs=177.4
Q ss_pred cccCCCCCCeEEEEEeCCCC-----------EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC
Q 005734 389 NIIDTQSGCTIYKGTLSSGV-----------EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~-----------~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 457 (680)
+.||+|+||.||+|...+.. .+++|...... .....|.+|++++++++|+||++++|+|.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH------RDSLAFFETASLMSQLSHKHLVKLYGVCVR-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch------hhHHHHHHHHHHHHcCCCcchhheeeEEec-C
Confidence 46899999999999986433 46666554322 115679999999999999999999999987 4
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-------Ce
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-------AA 530 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-------~~ 530 (680)
..++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 74 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 74 --ENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred --CcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeE
Confidence 5699999999999999997543 2689999999999999999999988 999999999999999887 79
Q ss_pred EEcccccccccCCCCC----cccccccCCCCC--CCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCC
Q 005734 531 KVAEICFTTIALPKSK----VSDDIENSVLPP--LADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603 (680)
Q Consensus 531 ki~DFGla~~~~~~~~----~~~~~~~~~~~~--~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~ 603 (680)
||+|||+++....... .....|+..... ..+.++|||||||++|||++ |..|+..........+.. ...
T Consensus 148 kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~----~~~ 223 (259)
T cd05037 148 KLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ----DQH 223 (259)
T ss_pred EeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh----cCC
Confidence 9999999987543211 112234443333 56788999999999999999 577776543222211111 101
Q ss_pred CcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 604 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
... .+ ....+.+++.+||..+|++||++.+|++.|
T Consensus 224 ~~~---~~--------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 224 RLP---MP--------DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCC---CC--------CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000 00 016788999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=298.04 Aligned_cols=240 Identities=15% Similarity=0.191 Sum_probs=181.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||.||+++.. +++.+|+|++....... ......+..|+.++.++ +|||||++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~E 76 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIE 76 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc--hhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC--EEEEEEe
Confidence 47999999999999975 67899999987542211 23345678899988877 7999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|..++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~ 151 (329)
T cd05618 77 YVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 151 (329)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC
Confidence 99999999888543 3689999999999999999999998 999999999999999999999999999876432111
Q ss_pred --------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc-----cccHHHHHHHHhcCCCCcccccCccc
Q 005734 547 --------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK-----ELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 547 --------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
.....|+......++.++|||||||++|||+||+.||.... ......++........ .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~-------- 222 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-I-------- 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-C--------
Confidence 11122444444567889999999999999999999995211 1122233322222111 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCC------HHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPT------MNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt------m~ev~~ 647 (680)
..+.....++.+++.+|++.||++||+ +.++++
T Consensus 223 -~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 223 -RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred -CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 011222357889999999999999998 456654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=291.63 Aligned_cols=235 Identities=17% Similarity=0.310 Sum_probs=176.2
Q ss_pred cccCCCCCCeEEEEEeCC--------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 389 NIIDTQSGCTIYKGTLSS--------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
+.||+|+||+||+|.... ...+++|.+.... .....+|..|+.+++.++|||||++++++..++ .
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~--~ 73 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-----RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD--E 73 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-----HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC--C
Confidence 468999999999998642 2236666654321 334567889999999999999999999999876 6
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--------eEE
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA--------AKV 532 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--------~ki 532 (680)
.++||||+++|+|.++++.+. ..++|..+++++.|++.||+|||+. +|+||||||+||+++.++. +++
T Consensus 74 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 74 SIMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred cEEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEe
Confidence 799999999999999997543 3689999999999999999999998 9999999999999987765 599
Q ss_pred cccccccccCCCCCcc----cccccCCCC-CCCCCCCCeeehhHHHHHHHhCC-CCCCccccccHHHHHHHHhcCCCCcc
Q 005734 533 AEICFTTIALPKSKVS----DDIENSVLP-PLADPETNIYSFGILMLEIISGK-LPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 533 ~DFGla~~~~~~~~~~----~~~~~~~~~-~~~s~~sDVySfGvvllElltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
+|||++.......... ...|+.... ..++.++|||||||++|||++|. .|+........... ......+
T Consensus 150 ~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~----~~~~~~~- 224 (258)
T cd05078 150 SDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF----YEDRHQL- 224 (258)
T ss_pred cccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH----HHccccC-
Confidence 9999987654322111 122333322 34678899999999999999985 55543322111111 1111111
Q ss_pred cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 607 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
+.....++.+++.+||+.+|++|||++++++.|
T Consensus 225 ----------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 225 ----------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ----------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 111225788999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=299.72 Aligned_cols=257 Identities=18% Similarity=0.305 Sum_probs=194.2
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeC--------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccce
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLS--------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNL 449 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~--------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l 449 (680)
++......+.+.||+|+||.||++... ++..||+|....... .....++.+|++++.++ +|+||+++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT----DKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC----HHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 333333445689999999999999742 123688887754321 23456799999999999 79999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 005734 450 IGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515 (680)
Q Consensus 450 ~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHr 515 (680)
+++|...+ ..++++||+++|+|.+++.... ...++|.++++++.|++.||+|||.. +|+||
T Consensus 84 ~~~~~~~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~ 158 (334)
T cd05100 84 LGACTQDG--PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHR 158 (334)
T ss_pred eEEEccCC--ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecc
Confidence 99998877 6799999999999999986421 24589999999999999999999998 99999
Q ss_pred CCCCCCeeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCC
Q 005734 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYC 584 (680)
Q Consensus 516 DlKp~NILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~ 584 (680)
||||+||++++++.+||+|||+++........ ....|+......++.++||||||+++|||++ |..||.
T Consensus 159 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 159 DLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred ccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999765422111 1122333334456788999999999999999 888987
Q ss_pred ccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 585 EEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
+....... ...... ... ..+.....++.+++.+||+.+|++||+|.|+++.|+++.....
T Consensus 239 ~~~~~~~~---~~~~~~-~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 239 GIPVEELF---KLLKEG-HRM---------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred CCCHHHHH---HHHHcC-CCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 54322222 222111 110 0111233678899999999999999999999999999975443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=289.10 Aligned_cols=242 Identities=21% Similarity=0.319 Sum_probs=177.4
Q ss_pred ccCCCCCCeEEEEEeCCC---CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTLSSG---VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~g---~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.||+|+||.||+|...++ ..+++|.+.... .......|.+|++.++.++|+||++++|+|.+.. ..++|||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~--~~~lv~e 75 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA----TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI--PYLLVLE 75 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC----ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC--ceEEEEE
Confidence 589999999999986443 457777654322 1234567899999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKE---MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~---~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++.... ....++....+++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccccc
Confidence 999999999997543 23457888899999999999999998 999999999999999999999999999876432
Q ss_pred CCCc-----c-----cccccCC-------CCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 544 KSKV-----S-----DDIENSV-------LPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 544 ~~~~-----~-----~~~~~~~-------~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
.... . ...|+.. .....+.++|||||||++|||++ |..||....+.+... .......
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~---~~~~~~~-- 227 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLK---QVVREQD-- 227 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH---HHhhccC--
Confidence 2110 0 1112211 12345778999999999999999 788887544322222 1111110
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
....++.+ .......+.+++..|| .||++||++++|++.|
T Consensus 228 ~~~~~~~~---~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 228 IKLPKPQL---DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred ccCCCCcc---cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 01111111 1223356778889999 5999999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=296.28 Aligned_cols=235 Identities=16% Similarity=0.198 Sum_probs=178.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|+.. +++.||||+++..... .......+..|.+++... +||||+++++++..++ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~--~~~lv~e 76 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL--EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE--HLFFVME 76 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEc
Confidence 36899999999999975 5788999998653211 122334556677777654 8999999999998777 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~ 151 (316)
T cd05592 77 YLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG 151 (316)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC
Confidence 99999999998643 3689999999999999999999998 999999999999999999999999999976432111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||++|+.||.+.....+. .........+ +.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~---~~i~~~~~~~-----------~~ 217 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELF---DSILNDRPHF-----------PR 217 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHH---HHHHcCCCCC-----------CC
Confidence 1 112233334456788999999999999999999999765432222 2222211111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMN-DII 646 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~-ev~ 646 (680)
....++.+++.+||+.+|++||++. ++.
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1225678999999999999999975 454
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=291.01 Aligned_cols=242 Identities=14% Similarity=0.135 Sum_probs=186.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||++... +++.+|+|.+....... ......+.+|++++++++|+||+++.+++..++ ..++||||
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 81 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK--RKGESMALNEKQILEKVNSQFVVNLAYAYETKD--ALCLVLTI 81 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh--hhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC--EEEEEEEe
Confidence 78999999999999874 78899999886543221 223456788999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 158 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI 158 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc
Confidence 9999999998755555799999999999999999999988 9999999999999999999999999998765322111
Q ss_pred -------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 548 -------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 548 -------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
....|+......++.++|||||||++|||+||+.||....+....+.+........ .. .....
T Consensus 159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~ 228 (285)
T cd05632 159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE---EV-------YSAKF 228 (285)
T ss_pred cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc---cc-------cCccC
Confidence 11224444445678899999999999999999999976443222222222222211 00 11122
Q ss_pred HHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
..++.+++..|++.+|++||+ +.+++.
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 356789999999999999999 556554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=278.51 Aligned_cols=249 Identities=14% Similarity=0.166 Sum_probs=193.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
|.|++|+||.||+|+.+ +++.||.|+++....++. ..-.-.+||.+|.+++|||||.+.......+-...|+||||
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G---FPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~ 158 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG---FPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEY 158 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccCC---CcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHH
Confidence 89999999999999974 788999999976543321 22346799999999999999999988876655578999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
|+. +|...++.-. +++...+...+..|+.+|++|||+. .|+|||||++|+|+.+.|..||+|||+||.+.....
T Consensus 159 ~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~ 233 (419)
T KOG0663|consen 159 VEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP 233 (419)
T ss_pred HHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCCccc
Confidence 987 9999987433 6788899999999999999999999 899999999999999999999999999999864311
Q ss_pred ccc-------ccccC-CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC----
Q 005734 547 VSD-------DIENS-VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK---- 614 (680)
Q Consensus 547 ~~~-------~~~~~-~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~---- 614 (680)
... ..|+. .....+++..|+||+|||+.|++++++-|.+..+.+....+-..+..+.. .+-|.+.
T Consensus 234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte---~iwpg~~~lp~ 310 (419)
T KOG0663|consen 234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSE---AIWPGYSELPA 310 (419)
T ss_pred CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCcc---ccCCCccccch
Confidence 111 11222 12456789999999999999999999999887776666665555543321 1111110
Q ss_pred -------C---------CCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 -------S---------FKQN-ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 -------~---------~~~~-~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. +... ..+.-++++...+..||.+|.|++|.++.
T Consensus 311 ~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 311 VKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred hhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1 1111 22567899999999999999999999864
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=302.63 Aligned_cols=241 Identities=16% Similarity=0.167 Sum_probs=186.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|... +|+.||||++...... .......+..|++++..++|+||+++++++.+++ ..++|||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI--KRNQIAHVRAERDILADADSPWIVKLYYSFQDEE--HLYLVME 81 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh--hccHHHHHHHHHHHHHhcCCCCccchhhheecCC--eEEEEEc
Confidence 378999999999999975 7899999998643211 1234567899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
|+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 82 YMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 99999999999754 4689999999999999999999998 99999999999999999999999999998654322
Q ss_pred ------------------------------------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc
Q 005734 546 ------------------------------------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL 589 (680)
Q Consensus 546 ------------------------------------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~ 589 (680)
......|+......++.++|||||||++|||+||+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 00011123333446788999999999999999999999765422
Q ss_pred cHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 005734 590 SIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT-MNDIIVQ 648 (680)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt-m~ev~~~ 648 (680)
.. ............ -+... ....++.+++.+|+. +|.+||+ ++++++.
T Consensus 237 ~~---~~~i~~~~~~~~---~p~~~----~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 ET---YNKIINWKESLR---FPPDP----PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HH---HHHHhccCCccc---CCCCC----CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 22 222221100000 00000 123678899999997 9999999 9999875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=287.06 Aligned_cols=244 Identities=17% Similarity=0.239 Sum_probs=176.2
Q ss_pred cccCCCCCCeEEEEEeCCCC---EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGV---EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~---~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.||+|+||.||+|...++. .+++|.+..... ....+.|.+|++++++++||||++++++|.+.. ..++||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--~~~lv~ 74 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS----SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI--PYLLVF 74 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC----hHHHHHHHHHHHHHhccCCcchhheEEEecCCC--ccEEEE
Confidence 36899999999999865443 344554433221 234568999999999999999999999999876 569999
Q ss_pred EecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 466 EYAPNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||+++|+|.++++... ....++.....++.|+++||+|||+. +++||||||+|||++.++.+||+|||++.....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYK 151 (268)
T ss_pred ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCc
Confidence 9999999999997532 23567778889999999999999998 999999999999999999999999999864321
Q ss_pred CCC----------cccccccCCC-------CCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 544 KSK----------VSDDIENSVL-------PPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 544 ~~~----------~~~~~~~~~~-------~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
... .....|+... ....+.++|||||||++|||++ |+.||....+.+... ...... .
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~---~~~~~~--~ 226 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLN---HVIKDQ--Q 226 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHH---HHHhhc--c
Confidence 100 0111222211 1234678999999999999997 577886543322222 222211 1
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
....++.+.. .....+.+++..|| .+|++||++++|++.|.
T Consensus 227 ~~~~~~~~~~---~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 227 VKLFKPQLEL---PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cccCCCccCC---CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1223333321 12256778999999 57999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=296.84 Aligned_cols=236 Identities=14% Similarity=0.175 Sum_probs=182.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||+||+++.. ++..||||++...... .......+..|.+++..+ +||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~--~~~lv~e 76 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL--QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD--RLFFVME 76 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh--hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--EEEEEEc
Confidence 46899999999999975 5789999998643211 123345678899999888 6999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|..++... ..+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 151 (318)
T cd05570 77 YVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV 151 (318)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC
Confidence 99999999988643 3689999999999999999999998 999999999999999999999999999875321111
Q ss_pred --------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 --------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 --------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.....|+......++.++|||||||++|||+||+.||.......... ......... +.
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~---~i~~~~~~~-----------~~ 217 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQ---SILEDEVRY-----------PR 217 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHH---HHHcCCCCC-----------CC
Confidence 11122344444567889999999999999999999997644322222 222211111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTM-----NDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm-----~ev~~ 647 (680)
....++.+++.+||+.||++||++ .++++
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 123578899999999999999999 77764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=293.39 Aligned_cols=243 Identities=14% Similarity=0.287 Sum_probs=186.6
Q ss_pred cccCCCCCCeEEEEEeC-CCC----EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGV----EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~----~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||.||+|... +|. .||+|.+..... .....++.+|+.++++++||||++++|+|.... .++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~---~~~ 85 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG----PKANVEFMDEALIMASMDHPHLVRLLGVCLSPT---IQL 85 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC---cee
Confidence 78999999999999863 454 467776653321 233456899999999999999999999997643 579
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
++||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccC
Confidence 999999999999986432 3689999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.... ....|+.......+.++|||||||++||++| |+.||.+.......+++.. .....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~------ 231 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK----GERLP------ 231 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC----CCCCC------
Confidence 2111 0112233334456788999999999999998 9999976543333333321 11110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+..+...+.+++.+||..+|++||+|+++++.|+++...
T Consensus 232 ---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 232 ---QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0111235788999999999999999999999999988544
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=269.96 Aligned_cols=248 Identities=18% Similarity=0.263 Sum_probs=192.0
Q ss_pred ccccCCCCCCeEEEEE-eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC---CCceEE
Q 005734 388 SNIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE---PFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~-~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~l 463 (680)
.+.+|+|||..||.++ +.++..+|+|++.... .++.+..++|++..++++||||++++.++..+. ..+.||
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccc-----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 4799999999999998 5688899999997765 345677899999999999999999999986432 225799
Q ss_pred EEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 464 VFEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
+++|...|+|.+.+... .+..++..+.++|+.|+++||.+||.. .|++.||||||.|||+++.+.+++.|||.++..
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQA 179 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence 99999999999999744 455799999999999999999999986 668999999999999999999999999998876
Q ss_pred CCCCCcc------------cccccCCCC--------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC
Q 005734 542 LPKSKVS------------DDIENSVLP--------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 542 ~~~~~~~------------~~~~~~~~~--------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
....... .....+.+| .-.++++|||||||+||+|+.|..||+... +.
T Consensus 180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~------------~~ 247 (302)
T KOG2345|consen 180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY------------QQ 247 (302)
T ss_pred ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh------------hc
Confidence 5211100 001112222 345889999999999999999999996321 01
Q ss_pred CCCcccc-cCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 602 PRNFSCM-IDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 602 ~~~~~~~-~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
++.+.-. ..+.+. .......+.+.+++..|++.||.+||+..+++..++.+.
T Consensus 248 GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111111 111111 001124578999999999999999999999999998764
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=301.98 Aligned_cols=257 Identities=15% Similarity=0.212 Sum_probs=183.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~l 463 (680)
.+.||+|+||.||+|+.. +|..||||++...... ......+.+|++++++++||||+++++++..... ...++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH---VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc---chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 478999999999999964 7899999988643211 1234568899999999999999999999864331 13699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|||||. ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 82 v~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 82 VFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 999995 6899988543 3689999999999999999999998 999999999999999999999999999986532
Q ss_pred CCCc-----------ccccccCCC--CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC------
Q 005734 544 KSKV-----------SDDIENSVL--PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN------ 604 (680)
Q Consensus 544 ~~~~-----------~~~~~~~~~--~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~------ 604 (680)
.... ....|+... ...+++++|||||||++|||+||+.||.+.........+......+..
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i 235 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRV 235 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 1110 011222211 145688999999999999999999999754422222222211111000
Q ss_pred ----cccc---cCc----ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 605 ----FSCM---IDP----SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 605 ----~~~~---~d~----~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
.... +.+ ............+.+++.+|++.+|++||+++|+++. ++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 236 RNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred hhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence 0000 000 0000001123567899999999999999999999965 44443
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=295.74 Aligned_cols=235 Identities=16% Similarity=0.194 Sum_probs=179.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|... +++.||||++...... .......+..|..++... +||||+++++++.+.+ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~e 76 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE--NLFFVME 76 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC--EEEEEEe
Confidence 36899999999999975 5788999998653211 112334567788888765 8999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
|+++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 77 y~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 151 (316)
T cd05619 77 YLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA 151 (316)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC
Confidence 99999999998643 3689999999999999999999998 99999999999999999999999999987532111
Q ss_pred -------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 -------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 -------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
......|+......++.++|||||||++|||+||+.||.......+.+.+.. ..... +.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~---~~~~~-----------~~ 217 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM---DNPCY-----------PR 217 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCC-----------Cc
Confidence 1111224444445678899999999999999999999976543333222211 11111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMN-DII 646 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~-ev~ 646 (680)
....++.+++.+|++.+|++||++. ++.
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1225678999999999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=301.91 Aligned_cols=240 Identities=17% Similarity=0.210 Sum_probs=182.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+++.. +|+.||||++..... ........+.+|++++..++|+||+++++++.+++ ..++||||
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~E~ 82 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN--YLYLIMEY 82 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--eEEEEECC
Confidence 78999999999999975 689999999864321 11234566889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 83 ~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 83 LPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 9999999999643 3689999999999999999999998 999999999999999999999999999876432100
Q ss_pred ---------------------------------------------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCC
Q 005734 547 ---------------------------------------------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKL 581 (680)
Q Consensus 547 ---------------------------------------------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~ 581 (680)
.....|+......++.++|||||||++|||++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 00111222233456788999999999999999999
Q ss_pred CCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 005734 582 PYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT---MNDIIVQ 648 (680)
Q Consensus 582 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt---m~ev~~~ 648 (680)
||.......... ........+. + +.. .....++.+++.+|+. +|.+|++ ++|+++.
T Consensus 238 Pf~~~~~~~~~~---~i~~~~~~~~--~-~~~----~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 238 PFCSDNPQETYR---KIINWKETLQ--F-PDE----VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCHHHHHH---HHHcCCCccC--C-CCC----CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 997654322222 2221111111 0 000 0122567888999986 9999998 8888763
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=295.46 Aligned_cols=232 Identities=15% Similarity=0.197 Sum_probs=176.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHH-HHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVD-TLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||.||+|+.. +|..||+|++...... .......+..|.. +++.++|||||++++++.+.+ ..++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~--~~~lv~e 76 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL--KKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE--KLYFVLD 76 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--HhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--EEEEEEc
Confidence 46999999999999974 6889999988643211 1223345556654 578899999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|..++... ..++......++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 151 (321)
T cd05603 77 YVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE 151 (321)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC
Confidence 99999999888543 3678888999999999999999998 999999999999999999999999999876422111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||+||+.||..... ..........+..+ +.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~-----------~~ 217 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---SQMYDNILHKPLQL-----------PG 217 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---HHHHHHHhcCCCCC-----------CC
Confidence 1 11123333344578899999999999999999999976432 22223322221111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMN 643 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ 643 (680)
....++.+++.+|++.+|.+||+..
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 2235788999999999999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=293.92 Aligned_cols=248 Identities=13% Similarity=0.198 Sum_probs=182.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|... ++..||+|++...... .....+.+|++++++++||||+++++++...+ ..++||||
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~ 84 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE----GAPCTAIREVSLLKNLKHANIVTLHDIIHTER--CLTLVFEY 84 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccC----CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC--eEEEEEeC
Confidence 78999999999999875 6889999988654321 12345778999999999999999999998776 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
++ |+|.+++... ...+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 85 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 85 LD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred CC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 97 5999988643 34578999999999999999999998 9999999999999999999999999998764321111
Q ss_pred --------ccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-----------Cccc
Q 005734 548 --------SDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-----------NFSC 607 (680)
Q Consensus 548 --------~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 607 (680)
....|+... ...++.++||||+||++|||+||+.||......+....+......+. .+..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 011233222 23467889999999999999999999976443332222222221110 0011
Q ss_pred ccCcccCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKS-----FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~-----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...+.... .......+..+++.+|++.||.+|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11111100 00112356789999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=295.88 Aligned_cols=240 Identities=14% Similarity=0.183 Sum_probs=182.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||.||+++.. +++.||||+++...... ......+..|..++.++ +||||+++++++.+.+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~--~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~--~~~lv~e 76 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND--DEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES--RLFFVIE 76 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC--EEEEEEe
Confidence 36899999999999975 68899999986532111 23345688999999998 6999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~ 151 (329)
T cd05588 77 FVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD 151 (329)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCC
Confidence 99999999988543 4699999999999999999999998 999999999999999999999999999875321111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc-----cccHHHHHHHHhcCCCCcccccCccc
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK-----ELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
. ....|+......++.++|||||||++|||+||+.||+... .....++......... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~-------- 222 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-I-------- 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-C--------
Confidence 1 1122344444567889999999999999999999996311 1112223322222210 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCC------HHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPT------MNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt------m~ev~~ 647 (680)
..+.....++.+++.+|++.||++||+ ++++++
T Consensus 223 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 223 -RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred -CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 011122357889999999999999997 567654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=287.37 Aligned_cols=246 Identities=17% Similarity=0.289 Sum_probs=186.9
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----C
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----F 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~ 459 (680)
.+.||+|+||.||+|... ++..||||++...... ....+++.+|++++++++||||+++++++..... .
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS---SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC---hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 468999999999999863 4688999988654321 2345678999999999999999999999865431 1
Q ss_pred ceEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
..++++||+++|+|.+++... ....+++...++++.+++.||+|||+. +|+||||||+||++++++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887532 223589999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCC
Q 005734 536 CFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 536 Gla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
|+++......... ...++.......+.++||||||+++|||++ |+.||......++..++.. . ..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~---~-~~ 233 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK---G-NR 233 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc---C-Cc
Confidence 9998764221110 011222233456788999999999999999 8889875543333333221 1 11
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.. ........+.+++.+|++.+|++||++.++++.|+++
T Consensus 234 ~~---------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 LK---------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 0112336899999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=301.03 Aligned_cols=242 Identities=14% Similarity=0.157 Sum_probs=179.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .++..+|||++...... .......+.+|++++.+++|+|||++++++.+.+ ..++|||
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~--~~~lv~E 81 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL--NRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFVMD 81 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC--EEEEEEe
Confidence 37899999999999986 46889999998653211 1234567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
|+++|+|.+++... ..+++.....++.|++.||+|||.. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999998643 3588999999999999999999998 99999999999999999999999999976431000
Q ss_pred ------------------------------------------------------CcccccccCCCCCCCCCCCCeeehhH
Q 005734 546 ------------------------------------------------------KVSDDIENSVLPPLADPETNIYSFGI 571 (680)
Q Consensus 546 ------------------------------------------------------~~~~~~~~~~~~~~~s~~sDVySfGv 571 (680)
+.....|+......++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 00011122222345678899999999
Q ss_pred HHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHH--ccccCCCCCCCHHHHHHH
Q 005734 572 LMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKE--CIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 572 vllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~--C~~~~P~~RPtm~ev~~~ 648 (680)
++|||+||+.||.......... .......... + +... ....++.+++.+ |+..+|..||+++|++..
T Consensus 237 il~elltG~~Pf~~~~~~~~~~---~i~~~~~~~~--~-~~~~----~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQL---KVINWENTLH--I-PPQV----KLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHHH---HHHccccccC--C-CCCC----CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999999999997644222211 1111101000 0 0000 112466777776 667778889999999874
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=297.18 Aligned_cols=253 Identities=15% Similarity=0.210 Sum_probs=182.8
Q ss_pred hccccCCC--CCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 387 FSNIIDTQ--SGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 387 ~~~~iG~G--~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.++||+| +|++||++.. ++|+.||||++...... ....+.+.+|+++++.++|||||+++++|..++ ..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~--~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT---NEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc---HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC--EEEE
Confidence 34689999 6789999987 57899999998654321 233456778999999999999999999999887 7799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++.......+++..+.+++.|++.||+|||+. +|+||||||+|||++.++.++++||+.......
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~ 153 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIN 153 (327)
T ss_pred EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccc
Confidence 99999999999999655445689999999999999999999998 999999999999999999999999986543321
Q ss_pred CCC----------cc-----cccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHH-HHHHHHhcC----
Q 005734 544 KSK----------VS-----DDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKELSIE-KWAADYLNE---- 601 (680)
Q Consensus 544 ~~~----------~~-----~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~-~~~~~~~~~---- 601 (680)
... .. ...|+.... ..++.++|||||||++|||+||+.||......... .........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (327)
T cd08227 154 HGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 233 (327)
T ss_pred ccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccc
Confidence 100 00 112332221 24678899999999999999999999753321111 111000000
Q ss_pred ----CCCc-----ccccCccc------------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 602 ----PRNF-----SCMIDPSL------------------KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 602 ----~~~~-----~~~~d~~l------------------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.. ....+..+ .........++.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0000 00000000 0011223457889999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=269.58 Aligned_cols=242 Identities=18% Similarity=0.259 Sum_probs=194.5
Q ss_pred hhccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+..+.+|+|-||.||.|+.+ ++..||+|++.+.... ......++.+|+++-+.++||||++++||+.+.. ..||+
T Consensus 25 eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~--~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~--riyLi 100 (281)
T KOG0580|consen 25 EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQIL--KTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK--RIYLI 100 (281)
T ss_pred cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHH--HhcchhhhhheeEeecccCCccHHhhhhheeccc--eeEEE
Confidence 34599999999999999975 6788999998654321 2234567999999999999999999999999988 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||.++|++...|.+.....++...-..+..|+|.||.|+|.. +++||||||+|+|++.++..||+|||.+......
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~ 177 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN 177 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence 9999999999999877777788888899999999999999998 9999999999999999999999999998765421
Q ss_pred C--Cc----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 545 S--KV----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 545 ~--~~----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. +. ....|+...+...+...|+|++||+.+|++.|..||......+..+.+.+.- ..+| .
T Consensus 178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~--------~~~p------~ 243 (281)
T KOG0580|consen 178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD--------LKFP------S 243 (281)
T ss_pred CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc--------ccCC------c
Confidence 1 11 1223555556667888999999999999999999998654333333333211 1111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+.+++.+|+..+|.+|.+..||++.
T Consensus 244 ~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 244 TISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 223578899999999999999999999864
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=287.77 Aligned_cols=238 Identities=18% Similarity=0.337 Sum_probs=187.1
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||++...++..+|+|.+..... ...+|.+|++++++++|||++++++++.... ..++|+|
T Consensus 8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 79 (256)
T cd05112 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM------SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS--PICLVFE 79 (256)
T ss_pred EEeeecCcccceEEEEEEeCCCeEEEEECCCCCC------CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC--ceEEEEE
Confidence 4588999999999999987788899998764321 1346889999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.... ..++|..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 155 (256)
T cd05112 80 FMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155 (256)
T ss_pred cCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence 999999999986543 3589999999999999999999988 899999999999999999999999999876542211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+.......+.++||||||+++|||++ |+.||.........+.+.. . . ....+..
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~-~---~~~~~~~--- 225 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA---G-F---RLYKPRL--- 225 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC---C-C---CCCCCCC---
Confidence 1 1122343334566788999999999999998 9999975432222222211 1 0 0011111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
....+.+++.+||+.+|++||++.+|+++|
T Consensus 226 ---~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 226 ---ASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ---CCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 236799999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=288.71 Aligned_cols=239 Identities=16% Similarity=0.264 Sum_probs=181.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC----Cce
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP----FNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~----~~~ 461 (680)
.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.++.++ +|+||+++++++...+. ...
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG------DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC------ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 378999999999999974 67889999886432 1234678999999998 69999999999875431 247
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++||||+++|+|.+++.......++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 8999999999999999765556789999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCCcc--------cccccCCC-----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccc
Q 005734 542 LPKSKVS--------DDIENSVL-----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCM 608 (680)
Q Consensus 542 ~~~~~~~--------~~~~~~~~-----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (680)
....... ...|+... ...++.++|||||||++|||++|+.||............ ... .....
T Consensus 162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~---~~~--~~~~~ 236 (272)
T cd06637 162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRN--PAPRL 236 (272)
T ss_pred ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH---hcC--CCCCC
Confidence 4221110 11233221 234677899999999999999999999654322111111 111 01111
Q ss_pred cCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 609 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+ .....++.+++.+||..+|.+|||+.++++
T Consensus 237 ~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 237 KS-------KKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CC-------CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11 122357889999999999999999999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=296.03 Aligned_cols=235 Identities=19% Similarity=0.281 Sum_probs=195.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||||+-+ +.+.||+|.+.+.... ++..+...+|++++++++|||||.++.++.... +.++|.||
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~---~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~--~~~vVte~ 82 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN---EKELKNLRQEVRILRSLKHPNIVEMLESFETSA--HLWVVTEY 82 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCc---hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc--eEEEEehh
Confidence 78999999999999975 6789999988654322 345678999999999999999999999999888 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+.+ +|..+|... ..++......|+.++..||.|||+. +|.|||+||.|||++..+.+|++|||+|+.+..+...
T Consensus 83 a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~v 156 (808)
T KOG0597|consen 83 AVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSV 156 (808)
T ss_pred hhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccCcee
Confidence 966 999999644 3699999999999999999999999 9999999999999999999999999999998754433
Q ss_pred cc--------ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 SD--------DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~~--------~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.. +.|+......++..+|.||+||++||+++|++||.. .++.+.++....++... +..
T Consensus 157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a---~si~~Lv~~I~~d~v~~-----------p~~ 222 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA---RSITQLVKSILKDPVKP-----------PST 222 (808)
T ss_pred eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH---HHHHHHHHHHhcCCCCC-----------ccc
Confidence 22 223334455778889999999999999999999975 45666666666654322 123
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+..++.-.+.+||.+|.+-.+++..
T Consensus 223 ~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 223 ASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred ccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 34678899999999999999999888754
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=294.70 Aligned_cols=236 Identities=14% Similarity=0.205 Sum_probs=178.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHH---HcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL---SRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|... +|+.||||++...... .......+..|++++ ++++||||+++++++..++ ..++
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~--~~~l 79 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII--ARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED--HVCF 79 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC--EEEE
Confidence 468999999999999874 6899999998643211 122334566665554 5678999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|..+++. ..+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 80 v~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 80 VMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999988853 3689999999999999999999998 999999999999999999999999999875432
Q ss_pred CCCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.... ....|+......++.++|||||||++|||+||+.||......... ..........
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~---~~i~~~~~~~---------- 220 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF---DSIVNDEVRY---------- 220 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhCCCCC----------
Confidence 1111 111233333446688899999999999999999999765433222 2222211111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
+......+.+++.+|++.||++||+ +.++++
T Consensus 221 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 221 -PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 1112357889999999999999994 555554
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=299.92 Aligned_cols=241 Identities=14% Similarity=0.163 Sum_probs=183.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. ++..+|+|++..... ........+..|+++++.++||||+++++++.+++ ..++|||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~--~~~lv~E 123 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM--IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK--YLYMVME 123 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEEEEEc
Confidence 389999999999999975 688999999864221 11223455789999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++.. .++......++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 124 y~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 124 YMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM 197 (370)
T ss_pred CCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 99999999998643 477888889999999999999998 999999999999999999999999999987643211
Q ss_pred c----ccccccCCCC---------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 547 V----SDDIENSVLP---------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 547 ~----~~~~~~~~~~---------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
. ....+.+.+| ..++.++|||||||++|||+||+.||........ ............ .+..
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~~~~~---~~~~ 271 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT---YSKIMDHKNSLT---FPDD 271 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH---HHHHHcCCCcCC---CCCc
Confidence 1 1111222222 2467899999999999999999999976542222 222222211111 0100
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQ--RPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~--RPtm~ev~~~ 648 (680)
.....++.+++.+|++.+|++ ||+++|+++.
T Consensus 272 ----~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 272 ----IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ----CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 012367889999999999987 9999999764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=298.08 Aligned_cols=242 Identities=14% Similarity=0.176 Sum_probs=185.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+++.. +|+.||||++..... ......+.+.+|+++++.++|+||+++++++.+.+ ..++|||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL--LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD--NLYLVME 81 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--eEEEEEC
Confidence 478999999999999974 788999999875321 12334567889999999999999999999998876 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 82 YQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 99999999999654 24689999999999999999999998 999999999999999999999999999987643221
Q ss_pred cc---------cccccCCC------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 547 VS---------DDIENSVL------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 547 ~~---------~~~~~~~~------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
.. ...|+... ...++.++|||||||++|||+||+.||....... .............. +
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~~~~i~~~~~~~~~---~ 231 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK---TYNNIMNFQRFLKF---P 231 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH---HHHHHHcCCCccCC---C
Confidence 11 11222221 2345788999999999999999999997644222 22222221111100 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. .......+.+++..|+. +|++||+++++++.
T Consensus 232 ~----~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 232 E----DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred C----CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0 01123578899999998 99999999998853
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=295.43 Aligned_cols=235 Identities=14% Similarity=0.171 Sum_probs=179.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||.||+|+.. +|..||||+++..... .......+..|.+++... +||||+++++++.+.+ ..++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~E 76 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL--IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE--HLFFVME 76 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC--EEEEEEC
Confidence 46999999999999975 6889999998653211 112344567788888765 8999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
|+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 151 (316)
T cd05620 77 FLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN 151 (316)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC
Confidence 99999999998643 3689999999999999999999998 99999999999999999999999999987532111
Q ss_pred -------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 -------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 -------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
......|+......++.++|||||||++|||+||+.||.......+.+.+. ....... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~---~~~~~~~-----------~ 217 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR---VDTPHYP-----------R 217 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCCCCC-----------C
Confidence 111122444444567889999999999999999999997654332222221 1111111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMN-DII 646 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~-ev~ 646 (680)
....++.+++.+|++.||++||++. ++.
T Consensus 218 ~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1225788999999999999999984 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=284.39 Aligned_cols=241 Identities=18% Similarity=0.262 Sum_probs=185.1
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccch-hhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSK-DWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~-~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|...+|+.+|||.+..+... .........+.+|++++++++|+||++++++|.+.+ ..++|+||
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 83 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN--TISIFMEF 83 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC--eEEEEEec
Confidence 689999999999999888999999988754322 122334467899999999999999999999998876 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++.....++.+++.||+|||.. +|+|+||||+||++++++.++|+|||+++.......
T Consensus 84 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 84 VPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 9999999999643 3588999999999999999999988 899999999999999999999999999876431100
Q ss_pred -------------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 547 -------------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 547 -------------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
.....|+.......++++|||||||+++||+||+.||............. ...... +.
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~-----~~- 229 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG---AHRGLM-----PR- 229 (265)
T ss_pred ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhh---hccCCC-----CC-
Confidence 00112333333456788999999999999999999997543211111111 110000 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.....++.+++.+||+.+|++||++.++++
T Consensus 230 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 230 --LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11123367889999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=289.30 Aligned_cols=243 Identities=13% Similarity=0.137 Sum_probs=186.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||++... +++.+|||.+....... ....+.+.+|+.++++++|+|++++++.+.+.+ ..++|||
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--~~~lv~e 80 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGESMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLT 80 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc--hHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--EEEEEEE
Confidence 378999999999999875 78899999886443221 223456788999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 99999999998655555799999999999999999999988 999999999999999999999999999876542221
Q ss_pred c-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 V-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 ~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ....|+......++.++|||||||++|||++|+.||................... .. .....
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~---~~-------~~~~~ 227 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---QE-------EYSEK 227 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh---hh-------hcCcc
Confidence 1 1122344444567889999999999999999999997543211111111111110 00 01112
Q ss_pred HHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
...++.+++.+||+.||++||| ++|+++
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 2356889999999999999999 788876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=291.74 Aligned_cols=251 Identities=13% Similarity=0.187 Sum_probs=185.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +|..+|+|.+..... .....++.+|++++.+++||||++++++|.+++ ..++|+|
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 79 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK----PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG--EISICME 79 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--EEEEEee
Confidence 378999999999999975 678888888764321 234556889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++.. ..+++..+..++.++++||+|||+.+ +++||||||+||++++++.+||+|||++........
T Consensus 80 y~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (308)
T cd06615 80 HMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 155 (308)
T ss_pred ccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccccc
Confidence 99999999999643 46899999999999999999999732 899999999999999999999999999876542211
Q ss_pred c------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccc-------------
Q 005734 547 V------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC------------- 607 (680)
Q Consensus 547 ~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------- 607 (680)
. ....|+......++.++|||||||++|||+||+.||..........+.............
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (308)
T cd06615 156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPR 235 (308)
T ss_pred ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccc
Confidence 1 112234333445688899999999999999999998654322222222111100000000
Q ss_pred ----------ccCcccCCCC-HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 608 ----------MIDPSLKSFK-QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 608 ----------~~d~~l~~~~-~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.........+ .....++.+++.+|+..+|++||++++|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 236 PMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred hhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000 1123568899999999999999999999875
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=295.25 Aligned_cols=238 Identities=14% Similarity=0.194 Sum_probs=179.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHH-HHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVD-TLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+++.. +|+.+|||++...... .......+..|.. +++.++||||+++++++..++ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~--~~~lv~e 76 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL--NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE--KLYFVLD 76 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC--EEEEEEc
Confidence 36899999999999864 7899999998654211 1223345666655 467789999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|..++... ..+++.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 151 (325)
T cd05604 77 FVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD 151 (325)
T ss_pred CCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC
Confidence 99999999888533 4689999999999999999999998 999999999999999999999999999875432111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||++|+.||...... +........... +.+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~~~~~~~~~----~~~------- 217 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA---EMYDNILHKPLV----LRP------- 217 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH---HHHHHHHcCCcc----CCC-------
Confidence 1 112234334455688999999999999999999999764322 222222222111 111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
.....+.+++.+|++.+|.+||++++.++++
T Consensus 218 ~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 218 GASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred CCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 1225678999999999999999987544443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=293.73 Aligned_cols=239 Identities=15% Similarity=0.190 Sum_probs=178.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHH-HHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQV-DTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~-~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+++.. +++.+|+|++...... .......+..|. .+++.++|+||+++++++...+ ..++|||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~--~~~lv~e 76 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL--KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVLD 76 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH--hhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC--eEEEEEe
Confidence 36899999999999975 6788999998643211 112233444444 4567889999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..++......++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~ 151 (325)
T cd05602 77 YINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG 151 (325)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC
Confidence 99999999998643 3577888888999999999999998 999999999999999999999999999876432111
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||++|+.||.........+ .....+.. +.+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~---~i~~~~~~----~~~------- 217 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD---NILNKPLQ----LKP------- 217 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH---HHHhCCcC----CCC-------
Confidence 1 1122333344567889999999999999999999997644332222 22222111 111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
.....+.+++.+|++.+|.+||++.+.+.++.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~ 249 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 249 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCHHHHh
Confidence 12257889999999999999999875544433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=296.18 Aligned_cols=232 Identities=11% Similarity=0.105 Sum_probs=179.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|... ++..||||++...... .......+..|..++..+ +|++|+++++++.+.+ ..++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~ 80 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI--QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD--RLYFVM 80 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC--EEEEEE
Confidence 478999999999999875 5789999988653211 122345577788888877 5899999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999999998643 3689999999999999999999998 99999999999999999999999999987643211
Q ss_pred C--------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 K--------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~--------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. .....|+......++.++|||||||++|||+||+.||.......+...+ ...... .+
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i---~~~~~~-----------~p 221 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI---MEHNVA-----------YP 221 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCC-----------CC
Confidence 1 1112244444456788999999999999999999999865433333222 221111 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
.....++.+++.+|++.+|++|++.
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1223578899999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=290.18 Aligned_cols=236 Identities=18% Similarity=0.298 Sum_probs=184.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|.||+|.. .++..+++|.+...... ....+.+|++++++++|+||+++++++..+. ..++||||
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-----~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~--~~~lv~e~ 98 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEY 98 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEeecc
Confidence 6899999999999986 47889999988654422 2456889999999999999999999998776 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred cCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 999999999853 2579999999999999999999998 9999999999999999999999999998765432111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+.......++++|||||||++|||+||+.||....... .+.. ....... .+ ..+..
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~~~~-~~~~~~~-------~~-~~~~~ 241 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYL-IATNGTP-------EL-QNPEK 241 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--hHHH-HhcCCCC-------CC-CCccc
Confidence 1112343344556889999999999999999999997543211 1111 1111000 00 01122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.+++.+||..+|++||++.|+++.
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred cCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 33568899999999999999999999973
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=287.79 Aligned_cols=235 Identities=17% Similarity=0.259 Sum_probs=184.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... ++..||+|.+..... ......+.+|++++++++||||+++++++..++ ..++|+||
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT--KLWIIMEY 83 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc----hHHHHHHHHHHHHHHcCCCCccHhhhcccccCC--ceEEEEEc
Confidence 67999999999999874 578899998764331 223467899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++.. ..+++..+..++.++++|++|||+. +++|+||||+||++++++.++++|||+++........
T Consensus 84 ~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 84 LGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred cCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcchh
Confidence 999999999853 3589999999999999999999998 9999999999999999999999999999775432111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+......++.++|||||||+++||+||+.|+....+......+ .... .+ .....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~----~~~~------~~---~~~~~ 224 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI----PKNS------PP---TLEGQ 224 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh----hcCC------CC---CCCcc
Confidence 112234444455688999999999999999999998654322222111 1100 11 11122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.+++.+||+.+|++||+|.+|++.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 34678899999999999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=283.71 Aligned_cols=239 Identities=16% Similarity=0.222 Sum_probs=187.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... ++..+|+|.+..... ....+.+.+|++++++++|+||+++.+++.+.+ ..++|||
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 78 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS----SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG--HLYIVME 78 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc----hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC--EEEEEEe
Confidence 478999999999999874 688899998764331 223457889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.......++....+.++.+++.||+|||+. +|+|+||||+||++++++.++++|||+++.......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 99999999998755556789999999999999999999998 999999999999999999999999999876643221
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+.......++++||||||++++||++|+.||...... .......... .. ..+.
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---~~~~~~~~~~--~~--------~~~~ 222 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK---NLILKVCQGS--YK--------PLPS 222 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH---HHHHHHhcCC--CC--------CCCc
Confidence 11 11233333345688999999999999999999999754322 2222221111 11 0111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+.+++.+||+.+|++||++.+++.+
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 223568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=282.03 Aligned_cols=240 Identities=13% Similarity=0.204 Sum_probs=188.6
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||.++. .++..+++|.+...... ....+++.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~~~e 79 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS---EKERRDALNEIVILSLLQHPNIIAYYNHFMDDN--TLLIEME 79 (256)
T ss_pred eeEecccCCceEEEEEEcCCCcEEEEEEEeecccc---hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC--eEEEEEE
Confidence 37899999999998886 46888999988654322 234567899999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.......+++.++..++.++++||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999999765456789999999999999999999998 999999999999999999999999999987643321
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+.......+.++||||||++++||++|+.||..... .+........ .... ...
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---~~~~~~~~~~--~~~~--------~~~ 223 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP---LNLVVKIVQG--NYTP--------VVS 223 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHcC--CCCC--------Ccc
Confidence 10 1113333333467889999999999999999999975432 2222222221 1111 112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+||..+|++||+++++++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 224 VYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 233678899999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=298.78 Aligned_cols=241 Identities=17% Similarity=0.210 Sum_probs=177.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||++... +++.+|||++..... ........+..|++++.+++|+||+++++++.+.. ..++||||
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~--~~~lv~E~ 82 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM--LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL--NLYLIMEF 82 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC--eEEEEEcC
Confidence 78999999999999864 688999999864321 11234457889999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 83 ~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 83 LPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 9999999999643 4689999999999999999999998 999999999999999999999999999875431100
Q ss_pred ------------------------------------------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCC
Q 005734 547 ------------------------------------------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 547 ------------------------------------------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~ 584 (680)
.....|+......++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 00111222233456788999999999999999999997
Q ss_pred ccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHH--ccccCCCCCCCHHHHHHH
Q 005734 585 EEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKE--CIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~--C~~~~P~~RPtm~ev~~~ 648 (680)
+.........+ ....... .+.+.. .. ..++.+++.+ |...++..||+++||++.
T Consensus 238 ~~~~~~~~~~i---~~~~~~~--~~p~~~-~~----s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 238 SETPQETYKKV---MNWKETL--IFPPEV-PI----SEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCHHHHHHHH---HcCcCcc--cCCCcC-CC----CHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 65433222222 1110110 011111 11 1345566655 333445567999999875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=292.79 Aligned_cols=232 Identities=12% Similarity=0.118 Sum_probs=177.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC-cccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|+.. +++.||||++...... .......+..|.+++..++|+ +|+++++++.+.+ ..++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~lv~ 80 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII--QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVM 80 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC--EEEEEE
Confidence 478999999999999975 5788999998643211 123455688899999999765 5888888888776 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 999999999998643 3689999999999999999999998 99999999999999999999999999987532111
Q ss_pred C--------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 K--------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~--------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. .....|+......++.++|||||||++|||+||+.||...........+ ......+.
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i---~~~~~~~~----------- 221 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSI---MEHNVSYP----------- 221 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH---HcCCCCCC-----------
Confidence 1 1112234444445688999999999999999999999765433332222 22111111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
.....++.+++.+|++.+|++|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1122578899999999999999986
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=283.84 Aligned_cols=242 Identities=15% Similarity=0.229 Sum_probs=181.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|..+++|++...............+.+|++++++++|+||+++++++.+......++++|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e 86 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFME 86 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEe
Confidence 379999999999999874 6889999988654322222344567899999999999999999999987643335689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 87 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 87 YMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999999999643 3589999999999999999999988 999999999999999999999999999876532110
Q ss_pred c-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 V-----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ~-----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
. ....|+......++.++|||||||++|||+||+.||..... .+.+........ .+.
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---~~~~~~~~~~~~------~~~--- 229 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---MAAIFKIATQPT------NPQ--- 229 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---HHHHHHHhcCCC------CCC---
Confidence 0 01123333344567889999999999999999999975421 122222211110 111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+......+.+++ +||..+|++||+|+||++
T Consensus 230 ~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 230 LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 1122224556666 788899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=311.09 Aligned_cols=242 Identities=14% Similarity=0.220 Sum_probs=186.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC------Cc
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP------FN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~ 460 (680)
.+.||+|+||+||+++. .+|+.||||++..... .......+.+|+..+..++|+|++++...+...+. ..
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~ 113 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM---SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLM 113 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceE
Confidence 38999999999999986 5789999999865432 13345678899999999999999999887654321 12
Q ss_pred eEEEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
.++||||+++|+|.++++.. ....+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecccC
Confidence 57999999999999999643 235689999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCC----------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccc
Q 005734 539 TIALPKSK----------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCM 608 (680)
Q Consensus 539 ~~~~~~~~----------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (680)
+....... .....|+......++.++|||||||++|||+||+.||.... ..+.+........ .
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~---~~~~~~~~~~~~~--~-- 263 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN---MEEVMHKTLAGRY--D-- 263 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHhcCCC--C--
Confidence 87542211 01122333344557889999999999999999999997643 2233333222110 0
Q ss_pred cCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 609 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.....++.+++.+||+.+|++||++.++++.
T Consensus 264 ------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 264 ------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1112233678999999999999999999999864
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=294.42 Aligned_cols=241 Identities=14% Similarity=0.169 Sum_probs=180.6
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+++. .+|..||+|++....... .....+.+..|++++.++ +|+||+++++++...+ ..+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~~~ 81 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ-KAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA--KLH 81 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh-hhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--EEE
Confidence 37899999999999875 368899999886432111 122345688999999999 4999999999988776 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++..+ ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 82 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 82 LILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 999999999999998643 3689999999999999999999998 99999999999999999999999999998653
Q ss_pred CCCCcc---------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH-HHHhcCCCCcccccCc
Q 005734 543 PKSKVS---------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA-ADYLNEPRNFSCMIDP 611 (680)
Q Consensus 543 ~~~~~~---------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ 611 (680)
...... ...|+.... ...+.++|||||||++|||+||+.||...........+ .........+
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~------ 230 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF------ 230 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC------
Confidence 221110 112232222 23577899999999999999999999743322222222 2222211111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
+......+.+++.+|++.||++|| +++++++
T Consensus 231 -----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 231 -----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred -----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 111235688999999999999999 6667765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=284.20 Aligned_cols=237 Identities=17% Similarity=0.206 Sum_probs=181.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||+|+||.||+|... ++..+++|.+.... ......|.+|++++++++||||+++++++..++ ..++|+||
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~~v~e~ 83 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-----EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--NLWILIEF 83 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-----HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC--EEEEEEEe
Confidence 67999999999999975 57778888875433 233567899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|..++... ...++|..+..++.++++||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 84 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (282)
T cd06643 84 CAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR 159 (282)
T ss_pred cCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccc
Confidence 9999999988643 24689999999999999999999998 9999999999999999999999999998765322111
Q ss_pred --------ccccccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 548 --------SDDIENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 548 --------~~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....|+.. ....++.++|||||||++|||++|+.||........ +......... ...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~~~~~~~~~--~~~----- 229 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV---LLKIAKSEPP--TLA----- 229 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH---HHHHhhcCCC--CCC-----
Confidence 01112221 123356789999999999999999999875432221 1111111000 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.....++.+++.+||+.+|++||++.++++
T Consensus 230 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 230 -QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred -CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11122367899999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-33 Score=281.36 Aligned_cols=241 Identities=16% Similarity=0.256 Sum_probs=187.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|... ++..|++|.+.........++..+.+.+|++++++++|+||+++++++..+. ..++|+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e 82 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED--NLYIFLE 82 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC--eEEEEEE
Confidence 368999999999999986 7899999988765433333445678999999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 83 LVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred ecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence 99999999999643 3589999999999999999999998 999999999999999999999999999876543221
Q ss_pred cc-------cccccCCCCCC-CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS-------DDIENSVLPPL-ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~-------~~~~~~~~~~~-~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+...... .+.++||||||++++||++|+.||....... ........ .... ..+.
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~-~~~~--------~~~~ 225 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA---AVFKIGRS-KELP--------PIPD 225 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH---HHHHHHhc-ccCC--------CcCC
Confidence 10 11233222233 6788999999999999999999997543211 11111110 0011 1111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+||+.+|++||++.+++.
T Consensus 226 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 226 HLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 22367889999999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=298.99 Aligned_cols=240 Identities=15% Similarity=0.172 Sum_probs=179.5
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||++.. .+|+.||||++.... .........+.+|++++.+++|||||++++++.+++ ..++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~--~~~lv~E~ 82 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE--MFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ--YLYLIMEF 82 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--HHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--eeEEEEeC
Confidence 7899999999999986 478999999885432 112334567889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 83 LPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 9999999998643 4688999999999999999999998 99999999999999999999999999996432100
Q ss_pred -----------------------------------------------------CcccccccCCCCCCCCCCCCeeehhHH
Q 005734 546 -----------------------------------------------------KVSDDIENSVLPPLADPETNIYSFGIL 572 (680)
Q Consensus 546 -----------------------------------------------------~~~~~~~~~~~~~~~s~~sDVySfGvv 572 (680)
+.....|+......++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 000111222223456888999999999
Q ss_pred HHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHHH
Q 005734 573 MLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQR---PTMNDIIVQ 648 (680)
Q Consensus 573 llElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~R---Ptm~ev~~~ 648 (680)
+|||+||+.||......+... ........+. -+... ....++.+++.+|+. +|.+| +++.|+++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~---~i~~~~~~~~---~p~~~----~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYR---KIINWRETLY---FPDDI----HLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHH---HHHccCCccC---CCCCC----CCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999999997654322222 1111111110 01100 122568899999997 66665 599998875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=291.55 Aligned_cols=249 Identities=15% Similarity=0.224 Sum_probs=180.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++...... .....+.+|++++++++||||+++++++.+.. ..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 83 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE----GTPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTLVFE 83 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEecccccc----ccchhHHHHHHHHhhCCCCCcCeEEEEEecCC--eEEEEEE
Confidence 378999999999999975 7889999998654321 12345778999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++ ++|.+++... ...+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 84 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 158 (303)
T cd07869 84 YVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH 158 (303)
T ss_pred CCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence 995 6888888643 34688999999999999999999998 999999999999999999999999999875432111
Q ss_pred c-c-------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCC--ccc-----cc
Q 005734 547 V-S-------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRN--FSC-----MI 609 (680)
Q Consensus 547 ~-~-------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~--~~~-----~~ 609 (680)
. . ...|+... ...++.++||||+||++|||+||+.||.+..+ ....+.+......+.. ... ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T cd07869 159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHF 238 (303)
T ss_pred cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccc
Confidence 1 0 11122221 12457789999999999999999999975432 1111222111111100 000 00
Q ss_pred Ccc-cCCC-C---------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPS-LKSF-K---------QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~-l~~~-~---------~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
++. .... + ......+.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 239 KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000 0000 0 011246789999999999999999999985
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=285.80 Aligned_cols=240 Identities=17% Similarity=0.200 Sum_probs=182.1
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
...||+|+||.||+|+. .+|+.||+|++..... .....+.+|+.++.+++||||+++++++...+ ..++|+|
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~--~~~iv~e 86 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE--KLWICME 86 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--EEEEEEe
Confidence 37899999999999996 5788999998865432 22346789999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++.. ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 87 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 87 YCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 99999999998643 3689999999999999999999998 999999999999999999999999999986542211
Q ss_pred c--------ccccccCCC---CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 V--------SDDIENSVL---PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ~--------~~~~~~~~~---~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
. ....|+... ....+.++|||||||+++||+||+.||....+..... .. .. ... ..+...
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~---~~-~~-~~~---~~~~~~- 232 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LM-SK-SNF---QPPKLK- 232 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe---ee-ec-CCC---CCCCCc-
Confidence 0 011122221 2235678999999999999999999986432111100 00 00 000 001111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
........+.+++.+||+.+|++||+++++++.
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred cccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 011233678899999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=317.95 Aligned_cols=251 Identities=15% Similarity=0.190 Sum_probs=189.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... +|+.||||++...... .+...++|.+|++++++++|||||++++++.+++ ..++||||
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~--~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~--~lyLVMEY 83 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSE--NPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD--PVYYTMPY 83 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECccccc--CHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC--EEEEEEEc
Confidence 78999999999999975 6899999998643221 1334567999999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 468 APNGTVFEHLHIK---------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 468 ~~~GsL~~~l~~~---------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
+++|+|.+++... ....+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999998631 123567889999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCC--------------------------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHH
Q 005734 539 TIALPKS--------------------------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIE 592 (680)
Q Consensus 539 ~~~~~~~--------------------------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~ 592 (680)
+...... +.....|+......++.++|||||||+++||+||+.||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 8762100 00011123333345688899999999999999999999753322111
Q ss_pred HHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhccCC
Q 005734 593 KWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP-TMNDIIVQLRQVINISP 657 (680)
Q Consensus 593 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP-tm~ev~~~L~~i~~~~~ 657 (680)
. ......+... ....+.+..+.+++.+|++.||++|| +++++.+.|+......+
T Consensus 241 ~--~~~i~~P~~~---------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p 295 (932)
T PRK13184 241 Y--RDVILSPIEV---------APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSP 295 (932)
T ss_pred h--hhhccChhhc---------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCc
Confidence 1 1111111000 00112335688999999999999996 58888888888765443
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=291.92 Aligned_cols=235 Identities=14% Similarity=0.166 Sum_probs=179.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||.||++... +++.+|||++...... .......+.+|+.++.++ +|+||+++++++.+.+ ..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e 76 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH--DDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS--RLFLVIE 76 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC--EEEEEEe
Confidence 46999999999999975 6788999998754321 123455688999999888 6999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 77 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 151 (327)
T cd05617 77 YVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD 151 (327)
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC
Confidence 99999999888533 3699999999999999999999998 999999999999999999999999999875332111
Q ss_pred --------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc---cccHHHHHHHHhcC-CCCcccccCcccC
Q 005734 547 --------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK---ELSIEKWAADYLNE-PRNFSCMIDPSLK 614 (680)
Q Consensus 547 --------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~---~~~~~~~~~~~~~~-~~~~~~~~d~~l~ 614 (680)
.....|+......++.++|||||||++|||+||+.||.... .....+++...... +..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 222 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI--------- 222 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC---------
Confidence 11122444445567889999999999999999999996321 11222222222221 1111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMN 643 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ 643 (680)
+......+.+++.+|++.||++||++.
T Consensus 223 --p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 223 --PRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred --CCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 111225678999999999999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=285.27 Aligned_cols=243 Identities=14% Similarity=0.216 Sum_probs=185.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +|..+|+|.+..... ......+.+|++++.+++|+||+++++++...+ ..++|+|
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 79 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD----ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG--AVYMCME 79 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC----HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC--eEEEEEe
Confidence 478999999999999985 789999998864321 233467899999999999999999999998876 6799999
Q ss_pred ecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|+++++|.+++.... ...+++..+..++.+++.||.|||+.+ +|+||||||+||+++.++.+||+|||+++......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 999999999986432 346899999999999999999999632 89999999999999999999999999987653221
Q ss_pred Ccc------cccccCC------CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 546 KVS------DDIENSV------LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 546 ~~~------~~~~~~~------~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
... ...|+.. ....++.++|||||||++|||+||+.||................... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------~ 227 (286)
T cd06622 158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD----------P 227 (286)
T ss_pred cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC----------C
Confidence 111 1112222 11234788999999999999999999997543222222222222110 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+.....++.+++.+|++.+|++||++++++..
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 228 PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 11122344678899999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=282.86 Aligned_cols=248 Identities=15% Similarity=0.253 Sum_probs=187.7
Q ss_pred ccccCCCCCCeEEEEEeCC--CCEEEEEEeeeccchh-----hHHHHHHHHHHHHHHHHc-CCCCcccceeeEEecCCCC
Q 005734 388 SNIIDTQSGCTIYKGTLSS--GVEIAVAATAITSSKD-----WLKSQEMAYRKQVDTLSR-INHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~--g~~vaVK~~~~~~~~~-----~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~ 459 (680)
.+.||+|+||.||+|.... +..+|||.+....... .......++.+|++++.+ ++||||+++++++.+++
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~-- 82 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND-- 82 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC--
Confidence 4789999999999999864 6889999876433211 112344567889998875 79999999999998877
Q ss_pred ceEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGl 537 (680)
..++||||+++++|.+++.. .....+++..+++++.+++.||.|||+.. +++||||||+||++++++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 83 RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecccc
Confidence 77999999999999998853 23456899999999999999999999631 799999999999999999999999999
Q ss_pred ccccCCCCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 538 TTIALPKSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 538 a~~~~~~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
+......... ....|+......++.++||||||+++|||++|+.||.......... ...... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~---~~~~~~--~~~~~- 234 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLAT---KIVEAV--YEPLP- 234 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHH---HHhhcc--CCcCC-
Confidence 9875533211 1122344444557889999999999999999999997543222222 211110 00000
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.......+.+++.+||+.+|++||++.||..++++
T Consensus 235 ------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 235 ------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred ------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 01123578899999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=294.30 Aligned_cols=234 Identities=11% Similarity=0.126 Sum_probs=179.4
Q ss_pred hhccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~l 463 (680)
++.+.||+|+||+||++... +|+.||+|++...... .......+..|.+++..+. |++|+++.+++.+.+ ..++
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--~~~l 78 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI--QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD--RLYF 78 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC--EEEE
Confidence 45689999999999999874 6889999988643211 1233456788999998886 567888888888776 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ..+++.++..|+.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 79 v~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 79 VMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred EEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999999998643 3689999999999999999999998 999999999999999999999999999876432
Q ss_pred CCC--------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSK--------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~--------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
... .....|+......++.++|||||||++|||+||+.||.........+.+ .......
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i---~~~~~~~---------- 220 (323)
T cd05615 154 DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI---MEHNVSY---------- 220 (323)
T ss_pred CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCCC----------
Confidence 111 1112234333455788999999999999999999999865433332222 2221111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+++.+|++.+|++|++.
T Consensus 221 -p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 221 -PKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -CccCCHHHHHHHHHHcccCHhhCCCC
Confidence 11122577899999999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=269.52 Aligned_cols=229 Identities=18% Similarity=0.274 Sum_probs=187.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
-..||.|+||.|...+.+ +|..+|.|++...... ..++.....+|..+|+.+.||.++++++.|.+.. ..++|||
T Consensus 49 ~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vV--klKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~--~lymvme 124 (355)
T KOG0616|consen 49 LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVV--KLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS--NLYMVME 124 (355)
T ss_pred eeeeccCccceEEEEEEccCCceeehhhcCHHHHH--HHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC--eEEEEEe
Confidence 378999999999999975 6888999998765432 2345667889999999999999999999999888 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|.|..+++.. .+++.+...-+|.+|+.||+|||+. .|++|||||+|||+|.+|.+||+|||+|+.......
T Consensus 125 yv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~ 199 (355)
T KOG0616|consen 125 YVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW 199 (355)
T ss_pred ccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence 99999999999743 3689999999999999999999999 999999999999999999999999999999887765
Q ss_pred cccccccCCCCCC-----CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 VSDDIENSVLPPL-----ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 ~~~~~~~~~~~~~-----~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
+-...|+|.+|+. +...+|-|||||++|||+.|..||....+..+.+ +.+...-.+...+.
T Consensus 200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~---KI~~~~v~fP~~fs----------- 265 (355)
T KOG0616|consen 200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYE---KILEGKVKFPSYFS----------- 265 (355)
T ss_pred EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHH---HHHhCcccCCcccC-----------
Confidence 5556677776654 4566999999999999999999998766544333 33333222222222
Q ss_pred HHHHHHHHHccccCCCCC
Q 005734 622 EAICEVIKECIKTDLRQR 639 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~R 639 (680)
.++.+|+...++.|-.+|
T Consensus 266 ~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 266 SDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHHHHHHHHHHhhhhHhh
Confidence 467788888888888877
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=283.03 Aligned_cols=240 Identities=19% Similarity=0.296 Sum_probs=185.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchh----hHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKD----WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~----~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
...||+|++|.||+|... ++..+|+|.+....... ......+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 82 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD--HLN 82 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC--ccE
Confidence 468999999999999864 67899999886543221 12234467899999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+|+||+++++|.+++... ..+++..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 83 IFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 999999999999999643 4689999999999999999999988 99999999999999999999999999988765
Q ss_pred CCCCc--------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccc
Q 005734 543 PKSKV--------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCM 608 (680)
Q Consensus 543 ~~~~~--------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (680)
..... ....|+.......+.++||||||+++|||+||+.||.+...... +......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~------- 227 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA---IFKIGEN------- 227 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH---HHHHhcc-------
Confidence 22110 01123333334567889999999999999999999976432111 1111111
Q ss_pred cCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 609 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+ ..+......+.+++.+||+.+|++||++.+|++
T Consensus 228 ~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 ASP---EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCC---cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 001 111223367889999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=280.16 Aligned_cols=260 Identities=15% Similarity=0.194 Sum_probs=192.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC---CCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD---EPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~---~~~~~~lV 464 (680)
+.||+|+||.|.+++. .+|..||||++..... .....++-.+|+++|+.++|+||+.+......+ .-...|+|
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~---~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV 104 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE---NQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLV 104 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEeehhhhhhhhh---chHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEe
Confidence 6799999999999997 4789999998862221 123456788999999999999999999988652 22267999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+|+| .-+|.+.++.+ +.|+-....-+.+|+.+||.|+|+. +|+||||||+|+|++.+...||+|||+|+.....
T Consensus 105 ~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 105 FELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred hhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeecccc
Confidence 9999 55999999643 3588889999999999999999999 9999999999999999999999999999998643
Q ss_pred CCcccccccCC------C------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccC
Q 005734 545 SKVSDDIENSV------L------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMID 610 (680)
Q Consensus 545 ~~~~~~~~~~~------~------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d 610 (680)
.......+|. + ...++...||||.|||+.||++|+.-|.+.+..+..+.+...+..+.. +..+-.
T Consensus 179 -~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 179 -FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred -CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 1111111221 1 235688899999999999999999999876655555555554443311 000000
Q ss_pred -------cccC--------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhccCCC
Q 005734 611 -------PSLK--------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVINISPE 658 (680)
Q Consensus 611 -------~~l~--------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~~~~~ 658 (680)
.++. ..-........+|..+++..||.+|+|++|.++. |...-+...+
T Consensus 258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dE 322 (359)
T KOG0660|consen 258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDE 322 (359)
T ss_pred HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccC
Confidence 0000 0011233578899999999999999999999875 4444433333
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=281.35 Aligned_cols=239 Identities=15% Similarity=0.234 Sum_probs=189.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. +|+.+++|.+...... ....+++.+|++++++++|+||+++++++.+.+ ..++|+|
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS---PKEREESRKEVAVLSNMKHPNIVQYQESFEENG--NLYIVMD 79 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC---hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC--eEEEEEe
Confidence 478999999999999864 6889999988653321 234567899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++.......+++.++++++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 99999999999765555689999999999999999999998 999999999999999999999999999976643211
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+.......+.++|||||||+++||+||+.||..... .+.+........ . ..+.
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---~~~~~~~~~~~~--~--------~~~~ 223 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM---KNLVLKIIRGSY--P--------PVSS 223 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH---HHHHHHHhcCCC--C--------CCcc
Confidence 1 11223444445667889999999999999999999975432 223333222211 0 0112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+||+.+|++||+|.+|++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 22367899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=280.54 Aligned_cols=236 Identities=19% Similarity=0.282 Sum_probs=184.8
Q ss_pred ccccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|...+ +..+++|.+.... ...++.+|++++++++|+||+++++++.+.. ..++++|
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~e 78 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-------DLQEIIKEISILKQCDSPYIVKYYGSYFKNT--DLWIVME 78 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--cEEEEEe
Confidence 4789999999999999864 7889999875432 1567999999999999999999999999876 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ...++|..+..++.+++.||+|||+. +++||||+|+||++++++.+||+|||++........
T Consensus 79 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 79 YCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred cCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 99999999998643 35789999999999999999999998 999999999999999999999999999887653221
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||+||+.||....+......+ .... .+.+ ..+.
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~---~~~~-------~~~~-~~~~ 223 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI---PNKP-------PPTL-SDPE 223 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh---ccCC-------CCCC-Cchh
Confidence 1 111233333446688999999999999999999999754322111110 0000 0000 1112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+||+.+|++|||+.||++
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 23357899999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=315.85 Aligned_cols=255 Identities=21% Similarity=0.340 Sum_probs=203.3
Q ss_pred HHHHHHHhhhhccccCCCCCCeEEEEEeC----C----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCccc
Q 005734 377 RLELDTACEDFSNIIDTQSGCTIYKGTLS----S----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFV 447 (680)
Q Consensus 377 ~~~l~~~~~~~~~~iG~G~~g~Vyk~~~~----~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv 447 (680)
.+|+......+.+.+|.|.||.|++|... . ...||||.++.... ..+.+.+..|+++|+.+ +|+|||
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~----~~~~~~~~~El~~m~~~g~H~niv 365 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS----SSEKKDLMSELNVLKELGKHPNIV 365 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC----cHHHHHHHHHHHHHHHhcCCcchh
Confidence 45555555556679999999999999853 1 45789998865442 34567899999999999 599999
Q ss_pred ceeeEEecCCCCceEEEEEecCCCChhhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 005734 448 NLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE------M--------DHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513 (680)
Q Consensus 448 ~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~------~--------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~iv 513 (680)
.++|+|...+ ..++|.||++.|+|.++|+.++ . ..++-.+.+.++.|||.|++||++. ++|
T Consensus 366 ~llG~~t~~~--~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~v 440 (609)
T KOG0200|consen 366 NLLGACTQDG--PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCV 440 (609)
T ss_pred hheeeeccCC--ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Ccc
Confidence 9999999866 5699999999999999997544 1 2388999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCCeEEcccccccccCCCCCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCC
Q 005734 514 HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKL 581 (680)
Q Consensus 514 HrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~ 581 (680)
||||..+|||+.++..+||+|||+|+.......+ ....++......++.|+|||||||+|||++| |..
T Consensus 441 HRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 441 HRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred chhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 9999999999999999999999999965432211 1223455555788999999999999999999 999
Q ss_pred CCCccc-cccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 582 PYCEEK-ELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 582 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
||.+.. ..++.++++...+. +.+..+..++.++|+.||+.+|++||++.++++.++...
T Consensus 521 PYp~~~~~~~l~~~l~~G~r~-------------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 521 PYPGIPPTEELLEFLKEGNRM-------------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCcHHHHHHHHhcCCCC-------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 997632 23343333332221 123345578999999999999999999999999999864
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=279.99 Aligned_cols=241 Identities=14% Similarity=0.243 Sum_probs=186.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+++.. +++.+++|++...... ....+.+.+|++++++++|+|++++++.+...+. ..++|||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-~~~lv~e 80 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS---RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDG-LLYIVMG 80 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC---HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCC-EEEEEec
Confidence 478999999999999975 5788999988653321 2335568899999999999999999988764432 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++.......+++.++.+++.+++.|++|||+. +|+||||||+||+++.++.++|+|||+++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999999999765556789999999999999999999998 999999999999999999999999999987642211
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+.......+.++||||||++++||+||+.||..... .......... ... ..+.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~---~~~~~~~~~~--~~~--------~~~~ 224 (257)
T cd08223 158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM---NSLVYRIIEG--KLP--------PMPK 224 (257)
T ss_pred ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHhc--CCC--------CCcc
Confidence 1 11224444445567889999999999999999999975432 2222222211 110 1112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.+|++||++.+++++
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 233678999999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=295.45 Aligned_cols=241 Identities=14% Similarity=0.165 Sum_probs=180.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. +++.+|+|++..... ........+.+|+++++.++||||+++++++.+++ ..++|||
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~--~~~lv~E 123 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK--YLYMVME 123 (370)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEc
Confidence 389999999999999975 678899998864221 11223456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... .++......++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 124 y~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 124 YMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred CCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 99999999998643 478889999999999999999998 999999999999999999999999999987643211
Q ss_pred c----ccccccCCCC---------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 547 V----SDDIENSVLP---------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 547 ~----~~~~~~~~~~---------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
. ....+.+.+| ..++.++||||+||++|||+||+.||...... ............+. + +.
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~---~~~~~i~~~~~~~~--~-p~- 270 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV---GTYSKIMDHKNSLN--F-PE- 270 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCcccC--C-CC-
Confidence 1 1111222222 23678999999999999999999999764322 22222222111111 0 00
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQ--RPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~--RPtm~ev~~~ 648 (680)
.......+.+++..|+..++.+ ||++.|+++.
T Consensus 271 ---~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 271 ---DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ---cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0112356778888999755543 8899999876
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=282.75 Aligned_cols=241 Identities=16% Similarity=0.320 Sum_probs=184.8
Q ss_pred cccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
..||+|+||.||+|+.. +...|++|.+..... .....+|.+|++++++++|+||+++++++.+.. ..+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 84 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD----ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--PHY 84 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc----hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC--cce
Confidence 78999999999999964 346788887754321 224567999999999999999999999998776 569
Q ss_pred EEEEecCCCChhhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 463 MVFEYAPNGTVFEHLHIKEM-------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~-------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
+||||+++|+|.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999975431 2689999999999999999999988 9999999999999999999999999
Q ss_pred ccccccCCCCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 536 CFTTIALPKSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 536 Gla~~~~~~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
|+++......... ...|+.......++++||||||++++||++ |..||............. .. ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~---~~--~~ 236 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ---AG--KL 236 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH---cC--Cc
Confidence 9987543211100 122333333456788999999999999999 888886543222222211 11 01
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
... .....+..+.+++.+|++.+|++||++.|++..|.
T Consensus 237 ~~~-------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 237 ELP-------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCC-------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 100 01123367899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=285.23 Aligned_cols=244 Identities=15% Similarity=0.228 Sum_probs=188.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||++... +|..+|+|++..... ....+.|.+|+++++.++||||+++++++...+ ..++|||
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 83 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK----SSVRKQILRELQIMHECRSPYIVSFYGAFLNEN--NICMCME 83 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc----chHHHHHHHHHHHHHHcCCCCcceEeeeEecCC--EEEEEEe
Confidence 478999999999999974 688999998765431 234567899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++.....++.+++.||.|||+.. +++||||||+||++++++.++|+|||++........
T Consensus 84 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~ 159 (284)
T cd06620 84 FMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159 (284)
T ss_pred cCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence 99999999998643 36899999999999999999999732 799999999999999999999999999875432111
Q ss_pred ------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc--------ccHHHHHHHHhcCCCCcccccCcc
Q 005734 547 ------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE--------LSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 547 ------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.....|+.......+.++|||||||++||++||+.||..... ..+.+++........ +.
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 232 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-------PR 232 (284)
T ss_pred CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC-------CC
Confidence 111224444445678899999999999999999999975332 112233333222210 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
+. ..+.+.++.+++.+|++.+|++||++.||+++..
T Consensus 233 ~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 233 LP--SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred CC--chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 10 1123467889999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=282.59 Aligned_cols=235 Identities=16% Similarity=0.250 Sum_probs=186.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||.|+||.||+|... ++..||+|++..... ......+.+|++++++++|+||+++++++.++. ..++||||
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT--KLWIIMEY 83 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEecccc----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEec
Confidence 67999999999999975 688999998865432 233567999999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.. ..+++.+...++.+++.||+|||+. +++|+||+|+||+++.++.++++|||++.........
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCccc
Confidence 999999999863 3588999999999999999999998 9999999999999999999999999999765432211
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+.......+.++|||||||++|||+||+.||...........+ .. .. .......
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~----~~-~~--------~~~~~~~ 224 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI----PK-NN--------PPTLTGE 224 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh----hc-CC--------CCCCchh
Confidence 1 12234444456788999999999999999999999754322221111 11 00 0122334
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+..+.+++.+||+.+|++||+++++++.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 225 FSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 56788999999999999999999999865
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=287.50 Aligned_cols=254 Identities=13% Similarity=0.180 Sum_probs=187.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|... +|+.|+||.+...............+..|++++++++|+||+++++++.+.+ ..++|||
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e 82 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS--NINLVFE 82 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC--EEEEEEc
Confidence 468999999999999975 6899999998765433211233456788999999999999999999999866 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+ +|+|.+++.... ..+++..+.+++.|+++||+|||+. +|+||||||+||+++.++.++|+|||+++.......
T Consensus 83 ~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 83 FM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred cc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 99 999999996543 4699999999999999999999998 999999999999999999999999999987643211
Q ss_pred cc--------cccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--------ccccc
Q 005734 547 VS--------DDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------FSCMI 609 (680)
Q Consensus 547 ~~--------~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 609 (680)
.. ...|+.. ....++.++|||||||+++||++|..||....+.+..+........+.. .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 11 1112222 1234578899999999999999998777654432222222211111100 00000
Q ss_pred C------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 610 D------PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 610 d------~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. ............++.+++.+||+.+|++|||+.||++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0 00001112234678899999999999999999999973
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=299.37 Aligned_cols=246 Identities=20% Similarity=0.307 Sum_probs=191.8
Q ss_pred hhccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.|..+||+|+|-+||||... +|.+||--.++.... ...+.....|..|+.+|+.++|+|||+++.++.+......-+|
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~-~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDV-TQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHh-hcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence 35689999999999999864 677776432222110 0113344789999999999999999999999987764346789
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEcccccccccCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIALP 543 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~~~~~ 543 (680)
+|.|..|+|..|+... ..++.....+|+.||.+||.|||++ .|+|+|||||.+||+++.+ |.+||+|.|||+.+..
T Consensus 122 TEL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred eecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999998643 3688889999999999999999996 8899999999999999865 8999999999999875
Q ss_pred CCCcc-cccccCCCCC----CCCCCCCeeehhHHHHHHHhCCCCCCccc-cccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKVS-DDIENSVLPP----LADPETNIYSFGILMLEIISGKLPYCEEK-ELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~~-~~~~~~~~~~----~~s~~sDVySfGvvllElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
..... -..|++++|+ .|++..||||||..++||+|+..||.+-. +..+.+.+-+.++. ..+..+-|
T Consensus 199 s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP-~sl~kV~d------- 270 (632)
T KOG0584|consen 199 SHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP-AALSKVKD------- 270 (632)
T ss_pred cccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH-HHhhccCC-------
Confidence 43333 3456776654 46778999999999999999999998643 23344444333322 33444444
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.++.+++.+|+.. .++|||+.|+++.
T Consensus 271 ----Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 271 ----PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ----HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 4788999999999 9999999999863
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=299.73 Aligned_cols=240 Identities=13% Similarity=0.193 Sum_probs=176.7
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||++.. .+++.||+|... ...+.+|++++++++|||||++++++.... ..++|+||
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~lv~e~ 164 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----------RGGTATEAHILRAINHPSIIQLKGTFTYNK--FTCLILPR 164 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechh-----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC--eeEEEEec
Confidence 8899999999999986 468889998642 224678999999999999999999998776 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+. ++|.+++... ..+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 165 ~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 165 YK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 95 7898888543 3689999999999999999999998 999999999999999999999999999975432110
Q ss_pred --------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc--------ccHHHHHHHHhcCCCCcc----
Q 005734 547 --------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE--------LSIEKWAADYLNEPRNFS---- 606 (680)
Q Consensus 547 --------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~--------~~~~~~~~~~~~~~~~~~---- 606 (680)
.....|+......+++++|||||||++|||+||+.|+.+... ..+...+......+..+.
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 111224444445678899999999999999999988753211 111111111111100000
Q ss_pred ----ccc---------CcccCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 ----CMI---------DPSLKSF---KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ----~~~---------d~~l~~~---~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
... .+..... ....+.++.+++.+|++.||++|||++|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000 0000000 0123457889999999999999999999985
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=278.89 Aligned_cols=239 Identities=17% Similarity=0.324 Sum_probs=190.9
Q ss_pred hhccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+|.+.+|+|.||.|-++.- ..|+.||||.++....++ +......++|+++|+.++||||+.++.++...+ ...||
T Consensus 56 E~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd--eqDlvhIRREIeIMSsLNHPhII~IyEVFENkd--KIviv 131 (668)
T KOG0611|consen 56 EITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD--EQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD--KIVIV 131 (668)
T ss_pred HHHHHhcCCcccceeehhhccCCcEeehhhhhhhhccc--HHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc--eEEEE
Confidence 4557899999999999985 689999999887655443 344556889999999999999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||..+|.|++++..+. .|+..+...+..||..|+.|+|.. +++|||||.+|||||+++++||+|||++-++...
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 99999999999997554 699999999999999999999999 9999999999999999999999999999887643
Q ss_pred CCccc--ccccCCC------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKVSD--DIENSVL------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~~~--~~~~~~~------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
...+. ..|-|.. ..|-.++.|-||+||+||-|+.|..||++.+...+ ++..... .+.+
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~l---vrQIs~G--aYrE--------- 272 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRL---VRQISRG--AYRE--------- 272 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHH---HHHhhcc--cccC---------
Confidence 32111 1122222 23457889999999999999999999997543323 3322211 1110
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+.+....-|+++++..+|++|-|..||+..
T Consensus 273 -P~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 273 -PETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred -CCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1122457789999999999999999999875
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=286.30 Aligned_cols=236 Identities=18% Similarity=0.263 Sum_probs=183.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||+|+||.||++... ++..||||.+.... ....+.+.+|+..+++++|+||+++++++..++ ..++||||
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--~~~lv~e~ 100 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD--ELWVVMEF 100 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecch-----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC--eEEEEEeC
Confidence 56899999999999874 68899999875432 233456889999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.++|+|||++.........
T Consensus 101 ~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~ 174 (292)
T cd06658 101 LEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK 174 (292)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc
Confidence 999999998853 2589999999999999999999998 9999999999999999999999999998765322111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+.......+.++|||||||++|||++|+.||...........+...... ... ....
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~----------~~~-~~~~ 243 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP----------RVK-DSHK 243 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC----------ccc-cccc
Confidence 111233333345678999999999999999999999754432222222111111 110 0111
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.+++.+|+..+|++|||++++++.
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 23568889999999999999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=279.51 Aligned_cols=241 Identities=20% Similarity=0.383 Sum_probs=187.9
Q ss_pred hccccCCCCCCeEEEEEeCC-----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 387 FSNIIDTQSGCTIYKGTLSS-----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~-----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
+.+.||.|+||.||+++..+ +..||+|++..... ....+.+..|++++.+++|+||+++++++.+.+ ..
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~ 76 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD----EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE--PL 76 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC----hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--ee
Confidence 34789999999999999853 47899998864432 124567999999999999999999999998876 67
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
+++|||+++++|.+++.......+++.++..++.+++.||+|||+. +++||||||+||++++++.++++|||+++..
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceec
Confidence 9999999999999999755433389999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCccc---------ccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 542 LPKSKVSD---------DIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 542 ~~~~~~~~---------~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
........ ..|+.......+.++||||+|++++||++ |+.||.........+.+.. . ...
T Consensus 154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~---~-~~~------ 223 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKK---G-YRL------ 223 (258)
T ss_pred ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc---C-CCC------
Confidence 53311111 11222233456888999999999999999 7888875433333332221 1 100
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
........++.+++.+|+..+|++|||+.|+++.|
T Consensus 224 ---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 ---PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 01111346789999999999999999999998754
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=297.67 Aligned_cols=250 Identities=11% Similarity=0.166 Sum_probs=183.1
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~l 463 (680)
.+.||+|+||.||++.. .+|+.||||++...... ....+.+.+|+++++.++|+||+++++++...+. ...++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN---LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccc---hHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 37899999999999996 47899999988543211 2234578899999999999999999999876541 14689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+. ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 82 v~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 82 VTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred Eeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 999996 5888887533 4689999999999999999999998 999999999999999999999999999986542
Q ss_pred CCCcc---------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-----------
Q 005734 544 KSKVS---------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP----------- 602 (680)
Q Consensus 544 ~~~~~---------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~----------- 602 (680)
..... ...|+.... ..++.++|||||||+++||+||+.||......+....+......+
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 235 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEG 235 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHH
Confidence 21110 111222222 246788999999999999999999997654333322222211110
Q ss_pred ---------CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 ---------RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 ---------~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..... ...+.........++.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 236 ARAHILRGPHKPPS--LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHhCCCCCCc--hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000 000001112224678899999999999999999999864
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=295.32 Aligned_cols=240 Identities=14% Similarity=0.154 Sum_probs=176.2
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .+++.+|||++..... ........+.+|++++++++|+|||++++++.+++ ..++|||
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~--~~~lv~E 81 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFVMD 81 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--EEEEEEe
Confidence 37899999999999986 4688999998864321 12334567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC--
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK-- 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~-- 544 (680)
||++|+|.+++... ..++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999998643 3578888899999999999999998 9999999999999999999999999997532100
Q ss_pred -----------------------------------------------------CCcccccccCCCCCCCCCCCCeeehhH
Q 005734 545 -----------------------------------------------------SKVSDDIENSVLPPLADPETNIYSFGI 571 (680)
Q Consensus 545 -----------------------------------------------------~~~~~~~~~~~~~~~~s~~sDVySfGv 571 (680)
.+.....|+......++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 000011122223345678899999999
Q ss_pred HHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHH
Q 005734 572 LMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT---MNDIIV 647 (680)
Q Consensus 572 vllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt---m~ev~~ 647 (680)
++|||+||+.||......... ........... .+.... ...++.+++.+++ .+|.+|++ ++++++
T Consensus 237 il~elltG~~Pf~~~~~~~~~---~~i~~~~~~~~---~p~~~~----~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLETQ---MKVINWQTSLH---IPPQAK----LSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHHH---HHHHccCCCcC---CCCccc----CCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999999764422211 11111101010 010011 1245666666654 49999997 777765
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=284.60 Aligned_cols=252 Identities=17% Similarity=0.236 Sum_probs=181.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecCC---CCce
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDDE---PFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~---~~~~ 461 (680)
+.||+|+||+||+|... +|+.||+|.+....... .....+.+|++++.++ +||||+++++++.... ....
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~ 82 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED---GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKV 82 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC---CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceE
Confidence 68999999999999875 68899999886543221 1122355666666655 7999999999986432 1246
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++|+||++ ++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 83 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 83 TLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred EEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 89999997 5899998765555699999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--Ccc------
Q 005734 542 LPKSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFS------ 606 (680)
Q Consensus 542 ~~~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~------ 606 (680)
...... ....|+......++.++|||||||+++||++|+.||......+....+......+. ...
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 432111 12224444445678899999999999999999999975543322222222211110 000
Q ss_pred -cccCcc----cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 -CMIDPS----LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 -~~~d~~----l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+.+. +.....+...++.+++.+|++.||++|||+.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 00111223457889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=284.93 Aligned_cols=236 Identities=17% Similarity=0.314 Sum_probs=184.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||.|++|.||+|.. .+|+.|++|.+..... .....+.+|+++++.++|+||+++++++...+ ..++|+||
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 97 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-----PKKELIINEILVMKELKNPNIVNFLDSFLVGD--ELFVVMEY 97 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-----chHHHHHHHHHHHHhcCCCceeeeeeeEecCc--eEEEEEEe
Confidence 7899999999999985 5789999998865432 22456889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.. ..++|.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||++.........
T Consensus 98 ~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 171 (296)
T cd06655 98 LAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171 (296)
T ss_pred cCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence 999999998853 2589999999999999999999998 9999999999999999999999999998765432211
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+......++.++|||||||++|||+||+.||...........+.. ...... ..+..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~--~~~~~~---------~~~~~ 240 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT--NGTPEL---------QNPEK 240 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCccc---------CCccc
Confidence 1 1123433444567889999999999999999999976442221111111 010000 01112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.+++.+||..+|++||++.++++.
T Consensus 241 ~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 241 LSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 23578899999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=285.42 Aligned_cols=248 Identities=16% Similarity=0.238 Sum_probs=182.3
Q ss_pred HHHhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecC
Q 005734 381 DTACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDD 456 (680)
Q Consensus 381 ~~~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 456 (680)
..+.++|. +.||+|+||.||++... +++.+|+|+..... ....++..|+.++.++ +|+||+++++++...
T Consensus 14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH------DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc------chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 33444554 88999999999999874 67889999875322 1234678899999999 699999999998532
Q ss_pred C---CCceEEEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeE
Q 005734 457 E---PFNRMMVFEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAK 531 (680)
Q Consensus 457 ~---~~~~~lV~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 531 (680)
. ....++||||+++|+|.++++.. ....+++..+..++.++++||.|||+. +|+||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEE
Confidence 1 12579999999999999988632 335689999999999999999999998 999999999999999999999
Q ss_pred EcccccccccCCCCCc---ccccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH
Q 005734 532 VAEICFTTIALPKSKV---SDDIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY 598 (680)
Q Consensus 532 i~DFGla~~~~~~~~~---~~~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~ 598 (680)
|+|||+++........ ......+..| ..++.++|||||||++|||+||+.||......... ...
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~---~~~ 241 (286)
T cd06638 165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL---FKI 241 (286)
T ss_pred EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH---hhc
Confidence 9999998765422111 1111222222 23577899999999999999999998754321111 111
Q ss_pred hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... . .....++ .....++.+++.+||+.+|++||++.||++.
T Consensus 242 ~~~-~-~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 242 PRN-P-PPTLHQP------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccc-C-CCcccCC------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 111 0 0001111 1122568899999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=293.25 Aligned_cols=245 Identities=15% Similarity=0.181 Sum_probs=182.1
Q ss_pred hhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 384 CEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 384 ~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
.++|. +.||+|+||.||++... +++.+|+|++...... .......+.+|+++++.++||||+++++++.+++ .
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~--~ 117 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI--KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR--Y 117 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh--hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--E
Confidence 34454 89999999999999975 6788999988643211 1223456889999999999999999999998876 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++||||+++|+|.+++... .++...+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence 89999999999999998643 478888899999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCc----ccccccCCCC---------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 541 ALPKSKV----SDDIENSVLP---------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 541 ~~~~~~~----~~~~~~~~~~---------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
....... ....+.+.+| ..++.++|||||||++|||++|+.||...... ...............
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~~i~~~~~~~~~ 268 (371)
T cd05622 192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---GTYSKIMNHKNSLTF 268 (371)
T ss_pred cCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCCcccC
Confidence 6432111 1111222222 23678999999999999999999999764422 222222222111110
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQ--RPTMNDIIVQ 648 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~--RPtm~ev~~~ 648 (680)
+. .......+.+++.+|+..++.+ ||+++|+.+.
T Consensus 269 ---~~----~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 269 ---PD----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred ---CC----cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 00 0112357888999999844433 7788888875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=293.06 Aligned_cols=249 Identities=14% Similarity=0.214 Sum_probs=180.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||++.. .+|..||||++...... ......+.+|+.+++.++||||+++++++..... ...++
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 103 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN---QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYL 103 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccc---hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEE
Confidence 8999999999999986 46899999988643211 2334568899999999999999999999865431 13689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++ +|.+.++. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 v~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 104 VMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred EEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 9999965 67766642 478899999999999999999998 999999999999999999999999999976542
Q ss_pred CCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHh-----------------
Q 005734 544 KSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYL----------------- 599 (680)
Q Consensus 544 ~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~----------------- 599 (680)
.... ....|+......++.++|||||||++|||+||+.||.+....+....+....
T Consensus 176 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (359)
T cd07876 176 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN 255 (359)
T ss_pred CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 2111 1122444444567889999999999999999999997543221111111111
Q ss_pred --cCCCCcc-----ccc----CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 600 --NEPRNFS-----CMI----DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 600 --~~~~~~~-----~~~----d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....... +.. .+...........++.+++.+|++.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 000 000000111123568899999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=282.00 Aligned_cols=237 Identities=14% Similarity=0.220 Sum_probs=181.9
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.++||+|+||.||+|.. .++..+|+|++..... .....+|.+|++++.+++||||+++++++...+ ..++|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 79 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT----VELQKQIMSELEILYKCDSPYIIGFYGAFFVEN--RISICTE 79 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC----hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC--EEEEEEe
Confidence 47899999999999986 5788999998864421 234567999999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|..+. .+++.....++.+++.||+|||+. +|+|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~ 150 (279)
T cd06619 80 FMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA 150 (279)
T ss_pred cCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc
Confidence 99999997653 478889999999999999999998 999999999999999999999999999976543211
Q ss_pred c------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc----cHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL----SIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+......++.++||||||+++|||+||+.||...... ............. .+.+.
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-- 221 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-------PPVLP-- 221 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-------CCCCC--
Confidence 1 112244444456788999999999999999999999642211 1111111111110 01110
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......++.+++.+|++.+|++||+++|+++.
T Consensus 222 ~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 222 VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 01123568899999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=286.25 Aligned_cols=250 Identities=13% Similarity=0.198 Sum_probs=183.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||.|++|.||+|+.. +|..||||++...... ......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~ 80 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEF 80 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccc---cccchHHHHHHHHHHhcCCCCCcchhhhcccCC--cEEEEeec
Confidence 78999999999999874 6889999988644321 123356889999999999999999999998777 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+. ++|.+++.......+++..+.+++.+++.||+|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 95 6899998765556799999999999999999999988 9999999999999999999999999998765422111
Q ss_pred c--------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HHHHHHHHhcCCCC-------------
Q 005734 548 S--------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELS-IEKWAADYLNEPRN------------- 604 (680)
Q Consensus 548 ~--------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~~~~~~~~~~~~~------------- 604 (680)
. ...|+.... ...+.++|||||||++|||+||+.||....+.+ ..+...........
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP 236 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence 0 112232211 234778999999999999999999997544222 11211111111000
Q ss_pred -cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 605 -FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 605 -~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.......+.........++.+++.+|++.||++||+++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000000000001112356789999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=279.73 Aligned_cols=245 Identities=18% Similarity=0.238 Sum_probs=188.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||.|+||.||++.. .+|..+|+|.+...... ......+..|++++++++|+||+++++++........+++||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT---EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC---HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 37899999999999986 47788999988654321 334567889999999999999999999887544335789999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHEL--NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~--~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
|+++++|.+++... ....+++...+.++.+++.||+|||..+ ..+++||||||+||++++++.+||+|||++....
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~ 161 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILG 161 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccccc
Confidence 99999999998643 2457999999999999999999999332 3499999999999999999999999999998765
Q ss_pred CCCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 543 PKSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 543 ~~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
...... ...|+.......+.++||||||++++||++|+.||.........+.+.. . .. .
T Consensus 162 ~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~--~~--------~ 228 (265)
T cd08217 162 HDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE---G--KF--------R 228 (265)
T ss_pred CCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc---C--CC--------C
Confidence 332101 1123333344567889999999999999999999976442222222211 1 01 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.....++.+++.+|++.+|++||++++|++.
T Consensus 229 ~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1222334688999999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=285.52 Aligned_cols=250 Identities=16% Similarity=0.183 Sum_probs=181.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|.||+|+.. +|..||||++...... ....+.+.+|++++++++||||+++++++.+++ ..++|+||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~ 80 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE---EGVPSTAIREISLLKELQHPNIVCLQDVLMQES--RLYLIFEF 80 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEecccccc---CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC--eEEEEEec
Confidence 68999999999999975 6899999988654321 122356788999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 468 APNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 68988886433 35789999999999999999999998 999999999999999999999999999876532211
Q ss_pred c--------ccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccH-HHHHHHHhcCCC----------C--
Q 005734 547 V--------SDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSI-EKWAADYLNEPR----------N-- 604 (680)
Q Consensus 547 ~--------~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~-~~~~~~~~~~~~----------~-- 604 (680)
. ....|+... ...++.++||||||++++||+||+.||.+..+... ............ .
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 157 VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 1 111233221 12357789999999999999999999975432211 111111100000 0
Q ss_pred --cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 605 --FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 605 --~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..................++.+++.+|++.||++|||+.+|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000001112357789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=288.64 Aligned_cols=248 Identities=14% Similarity=0.219 Sum_probs=181.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. ++..||+|++...... .....+.+|++++++++||||+++++++..++ ..++||||
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 85 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANIVTLHDIVHTDK--SLTLVFEY 85 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccC----CcchhHHHHHHHHHhCCCCCcceEEEEEeeCC--eEEEEEeC
Confidence 78999999999999875 6788999988654321 12345778999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++ +|.+++... ...+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 86 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 86 LDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred CCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 975 888888643 34589999999999999999999998 9999999999999999999999999998764321111
Q ss_pred c--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccc------cC
Q 005734 548 S--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCM------ID 610 (680)
Q Consensus 548 ~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~------~d 610 (680)
. ...|+... ...++.++|||||||++|||+||+.||......+....+......+.. ...+ .+
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 0 11123221 234678899999999999999999999764433322222222211100 0000 00
Q ss_pred ---cccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 ---PSLK-----SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ---~~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+... ........++.+++.+|++.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000 000122356789999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=284.14 Aligned_cols=250 Identities=16% Similarity=0.217 Sum_probs=184.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
...||+|++|.||+|+.. +|+.||+|++...... ....+.+.+|++++++++|+|++++++++..+. ..++|||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~~v~e 80 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD---PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR--KLHLVFE 80 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccC---ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC--EEEEEEe
Confidence 368999999999999986 6899999988643211 122356889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++++.|..++.. ...++|..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 9999988887643 23689999999999999999999998 999999999999999999999999999987653321
Q ss_pred c--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-----------CCcc
Q 005734 547 V--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-----------RNFS 606 (680)
Q Consensus 547 ~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~ 606 (680)
. ....|+.... ..++.++|||||||++|||+||+.||.+....+....+....... ....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK 235 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence 1 0112232222 346789999999999999999999997654332222222211110 0000
Q ss_pred cccCcccCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 CMIDPSLKS------FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ~~~d~~l~~------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....+.... ........+.+++.+||+.+|++||++.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000010000 00122467889999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=281.34 Aligned_cols=235 Identities=17% Similarity=0.264 Sum_probs=184.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||.|++|.||+|+.. ++..+++|.+..... ......+.+|++++++++|+||+++++++.++. ..++|+||
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~ 80 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA----EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS--KLWIIMEY 80 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeecccc----chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC--eEEEEEEe
Confidence 68999999999999975 688999998865431 223456889999999999999999999998876 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.++++.. .+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||+++........
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccccc
Confidence 9999999999643 689999999999999999999998 9999999999999999999999999999876532111
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+.......+.++||||||+++|||+||+.||...........+. .. ..+.+... .
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~---~~-------~~~~~~~~--~ 222 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP---KN-------NPPSLEGN--K 222 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh---hc-------CCCCCccc--c
Confidence 0 122344444457889999999999999999999997543222111111 11 00111100 0
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....+.+++.+|+..+|++||+++++++
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3357889999999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=281.26 Aligned_cols=238 Identities=19% Similarity=0.236 Sum_probs=183.6
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||.|++|.||++... ++..+|+|+..... ......|.+|++++++++|+||+++++++..+. ..++||||
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIES-----EEELEDFMVEIDILSECKHPNIVGLYEAYFYEN--KLWILIEF 83 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-----HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC--eEEEEeec
Confidence 67999999999999974 68899999886543 234567999999999999999999999998876 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+||+++.++.++|+|||++.........
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK 159 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence 99999999986432 4689999999999999999999998 9999999999999999999999999988765322111
Q ss_pred c--------cccccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 548 S--------DDIENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 548 ~--------~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. ...|+.. .....+.++||||||+++|||++|+.||...... +.......... +.+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~-------~~~- 228 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM---RVLLKILKSEP-------PTL- 228 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH---HHHHHHhcCCC-------CCc-
Confidence 0 1112221 1233567899999999999999999999754322 22222211100 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.....++.+++.+||+.+|++||++.+|++.
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0111223578899999999999999999999864
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=295.85 Aligned_cols=240 Identities=14% Similarity=0.158 Sum_probs=177.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+++.. +++.||||++..... ........+.+|++++.+++|+||+++++.+.+++ ..++||||
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv~E~ 82 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV--LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD--NLYFVMDY 82 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH--HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--EEEEEEeC
Confidence 78999999999999964 688999998854321 11223456889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC---
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK--- 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~--- 544 (680)
+++|+|.+++... ..++......++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 83 IPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 9999999999643 3578888889999999999999998 9999999999999999999999999997532100
Q ss_pred ------------------------------------------------CCcccccccCCCCCCCCCCCCeeehhHHHHHH
Q 005734 545 ------------------------------------------------SKVSDDIENSVLPPLADPETNIYSFGILMLEI 576 (680)
Q Consensus 545 ------------------------------------------------~~~~~~~~~~~~~~~~s~~sDVySfGvvllEl 576 (680)
.+.....|+......++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 00001112222234567889999999999999
Q ss_pred HhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCC---CHHHHHHH
Q 005734 577 ISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP---TMNDIIVQ 648 (680)
Q Consensus 577 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP---tm~ev~~~ 648 (680)
+||+.||.+........ .......... .+... ....++.+++.+|+ .+|.+|+ ++.++++.
T Consensus 238 l~G~~Pf~~~~~~~~~~---~i~~~~~~~~---~~~~~----~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQL---KVINWETTLH---IPSQA----KLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHH---HHhccCcccc---CCCCC----CCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999997654322221 1111100000 01111 12245677777766 4999999 88888865
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-32 Score=278.35 Aligned_cols=242 Identities=14% Similarity=0.192 Sum_probs=182.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|..||||.+.............+.+.+|++++.+++|+||+++++++.+......++|+|
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 379999999999999974 6899999987643322212234567899999999999999999999987654335689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
|+++|+|.+++... ..+++...++++.+++.||+|||+. +++||||||+||+++.++.++|+|||+++......
T Consensus 87 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 87 HMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred ecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 99999999998643 3578999999999999999999998 99999999999999999999999999987643210
Q ss_pred ----C------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 546 ----K------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 546 ----~------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
. .....|+.......+.++|||||||++|||++|+.||...... ..+......+. .+ .
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~------~~---~ 229 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM---AAIFKIATQPT------NP---V 229 (265)
T ss_pred cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH---HHHHHHhcCCC------CC---C
Confidence 0 0112234333445678899999999999999999999653211 11122111111 01 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+......+.+++.+|+. +|++||+++||++
T Consensus 230 ~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 230 LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 122334577889999985 9999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=278.83 Aligned_cols=244 Identities=18% Similarity=0.293 Sum_probs=183.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccch-----hhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSK-----DWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~-----~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
+.||+|++|.||+|.. .+|+.+|||.+...... .......+.+.+|++++++++|+|++++++++...+ ..+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (272)
T cd06629 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE--YLS 84 (272)
T ss_pred ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC--ceE
Confidence 6899999999999986 46889999987643211 111223457889999999999999999999998876 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+|+||+++|+|.++++.. ..+++..+..++.+++.||.|||+. +++||||||+||++++++.++++|||+++...
T Consensus 85 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 85 IFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred EEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999654 4689999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCc----------ccccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKV----------SDDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~----------~~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ....|+.... ...+.++||||||++++|+++|+.||..... .... ....... ....++
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~~~~-~~~~~~~--~~~~~~ 234 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA--IAAM-FKLGNKR--SAPPIP 234 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch--HHHH-HHhhccc--cCCcCC
Confidence 21110 0111222221 2367889999999999999999999964331 1111 1111110 011111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.. .......++.+++.+||..+|++||+|++|++
T Consensus 235 ~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 235 PD---VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cc---ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11 11223468889999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=281.26 Aligned_cols=237 Identities=19% Similarity=0.220 Sum_probs=181.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. ++..+++|...... ....+.+.+|++++++++|+||+++++++..++ ..++||||
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 90 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKS-----EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG--KLWIMIEF 90 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC--eEEEEEec
Confidence 68999999999999975 58889999886543 234567899999999999999999999998776 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|..++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 166 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR 166 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence 99999998875433 4689999999999999999999998 9999999999999999999999999998764321110
Q ss_pred --------ccccccCCC-----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 548 --------SDDIENSVL-----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 548 --------~~~~~~~~~-----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....|+... ...++.++|||||||++|||+||+.||..... .+.......... +..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~-------~~~- 235 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVLLKIAKSEP-------PTL- 235 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH---HHHHHHHhcCCC-------ccC-
Confidence 111233221 22346789999999999999999999865332 122222211110 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+.....++.+++.+||+.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 011122357889999999999999999999976
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=283.89 Aligned_cols=250 Identities=18% Similarity=0.241 Sum_probs=186.1
Q ss_pred HHHHHHhhhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEE
Q 005734 378 LELDTACEDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYC 453 (680)
Q Consensus 378 ~~l~~~~~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~ 453 (680)
.++..++++|. +.||+|+||.||++.. .+++.+|+|++.... .....+.+|+.++.++ +|||++++++++
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~------~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS------DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc------cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 34444566665 8999999999999997 478899999875432 1234577899999999 799999999998
Q ss_pred ecCCC---CceEEEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 005734 454 EDDEP---FNRMMVFEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 454 ~~~~~---~~~~lV~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 528 (680)
...+. ...++|+||+++|+|.++++.. ....+++..+..++.+++.||+|||+. +++||||||+||++++++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 75431 2469999999999999988632 345689999999999999999999988 999999999999999999
Q ss_pred CeEEcccccccccCCCCCcc--------cccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 529 AAKVAEICFTTIALPKSKVS--------DDIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~~~~--------~~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
.+||+|||+++......... ...|+.... ...+.++|||||||++|||+||+.||........ +
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~---~ 242 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT---L 242 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH---H
Confidence 99999999987654221110 111222111 1257899999999999999999999975432111 1
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....... ...+.+ ++.....+.+++.+||+.+|++||++.|+++
T Consensus 243 ~~~~~~~--~~~~~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 243 FKIPRNP--PPTLLH------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHhcCC--CCCCCc------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1111110 001111 1223357899999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=276.83 Aligned_cols=239 Identities=16% Similarity=0.255 Sum_probs=186.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||++.. .++..+|||.+..... .......+..|++++++++|+||+++++.+..++ ..++|+|
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 79 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM---TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK--ALMIVME 79 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEecccc---ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC--EEEEEEe
Confidence 37899999999999987 4678899998865432 2234567999999999999999999999988766 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~~~~~~~ 545 (680)
|+++++|.+++.......+++..+.+++.++++||+|||+. +++||||||+||+++++ +.+|++|||+++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999999765556789999999999999999999998 99999999999999855 568999999998765322
Q ss_pred Cc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 KV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ....|+.......+.++||||||++++||++|+.||......... ....... ... .+.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~---~~~~~~~--~~~--------~~~ 223 (256)
T cd08220 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALV---LKIMSGT--FAP--------ISD 223 (256)
T ss_pred cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHH---HHHHhcC--CCC--------CCC
Confidence 11 112234333445678899999999999999999999764322222 2221110 000 111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+||+.+|++|||+.|+++
T Consensus 224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 RYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 23357889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=286.29 Aligned_cols=236 Identities=18% Similarity=0.299 Sum_probs=183.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||++.. .+|..||+|.+..... ...+.+.+|+.+++.++|+||+++++++..++ ..++|||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e 96 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ-----PKKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVME 96 (297)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc-----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--EEEEeec
Confidence 37899999999999996 5789999998865432 22456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++.. ..+++.++.+++.+++.||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 97 YLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999999999853 3579999999999999999999998 999999999999999999999999999876543221
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+.......+.++|||||||++||++||+.||.......... ....... +.. ..+.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~~~~~~~-------~~~-~~~~ 239 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGT-------PEL-QNPE 239 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---eeccCCC-------CCC-CCcc
Confidence 11 112333334456788999999999999999999997543211100 0000000 000 0112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+||+.+|++||++++|++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 23356889999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=280.11 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=187.6
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhh-----HHH----HHHHHHHHHHHHHcCCCCcccceeeEEecCCC
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDW-----LKS----QEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~-----~~~----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 458 (680)
..||+|.||.|-+|.. .+++.||||++..+..... ... ..+...+||.+|++++|||||+|+.+..++..
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s 182 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPES 182 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCccc
Confidence 6799999999999986 5789999999976542210 011 12478899999999999999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
...|||+|||..|.+...-. ....++..+..++..++..||.|||.+ +|+||||||+|+||++++++||+|||.+
T Consensus 183 ~~~YlVley~s~G~v~w~p~--d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKIsDFGVs 257 (576)
T KOG0585|consen 183 DKLYLVLEYCSKGEVKWCPP--DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKISDFGVS 257 (576)
T ss_pred CceEEEEEeccCCccccCCC--CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEeecccee
Confidence 68899999999998765432 222389999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCc--------ccccccCCCC---------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC
Q 005734 539 TIALPKSKV--------SDDIENSVLP---------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 539 ~~~~~~~~~--------~~~~~~~~~~---------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
-........ ....|.+.+| .+.+.+.||||+||+||-|+.|+.||.++... +...+.+.+
T Consensus 258 ~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~---~l~~KIvn~ 334 (576)
T KOG0585|consen 258 NEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL---ELFDKIVND 334 (576)
T ss_pred eecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH---HHHHHHhcC
Confidence 765321100 1111222222 23356789999999999999999999875433 333444443
Q ss_pred CCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 602 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
+-.+.. ..+..+.+.+|+++++.+||++|.+..+|....---.
T Consensus 335 pL~fP~---------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 335 PLEFPE---------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred cccCCC---------cccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 322111 1234468899999999999999999999987654433
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=273.38 Aligned_cols=253 Identities=13% Similarity=0.173 Sum_probs=191.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc-ccceeeEEecCCC----CceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN-FVNLIGYCEDDEP----FNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~----~~~~ 462 (680)
+.||+|+||+||+|+. .+|+.||+|++......+. ......+|+.++++++|+| ||+|++++...+. ...+
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG---~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~ 93 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG---VPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLY 93 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC---CCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEE
Confidence 6799999999999996 4789999999987653221 2234679999999999999 9999999987551 1357
Q ss_pred EEEEecCCCChhhhhccCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 463 MVFEYAPNGTVFEHLHIKEM--DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~--~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+|+||+.. +|.+++..... ..++-.....++.|+.+||+|||++ +|+||||||.|||+++++.+||+|||+|+.
T Consensus 94 lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 94 LVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred EEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHH
Confidence 99999955 99999975543 4677788999999999999999999 999999999999999999999999999997
Q ss_pred cC-CCCCccc-------ccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc--ccc
Q 005734 541 AL-PKSKVSD-------DIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS--CMI 609 (680)
Q Consensus 541 ~~-~~~~~~~-------~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 609 (680)
.. +...... ..|+...+ ..+++..||||+||++.||++++.-|.++.+.+....+-+.+..+..-. .+.
T Consensus 170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~ 249 (323)
T KOG0594|consen 170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS 249 (323)
T ss_pred hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence 65 2211111 12333333 3689999999999999999999999988776665555555554432111 100
Q ss_pred -Ccc----cCC------CCHHH---HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 610 -DPS----LKS------FKQNE---LEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 610 -d~~----l~~------~~~~~---~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
-++ ... ..... .....+++.+|++.+|..|.|++.++.+
T Consensus 250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 011 100 01111 1378899999999999999999999875
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=284.03 Aligned_cols=244 Identities=14% Similarity=0.168 Sum_probs=184.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +++.|++|.+..... ........+.+|+++++.++|+||+++++.+..++ ..++|||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL--ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR--HLCMVME 81 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh--hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC--EEEEEEe
Confidence 378999999999999975 578899998764321 11233457889999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
|+++|+|.+++... ..+++.....++.+++.||+|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 82 ~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 82 YVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 99999999999643 3689999999999999999999998 99999999999999999999999999987522100
Q ss_pred ----------------------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC
Q 005734 546 ----------------------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR 603 (680)
Q Consensus 546 ----------------------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~ 603 (680)
......++.......+.++||||||+++||++||+.||.+..... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~---~~~~~~~~~~ 233 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---LFGQVISDDI 233 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhccc
Confidence 000112333333456888999999999999999999997643222 2222211110
Q ss_pred CcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 604 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
. .+. .......++.+++.+||+.+|++||++.++.+.|+.
T Consensus 234 ~-----~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 234 E-----WPE---GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred C-----CCC---ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 0 000 001223678999999999999999997666665554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=301.91 Aligned_cols=253 Identities=16% Similarity=0.229 Sum_probs=179.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC------CCCc
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD------EPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~ 460 (680)
.+.||+|+||.||+|... +++.||||++.... ....+|+.++++++|||||++++++... ....
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 389999999999999974 68899999875321 1234799999999999999999886432 1113
Q ss_pred eEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICF 537 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGl 537 (680)
.++||||+++ +|.+++.. .....+++.....++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecccc
Confidence 5689999974 78777642 2345789999999999999999999998 999999999999999664 799999999
Q ss_pred ccccCCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC------
Q 005734 538 TTIALPKSKVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR------ 603 (680)
Q Consensus 538 a~~~~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~------ 603 (680)
++......... ...|+.... ..++.++|||||||++|||+||+.||.+....+....+......+.
T Consensus 218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~ 297 (440)
T PTZ00036 218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE 297 (440)
T ss_pred chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 98764322111 112333222 3568889999999999999999999976543322222222211110
Q ss_pred ---CcccccCcc-----cC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 604 ---NFSCMIDPS-----LK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 604 ---~~~~~~d~~-----l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
.+..+--+. +. .++...+.++.+++.+||+.||.+|||+.|+++. ++++.
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 000000000 00 0122234678999999999999999999999854 44443
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=288.98 Aligned_cols=250 Identities=12% Similarity=0.156 Sum_probs=180.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|.. .++..||||++..... .....+.+.+|++++++++|+||+++++++..... ...++
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 97 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ---SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYL 97 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhh---hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEE
Confidence 7899999999999986 4778999998864321 12234567899999999999999999998764321 14689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
++|++ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 98 ~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 98 VTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred EeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 99998 7899988753 3589999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCccc-----ccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C-cccc-------
Q 005734 544 KSKVSD-----DIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N-FSCM------- 608 (680)
Q Consensus 544 ~~~~~~-----~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~-~~~~------- 608 (680)
...... ..|+.... ..++.++|||||||++|||++|+.||......+....+......+. . ...+
T Consensus 171 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
T cd07878 171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARK 250 (343)
T ss_pred CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHH
Confidence 322111 12332222 3467889999999999999999999975432222222211111100 0 0000
Q ss_pred cCcccCCCC--------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 609 IDPSLKSFK--------QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 609 ~d~~l~~~~--------~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+...+ ......+.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 251 YIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 1112457899999999999999999999965
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-32 Score=280.78 Aligned_cols=249 Identities=16% Similarity=0.218 Sum_probs=186.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||.|++|.||++... +++.+|+|.+..... ......+.+|++++++++||||++++++|.+......++|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN----PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred EEEeccCCceEEEEEEECCCCeEEEEEEEecCCc----hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 378999999999999984 678899998864432 133567899999999999999999999997654335799999
Q ss_pred ecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|+++++|.+++.. .....+++.....++.++++||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999988753 2345689999999999999999999998 9999999999999999999999999998765422
Q ss_pred CCc------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc--ccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKV------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE--LSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... ....|+......++.++||||+|+++|||+||+.||..... ....+.......... .. +.... ..
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~-~~ 234 (287)
T cd06621 159 LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN--PE-LKDEP-GN 234 (287)
T ss_pred ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc--hh-hccCC-CC
Confidence 111 11123333345668899999999999999999999975421 111222222111100 00 00000 00
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......+.+++.+||+.+|++||||.||++
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1123467899999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-32 Score=275.33 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=185.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|... ++..+++|.+..... ...+.+.+|++++++++||||+++++++.+.+ ..+++||
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~l~~e 80 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG-----DDFEIIQQEISMLKECRHPNIVAYFGSYLRRD--KLWIVME 80 (262)
T ss_pred EEEecCCCceEEEEeEecCCCCEEEEEEEEcCch-----hhHHHHHHHHHHHHhCCCCChhceEEEEEeCC--EEEEEEe
Confidence 478999999999999974 578899998875432 23567899999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ...++...+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 81 YCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred CCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 99999999998643 24689999999999999999999998 999999999999999999999999999876543211
Q ss_pred c--------ccccccCCCCC---CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 V--------SDDIENSVLPP---LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ~--------~~~~~~~~~~~---~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
. ....|+..... ..+.++||||||+++|||+||+.||........... .... .+ .+....
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~---~~~~--~~----~~~~~~ 227 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL---ISKS--NF----PPPKLK 227 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhc--cC----CCcccc
Confidence 1 11223433333 567789999999999999999999975432211111 1111 00 000011
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......++.+++.+||..+|++||++++|+.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 12234567899999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=290.50 Aligned_cols=231 Identities=15% Similarity=0.164 Sum_probs=172.3
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecCCCCceEEEEE
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
||+|+||+||+|+.. +|+.||||++...... .......+..|..++.+. +||||+++++++.+.. ..++|||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~--~~~lv~e 76 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV--AKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS--DLYLVTD 76 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh--hhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC--eEEEEEc
Confidence 799999999999975 6899999998643211 122334556677777665 6999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++.....++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 77 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~ 151 (330)
T cd05586 77 YMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK 151 (330)
T ss_pred CCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC
Confidence 99999999998643 4689999999999999999999998 999999999999999999999999999876432111
Q ss_pred cc--------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 547 VS--------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 547 ~~--------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.. ...|+.... ..++.++|||||||++|||+||+.||........ ..........+. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~---~~~i~~~~~~~~----~------ 218 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM---YRNIAFGKVRFP----K------ 218 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH---HHHHHcCCCCCC----C------
Confidence 11 112332222 2367889999999999999999999976432222 222211111111 0
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMN 643 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ 643 (680)
.....++.+++.+|++.+|++||++.
T Consensus 219 ~~~~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 219 NVLSDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred ccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence 01225678999999999999999543
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-32 Score=282.80 Aligned_cols=241 Identities=17% Similarity=0.241 Sum_probs=184.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||+|++....... .....++.+|++++++++||||+++.++|.+.+ ..++|+|
T Consensus 20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 95 (307)
T cd06607 20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH--TAWLVME 95 (307)
T ss_pred heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC--eEEEEHH
Confidence 378999999999999975 68899999886433211 234467899999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++ |++.+.+.... ..+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||++........
T Consensus 96 ~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~ 170 (307)
T cd06607 96 YCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS 170 (307)
T ss_pred hhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence 996 68877775332 4689999999999999999999998 999999999999999999999999999877643322
Q ss_pred cc----cccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 VS----DDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 ~~----~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.. ...|+.. ....++.++||||||+++|||+||+.||...........+ ... . . +.+ ....
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~---~~~-~-~-----~~~--~~~~ 238 (307)
T cd06607 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQN-D-S-----PTL--SSND 238 (307)
T ss_pred ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH---hcC-C-C-----CCC--Cchh
Confidence 11 1123322 1244678999999999999999999998754322221111 111 0 0 111 1122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
...++.+++.+||+.+|++||+|.+|+...
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 239 WSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred hCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 446789999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=276.51 Aligned_cols=239 Identities=16% Similarity=0.208 Sum_probs=181.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+++.+|+|.++.... .....+.+|+.+++.++||||+++++++...+ ..++|+|
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~--~~~lv~e 86 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-----EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD--KLWICME 86 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-----hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC--EEEEEEe
Confidence 37899999999999986 4688999998865431 22346788999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++.+...++.+++.||+|||+. +++|+||||+||+++.++.+||+|||++........
T Consensus 87 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 87 FCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred ccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 99999999998643 3689999999999999999999998 999999999999999999999999999876542211
Q ss_pred --------cccccccCCC---CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 --------VSDDIENSVL---PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 --------~~~~~~~~~~---~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.....|+... ...++.++|||||||++|||++|+.||....+..... ...... .. .+....
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~---~~~~~~--~~---~~~~~~ 233 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMTKSN--FQ---PPKLKD 233 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH---hhhccC--CC---CCcccc
Confidence 0111233221 2346778999999999999999999986543211111 111110 00 000100
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......+.+++.+|++.+|++||++++|++
T Consensus 234 -~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 234 -KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0012246889999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=284.98 Aligned_cols=186 Identities=15% Similarity=0.208 Sum_probs=146.5
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
..||+|+||.||+|+.. +++.+|+|.+.... ....+.+|++++++++||||+++++++........++|+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC-------CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 68999999999999864 46789999875432 123467899999999999999999998754433578999
Q ss_pred EecCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeEEcc
Q 005734 466 EYAPNGTVFEHLHIK-------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL----TDDYAAKVAE 534 (680)
Q Consensus 466 ey~~~GsL~~~l~~~-------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~ki~D 534 (680)
||+. ++|.+++... ....+++.....++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence 9995 5888887422 123589999999999999999999998 99999999999999 4567899999
Q ss_pred cccccccCCCCCc-----------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCc
Q 005734 535 ICFTTIALPKSKV-----------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCE 585 (680)
Q Consensus 535 FGla~~~~~~~~~-----------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~ 585 (680)
||+++........ ....|+.... ..++.++||||+||+++||+||+.||..
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 9999876422110 0112332222 3467889999999999999999999964
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=283.59 Aligned_cols=236 Identities=17% Similarity=0.229 Sum_probs=183.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||+|+||.||++... +++.||+|++..... ...+.+.+|+.++.+++||||+++++++..++ ..++|+||
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~iv~e~ 99 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE--ELWVLMEF 99 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-----chHHHHHHHHHHHHhCCCCchhhhhhheeeCC--eEEEEEec
Confidence 47999999999999874 789999998865432 22456889999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++.. ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 100 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~ 173 (297)
T cd06659 100 LQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 173 (297)
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccccc
Confidence 999999998753 3589999999999999999999998 9999999999999999999999999998755422111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+.......+.++|||||||+++||++|+.||...........+. ...... .. ....
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~----~~----~~~~ 242 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR---DSPPPK----LK----NAHK 242 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---ccCCCC----cc----ccCC
Confidence 1112333333456889999999999999999999997543322222211 110000 00 0111
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.+++.+|++.+|++||+++++++.
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 22568899999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=284.86 Aligned_cols=248 Identities=14% Similarity=0.213 Sum_probs=182.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. ++..||+|.+...... .....+.+|++++++++|+||+++++++..++ ..++|+||
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~--~~~lv~e~ 85 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFEY 85 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc----CchhHHHHHHHHHHhcCCCCcceEEEEEecCC--eEEEEEec
Confidence 78999999999999875 6788999988644321 12345778999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
++ ++|.+++... ...+++.....++.++++||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 86 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 86 LD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 97 6999988643 34689999999999999999999998 9999999999999999999999999998765422111
Q ss_pred c---cccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--CcccccC------
Q 005734 548 S---DDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFSCMID------ 610 (680)
Q Consensus 548 ~---~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d------ 610 (680)
. ...+.+..| ..++.++|||||||++|||+||+.||...........+......+. ....+++
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 1 111122222 2357789999999999999999999976443222222222221110 0000000
Q ss_pred ---cccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 ---PSLK-----SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ---~~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+... .........+.+++.+|++.||.+|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 001123456789999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=286.59 Aligned_cols=186 Identities=15% Similarity=0.208 Sum_probs=146.1
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
..||+|+||.||+|+.. ++..+|+|.+.... ....+.+|++++++++||||+++++++........++|+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEE
Confidence 68999999999999975 45789999875432 123577899999999999999999998754433678999
Q ss_pred EecCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeEEcc
Q 005734 466 EYAPNGTVFEHLHIK-------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL----TDDYAAKVAE 534 (680)
Q Consensus 466 ey~~~GsL~~~l~~~-------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~ki~D 534 (680)
||++ ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 80 DYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 9996 4788776421 223589999999999999999999998 99999999999999 5667999999
Q ss_pred cccccccCCCCCc-----------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCc
Q 005734 535 ICFTTIALPKSKV-----------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCE 585 (680)
Q Consensus 535 FGla~~~~~~~~~-----------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~ 585 (680)
||+++........ ....|+.... ..++.++|||||||++|||+||+.||..
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9999876422110 0112332222 3467889999999999999999999864
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=277.70 Aligned_cols=237 Identities=17% Similarity=0.256 Sum_probs=185.5
Q ss_pred hccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||+|+||.||+|.. .++..+|||....... ......|.+|++.+++++|+||+++++++.+++ ..++||
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 81 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIM 81 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC--eEEEEE
Confidence 347899999999999986 4688999998754321 233467899999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++.. ..+++.....++.+++.|++|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 82 EYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred EeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999999999863 3589999999999999999999998 99999999999999999999999999987654321
Q ss_pred Cc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.. ....|+.......+.++|||||||+++||+||+.|+...........+ ... . . + ...
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~-~-~-----~---~~~ 222 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI---PKN-N-P-----P---TLE 222 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH---hcC-C-C-----C---CCC
Confidence 10 112234433455678899999999999999999999754322222211 111 0 0 0 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.+|++||++.++++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 223 GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 2233678899999999999999999999984
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=288.00 Aligned_cols=241 Identities=13% Similarity=0.192 Sum_probs=196.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
-+.+|+|+||.++..+.+ ++..+++|.+...... ....+...+|+.++++++|||||.+...+.+++. ..+|||+
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t---~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~-~l~Ivm~ 84 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT---EPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ-LLCIVME 84 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccC---chhhHHHHHHHHHHHhccCCCeeeeccchhcCCc-eEEEEEe
Confidence 378999999999888764 6778999988765532 2344578999999999999999999999988773 3799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||+||++.+.+...++..++..+..++..|++.|+.|||+. .|+|||||+.||++..+..+||+|||+|+.+.+...
T Consensus 85 Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~ 161 (426)
T KOG0589|consen 85 YCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS 161 (426)
T ss_pred ecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence 99999999999877778899999999999999999999988 999999999999999999999999999999886542
Q ss_pred cc---cccccC-----CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS---DDIENS-----VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~---~~~~~~-----~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...+.| .....+..|+||||+||++|||++-+++|...+- ...+.+..+.. ++ ..+.
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m---~~Li~ki~~~~------~~----Plp~ 228 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM---SELILKINRGL------YS----PLPS 228 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch---HHHHHHHhhcc------CC----CCCc
Confidence 21 222333 3445789999999999999999999999987543 33333333321 11 1233
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++..++..|+..+|..||++.+++.+
T Consensus 229 ~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 229 MYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 344789999999999999999999999976
|
|
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=283.70 Aligned_cols=250 Identities=15% Similarity=0.256 Sum_probs=183.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +++.+|+|++...... ....+.+.+|++++++++|+||+++++++..++ ..++|+|
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 80 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD---KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK--RLYLVFE 80 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc---chhhHHHHHHHHHHHhcCCcchhhHHHhcccCC--eEEEEEe
Confidence 378999999999999985 5889999987543321 223456889999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|..+.... ..++|..++.++.++++||+|||+. +++||||||+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 99999998877533 3589999999999999999999998 999999999999999999999999999876543221
Q ss_pred cc--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-CC----------cc
Q 005734 547 VS--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-RN----------FS 606 (680)
Q Consensus 547 ~~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-~~----------~~ 606 (680)
.. ...|+... ....+.++|||||||++|||+||+.||......+....+....... .. ..
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA 235 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence 11 11122222 1235678999999999999999999986543222211111111100 00 00
Q ss_pred cccCcccCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 CMIDPSLKS------FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ~~~d~~l~~------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+..+.... ........+.+++.+||+.+|++||+|.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000111100 01123467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-32 Score=275.63 Aligned_cols=242 Identities=18% Similarity=0.272 Sum_probs=186.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||.|++|+||+|... ++..+++|++...... .....+.+|++.++.++|+||+++++.+..++ ..++|+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv~e 79 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ----TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD--ELWLVMP 79 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc----hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC--EEEEEEe
Confidence 478999999999999964 6788999988643321 24567899999999999999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEM-DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~-~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|+++++|.++++.... ..+++.....++.+++.||+|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999999999975432 5689999999999999999999988 99999999999999999999999999987765332
Q ss_pred Ccc------------cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC-CCCcccccCc
Q 005734 546 KVS------------DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE-PRNFSCMIDP 611 (680)
Q Consensus 546 ~~~------------~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~ 611 (680)
... ...|+..... ..+.++|||||||+++||+||+.||....... ...+.... +.......
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~-- 231 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK---VLMLTLQNDPPSLETGA-- 231 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh---hHHHHhcCCCCCcCCcc--
Confidence 211 0112222222 56788999999999999999999997543221 11111111 11111000
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......++.+++.+|++.+|++||+++++++
T Consensus 232 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 232 ----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ----ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 01133467889999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-32 Score=274.67 Aligned_cols=239 Identities=17% Similarity=0.257 Sum_probs=186.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|..+|+|.+..... .....+.+.+|++++++++|+||+++++++.... ..++|+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e 79 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM---PVKEKEASKKEVILLAKMKHPNIVTFFASFQENG--RLFIVME 79 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc---cchhhHHHHHHHHHHHhCCCCChhhhhheeccCC--eEEEEEe
Confidence 478999999999999985 578899998765321 1223457889999999999999999999998876 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~~ 545 (680)
|+++++|.+++.......++|..+.+++.++++||+|||+. +++|+||||+||++++++ .+|++|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 99999999999765555689999999999999999999998 999999999999999875 46999999987764322
Q ss_pred Ccc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...|+.......+.++|||||||+++|+++|+.||.... ..+++....... ... . .
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~--~~~-~-------~ 223 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN---LHQLVLKICQGY--FAP-I-------S 223 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHhccc--CCC-C-------C
Confidence 111 112333333456789999999999999999999996533 233333332221 110 1 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+++.+|+..+|++|||+.|+++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 122357889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=286.72 Aligned_cols=244 Identities=15% Similarity=0.195 Sum_probs=180.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.+ +++.+|+|++..... ........|..|+.++..++|+||+++++++.+.+ ..++|||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM--LKRAETACFREERDVLVNGDNQWITTLHYAFQDEN--NLYLVMD 81 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC--EEEEEEe
Confidence 378999999999999975 577899998854221 11233456889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 y~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 82 YYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred ccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 99999999999743 24689999999999999999999998 999999999999999999999999999876532211
Q ss_pred cc----cccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 547 VS----DDIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 547 ~~----~~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.. ...+.+..| ..++.++|||||||++|||++|+.||.... ..+............. +...
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~---~~~~~~~i~~~~~~~~--~p~~ 232 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES---LVETYGKIMNHKERFQ--FPAQ 232 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC---HHHHHHHHhCCCcccc--CCCc
Confidence 11 111222222 346789999999999999999999997643 2233333322211111 1111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCC--CCCCCHHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDL--RQRPTMNDIIVQ 648 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P--~~RPtm~ev~~~ 648 (680)
......++.+++.+|+..++ ..|++++|+++.
T Consensus 233 ----~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 233 ----VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ----cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11223567788888775544 447899999876
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-32 Score=290.54 Aligned_cols=249 Identities=12% Similarity=0.190 Sum_probs=180.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||++... .++.||||++...... ......+.+|+.+++.++||||+++++++..... ...++
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 99 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYL 99 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccC---hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEE
Confidence 78999999999999864 6889999988643211 2334568899999999999999999998864431 14689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 100 v~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 100 VMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred Ehhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 9999964 77777642 488999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH------------------
Q 005734 544 KSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY------------------ 598 (680)
Q Consensus 544 ~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~------------------ 598 (680)
.... ....|+......++.++|||||||++|||++|+.||.+....+....+...
T Consensus 172 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T cd07874 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_pred ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHH
Confidence 2111 112233333445788999999999999999999999754322111111110
Q ss_pred -hcCCCCcccccCc-----cc----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 599 -LNEPRNFSCMIDP-----SL----KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 599 -~~~~~~~~~~~d~-----~l----~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
............+ .. .........++.+++.+|++.||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000000000 00 00111223578899999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-32 Score=281.02 Aligned_cols=250 Identities=15% Similarity=0.208 Sum_probs=184.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||.|++|.||+|... +|..|+||++...... ......+.+|++++++++|+|++++++++.+++ ..++|||
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~--~~~iv~e 78 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED---EGVPSTAIREISLLKELNHPNIVRLLDVVHSEN--KLYLVFE 78 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc---ccchhHHHHHHHHHHhcCCCCccCHhheeccCC--eEEEEEe
Confidence 368999999999999874 7999999988654321 123356889999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++ ++|.+++.......+++..+++++.++++||+|||+. +++||||+|+||++++++.++|+|||+++.......
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 994 6999998755445789999999999999999999998 999999999999999999999999999976542211
Q ss_pred c--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HHHHHHHHhcCCCC------------
Q 005734 547 V--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELS-IEKWAADYLNEPRN------------ 604 (680)
Q Consensus 547 ~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~~~~~~~~~~~~~------------ 604 (680)
. ....|+.... ..++.++||||||+++|||+||+.||....... ..+..+. ...+..
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRT-LGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCChHHhhhhhhchhh
Confidence 1 0112332222 235778999999999999999999997543221 1111111 111000
Q ss_pred ---cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 605 ---FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 605 ---~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
......+............+.+++.+|++.+|++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000001111122357889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-32 Score=297.52 Aligned_cols=243 Identities=11% Similarity=0.131 Sum_probs=176.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
...||+|+||.||++... +++.||||.... ..+.+|++++++++|+|||++++++..++ ..++|||
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~--~~~lv~e 240 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----------ASSVHEARLLRRLSHPAVLALLDVRVVGG--LTCLVLP 240 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEecccc-----------cCHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEE
Confidence 388999999999999985 578899985321 23568999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+ .|+|.+++.... ..++|.+++.|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 241 ~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 241 KY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99 579998886432 3699999999999999999999998 999999999999999999999999999986542211
Q ss_pred c----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc--------cccHHHHHHHHhcCCCCcccc
Q 005734 547 V----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK--------ELSIEKWAADYLNEPRNFSCM 608 (680)
Q Consensus 547 ~----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 608 (680)
. ....++......++.++|||||||++|||++|..|+.... ...+...+.........+...
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 1 1112333444567889999999999999999887653211 112222222211100001000
Q ss_pred cC----------------cccCC-CCH---HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 609 ID----------------PSLKS-FKQ---NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 609 ~d----------------~~l~~-~~~---~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.. +.... ... .....+.+|+.+|++.||.+|||+.|+++.
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 00000 000 112367899999999999999999999863
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=277.19 Aligned_cols=237 Identities=17% Similarity=0.264 Sum_probs=186.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|... ++..+++|++..... ....+..|++++++++|+|++++++++.... ..++|+|
T Consensus 24 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 95 (286)
T cd06614 24 LEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ------NKELIINEILIMKDCKHPNIVDYYDSYLVGD--ELWVVME 95 (286)
T ss_pred hHhccCCCCeEEEEEEEccCCcEEEEEEEecCch------hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC--EEEEEEe
Confidence 378999999999999986 688999998865431 3557889999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++.... ..+++..+..++.+++.||+|||+. +|+|+||||+||+++.++.++|+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 999999999997543 4799999999999999999999997 999999999999999999999999998876542211
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||+||+.||............ ... . ..... ...
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~---~~~-~-~~~~~------~~~ 240 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI---TTK-G-IPPLK------NPE 240 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hhc-C-CCCCc------chh
Confidence 0 112233333445688999999999999999999999754322221111 111 0 00000 011
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+|++.+|.+||++.+|++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 241 KWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 13367889999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=277.37 Aligned_cols=236 Identities=12% Similarity=0.134 Sum_probs=179.7
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
||+|+||+||++... +|+.+|+|.+....... ......+..|++++++++||||+++++++...+ ..++|+||++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~~~ 76 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK--RKGEQMALNEKKILEKVSSRFIVSLAYAFETKD--DLCLVMTLMN 76 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh--hhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC--eEEEEEecCC
Confidence 689999999999864 68899999886433211 223456788999999999999999999998776 6799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc--
Q 005734 470 NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV-- 547 (680)
Q Consensus 470 ~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~-- 547 (680)
+++|.+++.......+++..+..++.+++.||.|||+. +++||||||+||++++++.+||+|||++.........
T Consensus 77 ~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (277)
T cd05577 77 GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKG 153 (277)
T ss_pred CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccc
Confidence 99999999765555799999999999999999999998 9999999999999999999999999998765422111
Q ss_pred -----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH-hcCCCCcccccCcccCCCCHHHH
Q 005734 548 -----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 -----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
....|+.......+.++|||||||+++||++|+.||...........+... ..... ..+....
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 222 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAV-----------EYPDKFS 222 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccc-----------cCCccCC
Confidence 112234333445678899999999999999999999754321111111111 11110 1111223
Q ss_pred HHHHHHHHHccccCCCCCCCHHH
Q 005734 622 EAICEVIKECIKTDLRQRPTMND 644 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~e 644 (680)
..+.+++.+||+.+|++||+.++
T Consensus 223 ~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 223 PEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHHHccCChhHccCCCc
Confidence 67889999999999999995444
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=277.60 Aligned_cols=235 Identities=18% Similarity=0.258 Sum_probs=183.7
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|.||++.. .+++.+++|++.... ....+.+.+|+.++++++|+||+++++++...+ ..++|+||
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~--~~~~v~e~ 97 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD--ELWVVMEF 97 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccc-----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC--eEEEEEec
Confidence 6999999999999986 478899999875432 223456889999999999999999999998777 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.++++|||++.........
T Consensus 98 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~ 171 (285)
T cd06648 98 LEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR 171 (285)
T ss_pred cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc
Confidence 999999999865 3589999999999999999999998 9999999999999999999999999988754422111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+......++.++|||||||+++||++|+.||........ ......... +... ....
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~---~~~~~~~~~-------~~~~-~~~~ 240 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA---MKRIRDNLP-------PKLK-NLHK 240 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH---HHHHHhcCC-------CCCc-cccc
Confidence 11123333344568899999999999999999999976432222 222211110 0000 0111
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....+.+++.+||+.+|++||++.++++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 2367899999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-32 Score=291.69 Aligned_cols=240 Identities=17% Similarity=0.211 Sum_probs=178.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||++... +++.||||++..... ........+..|++++.+++|+||+++++++.+.+ ..++||||
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~--~~~lv~E~ 82 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR--NLYLIMEF 82 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEeC
Confidence 78999999999999875 688999998864321 11334567889999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 83 ~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 83 LPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred CCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 9999999998643 3689999999999999999999998 999999999999999999999999999875431100
Q ss_pred ------------------------------------------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCC
Q 005734 547 ------------------------------------------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 547 ------------------------------------------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~ 584 (680)
.....|+......++.++|||||||++|||+||+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 00111222223456788999999999999999999997
Q ss_pred ccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 005734 585 EEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT---MNDIIVQ 648 (680)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt---m~ev~~~ 648 (680)
......... ......... .+.+.. ....++.+++.+|+. +|.+|++ ++|+.+.
T Consensus 238 ~~~~~~~~~---~i~~~~~~~--~~p~~~-----~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 238 SETPQETYR---KVMNWKETL--VFPPEV-----PISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCHHHHHH---HHHcCCCce--ecCCCC-----CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 654322222 221111100 011110 112467777877664 9999995 5666644
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.2e-32 Score=278.22 Aligned_cols=250 Identities=17% Similarity=0.189 Sum_probs=183.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|+.. ++..+|+|+.+..... .......+|+.++.++. |+|++++++++.+......++|+
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS----LEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCC----chhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 468999999999999964 6889999987643211 11234557899999985 99999999999877222679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||++ |+|.+++.... ..++|.++..++.+++.||+|||+. +++||||||+||++++ +.+||+|||+++......
T Consensus 80 e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 80 ELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred ecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 9996 68888886433 4689999999999999999999998 9999999999999999 999999999998764322
Q ss_pred Ccc-------cccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC----------ccc
Q 005734 546 KVS-------DDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN----------FSC 607 (680)
Q Consensus 546 ~~~-------~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~ 607 (680)
... ...|+.. .....+.++|||||||++|||++|+.||......+...+.......+.. ...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN 233 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence 111 1123322 2234678899999999999999999999765544443433332221110 000
Q ss_pred ccCc-----ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDP-----SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~-----~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...+ .+.........++.+++.+|++.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000 000111234578999999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=272.21 Aligned_cols=239 Identities=18% Similarity=0.248 Sum_probs=183.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|.||+|... ++..+++|.+...... +...+.+..|++++++++|+||+++++++...+ ..++|+||
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 80 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND---PKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE--KVYIFMEY 80 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc---hHHHHHHHHHHHHHHhCCCCChhheeeeEecCC--EEEEEEec
Confidence 68999999999999874 7889999998765432 345678999999999999999999999988776 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++... ..+++..+..|+.++++||+|||+. +|+|+||||+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999643 3588999999999999999999998 9999999999999999999999999998876532211
Q ss_pred c------------cccccCCCCC---CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 548 S------------DDIENSVLPP---LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 548 ~------------~~~~~~~~~~---~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
. ...|+..... ..+.++||||||++++|+++|+.||...... ........... .+.
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~-------~~~ 226 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE--FQIMFHVGAGH-------KPP 226 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch--HHHHHHHhcCC-------CCC
Confidence 1 1112222222 2678899999999999999999999654211 11111111110 011
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.. .......+.+++.+||+.+|++||++.|++.
T Consensus 227 ~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 227 IPD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCc-ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 110 0112356789999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=285.00 Aligned_cols=244 Identities=16% Similarity=0.227 Sum_probs=180.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. +++.||||++..... ......+.|.+|+.++..++|+||+++++++.+++ ..++|||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 81 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LKRAETACFREERDVLVNGDRRWITNLHYAFQDEN--NLYLVMD 81 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC--eEEEEEe
Confidence 478999999999999975 688999999864221 11233456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 82 YYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred cCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 99999999999642 34689999999999999999999998 999999999999999999999999999876543221
Q ss_pred cc----cccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 547 VS----DDIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 547 ~~----~~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.. ...+.+..| ..++.++|||||||++|||++|+.||..... .+............. +.+.
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~---~~~~~~i~~~~~~~~--~~~~ 232 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL---VETYGKIMNHKEHFQ--FPPD 232 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH---HHHHHHHHcCCCccc--CCCc
Confidence 11 111222222 3457789999999999999999999975432 222222222211111 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcccc--CCCCCCCHHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKT--DLRQRPTMNDIIVQ 648 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~--~P~~RPtm~ev~~~ 648 (680)
. ......+.+++.+|+.. ++..||+++++++.
T Consensus 233 ~----~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 233 V----TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred c----CCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1 11235677888876644 44448899998876
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=282.61 Aligned_cols=240 Identities=13% Similarity=0.182 Sum_probs=184.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|+||++... +++.+|+|.+....... ....+.+..|++++++++|+||+++++++.+.. ..++||||
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e~ 82 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK--RNKVKRVLTEQEILATLDHPFLPTLYASFQTET--YLCLVMDY 82 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch--HHHHHHHHHHHHHHHhCCCCCchhheeeeecCC--EEEEEEEe
Confidence 78999999999999975 58999999887543221 234567899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++.......+++..+..++.++++||+|||.. +++||||||+||+++.++.++|+|||++.........
T Consensus 83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 9999999999765556799999999999999999999998 9999999999999999999999999998765321100
Q ss_pred c-------------------------------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc
Q 005734 548 S-------------------------------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS 590 (680)
Q Consensus 548 ~-------------------------------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~ 590 (680)
. ...|+.......+.++||||||+++|||++|+.||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 0 011222223446778999999999999999999997543221
Q ss_pred HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCC----HHHHHH
Q 005734 591 IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT----MNDIIV 647 (680)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt----m~ev~~ 647 (680)
.............. .......+.+++.+|++.+|++||+ ++|+++
T Consensus 240 ---~~~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 240 ---TFSNILKKEVTFPG---------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ---HHHHHhcCCccCCC---------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 11112211111110 0113468999999999999999999 555554
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=281.83 Aligned_cols=248 Identities=18% Similarity=0.225 Sum_probs=188.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. +|..+|+|++...... ..+....+.+|++++++++|+|+|+++++|.++. ..++|||
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 105 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ--SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH--TAWLVME 105 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC--chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--eEEEEEe
Confidence 478999999999999974 6889999988643222 1234567899999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++ |+|.+.+... ...++|.++..++.+++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 106 ~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (317)
T cd06635 106 YCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS 180 (317)
T ss_pred CCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCccc
Confidence 996 5888877533 34689999999999999999999998 999999999999999999999999999876543221
Q ss_pred cc----cccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 VS----DDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 ~~----~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.. ...|+.. .....+.++|||||||++|||++|+.||......... ........ .. .....
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~---~~~~~~~~--~~-------~~~~~ 248 (317)
T cd06635 181 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL---YHIAQNES--PT-------LQSNE 248 (317)
T ss_pred ccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHH---HHHHhccC--CC-------CCCcc
Confidence 11 1123332 2345688899999999999999999998654322211 11111100 00 00112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
....+.+++.+|++.+|++||++.+|++.+.......
T Consensus 249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 249 WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred ccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 3357889999999999999999999998776654444
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-32 Score=280.68 Aligned_cols=243 Identities=20% Similarity=0.347 Sum_probs=185.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+++.. +++.+|+|++....... .......+|+.++++++|+||+++++++.+.. ..++|||
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~v~~ 78 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE---EEREENIREIKILRRLRHPNIVQILDVFQDDN--YLYIVME 78 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH---HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS--EEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc---cccchhhhhhhccccccccccccccccccccc--ccccccc
Confidence 478999999999999986 56689999987654322 22334456999999999999999999999876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
|+++++|.+++. ....+++..+..++.++++||+|||+. +|+||||||+||++++++.++|+|||.+.......
T Consensus 79 ~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 79 YCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp EETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred cccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 999999999997 234689999999999999999999998 99999999999999999999999999987532111
Q ss_pred -------CcccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 -------KVSDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 -------~~~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
......|+... ....+.++||||+|++++||++|+.||......+............. ..... ..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~ 226 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPL------PSSSQ-QS 226 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHH------HHHTT-SH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccc------ccccc-cc
Confidence 01112244444 56778899999999999999999999986522222222222221100 00000 00
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+++.+|++.+|++||++.++++
T Consensus 227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 227 REKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred chhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 011268999999999999999999999975
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-32 Score=292.43 Aligned_cols=241 Identities=14% Similarity=0.211 Sum_probs=174.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. ++..||+|+.... ....|+.++++++|+|||++++++.... ..++|+||
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----------~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 138 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----------TTLIEAMLLQNVNHPSVIRMKDTLVSGA--ITCMVLPH 138 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcc-----------ccHHHHHHHHhCCCCCCcChhheEEeCC--eeEEEEEc
Confidence 89999999999999975 5678898864322 2356899999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+ .|+|.+++... ...++|..+.+|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 139 ~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 213 (357)
T PHA03209 139 Y-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF 213 (357)
T ss_pred c-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCccc
Confidence 9 56999988643 34689999999999999999999998 999999999999999999999999999975432111
Q ss_pred ------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-----------HHHHHHHHhcCCCCccc--
Q 005734 547 ------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS-----------IEKWAADYLNEPRNFSC-- 607 (680)
Q Consensus 547 ------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~-- 607 (680)
.....|+......++.++|||||||++|||+++..|+....+.. +...+......+..+..
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 293 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDP 293 (357)
T ss_pred ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCC
Confidence 11223454445567899999999999999999666553221111 11111111111111110
Q ss_pred -------ccC-cccC-----CC----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 -------MID-PSLK-----SF----KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 -------~~d-~~l~-----~~----~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.++ .... .+ .........+++.+|++.||++|||+.||++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 000 0000 00 0011235567999999999999999999986
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=8e-32 Score=285.77 Aligned_cols=244 Identities=14% Similarity=0.183 Sum_probs=180.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. +++.||+|++..... ........+..|+.++..++|+||+++++++.+.+ ..++|||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~--~~~lv~E 81 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM--LKRAETACFREERNVLVNGDCQWITTLHYAFQDEN--YLYLVMD 81 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--EEEEEEe
Confidence 378999999999999975 678899998864221 11233456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 y~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 82 YYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred CCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 99999999999743 24689999999999999999999998 999999999999999999999999999977643221
Q ss_pred cc----cccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 547 VS----DDIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 547 ~~----~~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.. ...+.+.+| ..++.++|||||||++|||+||+.||..... .+............. +.+.
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~~~~~~i~~~~~~~~--~p~~ 232 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL---VETYGKIMNHEERFQ--FPSH 232 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH---HHHHHHHHcCCCccc--CCCc
Confidence 11 111222222 3467889999999999999999999975432 222222222211110 1111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQ--RPTMNDIIVQ 648 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~--RPtm~ev~~~ 648 (680)
+. ....++.+++.+|+..++++ |++++++.+.
T Consensus 233 ~~----~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 233 IT----DVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred cc----cCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11 12357888999988765544 4678888754
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=271.55 Aligned_cols=240 Identities=16% Similarity=0.257 Sum_probs=190.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+++.. +++.|+||++...... .....+.+|++.+.+++|+|++++++++...+ ..++|+|
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~lv~e 79 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE----EFRKQLLRELKTLRSCESPYVVKCYGAFYKEG--EISIVLE 79 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch----HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC--eEEEEEE
Confidence 489999999999999986 5899999988665421 34567999999999999999999999998876 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|+++++|.+++... ..+++..+++++.++++|++|||+ . +++||||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 80 YMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred ecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 99999999999644 468999999999999999999999 7 99999999999999999999999999988765322
Q ss_pred Ccc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...|+.......+.++||||||+++|||+||+.||.........+.......... + ..+
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~---~~~ 224 (264)
T cd06623 155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP-------P---SLP 224 (264)
T ss_pred CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC-------C---CCC
Confidence 211 1123444445667889999999999999999999976532122232222222110 0 111
Q ss_pred HH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QN-ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~-~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.. ....+.+++.+|++.+|++||++.++++.
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11 34688999999999999999999999873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.2e-32 Score=289.24 Aligned_cols=249 Identities=12% Similarity=0.198 Sum_probs=180.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||++... .++.||||++...... ......+.+|+.+++.++||||+++++++..... ...++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~l 106 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI 106 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccC---chhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEE
Confidence 78999999999999864 6888999988643211 2334568899999999999999999998764321 14689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 107 v~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 107 VMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred EEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 9999964 7777774 2478999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC--------------
Q 005734 544 KSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-------------- 602 (680)
Q Consensus 544 ~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-------------- 602 (680)
.... ....|+......++.++|||||||++|||+||+.||...........+......+
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (364)
T cd07875 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258 (364)
T ss_pred CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHH
Confidence 2111 1122333344567889999999999999999999997644322222111111100
Q ss_pred -----CCcccc----cCccc-----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 -----RNFSCM----IDPSL-----KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 -----~~~~~~----~d~~l-----~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...... ..+.. .........++.+++.+|++.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 00000 00011123578899999999999999999999875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=277.48 Aligned_cols=238 Identities=16% Similarity=0.257 Sum_probs=180.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC----CCceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~----~~~~~ 462 (680)
+.||+|+||.||+|.. .+++.+|+|+..... ....++..|+.++.++ +|+||+++++++.... ....+
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE------DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCh------HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 7999999999999997 468899999875432 2345688899999999 6999999999986421 12579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
++|||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++...
T Consensus 96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~ 172 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172 (282)
T ss_pred EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence 999999999999999765556789999999999999999999998 99999999999999999999999999987653
Q ss_pred CCCCc--------ccccccCCC-----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccccc
Q 005734 543 PKSKV--------SDDIENSVL-----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 543 ~~~~~--------~~~~~~~~~-----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (680)
..... ....|+... ...++.++|||||||++|||+||+.||....+.... ...... .
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~---~~~~~~-~------ 242 (282)
T cd06636 173 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL---FLIPRN-P------ 242 (282)
T ss_pred ccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh---hhHhhC-C------
Confidence 21110 011222211 234567899999999999999999999654321111 111111 0
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.+ .......++.+++.+||+.+|.+||++.|+++
T Consensus 243 ~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 243 PPKL--KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CCCC--cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0000 01123467899999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=273.98 Aligned_cols=241 Identities=17% Similarity=0.265 Sum_probs=188.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||++... +++.+++|.+..... ....+++.+|++++++++||||+++++++...+ ..++|+|
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~lv~e 79 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN----EAIQKQILRELDILHKCNSPYIVGFYGAFYNNG--DISICME 79 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC----hHHHHHHHHHHHHHHHCCCCchhhhheeeecCC--EEEEEEE
Confidence 478999999999999986 688999998865432 234567899999999999999999999998876 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|+++++|.+++.... ..++.....+++.+++.||+|||+ . +++||||||+||++++++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 80 YMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred ecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 999999999996543 578999999999999999999998 6 99999999999999999999999999987653211
Q ss_pred C------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc--cccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 K------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK--ELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. .....|+.......+.++||||||++++||++|+.||.... .....+.+........ +.+. .
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~ 226 (265)
T cd06605 156 AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP-------PRLP--S 226 (265)
T ss_pred hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC-------CCCC--h
Confidence 1 11122444444567889999999999999999999996532 1223333333322211 0000 0
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+++.+||..+|++|||+.+++.
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 227 GKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 113467889999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=277.96 Aligned_cols=250 Identities=15% Similarity=0.217 Sum_probs=187.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|+.. +|..|+||++...... ......+.+|++++++++|+||+++++++..+. ..++|+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~e 79 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE---GGIPNQALREIKALQACQHPYVVKLLDVFPHGS--GFVLVME 79 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEccccc---chhhHHHHHHHHHHHhCCCCCCcceeeEEecCC--eeEEEec
Confidence 478999999999999974 7899999998754321 233467899999999999999999999998876 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+ +++|.+++.... ..+++.++.+++.++++||+|||+. +++|+||||+||++++++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 99 999999986443 5699999999999999999999998 999999999999999999999999999887653221
Q ss_pred ----cc-----cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC-----------c
Q 005734 547 ----VS-----DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN-----------F 605 (680)
Q Consensus 547 ----~~-----~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~-----------~ 605 (680)
.. ...|+... ....++++||||+|++++||+||+.||....+......+......+.. .
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY 234 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence 01 11123221 223578899999999999999998887654433333333222221100 0
Q ss_pred ccccCcc-----cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 606 SCMIDPS-----LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 606 ~~~~d~~-----l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+..+. +.....+....+.+++.+|++.+|++||++++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000 00011123478899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-31 Score=271.46 Aligned_cols=232 Identities=17% Similarity=0.228 Sum_probs=180.3
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
||.|++|.||+++.. ++..+++|++....... ....+.+.+|++++++++|+||+++++++.++. ..++|+||++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~ 76 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE--TGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK--YIYMLMEYCL 76 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh--hhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC--ccEEEEecCC
Confidence 699999999999985 58899999886543221 234567999999999999999999999998877 6799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc--
Q 005734 470 NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV-- 547 (680)
Q Consensus 470 ~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~-- 547 (680)
+|+|.+++... ..+++..+..++.+++.||+|||+. +++|+||||+||++++++.++|+|||+++........
T Consensus 77 ~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~ 151 (262)
T cd05572 77 GGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT 151 (262)
T ss_pred CCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccc
Confidence 99999999643 3589999999999999999999997 9999999999999999999999999999876532110
Q ss_pred -----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 548 -----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 548 -----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
....|+......++.++||||||+++|||++|+.||..... +..+............ ..+.....
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~ 221 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-DPMEIYNDILKGNGKL---------EFPNYIDK 221 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-CHHHHHHHHhccCCCC---------CCCcccCH
Confidence 11123333334567889999999999999999999975442 2233333322111110 11112246
Q ss_pred HHHHHHHHccccCCCCCCC
Q 005734 623 AICEVIKECIKTDLRQRPT 641 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RPt 641 (680)
++.+++.+||+.+|++||+
T Consensus 222 ~~~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 222 AAKDLIKQLLRRNPEERLG 240 (262)
T ss_pred HHHHHHHHHccCChhhCcC
Confidence 8899999999999999999
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=273.03 Aligned_cols=244 Identities=14% Similarity=0.221 Sum_probs=186.6
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchh-hHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKD-WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~-~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|++|.||++.. .++..+|+|++....... ......+.+.+|++++++++|+||+++++++.+.+ ..++|+
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~v~ 82 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS--HFNLFV 82 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC--eEEEEE
Confidence 37899999999999986 578999999886543221 12234568999999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPK 544 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~ 544 (680)
||+++++|.+++... ..+++..+.+++.+++.||+|||+. +++||||||+||+++.++ .+||+|||.+......
T Consensus 83 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 83 EWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred eccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 999999999999643 3689999999999999999999998 999999999999998775 5999999998776532
Q ss_pred CCc------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 545 SKV------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 545 ~~~------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
... ....|+.......+.++||||+|++++||++|+.||.................... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------~-- 229 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT------A-- 229 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC------C--
Confidence 111 11123333334567889999999999999999999964332222222221111100 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...+.....++.+++.+|+..+|++||++.++++
T Consensus 230 -~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 -PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1122233467889999999999999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-32 Score=288.77 Aligned_cols=232 Identities=13% Similarity=0.219 Sum_probs=186.0
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 464 (680)
|..+||+|+||+|+.+.++ +++.+|||++++...-. .+..+..+.|.+++.-. +||.++.|+++++..+ +.+.|
T Consensus 372 ~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~--~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~--~l~fv 447 (694)
T KOG0694|consen 372 LLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ--RDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE--HLFFV 447 (694)
T ss_pred EEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceec--cccHHHHHHHHHHHHHhccCCeEeecccccccCC--eEEEE
Confidence 3499999999999999985 67899999998765432 34566778888888777 5999999999999888 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+.+|++..+.+ ...++..+..-+|..|+.||+|||++ +||+||||-+|||||.+|.+||+|||+++.....
T Consensus 448 mey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 448 MEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCC
Confidence 99999999666554 34689999999999999999999999 9999999999999999999999999999986522
Q ss_pred CCcc---cccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKVS---DDIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~~---~~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.... -..|++.+| ..|+...|-|||||+||||++|..||.++++.++.+- .+.+... +
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fds---I~~d~~~-----------y 587 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDS---IVNDEVR-----------Y 587 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH---HhcCCCC-----------C
Confidence 2222 223455444 4678889999999999999999999997765554433 2222111 2
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....+...|+.+.+..+|++|.-+
T Consensus 588 P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 588 PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCcccHHHHHHHHHHhccCcccccCC
Confidence 22334688899999999999999977
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-32 Score=276.47 Aligned_cols=239 Identities=18% Similarity=0.212 Sum_probs=182.8
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
||.|+||.||+++.. +|+.+++|++...... .+.....+.+|++++.+++|+||+++++.+..+. ..++|+||++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--~~~lv~e~~~ 76 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI--RKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK--NLYLVMEYLP 76 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhh--hhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc--EEEEEEecCC
Confidence 689999999999986 4899999988654321 1345667899999999999999999999988776 6799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc--
Q 005734 470 NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV-- 547 (680)
Q Consensus 470 ~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~-- 547 (680)
+++|.+++.... .+++..+.+++.|+++||+|||+. +++||||+|+||++++++.++|+|||++.........
T Consensus 77 ~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 151 (265)
T cd05579 77 GGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL 151 (265)
T ss_pred CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc
Confidence 999999996433 689999999999999999999988 9999999999999999999999999998765432110
Q ss_pred ------c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 548 ------S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 548 ------~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
. ...|+.......+.++||||||++++|++||+.||........... ...........
T Consensus 152 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~----- 223 (265)
T cd05579 152 NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQN---ILNGKIEWPED----- 223 (265)
T ss_pred ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HhcCCcCCCcc-----
Confidence 0 1112222233467789999999999999999999975443222222 21111100000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
......+.+++.+|++.+|++|||+.++.+.|+
T Consensus 224 ----~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 224 ----VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ----ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 001367899999999999999999955555443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=306.82 Aligned_cols=244 Identities=15% Similarity=0.229 Sum_probs=182.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
...||+|+||+||++... ++..+|+|++...... ......|..|+.++.+++|||||++++++.+......+||||
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~---e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVME 94 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK---EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILME 94 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC---HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEe
Confidence 389999999999999975 5678899988654322 234567899999999999999999999886544335789999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC----CCeeecCCCCCCeeecC--------------
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELN----PPVAHSNLSSHCIYLTD-------------- 526 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~----~~ivHrDlKp~NILld~-------------- 526 (680)
|+++|+|.++|... ....+++...+.|+.||+.||+|||+... .+||||||||+||||+.
T Consensus 95 Y~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n 174 (1021)
T PTZ00266 95 FCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANN 174 (1021)
T ss_pred CCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccc
Confidence 99999999999643 23469999999999999999999998531 36999999999999964
Q ss_pred ---CCCeEEcccccccccCCCCCc-------ccccccCC--CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHH
Q 005734 527 ---DYAAKVAEICFTTIALPKSKV-------SDDIENSV--LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKW 594 (680)
Q Consensus 527 ---~~~~ki~DFGla~~~~~~~~~-------~~~~~~~~--~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~ 594 (680)
...+||+|||+++........ ....|+.. ....+++++|||||||++|||+||+.||..... ....
T Consensus 175 ~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~--~~ql 252 (1021)
T PTZ00266 175 LNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN--FSQL 252 (1021)
T ss_pred cCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc--HHHH
Confidence 235899999999876432111 11123322 123467899999999999999999999975432 2222
Q ss_pred HHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 595 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+......+ .+. +. ....++.+|+..||+.+|.+||++.+++.
T Consensus 253 i~~lk~~p-~lp------i~----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 253 ISELKRGP-DLP------IK----GKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHhcCC-CCC------cC----CCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 22221111 100 01 12357889999999999999999999984
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=275.41 Aligned_cols=239 Identities=13% Similarity=0.131 Sum_probs=175.5
Q ss_pred ccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHH---HcCCCCcccceeeEEecCCCCceEEEE
Q 005734 390 IIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL---SRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+||+|+||.||++... +|+.+|||.+....... ......+..|..++ ...+|+||+.+.+++...+ ..++||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~ 76 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD--KLCFIL 76 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEcccccc--chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC--eEEEEE
Confidence 4899999999999974 68899999886543221 11122344444433 3447999999999998777 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..++|.....|+.|++.||+|||+. +|+||||||+||++++++.++++|||++.......
T Consensus 77 e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~ 151 (279)
T cd05633 77 DLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 151 (279)
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC
Confidence 999999999998643 3699999999999999999999998 89999999999999999999999999987543211
Q ss_pred Cc------ccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 KV------SDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ~~------~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ....|+... ...++.++|||||||+++||+||+.||.......... +...... .+. ..+.
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~-------~~~---~~~~ 220 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT-------VNV---ELPD 220 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHHhhc-------CCc---CCcc
Confidence 11 111233322 2346788999999999999999999997543222222 1111111 001 1122
Q ss_pred HHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
....++.+++.+|++.+|++|| +++|+++.
T Consensus 221 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 221 SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 2346788999999999999999 58888774
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=273.47 Aligned_cols=239 Identities=16% Similarity=0.163 Sum_probs=185.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||.|+||.||+++.. ++..+|+|.+...... .....+.+.+|++++++++||||+++++++.++. ..++|+|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 80 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCV--EKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE--NMYLVVD 80 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhc--chhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC--eEEEEEe
Confidence 478999999999999985 6899999988643311 1234568999999999999999999999998776 6899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++.....++.++++||+|||+. +++|+||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc
Confidence 99999999999654 4789999999999999999999988 999999999999999999999999999877643311
Q ss_pred cc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 VS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 ~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.. ...|+.......+.++||||||+++|||++|+.||.................... ..+..
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 224 (258)
T cd05578 156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV-----------LYPAT 224 (258)
T ss_pred ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccc-----------cCccc
Confidence 11 1123333344568899999999999999999999976542212222221111111 11122
Q ss_pred HHHHHHHHHHHccccCCCCCCCH--HHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTM--NDII 646 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm--~ev~ 646 (680)
....+.+++.+||+.+|.+||++ +|+.
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 225 WSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred CcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 33688899999999999999999 5543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.7e-32 Score=278.93 Aligned_cols=250 Identities=15% Similarity=0.246 Sum_probs=184.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|... +++.|+||++...... ......+.+|++++++++|+||+++++++..++ ..++|||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~iv~e 80 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD---EDVKKTALREVKVLRQLRHENIVNLKEAFRRKG--RLYLVFE 80 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc---ccchhHHHHHHHHHHhcCCCCeeehhheEEECC--EEEEEEe
Confidence 478999999999999975 5789999987643321 233467899999999999999999999998876 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++++.+..+... ...+++.....++.+++.||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9998777665543 24589999999999999999999998 999999999999999999999999999887654321
Q ss_pred --cc-------cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC-C----------CC-
Q 005734 547 --VS-------DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE-P----------RN- 604 (680)
Q Consensus 547 --~~-------~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~-~----------~~- 604 (680)
.. ...|+..... ..+.++||||||+++|||++|+.||......+........... . ..
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 00 1123333333 6678899999999999999999999754332222111111110 0 00
Q ss_pred ----cccccCcc-cC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 605 ----FSCMIDPS-LK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 605 ----~~~~~d~~-l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+....++. +. .++.....++.+++.+||..+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000 00 111223578999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=279.59 Aligned_cols=237 Identities=18% Similarity=0.314 Sum_probs=183.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++.. .++..|++|.+.... ......+..|+.++++++||||+++++++...+ ..++|+|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--~~~lv~e 96 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-----QPKKELIINEILVMRENKHPNIVNYLDSYLVGD--ELWVVME 96 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-----chHHHHHHHHHHHHhhcCCCCeeehhheeeeCC--cEEEEEe
Confidence 47899999999999986 467889999875432 123456889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... .+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 97 YLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred cCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 99999999998642 478999999999999999999998 999999999999999999999999998876543221
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+......++.++|||||||++||+++|+.||........... ...... +.. ....
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~---~~~~~~-------~~~-~~~~ 239 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGT-------PEL-QNPE 239 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee---hhcCCC-------CCC-CCcc
Confidence 11 1223433344568899999999999999999999975432111110 000000 000 0112
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+.+++.+||+.+|++||++.+++.+
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 233578899999999999999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=274.93 Aligned_cols=239 Identities=21% Similarity=0.308 Sum_probs=182.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC----CCceE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~----~~~~~ 462 (680)
+.||+|++|.||+|... +++.+++|++.... ....+|.+|+++++++ +|+||+++++++.... ....+
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE------DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCc------hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 89999999999999985 67889999876543 1245789999999999 6999999999997644 22479
Q ss_pred EEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 463 MVFEYAPNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||+|+||++++++.+|++|||++..
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcccee
Confidence 9999999999999986433 45789999999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCCcc--------cccccCCC-----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 541 ALPKSKVS--------DDIENSVL-----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 541 ~~~~~~~~--------~~~~~~~~-----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
........ ...|+... ...++.++|||||||+++||+||+.||....... ......... .
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~--~-- 235 (275)
T cd06608 163 LDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR---ALFKIPRNP--P-- 235 (275)
T ss_pred cccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH---HHHHhhccC--C--
Confidence 54221111 11122211 2345778999999999999999999996432211 111111110 0
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.+. .......++.+++.+|+..||++|||+.++++
T Consensus 236 ---~~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 236 ---PTLK-SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ---CCCC-chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1111 11223467889999999999999999999985
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.6e-33 Score=281.72 Aligned_cols=236 Identities=17% Similarity=0.269 Sum_probs=188.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||||.. ..++.||+|++..... +....+..+|+.+|..++|+||.+++|.+..+. ..+++|||
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~----~deIediqqei~~Ls~~~~~~it~yygsyl~g~--~LwiiMey 92 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA----EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT--KLWIIMEY 92 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhc----chhhHHHHHHHHHHHhcCcchHHhhhhheeecc--cHHHHHHH
Confidence 7899999999999996 4788999999987653 345677889999999999999999999999887 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|.+|++.+.+... ..++.....-|..++..||.|||++ +.+|||||+.|||+..+|.+|++|||.+-.+......
T Consensus 93 ~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred hcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence 9999999999643 3447777777899999999999999 9999999999999999999999999999777643222
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+......++.|+||||+|++.+||.+|.+|+.+..+....-.+ . +. -.|.+. ..
T Consensus 168 r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI----p--k~----~PP~L~---~~ 234 (467)
T KOG0201|consen 168 RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI----P--KS----APPRLD---GD 234 (467)
T ss_pred cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec----c--CC----CCCccc---cc
Confidence 1 12234444457899999999999999999999999765432111000 0 11 112221 23
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.+++..|+..+|+.||++.++++.
T Consensus 235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 235 FSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 34679999999999999999999999864
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-31 Score=273.80 Aligned_cols=240 Identities=15% Similarity=0.257 Sum_probs=176.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHH-HHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDT-LSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +|..||+|++...... ....++..|+.. ++..+|+||+++++++..++ ..++||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~--~~~lv~ 79 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS----QEQKRLLMDLDISMRSVDCPYTVTFYGALFREG--DVWICM 79 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc----HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC--cEEEEh
Confidence 378999999999999975 6899999988654321 123445566665 56668999999999998877 679999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 466 EYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 466 ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||++ |+|.+++... ....+++...++++.|++.||+|||+.+ +++||||||+||+++.++.+||+|||+++....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9996 6888887542 2357899999999999999999999753 799999999999999999999999999886542
Q ss_pred CCCcc-------cccccCCCC----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS-------DDIENSVLP----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+.... ..++.++||||||+++|||++|+.||.... ... +.......... +.
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~-~~~~~~~~~~~-------~~ 227 (283)
T cd06617 157 SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK-TPF-QQLKQVVEEPS-------PQ 227 (283)
T ss_pred ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc-cCH-HHHHHHHhcCC-------CC
Confidence 21111 112332211 335788999999999999999999996432 111 11111111100 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+. ....+.++.+++.+||..+|++||++.++++
T Consensus 228 ~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 228 LP--AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CC--ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 10 0112357889999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=291.27 Aligned_cols=243 Identities=16% Similarity=0.200 Sum_probs=177.4
Q ss_pred ccccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
...||+|+||.||++... .+..|+||.+... +.+.+|++++++++|||||++++++.... ..++|
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----------~~~~~E~~il~~l~h~~iv~~~~~~~~~~--~~~lv 164 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----------KTPGREIDILKTISHRAIINLIHAYRWKS--TVCMV 164 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCccceeEEEEecccc----------ccHHHHHHHHHhcCCCCccceeeeEeeCC--EEEEE
Confidence 378999999999999753 4577888877432 23568999999999999999999998776 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+. ++|.+++. ....++|..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 165 ~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 165 MPKYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred ehhcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 99995 68998883 334799999999999999999999998 9999999999999999999999999999765432
Q ss_pred CCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc----HHHHHHHHhcCCCCccc---
Q 005734 545 SKV----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS----IEKWAADYLNEPRNFSC--- 607 (680)
Q Consensus 545 ~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~----~~~~~~~~~~~~~~~~~--- 607 (680)
... ....|+......++.++|||||||++|||++|+.||.+..... +...+......+..+..
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 111 1112333334456788999999999999999999996543221 11111111101000000
Q ss_pred ------------ccCcccC--CC--CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 608 ------------MIDPSLK--SF--KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 608 ------------~~d~~l~--~~--~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+... .. ......++.+++.+|+..||++||++.|++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 00 01123467889999999999999999999874
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-31 Score=282.74 Aligned_cols=256 Identities=15% Similarity=0.205 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|... +|..+|||++...... ......+.+|+.++.++ +|+||++++++|...+....++||
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN---ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVF 88 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc---chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEe
Confidence 378999999999999975 6888999987532211 12344677899999999 999999999998765433579999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||++ ++|.+++... .++|..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 89 e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 89 EYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred cccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 9997 5999888643 689999999999999999999998 99999999999999999999999999998765322
Q ss_pred Cc----c---------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--------
Q 005734 546 KV----S---------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-------- 603 (680)
Q Consensus 546 ~~----~---------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-------- 603 (680)
.. . ...|+... ....+.++||||||+++|||+||+.||...........+........
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence 11 0 01122211 23456789999999999999999999965432222221111111000
Q ss_pred --CcccccC----c---ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 604 --NFSCMID----P---SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 604 --~~~~~~d----~---~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
....+++ . ...........++.+++.+||+.+|++|||+.++++. ++...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 0000000 0 0001111234678999999999999999999999975 44443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=285.06 Aligned_cols=249 Identities=16% Similarity=0.212 Sum_probs=196.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CC-----cccceeeEEecCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HK-----NFVNLIGYCEDDEPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~~~~~ 460 (680)
.++||+|+||.|-||.. .+++.||||+++.+ +...++-..|+.+|..++ |. |+|+++.|+...+ +
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~------k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~--H 262 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK------KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN--H 262 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccC------hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc--c
Confidence 38999999999999985 57999999999764 234556778999999996 43 8999999999988 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC--CCeEEcccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD--YAAKVAEICFT 538 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~--~~~ki~DFGla 538 (680)
.|||+|.+.. +|.+++..+....++......|+.||+.||.+||.. +||||||||+||||-+- ..+||+|||.+
T Consensus 263 lciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 263 LCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccc
Confidence 8999999955 999999988888899999999999999999999988 99999999999999643 47999999999
Q ss_pred cccCCCCC-----cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--------Cc
Q 005734 539 TIALPKSK-----VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--------NF 605 (680)
Q Consensus 539 ~~~~~~~~-----~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--------~~ 605 (680)
........ .....||...+..++.+.||||||||+.||+||.+-|.++.+.+....+.+.+..+. ..
T Consensus 339 c~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~ 418 (586)
T KOG0667|consen 339 CFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKA 418 (586)
T ss_pred cccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccc
Confidence 88764322 123446777788899999999999999999999888888776666555555443221 00
Q ss_pred ccccCc-------------------------------------ccCC---C-CHHHHHHHHHHHHHccccCCCCCCCHHH
Q 005734 606 SCMIDP-------------------------------------SLKS---F-KQNELEAICEVIKECIKTDLRQRPTMND 644 (680)
Q Consensus 606 ~~~~d~-------------------------------------~l~~---~-~~~~~~~~~~l~~~C~~~~P~~RPtm~e 644 (680)
...++. .... . ....-..+.+++++|+..||.+|+|..+
T Consensus 419 ~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~q 498 (586)
T KOG0667|consen 419 HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQ 498 (586)
T ss_pred ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHH
Confidence 001111 0000 0 0022357899999999999999999999
Q ss_pred HHHH
Q 005734 645 IIVQ 648 (680)
Q Consensus 645 v~~~ 648 (680)
+++.
T Consensus 499 al~H 502 (586)
T KOG0667|consen 499 ALNH 502 (586)
T ss_pred HhcC
Confidence 9875
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-31 Score=278.83 Aligned_cols=252 Identities=17% Similarity=0.239 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC--------C
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE--------P 458 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--------~ 458 (680)
.+.||+|+||.||+|... +|+.||||++...... ......+.+|++++++++||||+++++++.+.. .
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK---EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDK 88 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccc---cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccC
Confidence 489999999999999985 6889999988754322 122346788999999999999999999987643 1
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
...++|+||+++ ++.+.+... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 89 ~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 89 GAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred CcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCccccc
Confidence 257899999975 777777543 34689999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCCCcc---------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cc
Q 005734 539 TIALPKSKVS---------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FS 606 (680)
Q Consensus 539 ~~~~~~~~~~---------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 606 (680)
.......... ...|+... ....+.++|||||||+++||++|+.||...........+......+.. ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (302)
T cd07864 164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP 243 (302)
T ss_pred ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 8765322110 11122221 224578899999999999999999999765433333333332221110 00
Q ss_pred cc--------cCc------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 CM--------IDP------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ~~--------~d~------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+ .++ .+.......+..+.+++.+||+.+|++||++++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 000 000011123467899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=296.57 Aligned_cols=253 Identities=14% Similarity=0.198 Sum_probs=176.4
Q ss_pred hhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC------CcccceeeEEe
Q 005734 384 CEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH------KNFVNLIGYCE 454 (680)
Q Consensus 384 ~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H------~niv~l~g~~~ 454 (680)
+.+|. +.||+|+||+||+|... +++.||||++.... ...+++..|++++.+++| .+++++++++.
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 44454 89999999999999874 67889999985421 123345566777666654 45888999887
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC------
Q 005734 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY------ 528 (680)
Q Consensus 455 ~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~------ 528 (680)
.... ..++|||++ +++|.+++... ..+++..+..|+.||+.||+|||+.+ +|+||||||+|||++.++
T Consensus 202 ~~~~-~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 202 NETG-HMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred cCCc-eEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCcccccc
Confidence 6543 578999998 77899988643 46899999999999999999999732 899999999999998765
Q ss_pred ----------CeEEcccccccccCCCCCc-----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHH
Q 005734 529 ----------AAKVAEICFTTIALPKSKV-----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593 (680)
Q Consensus 529 ----------~~ki~DFGla~~~~~~~~~-----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~ 593 (680)
.+||+|||.+......... ....||......++.++|||||||++|||+||+.||+.....+...
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 355 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH 355 (467)
T ss_pred cccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 4999999987654322111 1222444444567889999999999999999999997654333322
Q ss_pred HHHHHhcCC--------------------CCcccccCcc-c---C--C-C-CHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 005734 594 WAADYLNEP--------------------RNFSCMIDPS-L---K--S-F-KQNELEAICEVIKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 594 ~~~~~~~~~--------------------~~~~~~~d~~-l---~--~-~-~~~~~~~~~~l~~~C~~~~P~~RPtm~ev 645 (680)
.+...+... ..+....++. + . . . .......+.+|+.+|++.||++|||++|+
T Consensus 356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~ 435 (467)
T PTZ00284 356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM 435 (467)
T ss_pred HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence 222221110 0000001110 0 0 0 0 00112457899999999999999999999
Q ss_pred HHH
Q 005734 646 IVQ 648 (680)
Q Consensus 646 ~~~ 648 (680)
++.
T Consensus 436 L~H 438 (467)
T PTZ00284 436 TTH 438 (467)
T ss_pred hcC
Confidence 873
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=272.88 Aligned_cols=253 Identities=16% Similarity=0.209 Sum_probs=183.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecCCC---Cc
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDDEP---FN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~---~~ 460 (680)
.+.||+|+||.||+|+.. ++..+|+|++...... ......+.+|++++.++ +|+|++++++++...+. ..
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE---EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEecccccc---chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 478999999999999986 4899999998754322 12234566787777666 59999999999987652 12
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+++|||+. ++|.+++.......++|..+.+++.++++||+|||+. +++|+||||+||++++++.+||+|||++..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCccee
Confidence 789999996 5899988754445699999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc-------
Q 005734 541 ALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS------- 606 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 606 (680)
........ ...|+.......+.++||||||++++||+||+.||......+....+......+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07838 157 YSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236 (287)
T ss_pred ccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence 64322111 1123333345568899999999999999999999876443322222222111111000
Q ss_pred ------cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 ------CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ------~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
............+....+.+++.+||+.||++||++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000001111233467789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=275.41 Aligned_cols=236 Identities=20% Similarity=0.272 Sum_probs=183.4
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||+|+||.||++.. .+|..||||++.... ......+.+|+.++++++|+|++++++++..++ ..++||||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 98 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 98 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC--EEEEEEec
Confidence 5799999999999987 478999999875432 223556899999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++.. ..+++.....++.+++.||+|||+. +++||||||+||++++++.++|+|||++.........
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~ 172 (292)
T cd06657 99 LEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 172 (292)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccc
Confidence 999999998743 2589999999999999999999998 9999999999999999999999999988765422111
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...++.......+.++|||||||+++||++|+.||...........+...... .+.. ...
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~----------~~~~-~~~ 241 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP----------KLKN-LHK 241 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc----------ccCC-ccc
Confidence 1 11233333345678999999999999999999999754333222222221111 1100 011
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.+++.+|++.+|.+||++.++++.
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 23567889999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=274.45 Aligned_cols=236 Identities=21% Similarity=0.265 Sum_probs=183.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||++... +++.+|+|++..... ........+.+|++++++++||||+++++++.+++ ..++|||
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e 81 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI--VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS--NLYLVME 81 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--eEEEEEe
Confidence 378999999999999975 689999998854321 11234567899999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 156 (290)
T cd05580 82 YVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTY 156 (290)
T ss_pred cCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCC
Confidence 99999999998644 4689999999999999999999998 999999999999999999999999999987654321
Q ss_pred cc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 VS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 ~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.. ...|+.......+.++||||||++++||+||+.||......... .........+ +....
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~-----------~~~~~ 222 (290)
T cd05580 157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIY---EKILEGKVRF-----------PSFFS 222 (290)
T ss_pred CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHhcCCccC-----------CccCC
Confidence 11 11233333345678899999999999999999999754422111 1222111111 11123
Q ss_pred HHHHHHHHHccccCCCCCC-----CHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRP-----TMNDII 646 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RP-----tm~ev~ 646 (680)
..+.+++.+||..+|++|| +++|++
T Consensus 223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred HHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 5788999999999999999 555555
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=276.70 Aligned_cols=252 Identities=13% Similarity=0.177 Sum_probs=183.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|+.. +++.+++|.++..... ......+.+|++++++++||||+++++++...+....++|+|
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e 86 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK---EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVME 86 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc---ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEeh
Confidence 378999999999999985 6889999988754322 222345778999999999999999999998763237899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++ ++|.+++.... ..+++..+.+++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 87 ~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 87 YVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred hcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 997 59999886443 3689999999999999999999998 999999999999999999999999999887653211
Q ss_pred -cc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC---------------
Q 005734 547 -VS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP--------------- 602 (680)
Q Consensus 547 -~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~--------------- 602 (680)
.. ...|+.... ...+.++||||||++++||++|+.||...........+......+
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 10 111222211 235788999999999999999999997543322222211111100
Q ss_pred -CCcccccCcccC-CCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 603 -RNFSCMIDPSLK-SFKQN-ELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 603 -~~~~~~~d~~l~-~~~~~-~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..........+. .++.. ....+.+++.+|++.+|++|||+.|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000010 11111 2467889999999999999999999985
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=276.11 Aligned_cols=243 Identities=17% Similarity=0.208 Sum_probs=180.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||++... +|..+|+|.+...... .....+.+|+.++.++. |+||+++++++..++ ..++++
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~--~~~~~~ 82 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE----KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG--DCWICM 82 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh----HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC--cEEEEE
Confidence 368999999999999974 6899999988644321 34567899999999996 999999999998766 679999
Q ss_pred EecCCCChhhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 466 EYAPNGTVFEHL---HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 466 ey~~~GsL~~~l---~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
||+. +++.++. .......+++....+++.+++.||+|||+.+ +++||||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred eccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9986 4655543 3233457999999999999999999999743 79999999999999999999999999987654
Q ss_pred CCCCc-------ccccccCCCCC---CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 543 PKSKV-------SDDIENSVLPP---LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 543 ~~~~~-------~~~~~~~~~~~---~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ....|+..... .+++++|||||||++|||+||+.||.... ...+.+........ +.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~-------~~ 230 (288)
T cd06616 160 DSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDP-------PI 230 (288)
T ss_pred cCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCC-------Cc
Confidence 22111 11223332222 56889999999999999999999996533 22222222221110 11
Q ss_pred cC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 613 LK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 613 l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+. ........++.+++.+||+.+|++|||+++|+..
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 1112344678999999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-31 Score=279.18 Aligned_cols=249 Identities=15% Similarity=0.211 Sum_probs=181.9
Q ss_pred cccCCC--CCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQ--SGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G--~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
..||+| +||+||++.. .+|+.||||++...... ....+.+.+|+.+++.++||||+++++++..++ ..++|+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT---EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS--WLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC--ceEEEE
Confidence 356766 8899999997 47999999988654322 233467899999999999999999999999877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.......
T Consensus 79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~ 155 (328)
T cd08226 79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNG 155 (328)
T ss_pred ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccC
Confidence 999999999998765445689999999999999999999988 99999999999999999999999998654332110
Q ss_pred Cc---------------ccccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--c-
Q 005734 546 KV---------------SDDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--F- 605 (680)
Q Consensus 546 ~~---------------~~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~- 605 (680)
.. ....|+.... ..+++++|||||||+++||++|+.||........ ....+..... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~ 232 (328)
T cd08226 156 QKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM---LLQKLKGPPYSPLD 232 (328)
T ss_pred ccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH---HHHHhcCCCCCCcc
Confidence 00 0112222211 2357889999999999999999999975431111 1111100000 0
Q ss_pred --------------------------------ccccCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 --------------------------------SCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 --------------------------------~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.+..+. .........+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000001111 1123455788999999999999999999999753
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=266.35 Aligned_cols=237 Identities=19% Similarity=0.287 Sum_probs=186.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|.||++... ++..+++|+...... .....+.+|++.+++++|+|++++++++.... ..++++||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~l~~e~ 78 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKD--ELWIVMEF 78 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEec
Confidence 78999999999999985 788999998865442 24567899999999999999999999998876 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
+++++|.+++.... ..+++..+..++.+++.||+|||.. +++||||+|+||++++++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 154 (253)
T cd05122 79 CSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKAR 154 (253)
T ss_pred CCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccccc
Confidence 99999999986543 4789999999999999999999997 99999999999999999999999999988765432
Q ss_pred Ccc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 546 KVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 546 ~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
... ...|+.......+.++||||||++++||++|+.||.............. .. .....+ ....
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~---~~~~~~------~~~~ 223 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT--NG---PPGLRN------PEKW 223 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--cC---CCCcCc------cccc
Confidence 111 1123333334568899999999999999999999975432222111111 11 111100 0111
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..++.+++.+|++.+|++|||+.|+++
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 224 SDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 367899999999999999999999975
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=278.02 Aligned_cols=249 Identities=14% Similarity=0.204 Sum_probs=179.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|... +++.||||.+...... .....+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 83 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE----GAPFTAIREASLLKDLKHANIVTLHDIIHTKK--TLTLVFE 83 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc----CCchhHHHHHHHHhhCCCcceeeEEEEEecCC--eEEEEEe
Confidence 378999999999999975 6889999988654311 11234678999999999999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++ ++|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 84 YLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred cCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 997 59999886443 3689999999999999999999998 999999999999999999999999999875431111
Q ss_pred c--------ccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCC--Ccccc------
Q 005734 547 V--------SDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPR--NFSCM------ 608 (680)
Q Consensus 547 ~--------~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~--~~~~~------ 608 (680)
. ....|+... ...++.++|||||||++|||++|+.||..... .+..+.+......+. .....
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 0 011233222 13457889999999999999999999965431 111111111111100 00000
Q ss_pred c--------CcccCCCCHH--HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 609 I--------DPSLKSFKQN--ELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 609 ~--------d~~l~~~~~~--~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. ...+...... ....+.+++.+|++.+|++||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 0000000000 1256789999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=274.84 Aligned_cols=250 Identities=15% Similarity=0.237 Sum_probs=184.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|++|+||+|+.. +++.|+||++...... .......+|+..+++++ |+||+++++++.+++ ..++||
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~ 77 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS----WEECMNLREVKSLRKLNEHPNIVKLKEVFREND--ELYFVF 77 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccc----hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC--cEEEEE
Confidence 478999999999999985 5788999987644321 12234557999999999 999999999998866 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+ +|+|.+++.......++|..++.++.+++.||.|||+. +++|+||||+||++++++.++|+|||+++......
T Consensus 78 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 78 EYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred ecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 999 88999999765556789999999999999999999998 99999999999999999999999999998765322
Q ss_pred Ccc-------cccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--------ccccc
Q 005734 546 KVS-------DDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------FSCMI 609 (680)
Q Consensus 546 ~~~-------~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 609 (680)
... ...|+.. .....+.++||||||++++||+||+.||......+........+..+.. ....+
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 111 1122221 1234578899999999999999999998654332222222221111100 00000
Q ss_pred Cccc--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSL--------KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l--------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+..+ ..........+.+++.+||+.+|++||+++|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000 0001112367899999999999999999999975
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-31 Score=269.44 Aligned_cols=242 Identities=15% Similarity=0.199 Sum_probs=183.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|.. .+|..+|+|.+...............|.+|++++++++|+||+++++++.+......++|+|
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE 86 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence 48999999999999997 46899999987543222222344568999999999999999999999987654335689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++....+++.+++.||.|||+. +++||||||+||+++.++.++|+|||+++.......
T Consensus 87 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 87 YMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred eCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 99999999998643 3588999999999999999999988 999999999999999999999999999976532100
Q ss_pred -----------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 -----------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 -----------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.....|+.......+.++|||||||+++||++|+.||.+.... +.+......+. .. .
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~--~~-------~ 229 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---AAIFKIATQPT--KP-------M 229 (264)
T ss_pred cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---HHHHHHHcCCC--CC-------C
Confidence 0011233333445678899999999999999999999754321 11222221111 01 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.....++.+++.+|++ +|..||+..+++.
T Consensus 230 ~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 230 LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 122233678999999999 5799999998764
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-32 Score=286.78 Aligned_cols=237 Identities=16% Similarity=0.235 Sum_probs=184.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
-++|+|.||+||.|+.. +...+|||-+..+..+. ..-...|+.+.++++|+|||+++|.|.+++ +.-|.||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~-----~QPLhEEIaLH~~LrHkNIVrYLGs~senG--f~kIFMEq 653 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSRE-----VQPLHEEIALHSTLRHKNIVRYLGSVSENG--FFKIFMEQ 653 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchh-----hccHHHHHHHHHHHhhHhHHHHhhccCCCC--eEEEEeec
Confidence 47999999999999965 45668998886655332 344778999999999999999999998887 67899999
Q ss_pred cCCCChhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEcccccccccCCC
Q 005734 468 APNGTVFEHLHIKEMDHL--DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l--~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~~~~ 544 (680)
+|||||.++|+.+-+ ++ ...+.-.+.+||.+||.|||.. .|||||||-+|||++ -.|.+||+|||-++.+..-
T Consensus 654 VPGGSLSsLLrskWG-PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi 729 (1226)
T KOG4279|consen 654 VPGGSLSSLLRSKWG-PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI 729 (1226)
T ss_pred CCCCcHHHHHHhccC-CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC
Confidence 999999999987654 34 5667777899999999999999 999999999999996 6789999999999887532
Q ss_pred CCcc--------cccccCC--CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 545 SKVS--------DDIENSV--LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 545 ~~~~--------~~~~~~~--~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
.... ...|+.. .+.-+...+|||||||++.||.||++||.+...... ...+...-. +. .
T Consensus 730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-AMFkVGmyK-------vH---P 798 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-AMFKVGMYK-------VH---P 798 (1226)
T ss_pred CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-hhhhhccee-------cC---C
Confidence 2222 1222221 234568889999999999999999999986542221 111111100 11 2
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+++..++...++++|..+||.+||+++++++
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 345667788999999999999999999999986
|
|
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=273.53 Aligned_cols=236 Identities=17% Similarity=0.294 Sum_probs=182.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC---CCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN---HKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|.. .+|..++||.+..... .....++.+|++++++++ |||++++++++.++. ..++
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~--~~~l 79 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP----DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP--RLWI 79 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCC----chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC--EEEE
Confidence 36899999999999997 5789999998865432 223456889999999996 999999999998776 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++++|.+++... .+++...+.++.+++.||+|||+. +|+||||+|+||++++++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 99999999999998542 689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 544 KSKVS--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 544 ~~~~~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
..... ...|+... ....+.++|||||||++|||++|+.||...... ...... .. . ..+.+.
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~---~~~~~~-~~-~-----~~~~~~ 223 (277)
T cd06917 154 NSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF---RAMMLI-PK-S-----KPPRLE 223 (277)
T ss_pred CccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh---hhhhcc-cc-C-----CCCCCC
Confidence 32111 11233222 223578899999999999999999999754322 111111 11 0 011111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. .....++.+++.+||+.+|++||++.|++.
T Consensus 224 ~--~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 224 D--NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred c--ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0 113467889999999999999999999986
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=278.17 Aligned_cols=253 Identities=14% Similarity=0.152 Sum_probs=180.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCC---CceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEP---FNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~---~~~~ 462 (680)
.+.||+|+||.||+|... +|+.||||+....... ......+.+|++++++++ |+||+++++++...+. ...+
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE---EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccc---cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 378999999999999975 6899999987654311 122356888999999995 6999999999876541 1268
Q ss_pred EEEEecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcccccc
Q 005734 463 MVFEYAPNGTVFEHLHIKE---MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFT 538 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~---~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla 538 (680)
+||||+++ +|.+++.... ...+++.....++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccc
Confidence 99999975 8988886432 34689999999999999999999998 9999999999999998 899999999998
Q ss_pred cccCCCCC---cc-----cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccc
Q 005734 539 TIALPKSK---VS-----DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSC 607 (680)
Q Consensus 539 ~~~~~~~~---~~-----~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 607 (680)
+....... .. ...|+... ...++.++||||||+++|||+||+.||....+......+......+.. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (295)
T cd07837 159 RAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPG 238 (295)
T ss_pred eecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 76532111 00 11223221 234578899999999999999999999764332221111111111100 000
Q ss_pred cc-------Ccc-----cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MI-------DPS-----LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~-------d~~-----l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.. .+. +.........++.+++.+|++.+|++||++.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 239 VSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 000 00011123467889999999999999999999975
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=275.17 Aligned_cols=252 Identities=18% Similarity=0.257 Sum_probs=185.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||.|++|.||+|+.. +|+.+|||++...... ......+.+|++++++++|+|++++++++........++|+|
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEK---EGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEeccccc---ccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 367999999999999976 5889999998765311 233457889999999999999999999998772126899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++ +|.+++.... ..+++..++.++.++++||+|||+. +++|+||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9974 8988886442 4789999999999999999999998 999999999999999999999999999987653321
Q ss_pred --cc-------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--CcccccC----
Q 005734 547 --VS-------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFSCMID---- 610 (680)
Q Consensus 547 --~~-------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d---- 610 (680)
.. ...|+... ....++++||||||+++|||+||+.||...........+......+. ......+
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF 235 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhh
Confidence 00 11123221 12457889999999999999999999976543332232222221110 0000000
Q ss_pred ----c------ccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 ----P------SLKS-FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ----~------~l~~-~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+ .+.+ ....+..++.+++.+|++.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0 0000 00112567899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=268.07 Aligned_cols=240 Identities=14% Similarity=0.162 Sum_probs=176.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHH-HcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL-SRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
..||+|++|.||+|... +|+.||||.+...... .......+..|..++ ...+|+|++++++++..++ ..++|+|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e 77 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI--AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD--YLYLVME 77 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh--HHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC--eEEEEEe
Confidence 36899999999999874 6889999987543211 122233455555544 4458999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 78 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 152 (260)
T cd05611 78 YLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK 152 (260)
T ss_pred ccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecccccc
Confidence 99999999999643 3688999999999999999999998 999999999999999999999999999876542211
Q ss_pred c----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 547 V----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 547 ~----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
. ....|+.......+.++||||||+++|||+||+.||........ ............ +. .......
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~----~~---~~~~~~~ 222 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV---FDNILSRRINWP----EE---VKEFCSP 222 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHHhcccCCC----Cc---ccccCCH
Confidence 1 11223333334468899999999999999999999975442222 221111110000 00 1112346
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHH
Q 005734 623 AICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
++.+++.+||+.+|++||++.++.+
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHH
Confidence 7899999999999999998765544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=266.27 Aligned_cols=240 Identities=17% Similarity=0.246 Sum_probs=188.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|.||+|... ++..|++|+....... ......+.+|++++++++|+||+++++++........++|+||
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 82 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS---EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY 82 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccc---hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEe
Confidence 78999999999999986 7889999988655422 3446789999999999999999999999987721267999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++++|.+++.... .++|..+..++.++++||+|||+. +++|+||+|+||+++.++.++|+|||.+........
T Consensus 83 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 83 VSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999996543 799999999999999999999997 999999999999999999999999999887764321
Q ss_pred ----ccc-----ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 547 ----VSD-----DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 547 ----~~~-----~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ..|+.......+.++||||||++++||++|+.||.... +........... ... ...+
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~-~~~--------~~~~ 226 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG--NPMAALYKIGSS-GEP--------PEIP 226 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chHHHHHhcccc-CCC--------cCCC
Confidence 111 11333333446788999999999999999999997643 111111111110 111 1122
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
......+.+++.+|++.+|++||++.++++
T Consensus 227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 223478999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-31 Score=275.92 Aligned_cols=250 Identities=16% Similarity=0.201 Sum_probs=178.5
Q ss_pred ccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 390 IIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
.+|.|+++.||+++. +|+.||||++..... .....+.+.+|++++++++|+||+++++++.+.+ ..+++|||++
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~--~~~~~~e~~~ 82 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSC---SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS--ELYVVSPLMA 82 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEecccc---chhHHHHHHHHHHHHHhcCCcchhhhhheeecCC--eEEEEEeccC
Confidence 334445555555555 689999999875421 1334567999999999999999999999998877 6799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc--
Q 005734 470 NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV-- 547 (680)
Q Consensus 470 ~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~-- 547 (680)
+|+|.+++.......+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||.+.........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99999999765555789999999999999999999998 9999999999999999999999999988765422110
Q ss_pred --------c-----cccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HHHHHHHHhcC----C-----
Q 005734 548 --------S-----DDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKELS-IEKWAADYLNE----P----- 602 (680)
Q Consensus 548 --------~-----~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~~~~~~~~~~----~----- 602 (680)
. ...|+.... ..+++++|||||||++|||++|+.||....... ..+........ .
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 0 011222111 235788999999999999999999997543211 11111100000 0
Q ss_pred -CCccc----ccCcccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 -RNFSC----MIDPSLK-----SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 -~~~~~----~~d~~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..... ..++... ........++.+++.+||..+|++|||++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00000 0001000 0112234578899999999999999999999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-31 Score=274.40 Aligned_cols=248 Identities=15% Similarity=0.168 Sum_probs=177.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|.. .+|..+++|++...... .....+.+|++++++++|+||+++.+++..++ ..++|+||
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--~~~lv~e~ 84 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEE----GVPFTAIREASLLKGLKHANIVLLHDIIHTKE--TLTFVFEY 84 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC----CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC--eEEEEEec
Confidence 7899999999999986 46889999998654321 12335678999999999999999999998776 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+. ++|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+||+++.++++||+|||+++........
T Consensus 85 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 159 (291)
T cd07870 85 MH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT 159 (291)
T ss_pred cc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC
Confidence 95 68877775332 4578889999999999999999998 9999999999999999999999999998764321111
Q ss_pred c--------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccc-cHHHHHHHHhcCCC------------Cc
Q 005734 548 S--------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKEL-SIEKWAADYLNEPR------------NF 605 (680)
Q Consensus 548 ~--------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~-~~~~~~~~~~~~~~------------~~ 605 (680)
. ...|+.... ...+.++|||||||++|||+||+.||....+. .....+......+. ..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK 239 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccccc
Confidence 0 111232221 23567899999999999999999999754321 11111111111000 00
Q ss_pred ccccC----cccCCCC--HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 606 SCMID----PSLKSFK--QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 606 ~~~~d----~~l~~~~--~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..... +.+.... ......+.+++.+|++.||++|||++|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred chhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000 0000000 011357789999999999999999999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=274.07 Aligned_cols=250 Identities=14% Similarity=0.211 Sum_probs=182.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||.|++|.||+|+.. +|..||||++...... .....+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 78 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE----GTPSTAIREISLMKELKHENIVRLHDVIHTEN--KLMLVFE 78 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccc----cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC--cEEEEEe
Confidence 378999999999999985 6889999988754321 12345778999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|+++ +|.+++.... ...+++..+.+++.|++.||+|||+. +++||||||+||++++++.++++|||+++......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9984 8988886433 34689999999999999999999988 99999999999999999999999999997653221
Q ss_pred Cc--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccc-----cc
Q 005734 546 KV--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSC-----MI 609 (680)
Q Consensus 546 ~~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~ 609 (680)
.. ....|+.... ..++.++|||||||++|||+||+.||.+....+....+......+.. ... ..
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 10 0111222211 24577899999999999999999999754432222222111111100 000 00
Q ss_pred CcccC--------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLK--------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~--------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..... .........+.+++.+|++.+|.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 011123457889999999999999999999975
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=281.74 Aligned_cols=261 Identities=12% Similarity=0.185 Sum_probs=186.7
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|+. .+|+.||||++...... ......+.+|++++++++|+||+++++++..... .+.++
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 97 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS---EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYL 97 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc---ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEE
Confidence 8999999999999996 47899999988643211 1223568899999999999999999999875431 14589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+.. +|.++.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+|++|||+++....
T Consensus 98 v~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~ 169 (342)
T cd07879 98 VMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHADA 169 (342)
T ss_pred Eeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence 9999964 7776652 3589999999999999999999998 999999999999999999999999999886543
Q ss_pred CCCcc-----cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C------------
Q 005734 544 KSKVS-----DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N------------ 604 (680)
Q Consensus 544 ~~~~~-----~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~------------ 604 (680)
..... ...|+.... ..++.++|||||||++|||++|+.||...........+......+. .
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (342)
T cd07879 170 EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKS 249 (342)
T ss_pred CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHH
Confidence 22111 112333222 3467889999999999999999999976432222111111111000 0
Q ss_pred ----cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhccCCCCC
Q 005734 605 ----FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVINISPEQA 660 (680)
Q Consensus 605 ----~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~~~~~~~ 660 (680)
........+..........+.+++.+|++.||++||++++++.. ++...+..+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~~ 311 (342)
T cd07879 250 YIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEETE 311 (342)
T ss_pred HHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccCC
Confidence 00000000000001123568899999999999999999999965 888877665554
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-31 Score=274.84 Aligned_cols=249 Identities=15% Similarity=0.156 Sum_probs=180.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|+.. +|+.||+|.+...... ....+.+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 81 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED---EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--RLYLVFE 81 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc---ccchHHHHHHHHHHHhccCCCEeeEEEEEecCC--eEEEEEe
Confidence 378999999999999975 7889999987543211 123456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla~~~~~~~ 545 (680)
|++ ++|.+++.......+++.....++.+++.||+|||+. +++||||||+||+++. ++.+||+|||+++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 5888888654444568888899999999999999998 9999999999999985 5678999999997653221
Q ss_pred Cc--------ccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccccc-------
Q 005734 546 KV--------SDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI------- 609 (680)
Q Consensus 546 ~~--------~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 609 (680)
.. ....|+... ...++.++|||||||++|||+||+.||......+....+......+ .....
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 235 (294)
T PLN00009 158 RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTP--NEETWPGVTSLP 235 (294)
T ss_pred cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC--Chhhccccccch
Confidence 10 011133221 2346788999999999999999999997543222211111111111 00000
Q ss_pred ----------CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 ----------DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 ----------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.............++.+++.+|++.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000011122356889999999999999999999986
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=276.75 Aligned_cols=250 Identities=14% Similarity=0.168 Sum_probs=180.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|+.. +|..+|+|++...... ......+.+|++++++++|+||+++++++.+.. ..++|+|
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~---~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 79 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLYDVLHSDK--KLTLVFE 79 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeeccccc---ccCccchhHHHHHHHhcCCCCeeeHHHHhccCC--ceEEEEe
Confidence 368999999999999974 7899999988654321 123356788999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++ ++|.+++... ...+++.....++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 80 YCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred cCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 996 5888887543 24689999999999999999999998 999999999999999999999999999986542211
Q ss_pred c--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCC-----cccccC-
Q 005734 547 V--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRN-----FSCMID- 610 (680)
Q Consensus 547 ~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~d- 610 (680)
. ....|+.... ..++.++|||||||++|||+||+.|+....+ ....+.+.+....+.. .....+
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 1 0112332222 2357889999999999999999998643221 1111222111111000 000000
Q ss_pred cccC---------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 PSLK---------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ~~l~---------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.... ........++.+++.+|++.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 011123467889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=267.63 Aligned_cols=238 Identities=13% Similarity=0.113 Sum_probs=174.9
Q ss_pred ccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHH---HHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 390 IIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQV---DTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~---~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+||+|+||.||++.. .+|+.||+|.+..+..... .....+..|. +.++...||||+++.+++.+.+ ..++|+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~ 76 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK--QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFIL 76 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccc--hhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--EEEEEE
Confidence 489999999999986 4688999998865432211 1122233443 3445567999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..++|..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 77 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~ 151 (278)
T cd05606 77 DLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 151 (278)
T ss_pred ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC
Confidence 999999999988533 4699999999999999999999998 89999999999999999999999999987553221
Q ss_pred Cc------ccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 KV------SDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ~~------~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ....|+... ...++.++|||||||+++||++|+.||.................. ++.+ +.
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~---~~ 220 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--------AVEL---PD 220 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc--------CCCC---CC
Confidence 11 111233322 224678899999999999999999999764322222211111111 0111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
....++.+++.+|+..+|++|| ++.++++
T Consensus 221 ~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 221 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1236789999999999999999 8989875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=274.77 Aligned_cols=235 Identities=19% Similarity=0.249 Sum_probs=181.3
Q ss_pred hhhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 384 CEDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 384 ~~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
.++|. ..||+|+||.||.++- .+|..+|+|++++... ..+.+.+-.+.|-.+|...++++||+|+-.+++.+ +
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M--~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~--~ 215 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEM--LKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE--Y 215 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHH--HhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC--e
Confidence 34565 8999999999999986 4799999999975432 23456677889999999999999999999999888 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.||||||+|||++..+|-.. ..|+......++.++.-|+.-+|.. ++|||||||+|+|||..|++|++||||++.
T Consensus 216 LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred eEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccch
Confidence 89999999999999999543 4688888888889999999999999 999999999999999999999999999965
Q ss_pred cCCCCC----------------------c-----c-----------------------cccccCCCC-----CCCCCCCC
Q 005734 541 ALPKSK----------------------V-----S-----------------------DDIENSVLP-----PLADPETN 565 (680)
Q Consensus 541 ~~~~~~----------------------~-----~-----------------------~~~~~~~~~-----~~~s~~sD 565 (680)
+..... . . ...|.|.+| ..++..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 431000 0 0 000222222 23567799
Q ss_pred eeehhHHHHHHHhCCCCCCccccccHHHHHHHH---hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 005734 566 IYSFGILMLEIISGKLPYCEEKELSIEKWAADY---LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT 641 (680)
Q Consensus 566 VySfGvvllElltG~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt 641 (680)
.||+|||+|||+.|.+||..+.+......+... +.-+.. .....+..+||.+|+. ||++|.-
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-------------~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-------------VDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-------------CcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999999876654433222221 111111 1122688999999999 9999986
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-31 Score=279.19 Aligned_cols=260 Identities=12% Similarity=0.187 Sum_probs=187.5
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lV 464 (680)
..||+|+||+||+++. .+|..||||.+...... ......+.+|+.++++++|+||+++++++..... ...++|
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv 87 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN---RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIV 87 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccc---cchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEE
Confidence 7899999999999986 47899999987643211 2234467789999999999999999998865421 146999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||+. ++|.+++... ..+++.....++.+++.||.|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 88 YELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 99995 7899888543 4689999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCcc--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--Cccccc----
Q 005734 545 SKVS--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFSCMI---- 609 (680)
Q Consensus 545 ~~~~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~---- 609 (680)
.... ...|+... ....+.++|||||||+++||++|+.||.+................+. ....+.
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 1110 11123222 13467899999999999999999999975432222222222111100 000000
Q ss_pred -----------CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhccCC
Q 005734 610 -----------DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVINISP 657 (680)
Q Consensus 610 -----------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~~~~ 657 (680)
++...........++.+++.+|++.+|++|||++++++. ++.+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~ 302 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSD 302 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCccc
Confidence 010111112334678999999999999999999999987 776654443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=271.58 Aligned_cols=249 Identities=14% Similarity=0.200 Sum_probs=186.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|.||++... +|..+++|.+...... ......+.+|++++++++|+||+++++++..+. ..++|+||
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e~ 79 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES---EGIPKTALREIKLLKELNHPNIIKLLDVFRHKG--DLYLVFEF 79 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEecccccc---chhHHHHHHHHHHHHHhcCCCcchHHHhhccCC--CEEEEEec
Confidence 67999999999999975 7888999987654322 133567889999999999999999999998876 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++ +|.+++.... ..+++..+..++.+++.||+|||+. +|+|+||||+||++++++.+||+|||.+........
T Consensus 80 ~~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 80 MDT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred cCC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence 975 8988886543 4789999999999999999999998 999999999999999999999999999877654321
Q ss_pred cc-------cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--Cccccc-------
Q 005734 547 VS-------DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFSCMI------- 609 (680)
Q Consensus 547 ~~-------~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~------- 609 (680)
.. ...|+..... ..+.++||||||++++||+||+.||......+....+...+..+. ......
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 00 1123322222 568889999999999999999999976543332222222221110 000000
Q ss_pred -------CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 -------DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 -------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+........+...++.+++.+||+.+|.+||++++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00001112234578999999999999999999999985
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=271.43 Aligned_cols=239 Identities=18% Similarity=0.240 Sum_probs=182.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|..|++|++....... ......+.+|++++++++|+|++++++++.+.. ..++||||
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 102 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT--NEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH--TAWLVMEY 102 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCc--hHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEEec
Confidence 67999999999999974 68899999886543221 233457889999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+. |++.+++... ...++|.++..++.+++.||+|||+. +++||||||+||++++++.+||+|||++.........
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~ 177 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSF 177 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCc
Confidence 95 6888887543 34689999999999999999999998 9999999999999999999999999998754322211
Q ss_pred c----cccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 548 S----DDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 548 ~----~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
. ...|+.. ....++.++|||||||++|||++|+.||............ .... ...... ...
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~~--~~~~~~-------~~~ 245 (313)
T cd06633 178 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQND--SPTLQS-------NEW 245 (313)
T ss_pred cccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---HhcC--CCCCCc-------ccc
Confidence 1 1123332 1245678899999999999999999998764432222221 1110 010111 112
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+.+++.+|++.+|++||++.+++..
T Consensus 246 ~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 246 TDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2468899999999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-31 Score=266.47 Aligned_cols=239 Identities=15% Similarity=0.206 Sum_probs=187.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+++.. ++..+++|.+...... .....++.+|++++++++|+||+++++++.+.. ..++|+|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 79 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS---QKEREDAVNEIRILASVNHPNIISYKEAFLDGN--KLCIVME 79 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc---HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC--EEEEEeh
Confidence 478999999999999864 7889999988643321 234567889999999999999999999988776 7899999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|+++++|.+++... ....+++..+..++.++++||+|||+. +++||||||+||++++++.+|++|||+++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 99999999998652 235689999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCcc------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 545 SKVS------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 545 ~~~~------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.... ...|+......++.++||||||++++||++|+.||...........+ ... .. ...+.
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~~--~~--------~~~~~ 223 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKV---QRG--KY--------PPIPP 223 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hcC--CC--------CCCch
Confidence 1111 11233333445678899999999999999999999764422222211 111 11 11122
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+|++.+|++||++.++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 34467999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-31 Score=274.91 Aligned_cols=253 Identities=16% Similarity=0.189 Sum_probs=184.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|+.||+|++....... .....+.+|++++++++|+||+++++++.+......++|||
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD---GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVME 88 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC---CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEe
Confidence 378999999999999974 68999999887543221 12234678999999999999999999987654325799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+. ++|.+++.... ..+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 89 ~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 163 (309)
T cd07845 89 YCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK 163 (309)
T ss_pred cCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCCccC
Confidence 996 58888886432 5689999999999999999999998 999999999999999999999999999987653211
Q ss_pred c-c-------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC-cc----------
Q 005734 547 V-S-------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN-FS---------- 606 (680)
Q Consensus 547 ~-~-------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~---------- 606 (680)
. . ...|+... ...++.++||||+||++|||++|+.||....+......+......+.. ..
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
T cd07845 164 PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVG 243 (309)
T ss_pred CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccc
Confidence 1 0 11223222 134578899999999999999999999765444333333332221100 00
Q ss_pred cc-cCc-ccCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 607 CM-IDP-SLKSF---KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 607 ~~-~d~-~l~~~---~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.. ... ..... ......++.+++.+|++.||++|||++|++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 244 KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 000 00000 01124567899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=264.36 Aligned_cols=238 Identities=15% Similarity=0.263 Sum_probs=188.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||.|++|.||++... ++..+++|++...... .....++.+|++++++++|+|++++.+.+.... ..++|+||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~--~~~lv~e~ 80 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS---EKEREDALNEVKILKKLNHPNIIKYYESFEEKG--KLCIVMEY 80 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC---hHHHHHHHHHHHHHHhcCCCChhheEEEEecCC--EEEEEEEe
Confidence 68999999999999975 6889999988654321 344567889999999999999999999998776 67999999
Q ss_pred cCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
+++++|.+++.... ...+++..+.+++.+++.||+|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997543 46799999999999999999999998 99999999999999999999999999988765432
Q ss_pred Ccc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...|+.......+.++||||+|++++||++|+.||..... .+......... .. ..+
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~--~~--------~~~ 224 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL---LELALKILKGQ--YP--------PIP 224 (258)
T ss_pred ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH---HHHHHHHhcCC--CC--------CCC
Confidence 111 1123333344567889999999999999999999975432 22222222211 11 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+++.+||..+|++||++.++++
T Consensus 225 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 225 SQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 123367889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=269.56 Aligned_cols=245 Identities=14% Similarity=0.177 Sum_probs=183.1
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|++|.||+++. .++..+|||++..... .........+..|++++.++ +|+||+++.+.+..+. ..+
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~--~~~ 81 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI-VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT--KLH 81 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH-HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC--EEE
Confidence 47899999999999985 3678899998864321 11123345788999999999 5999999999888776 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... ..+++.....++.|+++||+|||+. +++||||||+||+++.++.++|+|||+++...
T Consensus 82 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 82 LILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 999999999999998643 3689999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCCcc---------cccccCCCCC--CCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKVS---------DDIENSVLPP--LADPETNIYSFGILMLEIISGKLPYCEEKELS-IEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~~---------~~~~~~~~~~--~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d 610 (680)
...... ...|+..... ..+.++||||||++++||+||+.||....... ..+...........
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 230 (288)
T cd05583 157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP------ 230 (288)
T ss_pred cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCC------
Confidence 321110 1112222222 25778999999999999999999986432221 22222222222111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.+......+.+++.+||+.+|++|||++++.+.|+.
T Consensus 231 -----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 231 -----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 111122567899999999999999999988776653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=271.70 Aligned_cols=245 Identities=17% Similarity=0.217 Sum_probs=184.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+|+.. ++..+++|.+...... .....+++.+|++++++++|+|++++.+++.... ..++|+|
T Consensus 20 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 95 (308)
T cd06634 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVME 95 (308)
T ss_pred HHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--eeEEEEE
Confidence 368999999999999974 6788999987643211 1233456889999999999999999999998876 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+. |++.+++.... ..+++.++..++.+++.||.|||+. +++||||||+||++++++.++|+|||++........
T Consensus 96 ~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (308)
T cd06634 96 YCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX 170 (308)
T ss_pred ccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCccc
Confidence 996 68888775333 4589999999999999999999998 999999999999999999999999999887653322
Q ss_pred cc----cccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 547 VS----DDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 547 ~~----~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.. ...|+.. .....+.++|||||||++|||+||+.||......... ...... . . +.. ....
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~-~-~-----~~~--~~~~ 238 (308)
T cd06634 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL---YHIAQN-E-S-----PAL--QSGH 238 (308)
T ss_pred ccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH---HHHhhc-C-C-----CCc--Cccc
Confidence 11 1123321 1234678999999999999999999998654322111 111111 0 0 000 0112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
....+.+++.+||+.+|++||++.+++.......
T Consensus 239 ~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred ccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 3357889999999999999999999997654443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=254.62 Aligned_cols=243 Identities=20% Similarity=0.347 Sum_probs=189.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhh---HHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDW---LKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 463 (680)
+++|+|..++|-++..+ +|...|||++........ ..+..++-.+|+.+|+++ .||+|+.+..++..+. ..++
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s--F~Fl 100 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA--FVFL 100 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc--hhhh
Confidence 78999999999998874 788899998876543221 234456678899999999 5999999999999877 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+|.|+.|.|+++|... -.++...-.+|+.++..|+.|||.. .||||||||+|||+|++.++||+|||+++.+.+
T Consensus 101 VFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 101 VFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred hhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeeccCC
Confidence 99999999999999654 3688999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCcc--cccccCCCC-----------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 544 KSKVS--DDIENSVLP-----------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 544 ~~~~~--~~~~~~~~~-----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ...|+|.+| .-++.+.|+|+.||+||.|+.|..||......-. ++........+ -.
T Consensus 176 GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlM---LR~ImeGkyqF---~s 249 (411)
T KOG0599|consen 176 GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLM---LRMIMEGKYQF---RS 249 (411)
T ss_pred chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHH---HHHHHhccccc---CC
Confidence 43322 122333332 3467889999999999999999999975332111 12222211111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
|. ..+....+.+|+.+|++.||.+|.|++|++..
T Consensus 250 pe----Wadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 250 PE----WADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred cc----hhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 22 23345678999999999999999999999865
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=278.39 Aligned_cols=252 Identities=13% Similarity=0.159 Sum_probs=184.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHH---------HHHHHHHHHHHHHHcCCCCcccceeeEEecCC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLK---------SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~---------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 457 (680)
.+.||.|+||.||+|... +++.||||++.......... .....+.+|++++++++|+||+++++++...+
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 468999999999999964 78999999886543211000 01225789999999999999999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGl 537 (680)
..++||||++ |+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+||+++.++.++++|||+
T Consensus 94 --~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 94 --FINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred --cEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccc
Confidence 6799999996 6999998543 3589999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCCCC--------------c--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHH
Q 005734 538 TTIALPKSK--------------V--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKW 594 (680)
Q Consensus 538 a~~~~~~~~--------------~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~ 594 (680)
++....... . ....|+.... ...+.++||||||+++|||+||+.||....+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 245 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGR 245 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 976541100 0 0011222211 2357789999999999999999999976554443333
Q ss_pred HHHHhcCCCCc--ccc------------cCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 595 AADYLNEPRNF--SCM------------IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 595 ~~~~~~~~~~~--~~~------------~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+......+... ... ..+...........++.+++.+|++.+|++||+++|++.
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 246 IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 33332221110 000 000000111122467889999999999999999999986
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=277.11 Aligned_cols=249 Identities=14% Similarity=0.219 Sum_probs=181.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|... +|+.||||++...... ......+.+|++++++++|+||+++++++..... ...++
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 98 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN---VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYL 98 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccC---hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEE
Confidence 78999999999999964 7899999987543211 2234567789999999999999999999864431 14689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+. ++|.+.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 v~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 99 VMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred EEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 999995 588888753 288999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC--------------
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-------------- 602 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-------------- 602 (680)
..... ...|+......++.++|||||||+++||++|+.||...+.......+...+..+
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (353)
T cd07850 171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN 250 (353)
T ss_pred CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence 22111 112333334457889999999999999999999997543221111111111100
Q ss_pred ----------CCcccccCcccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 ----------RNFSCMIDPSLK-----SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 ----------~~~~~~~d~~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+......... ........++.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000011110000 0011335678899999999999999999999865
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=268.98 Aligned_cols=242 Identities=18% Similarity=0.273 Sum_probs=178.8
Q ss_pred hccccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.+.||+|++|.||+|+..+ ++.||||.+..... .....++..|++++.+.+ |+||++++++|.++. ..++|
T Consensus 19 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~v 92 (296)
T cd06618 19 NLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN----KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS--DVFIC 92 (296)
T ss_pred eeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC----hHHHHHHHHHHHHHHhccCCCchHhhheeeecCC--eEEEE
Confidence 34899999999999999864 89999999864432 123455677888777775 999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||++ +++.+++.... ..+++..+.+++.++++||+|||+.. +|+||||||+||++++++.+||+|||++......
T Consensus 93 ~e~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 93 MELMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eeccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 99985 47777764322 37899999999999999999999732 8999999999999999999999999998765422
Q ss_pred CCcc-------cccccCCCC----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 545 SKVS-------DDIENSVLP----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
.... ...|+.... ...+.++||||||+++|||++|+.||..... ..+........... .+
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~-------~~ 239 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT--EFEVLTKILQEEPP-------SL 239 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh--HHHHHHHHhcCCCC-------CC
Confidence 1111 112333222 2357789999999999999999999964321 11222222222110 00
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. .......++.+++.+||+.+|++||+++++++.
T Consensus 240 ~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 240 P-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred C-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 001123678999999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=278.81 Aligned_cols=256 Identities=16% Similarity=0.250 Sum_probs=184.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lV 464 (680)
+.||+|++|.||+|+. .+|+.||||++..... ......+.+|++++++++|+||+++++++..... ...++|
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 86 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH----QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIV 86 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEeccccc----chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEE
Confidence 8999999999999986 4789999998853221 2234568889999999999999999998765431 146899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||++ ++|.+.+.. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 87 QELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred ehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 99996 488887753 3689999999999999999999998 9999999999999999999999999998775422
Q ss_pred CCcc-----------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--CcccccC
Q 005734 545 SKVS-----------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFSCMID 610 (680)
Q Consensus 545 ~~~~-----------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d 610 (680)
.... ...|+... ...++.++|||||||+++||+||+.||.+.............+..+. ....+.+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 1111 11122211 23457789999999999999999999975432222222222222110 0000000
Q ss_pred ccc----------CC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhcc
Q 005734 611 PSL----------KS-----FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVINI 655 (680)
Q Consensus 611 ~~l----------~~-----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~~ 655 (680)
... .. .......++.+++.+||+.+|++|||+.|+++. ++.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 000 00 001123578899999999999999999999987 6655443
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-31 Score=278.55 Aligned_cols=251 Identities=12% Similarity=0.168 Sum_probs=182.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC--CCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE--PFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lV~ 465 (680)
+.||+|++|.||+|+.. +|..||+|++...... ......+.+|+.++++++|+||+++++++.... ....++|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 87 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV---PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVM 87 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEecccccc---ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEE
Confidence 78999999999999964 6899999988654321 123456778999999999999999999876432 12579999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+. |+|.+++... ..+++....+++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 88 e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 88 DLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred ehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 9995 6999998643 3589999999999999999999998 99999999999999999999999999997654221
Q ss_pred Ccc------------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C-------
Q 005734 546 KVS------------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N------- 604 (680)
Q Consensus 546 ~~~------------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~------- 604 (680)
... ...|+.... ..++.++|||||||++|||++|+.||...........+......+. .
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 110 111222111 2467889999999999999999999976543222222222111100 0
Q ss_pred --ccccc---C----cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 --FSCMI---D----PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 --~~~~~---d----~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..... . ..+.........++.+++.+|++.+|++||++++++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000 0 00000112234689999999999999999999998874
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=269.94 Aligned_cols=249 Identities=16% Similarity=0.229 Sum_probs=185.6
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|++|.||+|+.. +++.+++|+....... ....+.+..|++++++++|+|++++++++.+.+ ..++|+||
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--~~~~v~e~ 79 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE---EGIPSTALREISLLKELKHPNIVKLLDVIHTER--KLYLVFEY 79 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEecccccc---ccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC--ceEEEecC
Confidence 67999999999999985 5899999988765311 223456788999999999999999999998876 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
++ ++|.+++.... ..+++..+.+++.++++||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 154 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT 154 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence 97 59999997543 4689999999999999999999998 9999999999999999999999999998776432211
Q ss_pred -c-------cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--c---ccc--cCc
Q 005734 548 -S-------DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--F---SCM--IDP 611 (680)
Q Consensus 548 -~-------~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~---~~~--~d~ 611 (680)
. ...|+..... ..+.++|||||||+++|+++|+.||...........+......+.. . ... .+.
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 0 1123322222 6688899999999999999999999765433332222222211100 0 000 010
Q ss_pred ccCC--------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 612 SLKS--------FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 612 ~l~~--------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.... ........+.+++.+|++.+|++||++++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 1100 00112467899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-30 Score=266.95 Aligned_cols=240 Identities=15% Similarity=0.177 Sum_probs=178.9
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||++.. .+|..||+|++...... ......+.+.+|++++.++ +|+||+++++++..+. ..+
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~--~~~ 81 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIV-QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT--KLH 81 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhh-hcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC--eEE
Confidence 37899999999999986 47899999988643211 1122345688999999999 5999999999988776 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+|+||+++|+|.+++... ..+++.....++.++++||+|||+. +++||||||+||++++++.+||+|||+++...
T Consensus 82 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 82 LILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 999999999999998643 3688999999999999999999998 99999999999999999999999999987754
Q ss_pred CCCCcc---------cccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKVS---------DDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~~---------~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 610 (680)
...... ...|+.... ...+.++||||||+++|||+||+.||..... ....+............
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 231 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----- 231 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC-----
Confidence 321110 111222221 2346789999999999999999999964322 22233333222221111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRP-----TMNDII 646 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~ 646 (680)
+......+.+++.+|++.+|++|| +.++++
T Consensus 232 ------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~ 266 (290)
T cd05613 232 ------PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK 266 (290)
T ss_pred ------CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence 112235788999999999999998 455554
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-31 Score=267.48 Aligned_cols=241 Identities=13% Similarity=0.197 Sum_probs=180.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. .+..+++|+++.............++..|++++++++||||+++++++.+.. ..++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 82 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD--AFCIITE 82 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC--ceEEEEE
Confidence 478999999999999874 3444566655432222222233456778999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|+++++|.+++.. .....+++..++.++.+++.||+|||+. +++|+||||+||++++ +.+||+|||+++.....
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 83 YCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred eCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 9999999998864 2345799999999999999999999998 9999999999999986 45999999998776432
Q ss_pred CCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.... ...|+.......+.++||||||+++|||++|..||.... ..+......... ....
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~ 225 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN---FLSVVLRIVEGP----------TPSL 225 (260)
T ss_pred cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHcCC----------CCCC
Confidence 2111 112333333445778999999999999999999996432 222222222211 0111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.....++.+++.+||..+|++||++.|+++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 2334468899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=275.01 Aligned_cols=253 Identities=13% Similarity=0.220 Sum_probs=179.3
Q ss_pred ccccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
...||+|++|.||+|+.. ++..||+|.+...... .......+.+|++++.+++||||+++++++.+.+....++|
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 82 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ--YTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLL 82 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc--ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEE
Confidence 468999999999999974 4789999998753211 01223467889999999999999999999998733378999
Q ss_pred EEecCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----CCCeEEccccc
Q 005734 465 FEYAPNGTVFEHLHIK---EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD----DYAAKVAEICF 537 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~---~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~----~~~~ki~DFGl 537 (680)
|||+++ +|.+++... ....++......|+.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 83 FDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999975 777766422 223688999999999999999999998 8999999999999999 89999999999
Q ss_pred ccccCCCCCcc-----------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc----------HHHHH
Q 005734 538 TTIALPKSKVS-----------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELS----------IEKWA 595 (680)
Q Consensus 538 a~~~~~~~~~~-----------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~----------~~~~~ 595 (680)
++......... ...|+.... ..++.++|||||||+++||+||+.||....... +...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 98764321100 111222211 245788999999999999999999997443211 11111
Q ss_pred HHHhcCCC-----------CcccccCc-ccCCCC-----------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 596 ADYLNEPR-----------NFSCMIDP-SLKSFK-----------QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 596 ~~~~~~~~-----------~~~~~~d~-~l~~~~-----------~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. .+..+. ......+. ...... .....++.+++.+|++.+|++|||+.|+++
T Consensus 239 ~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 239 E-VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred H-HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1 111000 00000000 000000 022356889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=271.63 Aligned_cols=252 Identities=14% Similarity=0.159 Sum_probs=179.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC------Cc
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP------FN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~ 460 (680)
...||+|+||.||+|+.. +++.||||.+...... ......+.+|++++++++||||++++++|..... ..
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 93 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGS 93 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc---CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCce
Confidence 378999999999999975 6899999988654321 1123356789999999999999999999876431 13
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++||||+. ++|.+.+... ...+++.+..+++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 94 ~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 94 FYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred EEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 589999996 5888887543 24689999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcc------------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--Cc
Q 005734 541 ALPKSKVS------------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NF 605 (680)
Q Consensus 541 ~~~~~~~~------------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~ 605 (680)
........ ...|+.... ...++++||||||++++||+||+.||...........+........ ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (310)
T cd07865 169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVW 248 (310)
T ss_pred ccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 64321110 112232211 1257789999999999999999999976543333333333221100 00
Q ss_pred ccc-----cCc-ccCCC----------CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 606 SCM-----IDP-SLKSF----------KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 606 ~~~-----~d~-~l~~~----------~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
... .+. ..... .......+.+++.+|+..+|++|||++++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 249 PGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 000 000 00000 0001245679999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-30 Score=259.27 Aligned_cols=237 Identities=19% Similarity=0.307 Sum_probs=185.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|++|.||+++.. ++..+++|........ ......+.+|++++.+++|+|++++++++.+.+ ..++|+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~~~v~e 79 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK---EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD--SLYIILE 79 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC---HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC--EEEEEEe
Confidence 478999999999999875 6788999988765422 234567999999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 99999999998644 4789999999999999999999998 999999999999999999999999999987653322
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+.......+.++||||+|++++||++|+.|+......... ....... .. ..+.
T Consensus 155 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~--~~--------~~~~ 221 (254)
T cd06627 155 DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL---FRIVQDD--HP--------PLPE 221 (254)
T ss_pred cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH---HHHhccC--CC--------CCCC
Confidence 10 11233322334678899999999999999999998754321111 1111110 00 0111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+|+..+|++||++.+++.
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 22367889999999999999999999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=274.39 Aligned_cols=239 Identities=19% Similarity=0.279 Sum_probs=191.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.-||.|+||.||-++. .+...||||++.....+. .+.-.+..+||..|.+++|||+|.+.||+.... -.+|||||
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs--~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~--TaWLVMEY 107 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH--TAWLVMEY 107 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeecccccccc--HHHHHHHHHHHHHHHhccCCCcccccceeeccc--hHHHHHHH
Confidence 5799999999999986 467889999997655332 223457899999999999999999999998766 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
| -||-.|++.-.. +++....+..|+.|+..||+|||+. +.||||||+.||||++.+.+|++|||.|.+..+..+.
T Consensus 108 C-lGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF 182 (948)
T KOG0577|consen 108 C-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF 182 (948)
T ss_pred H-hccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchhcc
Confidence 9 568888875332 4788889999999999999999999 9999999999999999999999999999988765544
Q ss_pred cccc----ccC---CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 548 SDDI----ENS---VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 548 ~~~~----~~~---~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.++. |+. +..+.|+-|.||||+||+..||.-+++|+...+..+..-.+.. .+ .|.+. ..+.
T Consensus 183 vGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQ--Ne--------sPtLq--s~eW 250 (948)
T KOG0577|consen 183 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--NE--------SPTLQ--SNEW 250 (948)
T ss_pred cCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHh--cC--------CCCCC--Cchh
Confidence 4332 332 2346789999999999999999999999877654333222221 11 12222 3456
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.++..|+++-|.+|||.++++..
T Consensus 251 S~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 251 SDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 6789999999999999999999998864
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=271.95 Aligned_cols=251 Identities=13% Similarity=0.147 Sum_probs=179.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC------Cce
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP------FNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~~ 461 (680)
+.||+|++|.||+|+.. +++.++||++......+ .....+.+|++++++++|+||+++++++.+... ...
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 90 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD---GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSV 90 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC---CcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceE
Confidence 78999999999999975 68899999886544222 112356789999999999999999998765431 136
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++|+||+.. +|.+.+... ...+++.....++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 91 ~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 91 YMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred EEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 899999964 777777543 34699999999999999999999998 9999999999999999999999999999865
Q ss_pred CCCCCcc-------------------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC
Q 005734 542 LPKSKVS-------------------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 542 ~~~~~~~-------------------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
....... ...|+... ...++.++|||||||+++||++|+.||.+.......+.+......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT 245 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 4321110 11122221 124678899999999999999999999765433322222222111
Q ss_pred CCC--------cccccC--------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 602 PRN--------FSCMID--------PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 602 ~~~--------~~~~~d--------~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
... .....+ +.+..........+.+++.+|++.+|++|||+.|++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 100 000000 0000000112256889999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=268.87 Aligned_cols=237 Identities=19% Similarity=0.281 Sum_probs=183.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|++|.||+++.. +|..|++|+....... .....+.+..|++++.+++ |+||+++++++.+++ ..++||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~ 81 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI--KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE--NLYFVL 81 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhcc--chHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc--eEEEEE
Confidence 378999999999999975 7899999988653221 1233467889999999998 999999999998777 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++++|.+++... ..+++..+..|+.+++.||+|||+. +++|+||||+||+++.++.++++|||++.......
T Consensus 82 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 82 EYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 999999999999644 3699999999999999999999998 99999999999999999999999999987654322
Q ss_pred Cc----------------------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHH
Q 005734 546 KV----------------------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAAD 597 (680)
Q Consensus 546 ~~----------------------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~ 597 (680)
.. ....|+.......+.++||||||++++|+++|+.||........ ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~ 233 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT---FQK 233 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH---HHH
Confidence 10 00112222233467789999999999999999999975432221 122
Q ss_pred HhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCH----HHHHH
Q 005734 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTM----NDIIV 647 (680)
Q Consensus 598 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm----~ev~~ 647 (680)
....... .+......+.+++.+|++.+|++||++ +++++
T Consensus 234 ~~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 234 ILKLEYS-----------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHhcCCC-----------CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 2111111 111223678999999999999999999 66654
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=259.71 Aligned_cols=231 Identities=19% Similarity=0.244 Sum_probs=180.4
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
||+|++|.||+++.. +++.+++|.+....... ......+..|++++++++|+||+++++.+..+. ..++||||++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~~~ 76 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIK--RKEVEHTLTERNILSRINHPFIVKLHYAFQTEE--KLYLVLEYAP 76 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcc--hHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC--eeEEEEecCC
Confidence 699999999999975 58899999876543221 234567899999999999999999999988776 6799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC---
Q 005734 470 NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK--- 546 (680)
Q Consensus 470 ~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~--- 546 (680)
+++|.+++... ..+++.....++.++++||.|||+. +++|+||||+||++++++.++|+|||++........
T Consensus 77 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~ 151 (250)
T cd05123 77 GGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTN 151 (250)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCccc
Confidence 99999999644 3689999999999999999999997 999999999999999999999999999877643211
Q ss_pred -----cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 -----VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 -----~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.....|+.......+.++||||||+++||+++|+.||..... .+...........+. ....
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~-----------~~~~ 217 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILKDPLRFP-----------EFLS 217 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhcCCCCCC-----------CCCC
Confidence 011123333334467889999999999999999999975442 222222222111111 1113
Q ss_pred HHHHHHHHHccccCCCCCCCHHH
Q 005734 622 EAICEVIKECIKTDLRQRPTMND 644 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~e 644 (680)
.++.+++.+|+..+|++||++.+
T Consensus 218 ~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 218 PEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHHHhcCCHhhCCCccc
Confidence 67889999999999999999954
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=274.04 Aligned_cols=260 Identities=12% Similarity=0.151 Sum_probs=183.5
Q ss_pred HHHHHhhhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 379 ELDTACEDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 379 ~l~~~~~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
++...++.|. +.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|++++.+++|+||+++++++..
T Consensus 11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---SIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch---hhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 4445556665 7899999999999986 5789999998864321 12234568889999999999999999998864
Q ss_pred CCC----CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeE
Q 005734 456 DEP----FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAK 531 (680)
Q Consensus 456 ~~~----~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 531 (680)
... ...+++++++ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEE
Confidence 321 1357788877 7899888753 2589999999999999999999998 999999999999999999999
Q ss_pred EcccccccccCCCCCccc-----ccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC-CCC
Q 005734 532 VAEICFTTIALPKSKVSD-----DIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE-PRN 604 (680)
Q Consensus 532 i~DFGla~~~~~~~~~~~-----~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~-~~~ 604 (680)
|+|||+++.......... ..|+.... ...+.++|||||||+++||++|+.||...........+...... +..
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (345)
T cd07877 161 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 240 (345)
T ss_pred EecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999999886543221111 11222211 34678899999999999999999999653322211111111110 000
Q ss_pred cc----------------cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 FS----------------CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 ~~----------------~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.. ..-.............++.+++.+|++.+|.+||++.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 241 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00 000000000001123568899999999999999999999865
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=270.62 Aligned_cols=241 Identities=20% Similarity=0.292 Sum_probs=191.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|.||.||+++.+ +|+.+|+|++....... ......+.+|+++|+++. |||||.+.+.+.+.. ..++||
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~--~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~--~~~lvm 115 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG--KEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD--SVYLVM 115 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccc--cccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC--eEEEEE
Confidence 479999999999999986 49999999997654322 123467899999999998 999999999999988 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC----CCeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD----YAAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~----~~~ki~DFGla~~~ 541 (680)
|++.+|.|.+.+... .++......++.+++.|++|||+. +|+||||||+|+|+... +.+|++|||+++..
T Consensus 116 EL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 999999999999755 389999999999999999999998 99999999999999643 47999999999988
Q ss_pred CCCCCcc--cccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS--DDIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~--~~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...++|.+| ..++.+.||||.||++|.|++|..||.+..+..... ....... .+-++
T Consensus 190 ~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~---~i~~~~~---~f~~~--- 260 (382)
T KOG0032|consen 190 KPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL---AILRGDF---DFTSE--- 260 (382)
T ss_pred cCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH---HHHcCCC---CCCCC---
Confidence 7522211 222344333 467889999999999999999999998765332222 2221111 11111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.....+.+++..|+..||..|+|+.++++.
T Consensus 261 -~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 261 -PWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -CccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 223334788999999999999999999999985
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=273.89 Aligned_cols=267 Identities=13% Similarity=0.177 Sum_probs=188.4
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||++.. .+|..||||++...... ......+.+|++++++++|+||+++++++..... ...++
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 97 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS---ELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYL 97 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccc---hHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEE
Confidence 7899999999999986 47899999987543211 2234568899999999999999999999875432 13589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+ +++|.+++.. ..+++..+..++.|+++||+|||.. +|+||||||+||++++++.+|++|||+++....
T Consensus 98 v~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 98 VMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred EEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 99999 7799888753 3589999999999999999999998 999999999999999999999999999986543
Q ss_pred CCCccc-----ccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC-CCC------------
Q 005734 544 KSKVSD-----DIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE-PRN------------ 604 (680)
Q Consensus 544 ~~~~~~-----~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~-~~~------------ 604 (680)
...... ..|+.... ...+.++|||||||+++|+++|+.||...........+...... +..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
T cd07880 171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKN 250 (343)
T ss_pred CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHH
Confidence 221111 11222211 24678899999999999999999999754322111111110000 000
Q ss_pred ----cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH--HHHHHhhccCCCCCCCCCC
Q 005734 605 ----FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII--VQLRQVINISPEQAVPRLS 665 (680)
Q Consensus 605 ----~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~--~~L~~i~~~~~~~~~~~~~ 665 (680)
+...-...+.........++.+++.+|++.+|++|||+.+++ ..++.......+...+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (343)
T cd07880 251 YVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETEAPPYD 317 (343)
T ss_pred HHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccccCCCCcc
Confidence 000000001011112335688999999999999999999999 4466665555554444433
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=260.71 Aligned_cols=228 Identities=14% Similarity=0.181 Sum_probs=171.5
Q ss_pred cCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEEec
Q 005734 391 IDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
+|+|+||.||++... ++..+|+|........ . .|+.....+ +|+||+++++++...+ ..++||||+
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--------~--~e~~~~~~~~~h~~iv~~~~~~~~~~--~~~iv~e~~ 91 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN--------A--IEPMVHQLMKDNPNFIKLYYSVTTLK--GHVLIMDYI 91 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc--------h--hhHHHHHHhhcCCCEEEEEEEEecCC--eeEEEEEcC
Confidence 599999999999974 6788999887543211 1 122222212 6999999999998877 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCCCCc
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~~~~ 547 (680)
++|+|.+++.... .++|.+...++.|+++||+|||+. +++||||||+||+++.++ .++|+|||+++........
T Consensus 92 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 166 (267)
T PHA03390 92 KDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCY 166 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccC
Confidence 9999999996543 799999999999999999999998 899999999999999988 9999999998776533221
Q ss_pred c----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc--HHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 548 S----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS--IEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 ~----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
. ...|+......+++++|||||||+++||+||+.||....... ...+.... ..... ......
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~ 234 (267)
T PHA03390 167 DGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLP-----------FIKNVS 234 (267)
T ss_pred CCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCC-----------cccccC
Confidence 1 223444444566888999999999999999999997543222 22222221 11100 111233
Q ss_pred HHHHHHHHHccccCCCCCCC-HHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRPT-MNDIIV 647 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPt-m~ev~~ 647 (680)
..+.+++.+|++.+|.+||+ ++++++
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 235 KNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHHHHHhccChhhCCchHHHHhc
Confidence 67899999999999999996 688874
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=266.88 Aligned_cols=248 Identities=13% Similarity=0.156 Sum_probs=167.1
Q ss_pred ccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHH------HHHHHHHHHHHHHcCCCCcccceeeEEecCC
Q 005734 388 SNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKS------QEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 457 (680)
.++||+|+||+||+|...+ +..+++|+............ .......+...+..++|+|++++++++....
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~ 96 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKR 96 (294)
T ss_pred eeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEec
Confidence 4789999999999999754 34566665433221111000 1122334455667779999999999876543
Q ss_pred C--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 458 P--FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 458 ~--~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
. ...++++|++.. ++.+.+... ...++.....|+.|+++||+|||+. +|+||||||+|||++.++.++|+||
T Consensus 97 ~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 97 CRMYYRFILLEKLVE-NTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred CCceEEEEEEehhcc-CHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEc
Confidence 2 134677887743 666665422 2357888999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCc----------ccc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHH-HH
Q 005734 536 CFTTIALPKSKV----------SDD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAA-DY 598 (680)
Q Consensus 536 Gla~~~~~~~~~----------~~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~-~~ 598 (680)
|+++........ ... .++......++.++|||||||+++||+||+.||..... ........ ..
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~ 250 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDF 250 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHH
Confidence 999876421100 001 12222334568899999999999999999999976521 22211111 11
Q ss_pred hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
..... .... ....++.++.+++..|+..+|++||++.++.+.|
T Consensus 251 ~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 251 IKRLH------EGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhh------hhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11000 0000 0112246789999999999999999999998876
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=276.88 Aligned_cols=250 Identities=12% Similarity=0.182 Sum_probs=181.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
..||+|++|.||+|+.. ++..||||++..... .....+.+.+|+.++++++|+|++++++++...+. ...++
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 97 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ---SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYL 97 (343)
T ss_pred EEeccCCceEEEEEEECCCCcEEEEEecccccc---hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEE
Confidence 88999999999999985 678999998754321 12334567889999999999999999998765442 13699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+ +++|.+++.. ..+++..+.+++.++++||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 98 v~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 98 VTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred EEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccccccccc
Confidence 99999 6799998864 3689999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcccc-----cccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-Cc-----------
Q 005734 544 KSKVSDD-----IENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-NF----------- 605 (680)
Q Consensus 544 ~~~~~~~-----~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~----------- 605 (680)
....... .|+.... ...+.++|||||||+++|++||+.||...........+......+. .+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
T cd07851 171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARN 250 (343)
T ss_pred cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHH
Confidence 2111111 1222111 2467889999999999999999999975443222222222111100 00
Q ss_pred -----ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 -----SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 -----~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+.+.........++.+++.+|++.+|++|||+.+|++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 251 YIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0000000000001124678999999999999999999999763
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=257.54 Aligned_cols=243 Identities=16% Similarity=0.269 Sum_probs=194.6
Q ss_pred cccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.++-+|.||.||+|.+. +.+.|-||.++.. ..+-+...|..|--++..+.|||+..+.|.|.+... ..+
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~----AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~-~P~ 364 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH----ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA-TPF 364 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc----ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC-cce
Confidence 68889999999999764 3345666655432 234456779999999999999999999999987653 468
Q ss_pred EEEEecCCCChhhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 463 MVFEYAPNGTVFEHLHIK------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
.+|.++--|+|..+|... ..+.++-.+...+|.|++.|++|||.. ++||.||..+|+++|+...+||+|-.
T Consensus 365 V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 365 VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccch
Confidence 999999999999999722 235677788999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 537 FTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 537 la~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
++|-+.+..... ....+......++..+|||||||+||||+| |+.||.+-++.+...++.+..+ +
T Consensus 442 LSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR----l 517 (563)
T KOG1024|consen 442 LSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR----L 517 (563)
T ss_pred hccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce----e
Confidence 998776443322 112233345567889999999999999999 9999987766666555544332 2
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
. .+-+|+++++.+|..||+..|++||++++++.-|.+.
T Consensus 518 a---------QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 518 A---------QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred c---------CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 2 2345778999999999999999999999999988875
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=271.36 Aligned_cols=255 Identities=15% Similarity=0.200 Sum_probs=183.1
Q ss_pred Hhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 383 ACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 383 ~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
.++.|. +.||+|+||.||++... +|..||||++...... ....+.+.+|++++.+++||||+++.+++.....
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~- 83 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST---PVLAKRTYRELKLLKHLRHENIISLSDIFISPLE- 83 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc---cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC-
Confidence 345554 89999999999999864 7899999987543211 2234567899999999999999999999876432
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
..++|+||+ +++|.+++.. ..+++.....++.+++.||+|||+. +|+||||||+||++++++.++|+|||+++
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 578999999 5689988853 3578888899999999999999998 99999999999999999999999999987
Q ss_pred ccCCCCCcc-----cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-CCc-ccccCc
Q 005734 540 IALPKSKVS-----DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-RNF-SCMIDP 611 (680)
Q Consensus 540 ~~~~~~~~~-----~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~-~~~~d~ 611 (680)
......... ...|+.... ...+.++||||||++++||+||+.||...........+......+ ... ....+.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 157 IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred ccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccch
Confidence 654321111 112333222 356788999999999999999999997543222222222111110 000 000000
Q ss_pred -------ccC---C-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 612 -------SLK---S-----FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 612 -------~l~---~-----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+. . .......++.+++.+|++.+|++||++++++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0 001123678999999999999999999999764
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=271.05 Aligned_cols=258 Identities=13% Similarity=0.194 Sum_probs=190.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC---CCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE---PFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~l 463 (680)
.+.||.|++|.||+|+.. +|..++||++..... .....+.+.+|+++++.++|+||+++.+++.... ....++
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD---DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc---cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 478999999999999975 588999998865431 1234567899999999999999999999987653 114699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||++ ++|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++++++.++|+|||++.....
T Consensus 82 v~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 82 VTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred Eecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 999997 58999886433 799999999999999999999998 999999999999999999999999999987654
Q ss_pred CCC----cc-------cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccccc
Q 005734 544 KSK----VS-------DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMI 609 (680)
Q Consensus 544 ~~~----~~-------~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 609 (680)
... .. ...|+..... ..+.++||||||++++||+||+.||......+....+......+.. .....
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 235 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFIT 235 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcc
Confidence 321 00 1113322223 5678899999999999999999999765433333322222211110 00000
Q ss_pred Ccc---------------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhc
Q 005734 610 DPS---------------LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVIN 654 (680)
Q Consensus 610 d~~---------------l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~ 654 (680)
... +.....+....+.+++.+||+.+|++||++++++.. ++.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 236 SEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred ccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 000 000111234678999999999999999999999985 666554
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=245.88 Aligned_cols=239 Identities=17% Similarity=0.283 Sum_probs=180.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
..||.|+.|.|+|++.. +|..+|||.+..... ++..+.....++++.+.+ .|.||+.+||+..+. ...+.||
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N----kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~--dV~IcMe 171 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN----KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT--DVFICME 171 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCC----HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc--hHHHHHH
Confidence 57899999999999985 689999999875543 344566777788877775 899999999998776 5678899
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
.|.- .++.++. +-..+++....-++...+.+||.||..++ +|+|||+||+|||+|+.|++|++|||++-.+.....
T Consensus 172 lMs~-C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 172 LMST-CAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHHH-HHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccc
Confidence 9843 4555554 23346888778889999999999999775 899999999999999999999999999987764322
Q ss_pred c--ccccccCCCCCCC--------CCCCCeeehhHHHHHHHhCCCCCCccc-cccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 V--SDDIENSVLPPLA--------DPETNIYSFGILMLEIISGKLPYCEEK-ELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ~--~~~~~~~~~~~~~--------s~~sDVySfGvvllElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
. +...+.|.+|++. +-++|||||||.++||.||+.||.+.. +.+....+.. .++ ..+++..
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln--~eP----P~L~~~~-- 319 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN--EEP----PLLPGHM-- 319 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh--cCC----CCCCccc--
Confidence 2 2233455555554 445999999999999999999998643 2333333222 111 1122211
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+.++...|+..|+.+||...+++++
T Consensus 320 ---gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 320 ---GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ---CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 134678999999999999999999988764
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=281.41 Aligned_cols=254 Identities=13% Similarity=0.142 Sum_probs=167.4
Q ss_pred cccCCCCCCeEEEEEeCC--CCEEEEEEeeecc------------chhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEe
Q 005734 389 NIIDTQSGCTIYKGTLSS--GVEIAVAATAITS------------SKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCE 454 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--g~~vaVK~~~~~~------------~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 454 (680)
+.||+|+||+||++..+. +...++|.+.... ...........+.+|++++++++|+|||++++++.
T Consensus 154 ~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 233 (501)
T PHA03210 154 DDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEILR 233 (501)
T ss_pred eEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEEEE
Confidence 899999999999987642 2222222110000 00011223456889999999999999999999999
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeE
Q 005734 455 DDEPFNRMMVFEYAPNGTVFEHLHIKE---MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAK 531 (680)
Q Consensus 455 ~~~~~~~~lV~ey~~~GsL~~~l~~~~---~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 531 (680)
..+ ..++|+|++. ++|.+++.... .......+..+|+.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 234 ~~~--~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~~~~vk 307 (501)
T PHA03210 234 SEA--NTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCDGKIV 307 (501)
T ss_pred ECC--eeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 877 6799999994 57887775332 12233556778999999999999998 999999999999999999999
Q ss_pred EcccccccccCCCCC---------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCC-CCcccc---ccHHHHHHHH
Q 005734 532 VAEICFTTIALPKSK---------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLP-YCEEKE---LSIEKWAADY 598 (680)
Q Consensus 532 i~DFGla~~~~~~~~---------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p-~~~~~~---~~~~~~~~~~ 598 (680)
|+|||+++....... .....|+......++.++|||||||++|||++|+.+ +..... ..+.+.+...
T Consensus 308 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~ 387 (501)
T PHA03210 308 LGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSL 387 (501)
T ss_pred EEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhc
Confidence 999999987643211 111224444445578889999999999999998754 432221 1111111111
Q ss_pred hcCCCCccc-------ccC-cccCC----CC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 599 LNEPRNFSC-------MID-PSLKS----FK-----QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 599 ~~~~~~~~~-------~~d-~~l~~----~~-----~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......+.. .++ ..+.. .. ......+.+++.+|++.||++|||+.|++..
T Consensus 388 ~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 388 SVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred ccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000000000 000 00000 00 0112456778999999999999999999864
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-30 Score=273.05 Aligned_cols=259 Identities=15% Similarity=0.225 Sum_probs=185.8
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~ 462 (680)
.+.||+|+||.||+|+. .+|+.||||..+.... ....+...+|+++|++++|+|||++++.-.+.. .....
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~----~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS----LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcc----cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 37899999999999995 5899999998865331 234567889999999999999999998866544 23679
Q ss_pred EEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--cCCCC--eEEccccc
Q 005734 463 MVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL--TDDYA--AKVAEICF 537 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~-~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--d~~~~--~ki~DFGl 537 (680)
+|||||.+|||+..|... +...|+..+.+.+..+++.||.|||+. +|+||||||.||++ .+++. -||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 999999999999999754 456799999999999999999999988 99999999999999 33343 69999999
Q ss_pred ccccCCCCCccc--ccccCCC------CCCCCCCCCeeehhHHHHHHHhCCCCCCccc-cccHHHHHHHH-hcCCCCccc
Q 005734 538 TTIALPKSKVSD--DIENSVL------PPLADPETNIYSFGILMLEIISGKLPYCEEK-ELSIEKWAADY-LNEPRNFSC 607 (680)
Q Consensus 538 a~~~~~~~~~~~--~~~~~~~------~~~~s~~sDVySfGvvllElltG~~p~~~~~-~~~~~~~~~~~-~~~~~~~~~ 607 (680)
||.+..++.... ..++|.. ..+++...|.|||||++||.+||..||-... +....+..... .+.+.....
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 999876653322 1233332 2567788999999999999999999995322 11111111111 112211111
Q ss_pred ccCccc----------C---CCCHHHHHHHHHHHHHccccCCCCCC--CHHHHHHHHHHhh
Q 005734 608 MIDPSL----------K---SFKQNELEAICEVIKECIKTDLRQRP--TMNDIIVQLRQVI 653 (680)
Q Consensus 608 ~~d~~l----------~---~~~~~~~~~~~~l~~~C~~~~P~~RP--tm~ev~~~L~~i~ 653 (680)
..++.. + .........+.......+..+|++|- ...+....+..|.
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence 122111 1 12233445566666677777888887 6666666666654
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-31 Score=246.63 Aligned_cols=239 Identities=13% Similarity=0.247 Sum_probs=182.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|.|+.||++.. ++|+.+|+|.+..+... .....+..+|+++-+.++|||||+|.....+.. ..|+|+|+
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~---~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~--~~ylvFe~ 91 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDL 91 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc---cccHHHHHHHHHHHHhcCCCcEeehhhhhcccc--eeEEEEec
Confidence 7899999999999986 57899999988654422 234567889999999999999999999888776 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALPK 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~~~ 544 (680)
|.+|+|..-+-.+ ...+....-....||..+|.|+|.. +|||||+||+|+||-. .--+|++|||+|..+...
T Consensus 92 m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g 166 (355)
T KOG0033|consen 92 VTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG 166 (355)
T ss_pred ccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence 9999998766332 3466677778899999999999999 9999999999999953 234799999999988633
Q ss_pred CCccc--ccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVSD--DIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~~--~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
....+ ..|.+..| ..++..+|||+-||||+-|+.|..||.+.....+.+.+ ......+. .+.+.
T Consensus 167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I---~~g~yd~~---~~~w~--- 237 (355)
T KOG0033|consen 167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQI---KAGAYDYP---SPEWD--- 237 (355)
T ss_pred cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHH---hccccCCC---CcccC---
Confidence 22221 12344333 45677899999999999999999999875444444433 22211111 11222
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...++..+|+.+|+..||.+|.|+.|.++
T Consensus 238 -~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 238 -TVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -cCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 22367889999999999999999998874
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=250.89 Aligned_cols=240 Identities=16% Similarity=0.218 Sum_probs=184.5
Q ss_pred cccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||+|.-|+||.+.+.+ +..+|+|++.+..... .+...+...|-++|+.++||.+++|++.+..++ ..+|||||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~--rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~--~~cl~mey 158 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS--RKKLKRAQTEREILSLLDHPFLPTLYASFETDK--YSCLVMEY 158 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh--hhHHHHHHHHHHHHHhcCCCccchhhheeeccc--eeEEEEec
Confidence 689999999999999864 5889999997554322 334456778899999999999999999999888 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
|+||+|..+.+.+.+..++.....-+|.+|.-||+|||-. +||.|||||+||||-++|++.++||.|+.......
T Consensus 159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 9999999999888888999999999999999999999999 99999999999999999999999999986543100
Q ss_pred ----C-----c------------------ccc------------cccC-------------CCCCCCCC----------C
Q 005734 546 ----K-----V------------------SDD------------IENS-------------VLPPLADP----------E 563 (680)
Q Consensus 546 ----~-----~------------------~~~------------~~~~-------------~~~~~~s~----------~ 563 (680)
. . ... .++. +..+|..| .
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA 315 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA 315 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCch
Confidence 0 0 000 0000 11223333 3
Q ss_pred CCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCC--
Q 005734 564 TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT-- 641 (680)
Q Consensus 564 sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt-- 641 (680)
.|.|+|||++|||+.|+-||.+.... +.+...+..+-.+. +. .+....+.+||++.+.+||++|..
T Consensus 316 VDWWtfGIflYEmLyG~TPFKG~~~~---~Tl~NIv~~~l~Fp--------~~-~~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 316 VDWWTFGIFLYEMLYGTTPFKGSNNK---ETLRNIVGQPLKFP--------EE-PEVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred hhHHHHHHHHHHHHhCCCCcCCCCch---hhHHHHhcCCCcCC--------CC-CcchhHHHHHHHHHhccChhhhhccc
Confidence 79999999999999999999875422 22333333322211 11 134467899999999999999998
Q ss_pred --HHHHHH
Q 005734 642 --MNDIIV 647 (680)
Q Consensus 642 --m~ev~~ 647 (680)
+.||-+
T Consensus 384 rGA~eIK~ 391 (459)
T KOG0610|consen 384 RGAAEIKR 391 (459)
T ss_pred cchHHhhc
Confidence 555543
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-31 Score=255.11 Aligned_cols=237 Identities=17% Similarity=0.238 Sum_probs=187.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
-..+|+|+||+|||+.++ .|+.||||.+.+.. ...+..+|+.++.+++.|++|+++|.+.... ..++|||
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-------DLQEIIKEISIMQQC~S~yVVKYYGSYFK~s--DLWIVME 108 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-------DLQEIIKEISIMQQCKSKYVVKYYGSYFKHS--DLWIVME 108 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCccc-------hHHHHHHHHHHHHHcCCchhhhhhhhhccCC--ceEeehh
Confidence 478999999999999975 79999999987654 3457899999999999999999999988766 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS- 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~- 545 (680)
||--|+..+.++.+ +++|+..+...|..+..+||+|||.. .-+|||||+.||||+-+|.+|++|||.|..+...-
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence 99999999999754 46899999999999999999999988 78999999999999999999999999997765321
Q ss_pred ---Cccc----ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 ---KVSD----DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ---~~~~----~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
+..+ ..|+....--++.++||||+|++..||..|++||.+-.+....- .+.. . . .|.+ .-++
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF----MIPT-~-P----PPTF-~KPE 253 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF----MIPT-K-P----PPTF-KKPE 253 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE----eccC-C-C----CCCC-CChH
Confidence 1111 11222222346888999999999999999999997543211000 0000 0 0 0111 2245
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+...++.+++++|+...|++|-|+-++++.
T Consensus 254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 254 EWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 667899999999999999999999888764
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=269.02 Aligned_cols=249 Identities=14% Similarity=0.232 Sum_probs=176.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC--------
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP-------- 458 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-------- 458 (680)
.+.||.|+||.||+|... +|..||+|.+..... ...+.+.+|++++++++||||+++++++.....
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 378999999999999874 688999998865542 234668899999999999999999987764321
Q ss_pred ----CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEc
Q 005734 459 ----FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVA 533 (680)
Q Consensus 459 ----~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~ 533 (680)
...++|+||++ ++|.+++.. ..+++.....++.|++.||.|||+. +|+||||||+||+++ ++..+|++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEEC
Confidence 13589999997 589888753 3589999999999999999999998 999999999999997 45678999
Q ss_pred ccccccccCCCCCc-----------ccccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC
Q 005734 534 EICFTTIALPKSKV-----------SDDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 534 DFGla~~~~~~~~~-----------~~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
|||+++........ ....|+.. .+..++.++|||||||++|||++|+.||....+.............
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999765321110 01123321 1234677899999999999999999999754322211111111000
Q ss_pred CC--Ccc-------ccc-----Cc--ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 602 PR--NFS-------CMI-----DP--SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 602 ~~--~~~-------~~~-----d~--~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.. ... ... .+ ...........++.+++.+|++.||++|||+.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00 000 000 00 0000011223578899999999999999999999853
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-29 Score=265.10 Aligned_cols=252 Identities=13% Similarity=0.109 Sum_probs=177.5
Q ss_pred ccccCCCCCCeEEEEEeC-C--CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecC--CCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS-S--GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDD--EPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~--g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~~ 461 (680)
.+.||+|+||.||+++.. + +..+|||++...... ....+.+.+|++++.++ .|+||+++++++... .....
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK---KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc---chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 478999999999999975 3 778999987643211 12345678899999999 499999999986532 11246
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++++||+. ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 82 ~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 82 YLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 78888885 699998854 34689999999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCCc------------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--Ccc
Q 005734 542 LPKSKV------------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFS 606 (680)
Q Consensus 542 ~~~~~~------------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 606 (680)
...... ....|+.... ...+.++|||||||+++|+++|+.||.........+.+......+. ...
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 421110 0111222111 2457789999999999999999999875432222222211111100 000
Q ss_pred cccC---------------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 607 CMID---------------PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 607 ~~~d---------------~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+.+ ..+..........+.+++.+|++.+|++|||+.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 00000111123578899999999999999999998754
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=260.70 Aligned_cols=237 Identities=18% Similarity=0.289 Sum_probs=181.4
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||.||...|||+...+.+.+|+|++.... .+......|..|+..|.+++ |.+||+|+.|-..++ ..|+||||
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~~~---~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~--~lYmvmE~ 441 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVLLE---ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG--YLYMVMEC 441 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHHhh---cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc--eEEEEeec
Confidence 6899999999999999888889988776543 33455678999999999995 999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
-+ -+|..+|..+.....+| .+..+..|+..|+.++|.+ +|||.||||.|+|+-. |..||+|||+|.....+++.
T Consensus 442 Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 442 GD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred cc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCccccc
Confidence 84 49999998777666667 6677889999999999999 9999999999999975 67999999999987754322
Q ss_pred c-----cccccCCCC----------------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 548 S-----DDIENSVLP----------------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 548 ~-----~~~~~~~~~----------------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
- .....|+.| -..++++||||+|||||+|+.|+.||..- .....+ +.
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-----~n~~aK-------l~ 583 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-----INQIAK-------LH 583 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-----HHHHHH-------HH
Confidence 1 111222211 13578899999999999999999999532 211111 11
Q ss_pred cccCcccC-CCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 607 CMIDPSLK-SFKQ-NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 607 ~~~d~~l~-~~~~-~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+.||... ++++ ....++.++|+.|++.||++||+..++++.
T Consensus 584 aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 584 AITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred hhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 22333221 1111 011348999999999999999999999863
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-31 Score=295.28 Aligned_cols=236 Identities=18% Similarity=0.240 Sum_probs=180.2
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||.|.||.||.|.. .+|...|||-++..... ....+...+|+.++..++|||+|+++|.-.+.+ ..+|.|||
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~---~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe--kv~IFMEy 1315 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD---HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE--KVYIFMEY 1315 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccc---cccCcchHHHHHHHHhccCccccccCceeecHH--HHHHHHHH
Confidence 7999999999999984 67899999977665433 344567889999999999999999999998887 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC-C
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-K 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-~ 546 (680)
|++|+|.+.+.... ..+..--.-+..|++.|++|||+. +||||||||.||+||.+|.+|.+|||.|....... .
T Consensus 1316 C~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1316 CEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred hccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence 99999999985332 345554555778999999999999 99999999999999999999999999998876442 1
Q ss_pred ccc------ccccCCCCCCCC--------CCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccCc
Q 005734 547 VSD------DIENSVLPPLAD--------PETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 547 ~~~------~~~~~~~~~~~s--------~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..+ ..+.|++|+.++ -++||||+|||++||+||++||...+. ..+.-.+. ..+
T Consensus 1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~--~gh---------- 1458 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA--AGH---------- 1458 (1509)
T ss_pred CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh--ccC----------
Confidence 111 123344444332 238999999999999999999976432 11111111 111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++....+-.+++.+|+..||++|.++.|+++
T Consensus 1459 -~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1459 -KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred -CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 11233445567889999999999999988776654
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-30 Score=267.29 Aligned_cols=238 Identities=16% Similarity=0.220 Sum_probs=182.0
Q ss_pred cccCCCCCCeEEEEEeCCCCE-EEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVE-IAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~-vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.-||.|+||.|||++.++... .|.|++..+. .....+|+-|+++|..++||+||+|++.|...+ ..++..||
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetks-----eEELEDylVEIeILa~CdHP~ivkLl~ayy~en--kLwiliEF 110 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKS-----EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN--KLWILIEF 110 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccc-----hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC--ceEEEEee
Confidence 357899999999999875444 4556665554 345678999999999999999999998877666 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC---
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK--- 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~--- 544 (680)
|.||..+.++-.- +..|+..++.-++++++.||.|||+. .|||||||+.|||+.-+|.++++|||.+-.....
T Consensus 111 C~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 111 CGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred cCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence 9999999887543 34799999999999999999999999 9999999999999999999999999987543311
Q ss_pred -CCccc----ccc-----cCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 545 -SKVSD----DIE-----NSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 545 -~~~~~----~~~-----~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
.+..+ ..| ++.-...|+.++|||||||+|.||.-+.+|..+..+..+.-.+.+ .++.. .+.
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaK--SePPT---Llq---- 257 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--SEPPT---LLQ---- 257 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhh--cCCCc---ccC----
Confidence 11111 112 222345678899999999999999999999876543322211111 12111 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+......+.++..+|+..+|..||++.++++.
T Consensus 258 --PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 258 --PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred --cchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 23344678999999999999999999999863
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=264.87 Aligned_cols=237 Identities=18% Similarity=0.315 Sum_probs=182.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
...||+|.|+.|..|+.. +|..||+|.+...... ......+.+|+++|..++|||||+++.+..... ..|+|||
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln---~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~--~lylV~e 135 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN---PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA--TLYLVME 135 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccC---hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc--eeEEEEE
Confidence 378999999999999974 7899999987644321 223334889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+.+|.+++++.... .........+..|+.+|++|||++ .|||||||++|||||.++++||+|||++..+.....
T Consensus 136 ya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 136 YASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred eccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeeccccc
Confidence 999999999997543 233466667889999999999999 899999999999999999999999999998874332
Q ss_pred ccc--ccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VSD--DIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~~--~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
... ..+.|..| .+..++.|+||+||++|-|+.|..||++.. +.+...+.+.....+...
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~---lk~Lr~rvl~gk~rIp~~---------- 277 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN---LKELRPRVLRGKYRIPFY---------- 277 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc---cccccchheeeeecccce----------
Confidence 221 11223222 366899999999999999999999998743 222222222221111111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+..+++++.+..+|.+|++++++.+.
T Consensus 278 -ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 278 -MSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred -eechhHHHHHHhhccCccccCCHHHhhhh
Confidence 11356789999999999999999999864
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=248.14 Aligned_cols=243 Identities=17% Similarity=0.196 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
..||.|+||+|+|..++ .|+..|||++..... ...++++..|.++..+- ..||||+++|.+...+ ..++-||
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~----~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG--dcWiCME 143 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI----EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG--DCWICME 143 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc----hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC--ceeeeHH
Confidence 47999999999999984 799999999976553 34456788888887666 6999999999998777 7899999
Q ss_pred ecCCCChhhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHL---HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l---~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
.|. -||+.+- +......++....-+|...+.+||.||.... .|+|||+||+|||+|..|.+|++|||++..+..
T Consensus 144 LMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 144 LMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 994 4666543 3334456888888889999999999999764 899999999999999999999999999877653
Q ss_pred CCCcc--cccccCCCCCC-------CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 544 KSKVS--DDIENSVLPPL-------ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 544 ~~~~~--~~~~~~~~~~~-------~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
..... .....|.+|++ ++-+|||||+|++|+|+.||+.||.+-. ++.+.+........ . +++....
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~--svfeql~~Vv~gdp--p-~l~~~~~ 295 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD--SVFEQLCQVVIGDP--P-ILLFDKE 295 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH--HHHHHHHHHHcCCC--C-eecCccc
Confidence 32211 11222333332 4667999999999999999999997532 23444433333211 0 1111110
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.-+....+..++..|+.+|-++||...++.+
T Consensus 296 --~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 296 --CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred --ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1123467899999999999999999998865
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=247.13 Aligned_cols=231 Identities=19% Similarity=0.293 Sum_probs=179.4
Q ss_pred CCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecCCCCh
Q 005734 395 SGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTV 473 (680)
Q Consensus 395 ~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL 473 (680)
+||.||+|+.. +|+.+++|+........ ..+.+.+|++.+++++|+|++++++++.... ..++++||+++++|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK----KRERILREISILKKLKHPNIVRLYDVFEDED--KLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc----HHHHHHHHHHHHHhCCCCcHHHHHhheeeCC--EEEEEEeCCCCCCH
Confidence 58999999986 48999999987554221 1568999999999999999999999998876 67999999999999
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc------
Q 005734 474 FEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV------ 547 (680)
Q Consensus 474 ~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~------ 547 (680)
.+++.... .+++..+..++.+++++++|||.. +++|+||+|+||++++++.++++|||.+.........
T Consensus 75 ~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 149 (244)
T smart00220 75 FDLLKKRG--RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGT 149 (244)
T ss_pred HHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCC
Confidence 99986543 389999999999999999999998 9999999999999999999999999999876543111
Q ss_pred -ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCc-cccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHH
Q 005734 548 -SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCE-EKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAIC 625 (680)
Q Consensus 548 -~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 625 (680)
....|+.......++++||||||++++|+++|+.||.. .......+.... ....... .......++.
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~~ 218 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK---PKPPFPP--------PEWKISPEAK 218 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc---cCCCCcc--------ccccCCHHHH
Confidence 11123333344567899999999999999999999975 222222222221 1110000 0000236789
Q ss_pred HHHHHccccCCCCCCCHHHHHH
Q 005734 626 EVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 626 ~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+++.+|+..+|++||++.++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh
Confidence 9999999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-29 Score=254.85 Aligned_cols=239 Identities=15% Similarity=0.293 Sum_probs=187.2
Q ss_pred hccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
..+.||+|-|..|-.+++ -+|..||||++.+..... .......+||+-|+-++|||||+|+.+..... ..|||.
T Consensus 22 LekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~---~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT--KlyLiL 96 (864)
T KOG4717|consen 22 LEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT---LSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT--KLYLIL 96 (864)
T ss_pred hhhhhcCCceehhhhhhhhcccceeEEEEecccccch---hhhhHHHHHHHHHHHhcCcCeeeeeehhcccc--eEEEEE
Confidence 346899999999999885 489999999997654332 22345789999999999999999999987766 689999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-cCCCCeEEcccccccccCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL-TDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-d~~~~~ki~DFGla~~~~~~ 544 (680)
|.-.+|+|++++-... ..+......++..||..|+.|+|+. .+|||||||+||.+ ..-|.+|+.|||++-.+.+.
T Consensus 97 ELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 9999999999995433 4688888899999999999999998 89999999999877 56688999999999777654
Q ss_pred CCccc-------ccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKVSD-------DIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~~~-------~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
..... ..|+-.. ..|-.|..||||+|||||-|++|+.||.+.++.+- +..++|.... .
T Consensus 173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------------LTmImDCKYt-v 238 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------------LTMIMDCKYT-V 238 (864)
T ss_pred chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------------hhhhhccccc-C
Confidence 32221 1233222 34567889999999999999999999987553322 2223333221 2
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.....+..+|+..|+..||++|-+.+||+..
T Consensus 239 PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 239 PSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred chhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 33445788999999999999999999988754
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=248.92 Aligned_cols=217 Identities=13% Similarity=0.101 Sum_probs=164.8
Q ss_pred CCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecCCCC
Q 005734 394 QSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGT 472 (680)
Q Consensus 394 G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~~Gs 472 (680)
|.+|.||++.. .+|+.+|+|++.... .+.+|...+....||||+++++++.+.+ ..++||||+++|+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~lv~e~~~~~~ 71 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----------EYSRERLTIIPHCVPNMVCLHKYIVSED--SVFLVLQHAEGGK 71 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----------hhhhHHHHHHhcCCCceeehhhheecCC--eEEEEEecCCCCC
Confidence 88999999997 478899999885432 2334555555667999999999998876 6799999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc----
Q 005734 473 VFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS---- 548 (680)
Q Consensus 473 L~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~---- 548 (680)
|.+++... ..+++.....++.+++.||+|||.. +|+||||||+||+++.++.++++|||.+..........
T Consensus 72 L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~ 146 (237)
T cd05576 72 LWSHISKF--LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVEN 146 (237)
T ss_pred HHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCc
Confidence 99998643 3589999999999999999999988 99999999999999999999999999876654321111
Q ss_pred -cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHH
Q 005734 549 -DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEV 627 (680)
Q Consensus 549 -~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l 627 (680)
...|+.......++++||||+|++++||++|+.|+..... .. ...... ..+.....++.++
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~-~~--------~~~~~~---------~~~~~~~~~~~~l 208 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPS-GI--------NTHTTL---------NIPEWVSEEARSL 208 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCch-hc--------cccccc---------CCcccCCHHHHHH
Confidence 1224443344567889999999999999999988753210 00 000000 0111123578899
Q ss_pred HHHccccCCCCCCCHHHH
Q 005734 628 IKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 628 ~~~C~~~~P~~RPtm~ev 645 (680)
+.+|++.||++||++.+.
T Consensus 209 i~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 209 LQQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHHccCCHHHhcCCCcc
Confidence 999999999999997433
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=277.79 Aligned_cols=143 Identities=20% Similarity=0.240 Sum_probs=125.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +++.||||++...... .......+..|++++..++|+||+++++++.... ..++|||
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~--~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lVmE 84 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI--NKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN--NVYLVME 84 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc--CHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC--EEEEEEe
Confidence 378999999999999975 7899999998643321 1334567889999999999999999999988777 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
|+++|+|.++++.. ..+++...++|+.+|+.||+|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 85 y~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 85 YLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999643 3588999999999999999999998 99999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=274.52 Aligned_cols=246 Identities=17% Similarity=0.281 Sum_probs=171.2
Q ss_pred HHhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC--
Q 005734 382 TACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD-- 456 (680)
Q Consensus 382 ~~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-- 456 (680)
+...+|. .+||+||||.|||++.+ ||+.+|||++..+. .....+...+|+.+|++++|||||+++..+.+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~----s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA----SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch----HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 3445666 79999999999999976 89999999998764 133455688999999999999999986521100
Q ss_pred --------------------------------------------------------------------------------
Q 005734 457 -------------------------------------------------------------------------------- 456 (680)
Q Consensus 457 -------------------------------------------------------------------------------- 456 (680)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred -------------------------C----------CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 005734 457 -------------------------E----------PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501 (680)
Q Consensus 457 -------------------------~----------~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL 501 (680)
+ +...||-||||+.-.|+++++.+.... .-..-+++..+|+.||
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGL 710 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHH
Confidence 0 012367789998877777776543211 3456678999999999
Q ss_pred HHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC--------CC-----------Ccccc-------cccCC
Q 005734 502 QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP--------KS-----------KVSDD-------IENSV 555 (680)
Q Consensus 502 ~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~--------~~-----------~~~~~-------~~~~~ 555 (680)
+|+|.. +||||||||.||+||++..+||+|||+|+.... .. ...+. .|+..
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 999999999999999999999999999987220 00 00000 11111
Q ss_pred C-C--CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHcc
Q 005734 556 L-P--PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECI 632 (680)
Q Consensus 556 ~-~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~ 632 (680)
. . ..++.|.|+||+|||++||+. ||.-. .+-+..+ ..++. ..+... ..+..+....-..++.+++
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MERa~iL-~~LR~-g~iP~~-----~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS--MERASIL-TNLRK-GSIPEP-----ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCch--HHHHHHH-Hhccc-CCCCCC-----cccccccchHHHHHHHHHh
Confidence 1 1 257899999999999999996 45321 1111111 12222 112111 1122333345568999999
Q ss_pred ccCCCCCCCHHHHHH
Q 005734 633 KTDLRQRPTMNDIIV 647 (680)
Q Consensus 633 ~~~P~~RPtm~ev~~ 647 (680)
+.||++|||+.|+++
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999985
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=217.64 Aligned_cols=249 Identities=15% Similarity=0.199 Sum_probs=179.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|.||+||||+. .+++.||+|++......+. ...+..+|+.+++.++|+|||+++.....+. ...+|+||
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddeg---vpssalreicllkelkhknivrl~dvlhsdk--kltlvfe~ 82 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG---VPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEF 82 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCC---CcHHHHHHHHHHHHhhhcceeehhhhhccCc--eeEEeHHH
Confidence 6899999999999996 4678899999987664432 2346789999999999999999999987776 67899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|.. +|..+....+ ..++-.....++.|+.+||.|+|++ .+.|||+||.|.|++.+|+.|++|||+++...-....
T Consensus 83 cdq-dlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred hhH-HHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 955 8888775444 4688888999999999999999999 9999999999999999999999999999876532211
Q ss_pred -cc-------ccccCC-CCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCC--ccccc-CcccC
Q 005734 548 -SD-------DIENSV-LPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRN--FSCMI-DPSLK 614 (680)
Q Consensus 548 -~~-------~~~~~~-~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~-d~~l~ 614 (680)
+. ..|... ....+++..|+||-||++.|+.. |++-|.+.+..+..+.+-..+..+.+ ...+- -|...
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk 237 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK 237 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence 10 112111 23457888999999999999998 66667665434444444343333211 11110 01111
Q ss_pred ---CCC---------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 ---SFK---------QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ---~~~---------~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.++ +.....=.++..+.+.-+|.+|.++++.++
T Consensus 238 ~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 111 111123356666677779999999998875
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-28 Score=263.28 Aligned_cols=251 Identities=14% Similarity=0.186 Sum_probs=168.6
Q ss_pred hhhhc--cccCCCCCCeEEEEEe-----------------CCCCEEEEEEeeeccchhh---H------HHHHHHHHHHH
Q 005734 384 CEDFS--NIIDTQSGCTIYKGTL-----------------SSGVEIAVAATAITSSKDW---L------KSQEMAYRKQV 435 (680)
Q Consensus 384 ~~~~~--~~iG~G~~g~Vyk~~~-----------------~~g~~vaVK~~~~~~~~~~---~------~~~~~~f~~E~ 435 (680)
.++|. ++||+|+||+||+|.. .+++.||||++........ . ......+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 44555 9999999999999964 2456899999865431110 0 01123355688
Q ss_pred HHHHcCCCCcc-----cceeeEEecCC------CCceEEEEEecCCCChhhhhccCC----------------------C
Q 005734 436 DTLSRINHKNF-----VNLIGYCEDDE------PFNRMMVFEYAPNGTVFEHLHIKE----------------------M 482 (680)
Q Consensus 436 ~~l~~l~H~ni-----v~l~g~~~~~~------~~~~~lV~ey~~~GsL~~~l~~~~----------------------~ 482 (680)
.++.+++|.++ ++++|||.... ..+.+|||||+++|+|.++++... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 88888877655 77888886421 115799999999999999987421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc----cccccCCCCC
Q 005734 483 DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS----DDIENSVLPP 558 (680)
Q Consensus 483 ~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~~~~ 558 (680)
..++|..+..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......... ...+.|..|+
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 2357888999999999999999998 89999999999999999999999999997653221111 0012222222
Q ss_pred C---------------------------CCCCCCeeehhHHHHHHHhCCC-CCCcccc---------ccHHHHHHHHhcC
Q 005734 559 L---------------------------ADPETNIYSFGILMLEIISGKL-PYCEEKE---------LSIEKWAADYLNE 601 (680)
Q Consensus 559 ~---------------------------~s~~sDVySfGvvllElltG~~-p~~~~~~---------~~~~~~~~~~~~~ 601 (680)
. ...+.||||+||+++||++|.. |+..... .+...|... ...
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~-~~~ 459 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY-KGQ 459 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh-ccc
Confidence 1 1234799999999999999875 6643110 111122111 001
Q ss_pred CCCcccccCcccCCCCHHHHHHHHHHHHHccccCC---CCCCCHHHHHH
Q 005734 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDL---RQRPTMNDIIV 647 (680)
Q Consensus 602 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P---~~RPtm~ev~~ 647 (680)
...+. ..........+++.+++..+| .+|+|++|+++
T Consensus 460 ~~~~~---------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 460 KYDFS---------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CCCcc---------cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 00010 011223578899999999766 68999999985
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=238.17 Aligned_cols=241 Identities=15% Similarity=0.252 Sum_probs=181.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC--CceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP--FNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~--~~~~lV 464 (680)
++||-|-.|.|-.+..+ +|+.+|+|++.- ....++||++.-+. .|||||.++.++...-. ...++|
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D----------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiV 137 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD----------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIV 137 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhc----------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEee
Confidence 79999999999999875 788899887632 12356888887666 59999999998864321 145789
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEccccccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIA 541 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~ 541 (680)
||.|++|.|++.+.++....++..+.-+|+.+|+.|++|||+. +|.||||||+|+|... |-..|++|||+|+.-
T Consensus 138 mE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 138 MECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred eecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccccccc
Confidence 9999999999999888878899999999999999999999999 9999999999999964 556899999999986
Q ss_pred CCCCCcc--cc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS--DD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~--~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... .. .|+...++.++..+|+||+||++|-|++|.+||.......+..-.+..+... .+. +-++
T Consensus 215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g-qy~-FP~p--- 289 (400)
T KOG0604|consen 215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG-QYE-FPEP--- 289 (400)
T ss_pred CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc-Ccc-CCCh---
Confidence 5322211 11 1333445667788999999999999999999997654333222222222110 000 0011
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......+...++++..+..+|.+|.|+.+++..
T Consensus 290 -EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 290 -EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 123345678899999999999999999999864
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-28 Score=234.44 Aligned_cols=250 Identities=18% Similarity=0.302 Sum_probs=184.6
Q ss_pred HHHHHHHhhhhccccCCCCCCeEEEEE-eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEe
Q 005734 377 RLELDTACEDFSNIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCE 454 (680)
Q Consensus 377 ~~~l~~~~~~~~~~iG~G~~g~Vyk~~-~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~ 454 (680)
+.|+-+.| ++++|+|+|+.|-.++ +.+|.++|||++.+.. .+......+||+++...+ |+||+.|+.|+.
T Consensus 75 F~d~YkLt---~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~-----gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLT---SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP-----GHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhH---HHHhcCccceeeeeeeeeccchhhhhhhhhcCC-----chHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 34444444 4789999999999987 5789999999986543 345667889999999995 999999999999
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeE
Q 005734 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAK 531 (680)
Q Consensus 455 ~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~k 531 (680)
++. ..|||||-|.+|+|.++++.+ ..++..+.-++..+||.||.|||.+ +|.||||||+|||-.+-. -+|
T Consensus 147 dd~--~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 147 DDT--RFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred ccc--eEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCcee
Confidence 988 669999999999999999654 3688889999999999999999999 999999999999996543 379
Q ss_pred EcccccccccCCCCCccc----------ccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-
Q 005734 532 VAEICFTTIALPKSKVSD----------DIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKELS- 590 (680)
Q Consensus 532 i~DFGla~~~~~~~~~~~----------~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~- 590 (680)
|+||.+..-..-....+. ...++++| .+++.++|.||+|||+|-|+.|..||.+.-..+
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 999988755431111110 01122222 356888999999999999999999996432110
Q ss_pred ----------HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 591 ----------IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 591 ----------~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
-.+.+-..++++. + ++-|.. ......+..+++...+..++.+|.++.++++
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGk-Y-eFPdkd----WahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGK-Y-EFPDKD----WAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccC-C-cCChhh----hHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0111111122211 0 111111 1223467788899999999999999999987
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=245.45 Aligned_cols=237 Identities=14% Similarity=0.165 Sum_probs=187.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+||||.||-+... +|+.+|.|++.+++.+. +..+.-...|-++|.++..+.||.+--.+...+ ..++|+..
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKk--r~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd--~LClVLtl 266 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKK--RKGETMALNEKQILEKVSSPFIVSLAYAFETKD--ALCLVLTL 266 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHH--hhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC--ceEEEEEe
Confidence 89999999999999875 78999999887766543 334455788999999999999999866666666 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|.+|+|.=+|.......++.....-+|.+|+-||.+||.. +||.||+||+|||||++|+++|+|.|||..+......
T Consensus 267 MNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~ 343 (591)
T KOG0986|consen 267 MNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI 343 (591)
T ss_pred ecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCCcc
Confidence 9999999999877777899999999999999999999999 9999999999999999999999999999988755443
Q ss_pred cc-------ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHH-HhcCCCCcccccCcccCCCCHH
Q 005734 548 SD-------DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAAD-YLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~~-------~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
.+ ..|+....+.++...|-||+||++|||+.|+.||....+..-.+-+.. .+.++. ++++.
T Consensus 344 ~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~-----------ey~~k 412 (591)
T KOG0986|consen 344 RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPE-----------EYSDK 412 (591)
T ss_pred ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchh-----------hcccc
Confidence 33 223333445678889999999999999999999964332222212222 222222 23334
Q ss_pred HHHHHHHHHHHccccCCCCCCCHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMN 643 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ 643 (680)
..++..++...-++.||++|..-+
T Consensus 413 FS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 413 FSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cCHHHHHHHHHHHccCHHHhccCC
Confidence 446788888899999999997544
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=255.15 Aligned_cols=229 Identities=14% Similarity=0.170 Sum_probs=178.9
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
...+|.|+|+.|-++.. .+++..+||++.... .+-.+|+.++.+. +|+||+++.+.+.++. +.++||
T Consensus 327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~--~~~~v~ 395 (612)
T KOG0603|consen 327 REELGEGSFSAVKYCESSPTDQEPAVKIISKRA---------DDNQDEIPISLLVRDHPNIVKSHDVYEDGK--EIYLVM 395 (612)
T ss_pred ccccCCCCccceeeeeccccccchhheeccccc---------cccccccchhhhhcCCCcceeecceecCCc--eeeeee
Confidence 35599999999999986 467889999886542 2244677777776 6999999999999887 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-cCCCCeEEcccccccccCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL-TDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-d~~~~~ki~DFGla~~~~~~ 544 (680)
|++.+|-+.+.+.... ..-..+..|+.+++.|+.|||.+ ++|||||||+|||+ ++.++++|+|||.++.....
T Consensus 396 e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999998888876443 22267778999999999999998 99999999999999 58899999999999887654
Q ss_pred C-----CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 545 S-----KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 545 ~-----~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
- +.....|+......+++++|+|||||+||||+||+.||...... .+ +...+..+. +...
T Consensus 470 ~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~e-i~~~i~~~~------------~s~~ 534 (612)
T KOG0603|consen 470 CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IE-IHTRIQMPK------------FSEC 534 (612)
T ss_pred hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HH-HHHhhcCCc------------cccc
Confidence 1 11223355555667899999999999999999999999754422 11 122222211 1123
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+..+|+.+|++.||.+||+|.++...
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 34688999999999999999999999764
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=268.13 Aligned_cols=240 Identities=13% Similarity=0.168 Sum_probs=149.0
Q ss_pred ccccCCCCCCeEEEEEeC-C----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeE------EecC
Q 005734 388 SNIIDTQSGCTIYKGTLS-S----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY------CEDD 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~------~~~~ 456 (680)
.+.||+|+||.||+|+.. + +..||||++..... .+.+..| .+.+..+.+++.++.. +..+
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-------~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-------VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-------hHHHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence 389999999999999985 4 68899998753221 1111111 1222223333332221 1223
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCC------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKEMD------------------HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLS 518 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~~~------------------~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlK 518 (680)
. +.++||||+++|+|.+++...... .........|+.|++.||+|||+. +|+|||||
T Consensus 208 ~--~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 208 D--EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred C--ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 3 679999999999999998643210 111234557999999999999998 99999999
Q ss_pred CCCeeecC-CCCeEEcccccccccCCCCCcc----cccccCCCCC---------------------------CCCCCCCe
Q 005734 519 SHCIYLTD-DYAAKVAEICFTTIALPKSKVS----DDIENSVLPP---------------------------LADPETNI 566 (680)
Q Consensus 519 p~NILld~-~~~~ki~DFGla~~~~~~~~~~----~~~~~~~~~~---------------------------~~s~~sDV 566 (680)
|+|||+++ ++.+||+|||+++......... ...+.|..|+ .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 5799999999998653211100 0011122211 23456799
Q ss_pred eehhHHHHHHHhCCCCCCccc----------cccHHHHHHHHhcCCCCcccccCcccC---CCCHHHHHHHHHHHHHccc
Q 005734 567 YSFGILMLEIISGKLPYCEEK----------ELSIEKWAADYLNEPRNFSCMIDPSLK---SFKQNELEAICEVIKECIK 633 (680)
Q Consensus 567 ySfGvvllElltG~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~d~~l~---~~~~~~~~~~~~l~~~C~~ 633 (680)
|||||++|||+++..+++... ..+...|....... ..+.+. +..........+|+.+|++
T Consensus 363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR-------ASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc-------cchhhhhhhhhccccchHHHHHHHHHcc
Confidence 999999999999877754321 01111221110000 000000 0000011245689999999
Q ss_pred cCCCCCCCHHHHHHH
Q 005734 634 TDLRQRPTMNDIIVQ 648 (680)
Q Consensus 634 ~~P~~RPtm~ev~~~ 648 (680)
.||++|||++|+++.
T Consensus 436 ~dP~kR~ta~e~L~H 450 (566)
T PLN03225 436 FKGRQRISAKAALAH 450 (566)
T ss_pred CCcccCCCHHHHhCC
Confidence 999999999999875
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=245.62 Aligned_cols=247 Identities=19% Similarity=0.315 Sum_probs=184.7
Q ss_pred HHHHhhhhc-cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC
Q 005734 380 LDTACEDFS-NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457 (680)
Q Consensus 380 l~~~~~~~~-~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 457 (680)
+.....-|. +++|.|-||+||-|+. ++|+.||||++.+.+.. .+++...+.|+.+|.+++||.||.|.-.|...+
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp---~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e 636 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFP---TKQESQLRNEVAILQNLHHPGIVNLECMFETPE 636 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCC---CchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc
Confidence 333334454 8999999999999997 58999999999765433 345577899999999999999999999999887
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeEEcc
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAE 534 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ki~D 534 (680)
..+.|||-+ +|+..+.+-......|+...-..+..||..||.|||.. +||||||||+||||.+. -.+||+|
T Consensus 637 --rvFVVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCD 710 (888)
T KOG4236|consen 637 --RVFVVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCD 710 (888)
T ss_pred --eEEEEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecc
Confidence 789999999 55655555444556788888888999999999999999 99999999999999643 4689999
Q ss_pred cccccccCCCCCccc--ccccCCC-----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 535 ICFTTIALPKSKVSD--DIENSVL-----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 535 FGla~~~~~~~~~~~--~~~~~~~-----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
||+|++..+.+.... ..|.|.+ ..-+...-|+||.|||+|--++|..||.++++ +-+.+ +.. .-
T Consensus 711 FGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQI----QNA---aF 781 (888)
T KOG4236|consen 711 FGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQI----QNA---AF 781 (888)
T ss_pred ccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hhHHh----hcc---cc
Confidence 999999875543221 1233333 34566778999999999999999999987643 32222 211 01
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+..+ ....+......+++...++..=.+|-+....+.
T Consensus 782 MyPp---~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 782 MYPP---NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred ccCC---CchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 1111 112333456778888888888888888776553
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=228.81 Aligned_cols=249 Identities=15% Similarity=0.224 Sum_probs=178.4
Q ss_pred cccCCCCCCeEEEEEeCC-----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLSS-----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
..||+|.||.||||+-.+ ...+|+|+++..... ........+|+.+++.++|||||.|..++...+. ..++
T Consensus 30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~---tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~-~v~l 105 (438)
T KOG0666|consen 30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG---TGISMSACREIALLRELKHPNVISLVKVFLSHDK-KVWL 105 (438)
T ss_pred ceecccccceeeEeeeccCCcccchhhHHHHHhccCCC---CCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc-eEEE
Confidence 679999999999997532 236888887644221 1223467899999999999999999998877432 6799
Q ss_pred EEEecCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC----CCeEEcccc
Q 005734 464 VFEYAPNGTVFEHLHIK---EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD----YAAKVAEIC 536 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~---~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~----~~~ki~DFG 536 (680)
++||.+. +|.+.++-. ....++-.....|..||..|+.|||+. -|+||||||.|||+..+ |.+||+|||
T Consensus 106 ~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 106 LFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred Eehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeeccc
Confidence 9999987 999998632 345788899999999999999999999 79999999999999776 899999999
Q ss_pred cccccCCCCCc----c-------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc---------ccHHHHH
Q 005734 537 FTTIALPKSKV----S-------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKE---------LSIEKWA 595 (680)
Q Consensus 537 la~~~~~~~~~----~-------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~---------~~~~~~~ 595 (680)
+++.+...-.. . ...|+... ..-+|++.|||+.|||..||+|-++-|.+.+. .+..+.+
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99987632111 0 11123222 34578999999999999999998877754221 1222333
Q ss_pred HHHhcCCCCcccccCcccCCCCH--------------H------------HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQ--------------N------------ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~--------------~------------~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
-..+..+.. ..-|.+..+++ . .....++|..+++..||-+|.|+++.++.
T Consensus 262 f~vLG~Pt~---~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 262 FEVLGTPTD---KDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHcCCCcc---ccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 333332211 00111111110 0 01247889999999999999999988764
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-27 Score=235.39 Aligned_cols=244 Identities=18% Similarity=0.277 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEE-eCCCCEEEEEEeeeccchhhHHH----HHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKS----QEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~-~~~g~~vaVK~~~~~~~~~~~~~----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+++|+|||..|||+. +.+.+.||||+-... ++|..+ ..+-..+|-++-+.+.||.||+++.|+.-+.. ..|-
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN--K~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd-sFCT 545 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN--KNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD-SFCT 545 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhc--cchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc-ccee
Confidence 789999999999998 467889999976543 334322 23456789999999999999999999975442 4589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeEEcccccccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTI 540 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~ki~DFGla~~ 540 (680)
|.|||++.+|+=+|... ..++..+...|+.+|..||.||... .|+|+|-||||.||||- ..|.+||.|||++++
T Consensus 546 VLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 546 VLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 99999999999888543 4688999999999999999999975 88999999999999995 357899999999999
Q ss_pred cCCCCCcccc---------------cccCC----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH-hc
Q 005734 541 ALPKSKVSDD---------------IENSV----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY-LN 600 (680)
Q Consensus 541 ~~~~~~~~~~---------------~~~~~----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~-~~ 600 (680)
+..++..... .|++. .|...+.|.||||.|||+|..+.|+.||..+. +.-+.+... +-
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq--sQQdILqeNTIl 700 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ--SQQDILQENTIL 700 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch--hHHHHHhhhchh
Confidence 9855433211 12221 25567889999999999999999999997542 111222111 00
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...+..-.. .+....+...++++|++..-++|....+++.
T Consensus 701 kAtEVqFP~-------KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 701 KATEVQFPP-------KPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred cceeccCCC-------CCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 001110000 1122357789999999999999988777664
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-28 Score=227.11 Aligned_cols=252 Identities=15% Similarity=0.247 Sum_probs=183.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC------Cce
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP------FNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~~ 461 (680)
.+||+|.||.||+|+.+ +|+.||+|++-....+. .......+|+++|..++|+|++.++..|..... ...
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe---GfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ 99 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATF 99 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc---CCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccccee
Confidence 68999999999999975 67778887664432221 123356799999999999999999999864321 136
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
|+|+++|+. +|..+|... ...++..++.+++.++..||.|+|.. .|+|||+|+.|+|++.++..||+|||+++..
T Consensus 100 ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 100 YLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred eeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 999999987 899888643 35789999999999999999999998 9999999999999999999999999999776
Q ss_pred CCCC-Ccccc-----------cccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC--CCcc
Q 005734 542 LPKS-KVSDD-----------IENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP--RNFS 606 (680)
Q Consensus 542 ~~~~-~~~~~-----------~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 606 (680)
.... ..... .++.. ....++++.|||.-|||+.||+||.+-+.+..++.....+......- +-..
T Consensus 175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP 254 (376)
T ss_pred ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence 4211 11111 11111 23467899999999999999999999888766555555554443221 1011
Q ss_pred cccC----ccc--CCCC-------HHHH------HHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 607 CMID----PSL--KSFK-------QNEL------EAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 607 ~~~d----~~l--~~~~-------~~~~------~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+.. ..+ ...+ ++.. .+.++++.+.+..||.+|+++.+++..
T Consensus 255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1000 001 0000 1112 377899999999999999999999864
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=226.37 Aligned_cols=233 Identities=15% Similarity=0.191 Sum_probs=178.3
Q ss_pred hhccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+|-.++|+|.||.|-.++-+ +|+.+|+|++++...-. ++...--..|-++|...+||.+..|.-.++..+ ..+.|
T Consensus 171 dfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia--kdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d--rlCFV 246 (516)
T KOG0690|consen 171 DFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA--KDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD--RLCFV 246 (516)
T ss_pred hHHHHhcCCccceEEEEeecccCceeehhhhhhhheee--hHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc--eEEEE
Confidence 44589999999999999875 78999999887544322 344555678899999999999998877777666 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||..+|.|.-+|... ..++...-.-+-..|..||.|||+. +||.||+|.+|.|||.||++||+|||+++.-...
T Consensus 247 MeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 9999999999888543 3567766667888999999999998 9999999999999999999999999999876543
Q ss_pred CCcc---cccccCCCCC-----CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKVS---DDIENSVLPP-----LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~~---~~~~~~~~~~-----~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.... ...|+|.+|+ .+....|-|..|||+|||++|+.||...+...+.+.+.. +.-. +
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~---ed~k-----------F 387 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM---EDLK-----------F 387 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh---hhcc-----------C
Confidence 3222 2235555544 456779999999999999999999976543334333211 1111 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPT 641 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPt 641 (680)
+.....+...|..-.+..||.+|..
T Consensus 388 Pr~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 388 PRTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred CccCCHHHHHHHHHHhhcChHhhcC
Confidence 1122256778888899999999973
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-27 Score=254.88 Aligned_cols=231 Identities=16% Similarity=0.250 Sum_probs=165.4
Q ss_pred cccCCCCCC-eEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGC-TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g-~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+++|.|+.| .||+|... |+.||||++.. +...-..+||+.|+.- +||||||++|.-.+.+ ..||..|
T Consensus 515 eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~--------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q--F~YIalE 583 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE-GREVAVKRLLE--------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ--FLYIALE 583 (903)
T ss_pred HHcccCCCCcEEEEEeeC-CceehHHHHhh--------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCc--eEEEEeh
Confidence 789999887 68999995 78999998753 2334567899999998 5999999977666655 8899999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---C--CCeEEccccccc
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---D--YAAKVAEICFTT 539 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~--~~~ki~DFGla~ 539 (680)
.|. .+|++++... ......-..-..+..|++.||++||+- +||||||||.|||++. + .+|+|+|||+++
T Consensus 584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 995 5999999753 111111133466788999999999997 9999999999999975 3 579999999999
Q ss_pred ccCCCCCc-ccc----------cccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 540 IALPKSKV-SDD----------IENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 540 ~~~~~~~~-~~~----------~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
.+..+... ... .||......-+...||||+|||+|+.+| |++||.+.-+.+ ...+.....+..
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-----~NIl~~~~~L~~ 734 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-----ANILTGNYTLVH 734 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-----hhhhcCccceee
Confidence 98743322 111 1222222233456899999999999999 599996432110 111111111111
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+... .++ +..+|+.++++++|..||++.+|+.
T Consensus 735 -----L~~~-~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 -----LEPL-PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -----eccC-chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1111 112 7889999999999999999999984
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=248.06 Aligned_cols=243 Identities=19% Similarity=0.298 Sum_probs=188.6
Q ss_pred hhhccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecC---CCC
Q 005734 385 EDFSNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDD---EPF 459 (680)
Q Consensus 385 ~~~~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~---~~~ 459 (680)
..|.+.||.|.+|.|||++. ++|+.+|||++.... +...+...|.++++.. .|||++.++|++... .+.
T Consensus 21 ~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~------d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 21 FEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE------DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred cEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc------cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 44569999999999999995 578899999886543 3345677888888887 699999999998632 233
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
+.+||||||.+||..|++..-.+..+.|.....|+.++++|+++||.. .++|||||-.|||++.++.+|+.|||++.
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeee
Confidence 789999999999999999876678899999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCCcccc--------cccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 540 IALPKSKVSDD--------IENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 540 ~~~~~~~~~~~--------~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
.++.......+ .|+.. ....++..+|+||+|++..||--|.+|+.+..+.- ..+.-++..
T Consensus 172 QldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr------aLF~IpRNP- 244 (953)
T KOG0587|consen 172 QLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR------ALFLIPRNP- 244 (953)
T ss_pred eeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh------hhccCCCCC-
Confidence 77532211111 12211 12245667999999999999999999997654311 111111110
Q ss_pred cccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.|.+. -+....+++.+++..|+.+|-..||++.++++
T Consensus 245 ---PPkLk-rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 245 ---PPKLK-RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ---Ccccc-chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 01111 23456689999999999999999999998875
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=257.44 Aligned_cols=247 Identities=17% Similarity=0.183 Sum_probs=188.8
Q ss_pred HHHhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecC
Q 005734 381 DTACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456 (680)
Q Consensus 381 ~~~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 456 (680)
....++|. .+||+|+||.|...+++ +++.+|.|++++.. +. ......|+.|-++|..-..+-||.|+-.+.+.
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~e---MlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWE---MLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHH---HhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 33345565 89999999999999985 67888999886421 11 12345699999999999999999998888888
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
+ +.|+|||||+||+|-.++..-. .++..-...++..|.-||.-||+. ++|||||||+|||||.+|++|++|||
T Consensus 148 ~--~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 148 R--YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred c--ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 7 7899999999999999996433 577776777888999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcc----cccccCCC----------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC
Q 005734 537 FTTIALPKSKVS----DDIENSVL----------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 537 la~~~~~~~~~~----~~~~~~~~----------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
-+-.+..++... ...|.|.. .+.+++++|-||+||++|||+.|.-||.. .++++...+.....
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa---dslveTY~KIm~hk 297 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA---DSLVETYGKIMNHK 297 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH---HHHHHHHHHHhchh
Confidence 887777544332 22344432 26789999999999999999999999976 34666666655553
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT---MNDIIVQ 648 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt---m~ev~~~ 648 (680)
..+.-.-+ .+..++..+||.+-+. +|+.|.. .+|+-..
T Consensus 298 ~~l~FP~~-------~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 298 ESLSFPDE-------TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hhcCCCcc-------cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 32221100 1134677888877665 6777877 7777654
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=218.12 Aligned_cols=203 Identities=21% Similarity=0.395 Sum_probs=168.8
Q ss_pred cCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecC
Q 005734 391 IDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP 469 (680)
Q Consensus 391 iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~ 469 (680)
||+|++|.||++...+ |+.++||+........ ....+.+|++.+++++|++++++++++.... ..++++||++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS----LLEELLREIEILKKLNHPNIVKLYGVFEDEN--HLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh----HHHHHHHHHHHHHhcCCCCeeeEeeeeecCC--eEEEEEecCC
Confidence 6899999999999864 8899999887554221 3467999999999999999999999998876 6799999999
Q ss_pred CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcccccccccCCCC---
Q 005734 470 NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIALPKS--- 545 (680)
Q Consensus 470 ~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla~~~~~~~--- 545 (680)
+++|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. +..++|+|||.+.......
T Consensus 75 ~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~ 150 (215)
T cd00180 75 GGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLL 150 (215)
T ss_pred CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchh
Confidence 999999986442 4689999999999999999999998 9999999999999999 8999999999998765332
Q ss_pred Ccc-----cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 546 KVS-----DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 546 ~~~-----~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
... ...++..... ..+.++|+|++|++++|+
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 111 1112222222 567889999999999999
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.++.+++..|++.+|++||++.++++.
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 357789999999999999999999864
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-26 Score=229.24 Aligned_cols=247 Identities=13% Similarity=0.174 Sum_probs=184.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC--CC----cccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN--HK----NFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--H~----niv~l~g~~~~~~~~~~ 461 (680)
.++|+|.||.|-++... .+..||||+++.- ....+..+-|+++|.++. -| -+|.+.+|+.-.+ +.
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V------~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg--hi 166 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNV------DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG--HI 166 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHH------HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC--ce
Confidence 68999999999999864 4788999988532 234566788999999993 22 2677888887777 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---------------
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD--------------- 526 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--------------- 526 (680)
+||+|.+ +-|+.++|..++..+++..+...|+.|++++++|||+. .++|-||||+|||+.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999 66999999888778899999999999999999999999 9999999999999942
Q ss_pred -----CCCeEEcccccccccCCCCCc-----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHH
Q 005734 527 -----DYAAKVAEICFTTIALPKSKV-----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596 (680)
Q Consensus 527 -----~~~~ki~DFGla~~~~~~~~~-----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~ 596 (680)
+..+||.|||.|+......+. ....||...+-.++.++||||+||||.|+.||..-|...++.+-....+
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMe 322 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMME 322 (415)
T ss_pred eccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHH
Confidence 235799999999987644322 2234555555677999999999999999999998886543222122222
Q ss_pred HHhcCC----------------CCcc-----------cccCccc-----CCCCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 005734 597 DYLNEP----------------RNFS-----------CMIDPSL-----KSFKQNELEAICEVIKECIKTDLRQRPTMND 644 (680)
Q Consensus 597 ~~~~~~----------------~~~~-----------~~~d~~l-----~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~e 644 (680)
..+... +.++ .+.++.. ......+..++++|+..++..||.+|+|+.|
T Consensus 323 rIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~E 402 (415)
T KOG0671|consen 323 RILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLRE 402 (415)
T ss_pred HhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHH
Confidence 222210 0000 0001000 0123445678999999999999999999999
Q ss_pred HHH
Q 005734 645 IIV 647 (680)
Q Consensus 645 v~~ 647 (680)
+++
T Consensus 403 AL~ 405 (415)
T KOG0671|consen 403 ALS 405 (415)
T ss_pred Hhc
Confidence 986
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-26 Score=207.83 Aligned_cols=189 Identities=15% Similarity=0.182 Sum_probs=150.6
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
..||+|++|.|-+-++ .+|...|||++..... .+.++....|+++..+. ..|.+|.++|...+.. ..++.||
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn----~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg--dvwIcME 125 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN----SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG--DVWICME 125 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcC----hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc--cEEEeHH
Confidence 5799999999988886 5899999999876543 23345677888887665 7999999999887666 6799999
Q ss_pred ecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
.|.- ||+.+-.. ..+..++..-.-+||..|..||.|||++. .++|||+||+|||++.+|.+||+|||++-.+...
T Consensus 126 ~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 9954 88776542 24567899999999999999999999875 8999999999999999999999999999877543
Q ss_pred CCcc-------cccccCCC----CCCCCCCCCeeehhHHHHHHHhCCCCCCcc
Q 005734 545 SKVS-------DDIENSVL----PPLADPETNIYSFGILMLEIISGKLPYCEE 586 (680)
Q Consensus 545 ~~~~-------~~~~~~~~----~~~~s~~sDVySfGvvllElltG~~p~~~~ 586 (680)
...+ ...|+... ...++-|+||||+|+.+.||.+++.||+.-
T Consensus 203 iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 203 IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 2211 11222211 225677899999999999999999999753
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-25 Score=209.81 Aligned_cols=242 Identities=14% Similarity=0.265 Sum_probs=179.3
Q ss_pred cccCCCCCCeEEEEE-eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~-~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+|+|-++.|+.|. ..+.+.++||+++.. ..+...+|+++|..++ ||||++|+....++.+.-..||+|
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPV--------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechH--------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 789999999999998 467788999988643 2456889999999997 999999999998877555689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~~~~~~~ 545 (680)
|+.|-+...+. +.++-.+...+..++.+||.|+|+. +|.|||+||.|+++|.. -..+++|+|+|.++.+..
T Consensus 116 ~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 116 YVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred hhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence 99987766554 2567777888999999999999999 99999999999999965 468999999999987655
Q ss_pred Cccccc-------ccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccc-c-ccHHHHHHHHhcCC------CCccccc
Q 005734 546 KVSDDI-------ENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEK-E-LSIEKWAADYLNEP------RNFSCMI 609 (680)
Q Consensus 546 ~~~~~~-------~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~-~-~~~~~~~~~~~~~~------~~~~~~~ 609 (680)
...... |+.. ....++-.-|+|||||++.+|+-.+.||.... . ..+++.+ +.+... ......+
T Consensus 188 eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIa-kVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIA-KVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHH-HHhChHHHHHHHHHHccCC
Confidence 443322 1111 12345677899999999999999999986432 1 2233322 111110 0011113
Q ss_pred CcccCC------------C----CH-HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKS------------F----KQ-NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~------------~----~~-~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
||.+.. + .+ -...++.+++.+.+..|-++|||++|.+.
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 332211 0 00 11368889999999999999999999875
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-26 Score=226.43 Aligned_cols=238 Identities=13% Similarity=0.153 Sum_probs=177.9
Q ss_pred HHHhhhhccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC
Q 005734 381 DTACEDFSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 381 ~~~~~~~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 458 (680)
.....+|-.+||+|+||.|..|.-+ +.+.+|||+++....-+ .+..+--+.|-++|.-- +-|.+|.++.+++.-+
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ--dDDvectm~EKrvLAL~~kppFL~qlHScFQTmD- 423 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ--DDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD- 423 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeee--cCcccceehhhhheecCCCCchHHHHHHHhhhhh-
Confidence 3344567799999999999999875 44678999887654322 11223345566677665 5788999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
..|.||||+.+|+|--++.. -..+..+...-+|.+||-||-|||+. +|+.||||..||+||.+|++||+|||++
T Consensus 424 -RLyFVMEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmc 497 (683)
T KOG0696|consen 424 -RLYFVMEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 497 (683)
T ss_pred -heeeEEEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccc
Confidence 67999999999999877743 23566777888999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcc---cccccCCCCC-----CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 539 TIALPKSKVS---DDIENSVLPP-----LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 539 ~~~~~~~~~~---~~~~~~~~~~-----~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
+.-.-..... -..|.|.+|+ .++...|.|||||+||||+.|+.||+++++.++..-+.+ ...
T Consensus 498 KEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e---hnv------- 567 (683)
T KOG0696|consen 498 KENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME---HNV------- 567 (683)
T ss_pred cccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH---ccC-------
Confidence 8754222221 1234454443 567779999999999999999999998765554433322 111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPT 641 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt 641 (680)
.++.....+...+...-+...|.+|..
T Consensus 568 ----syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 568 ----SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ----cCcccccHHHHHHHHHHhhcCCccccC
Confidence 122333367778888889999999864
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-26 Score=232.26 Aligned_cols=232 Identities=13% Similarity=0.167 Sum_probs=183.3
Q ss_pred cccCCCCCCeEEEEEeCCCC-EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGV-EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~-~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..+|-|+||.|=........ .+|.|+++++...+ .++++-...|-.+|...+.+.||+|+-.+.+.. +.|+.||-
T Consensus 426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVd--tkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k--yvYmLmEa 501 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVD--TKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK--YVYMLMEA 501 (732)
T ss_pred hhcccCccceEEEEEecccchHHHHHHHhHhhccc--hhHHHHHHhHHHHHHhcCchHHHHHHHHhccch--hhhhhHHh
Confidence 57899999999988875433 37888776654333 345566788999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
|-+|.|...|+++. .++-..-.-++..+.+|++|||+. +||.|||||+|.+||.+|-+|+.|||+|+......
T Consensus 502 ClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT 576 (732)
T KOG0614|consen 502 CLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT 576 (732)
T ss_pred hcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccCCce
Confidence 99999999997654 577777788999999999999999 99999999999999999999999999999986432
Q ss_pred CcccccccCCCCCCC-----CCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 546 KVSDDIENSVLPPLA-----DPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 546 ~~~~~~~~~~~~~~~-----s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.+....|+|.+|+.. +...|.||+||+++||+||++||.+.++......+.+.+..- +++...
T Consensus 577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i------------~~Pr~I 644 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI------------EFPRRI 644 (732)
T ss_pred eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh------------hccccc
Confidence 223344666666554 445899999999999999999998866554444444332221 122233
Q ss_pred HHHHHHHHHHccccCCCCCCC
Q 005734 621 LEAICEVIKECIKTDLRQRPT 641 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPt 641 (680)
.....+++++.+..+|.+|..
T Consensus 645 ~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 645 TKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred chhHHHHHHHHHhcCcHhhhc
Confidence 356788999999999999986
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.4e-24 Score=210.34 Aligned_cols=189 Identities=21% Similarity=0.297 Sum_probs=156.3
Q ss_pred hccccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||.|++|+||++...+ ++.+++|........ ...+.+.+|++.+.+++|+|++++++++.... ..++++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~--~~~~v~ 76 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE----KQREEFLREIRILKKLKHPNIVKLYGVFEDPE--PLYLVM 76 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch----HHHHHHHHHHHHHHhCCCCChhhheeeeecCC--ceEEEE
Confidence 34789999999999999875 889999998755422 24568899999999999999999999998776 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++++|.+++..... .+++.....++.+++++++|||.. +++|+|++|+||+++.++.++|+|||.+.......
T Consensus 77 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~ 152 (225)
T smart00221 77 EYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL 152 (225)
T ss_pred eccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc
Confidence 99999999999865432 289999999999999999999998 99999999999999999999999999988775432
Q ss_pred ----Ccc-----cccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCc
Q 005734 546 ----KVS-----DDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCE 585 (680)
Q Consensus 546 ----~~~-----~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~ 585 (680)
... ...++.. .....+.++|||+||++++||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 100 1112222 233456789999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-25 Score=211.52 Aligned_cols=253 Identities=11% Similarity=0.188 Sum_probs=183.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC---ceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF---NRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~l 463 (680)
++-||-|+||.||..+.+ +|+.||.|++.... +. -...+.+.+|+++|.-++|.|++..+......... +.|.
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~--L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QN--LASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHH-HH--HHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 478999999999999874 89999998875332 11 23356788999999999999999998877654322 5688
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
++|.| ..+|..++- ..+.++-....-+.+||.+||.|||+. +|.||||||.|.|++.+...||+|||+++....
T Consensus 135 ~TELm-QSDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHH-Hhhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 99999 458887774 345688888888999999999999999 999999999999999999999999999998764
Q ss_pred CCCccc---------ccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC---------
Q 005734 544 KSKVSD---------DIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------- 604 (680)
Q Consensus 544 ~~~~~~---------~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------- 604 (680)
+..... ..|+.. ....++...||||.||+..||+-++.-|....+....+.+.+.+..+..
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 432211 112222 2346788999999999999999988888655544444554444433210
Q ss_pred -ccccc-----CcccC---C--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 605 -FSCMI-----DPSLK---S--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 605 -~~~~~-----d~~l~---~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
-..++ .|++. . .....-.+...+..+.+..||+.|.+..+.+..+
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 00011 11111 0 1112234566778888999999999988887654
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.2e-25 Score=209.11 Aligned_cols=249 Identities=16% Similarity=0.336 Sum_probs=183.2
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
++..+|.+.-.|..|+|++. |..+++|++.+. +++....++|..|.-.|+-+.||||.+++|.|..+. +..++.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr---~~t~risrdfneefp~lrifshpnilpvlgacnspp--nlv~is 266 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVR---EVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP--NLVIIS 266 (448)
T ss_pred hhhhhhccCCCccccccccc-Ccchhhhhhhhh---hcchhhcchhhhhCcceeeecCCchhhhhhhccCCC--CceEee
Confidence 44467788889999999997 455667777653 345566789999999999999999999999999876 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEc--ccccccccCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA--EICFTTIALP 543 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~--DFGla~~~~~ 543 (680)
.|||.|+|+..||+..+-.++-.+..++|.+||+|++|||+. .|-|..--|.+..|++|++.+++|+ |--++.....
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~g 345 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVG 345 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeeccc
Confidence 999999999999988877889999999999999999999986 4555556789999999999999885 3211111111
Q ss_pred CCC-cccccccCCC--CCC-CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 544 KSK-VSDDIENSVL--PPL-ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 544 ~~~-~~~~~~~~~~--~~~-~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
..+ .....|+... ++. .-..+|+|||.|++|||.|+..||.+-.+.+.--.+. - +.+.. ..+++
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia---l--eglrv-------~ippg 413 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA---L--EGLRV-------HIPPG 413 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh---h--ccccc-------cCCCC
Confidence 000 0111122211 111 1234899999999999999999997654433211111 0 11111 12334
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
....+.+++.-|+..||.+||.+..|+-.|+++.
T Consensus 414 is~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 414 ISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 4468999999999999999999999999998864
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.5e-24 Score=203.70 Aligned_cols=240 Identities=15% Similarity=0.253 Sum_probs=167.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEe-cCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCE-DDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~-~~~~~~~~lV 464 (680)
...+|+|.||.+..+.++ ..+.+++|.+.... ...++|.+|..---.+ .|.||+.-+.... ..+ ....+
T Consensus 29 ~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~------tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d--~YvF~ 100 (378)
T KOG1345|consen 29 NKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ------TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD--AYVFV 100 (378)
T ss_pred HHHhcccceeeEEeeeccCCceEEEeeccCcch------hhHHHHHHHhccceeeccchhhhHHHHHHhhcCc--eEEEe
Confidence 478999999999999986 56778888875432 3357888887765555 5999998776543 344 45789
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-c-CCCCeEEcccccccccC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL-T-DDYAAKVAEICFTTIAL 542 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-d-~~~~~ki~DFGla~~~~ 542 (680)
+||+|.|+|.+.+.. ..+-...-.+++.|++.||.|||++ .+||||||.+|||+ + +..++|++|||+++...
T Consensus 101 qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999999998854 3577888899999999999999999 99999999999999 3 44589999999998765
Q ss_pred CCCCcccccccCCC----------CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc--ccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKVSDDIENSVL----------PPLADPETNIYSFGILMLEIISGKLPYCEEKE--LSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~~~~~~~~~~----------~~~~s~~sDVySfGvvllElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d 610 (680)
.........-.+.. .-...+.+|||.|||+++.++||+.||....- ....+|..-..+... .+.
T Consensus 175 ~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~----~~P 250 (378)
T KOG1345|consen 175 TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP----ALP 250 (378)
T ss_pred ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc----cCc
Confidence 32111111111111 11346779999999999999999999974321 222333222111111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L 649 (680)
..+..+ .+.+.++.++-+.++|++|-...++.++-
T Consensus 251 ~~F~~f----s~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 251 KKFNPF----SEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred hhhccc----CHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 112222 25677788888999999995555555443
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-23 Score=206.63 Aligned_cols=245 Identities=15% Similarity=0.250 Sum_probs=172.2
Q ss_pred ccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEEE
Q 005734 390 IIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMMV 464 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~lV 464 (680)
.+|.|.- .|.-+.. -.++.||+|++.... .. ....++..+|...+..+.|+||++++.++.-... .+.|+|
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n--~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v 99 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QN--QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV 99 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCcc-cc--CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence 4555555 3444432 257889999886552 22 2234567899999999999999999999874431 146999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||| .++|.+.++ ..++-.+...|..|++.|+.|||+. +|+||||||+||++..+...||.|||+|+.....
T Consensus 100 ~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 100 MELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred HHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCcc
Confidence 9999 559998886 2467788889999999999999999 9999999999999999999999999999876544
Q ss_pred CCccc-------ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH--HHHhcCCC------------
Q 005734 545 SKVSD-------DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA--ADYLNEPR------------ 603 (680)
Q Consensus 545 ~~~~~-------~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~--~~~~~~~~------------ 603 (680)
-..+. ..|+...+..+.+..||||.||++.||++|+.-|.+.. .+.+|. .+.+..+.
T Consensus 172 ~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d--~idQ~~ki~~~lgtpd~~F~~qL~~~~r 249 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD--HIDQWNKIIEQLGTPDPSFMKQLQPTVR 249 (369)
T ss_pred cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch--HHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence 11111 12333334457889999999999999999998876533 222222 12222110
Q ss_pred ------------CcccccCc-ccC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 604 ------------NFSCMIDP-SLK---SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 604 ------------~~~~~~d~-~l~---~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+.+.+.. .+. +.+.-......+++.+++..+|++|.+.+++++.
T Consensus 250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00000000 000 0111223467899999999999999999999875
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-22 Score=205.85 Aligned_cols=128 Identities=16% Similarity=0.196 Sum_probs=108.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-----CC---cccceeeEEecCCC-
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-----HK---NFVNLIGYCEDDEP- 458 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----H~---niv~l~g~~~~~~~- 458 (680)
++||-|-|.+||.+.. .+.+.||+|+++-. +...+..+.||++|++++ |+ +||+|+.+|...++
T Consensus 84 rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA------qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 84 RKLGWGHFSTVWLAWDTQNKRYVALKVVKSA------QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred EeccccccceeEEEeeccCCeEEEEEEEehh------hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 7899999999999985 46678999988532 233456789999999984 33 69999999975443
Q ss_pred -CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 005734 459 -FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 459 -~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 525 (680)
.+.++|+|++ +-+|..++....-+.++.....+|+.||..||.|||.+| +|||-||||+|||+.
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 3789999999 779999998777778999999999999999999999999 999999999999994
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-22 Score=242.51 Aligned_cols=242 Identities=26% Similarity=0.418 Sum_probs=181.1
Q ss_pred cccCCchHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCCccceeeeC-CCcEeEEEcCCCCCcccCCcccCCCCCCCEEE
Q 005734 23 QGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCL-NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLV 101 (680)
Q Consensus 23 ~~~~~~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c~w~gv~c~-~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~ 101 (680)
..|.....|+.+|++||+.+. +|...+.+|+. ..+||.|.||+|. .++|+.|+|++|+++|.+++.+..+++|+.|+
T Consensus 22 ~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~w~~-~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~ 99 (968)
T PLN00113 22 NFSMLHAEELELLLSFKSSIN-DPLKYLSNWNS-SADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTIN 99 (968)
T ss_pred HccCCCHHHHHHHHHHHHhCC-CCcccCCCCCC-CCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEE
Confidence 333445688999999999984 77777899974 4579999999997 57999999999999999999999999999999
Q ss_pred ccCccCcccCCcccC-CCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 102 LQKNHFSGVIPKELG-ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 102 L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
|++|+++|.+|..+. .+++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..++++++|++|++++|.+.
T Consensus 100 Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~ 177 (968)
T PLN00113 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLV 177 (968)
T ss_pred CCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccc
Confidence 999999999998765 899999999999999998886 56889999999999999999999999999999999999998
Q ss_pred cccCCccccccc-----------cCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhhHHhhhhhhcccccCCC
Q 005734 181 AEVAGIRSVNRK-----------FGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAE 249 (680)
Q Consensus 181 g~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~ 249 (680)
+.+|........ .+..+..+..+.+++.++++.|++++.+|..+. .+.++. .+.++.|++.+.
T Consensus 178 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~----~l~~L~--~L~L~~n~l~~~ 251 (968)
T PLN00113 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG----GLTSLN--HLDLVYNNLTGP 251 (968)
T ss_pred ccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh----cCCCCC--EEECcCceeccc
Confidence 888863221111 111223455566666777777777776666554 222222 233455655443
Q ss_pred CCC-CC-CCCccccccCCCCCCCCCCC
Q 005734 250 PAT-VG-SSSDQVIALPTSRSSGTFPA 274 (680)
Q Consensus 250 ~~~-~~-~~~~~~~~~~~~~~~g~~p~ 274 (680)
.+. .. ...++...+..+..+|.+|.
T Consensus 252 ~p~~l~~l~~L~~L~L~~n~l~~~~p~ 278 (968)
T PLN00113 252 IPSSLGNLKNLQYLFLYQNKLSGPIPP 278 (968)
T ss_pred cChhHhCCCCCCEEECcCCeeeccCch
Confidence 221 11 12245556666666666653
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-22 Score=240.10 Aligned_cols=189 Identities=13% Similarity=0.157 Sum_probs=130.3
Q ss_pred cCCC-CcccceeeEEecCC-----CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 005734 440 RINH-KNFVNLIGYCEDDE-----PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513 (680)
Q Consensus 440 ~l~H-~niv~l~g~~~~~~-----~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~iv 513 (680)
+++| +||++++++|..+. ....+.++||+ .++|.++|+.. ...+++.+++.|+.||++||+|||+. +|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 4456 68888888873221 01346778888 66999999643 34699999999999999999999998 999
Q ss_pred ecCCCCCCeeecC-------------------CCCeEEcccccccccCCCC------------------------Ccccc
Q 005734 514 HSNLSSHCIYLTD-------------------DYAAKVAEICFTTIALPKS------------------------KVSDD 550 (680)
Q Consensus 514 HrDlKp~NILld~-------------------~~~~ki~DFGla~~~~~~~------------------------~~~~~ 550 (680)
||||||+||||+. ++.+|++|||+++...... +....
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999953 5567788888876432100 00012
Q ss_pred cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHH
Q 005734 551 IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKE 630 (680)
Q Consensus 551 ~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~ 630 (680)
.||......++.++|||||||+||||++|..|+.... ........... ++.. .....+...++.+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-~~~~~~~~~~~----------~~~~----~~~~~~~~~~~~~ 247 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-RTMSSLRHRVL----------PPQI----LLNWPKEASFCLW 247 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-HHHHHHHHhhc----------Chhh----hhcCHHHHHHHHH
Confidence 2444444457899999999999999999998875321 11111111110 1110 0112345688899
Q ss_pred ccccCCCCCCCHHHHHHH
Q 005734 631 CIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 631 C~~~~P~~RPtm~ev~~~ 648 (680)
||+.+|.+||+|.||++.
T Consensus 248 ~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQS 265 (793)
T ss_pred hCCCChhhCcChHHHhhc
Confidence 999999999999999864
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-23 Score=216.82 Aligned_cols=238 Identities=17% Similarity=0.199 Sum_probs=180.4
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..+|.|.||.|||++. ..++..|||+++.....+ ..-..+|+-+++..+|+|||.++|-+...+ ..++.|||
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd-----~~~iqqei~~~~dc~h~nivay~gsylr~d--klwicMEy 93 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-----FSGIQQEIGMLRDCRHPNIVAYFGSYLRRD--KLWICMEY 93 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCcc-----ccccccceeeeecCCCcChHHHHhhhhhhc--CcEEEEEe
Confidence 7899999999999996 478999999998765433 334568899999999999999999998777 56999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
|-+|+|++.-+.. ..++..+...++....+||+|||+. +=+|||||-.|||+++.+.+|++|||.+-.+.....
T Consensus 94 cgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~K 168 (829)
T KOG0576|consen 94 CGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK 168 (829)
T ss_pred cCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhhh
Confidence 9999999988643 4788889999999999999999998 889999999999999999999999998866542111
Q ss_pred ---cc----cccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 ---VS----DDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ---~~----~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...++.. ..+-+..++|||+.|+...|+---+.|..+..+........+-. ++|--.+.
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~---------~qpp~lkD 239 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSG---------FQPPTLKD 239 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccC---------CCCCcccC
Confidence 11 1112221 13456788999999999999998888865433222211111111 11111112
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+-++++.|+..+|++||+++..++
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 2233467889999999999999999987664
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-22 Score=209.05 Aligned_cols=190 Identities=16% Similarity=0.209 Sum_probs=145.5
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||-|+||.|..+.- ++...+|.|.+.+++.- .+.+..-.+.|-++|...+.+-||+|+-.+.+.+ ..|.||||
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl--~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd--nLYFVMdY 710 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVL--MRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD--NLYFVMDY 710 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHH--hhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC--ceEEEEec
Confidence 7899999999998874 45566788877654321 2344556788999999999999999999999888 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC--CCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL--PKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~--~~~ 545 (680)
+++|++-.+|-... -+.......++.+++-|+++.|.. ++|||||||+|||||.||++|+.||||++-.. .+.
T Consensus 711 IPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 711 IPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred cCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecccc
Confidence 99999999885332 455555555667899999999999 99999999999999999999999999986543 100
Q ss_pred -Ccc-cc-----------------------------------------cccCCCC-----CCCCCCCCeeehhHHHHHHH
Q 005734 546 -KVS-DD-----------------------------------------IENSVLP-----PLADPETNIYSFGILMLEII 577 (680)
Q Consensus 546 -~~~-~~-----------------------------------------~~~~~~~-----~~~s~~sDVySfGvvllEll 577 (680)
++. +. .+.|.++ .-++.-+|.||.||||+||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 000 00 0111111 22355599999999999999
Q ss_pred hCCCCCCccc
Q 005734 578 SGKLPYCEEK 587 (680)
Q Consensus 578 tG~~p~~~~~ 587 (680)
.|+.||..+.
T Consensus 866 ~g~~pf~~~t 875 (1034)
T KOG0608|consen 866 VGQPPFLADT 875 (1034)
T ss_pred hCCCCccCCC
Confidence 9999997543
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-22 Score=195.33 Aligned_cols=234 Identities=15% Similarity=0.226 Sum_probs=171.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+||+|+|.+|..+++. +.+.+|+|++++....+ .+...-...|-.+.... +||.+|.|..++.... ..+.|.|
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd--dedidwvqtek~vfe~asn~pflvglhscfqtes--rlffvie 331 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES--RLFFVIE 331 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHhcCC--cccchhHHhhHHHHHhccCCCeEEehhhhhcccc--eEEEEEE
Confidence 89999999999999975 66788999886543221 12233455566666555 6999999999998776 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|-=++. ....++.....-+..+|+-||.|||+. +|+.||||..|||+|..+.+|+.|||+++.-.....
T Consensus 332 yv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 332 YVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred EecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence 999999976664 334688888888899999999999999 999999999999999999999999999987654333
Q ss_pred ccc---ccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCc----cccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 VSD---DIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCE----EKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~~~---~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
... ..|.|.+| ..+....|.|++||+++||+.|+.||+- ..+.+..+++-..+-+. .+. +
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek-qir--i----- 478 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK-QIR--I----- 478 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh-ccc--c-----
Confidence 222 23444443 4566779999999999999999999972 22334444443333221 110 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCC
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPT 641 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPt 641 (680)
+.....+...+.+.-+++||.+|..
T Consensus 479 --prslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 479 --PRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred --cceeehhhHHHHHHhhcCCcHHhcC
Confidence 1111145566778888999988853
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.2e-22 Score=210.40 Aligned_cols=233 Identities=20% Similarity=0.296 Sum_probs=172.2
Q ss_pred HHcCCCCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe-eecC
Q 005734 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV-AHSN 516 (680)
Q Consensus 438 l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~i-vHrD 516 (680)
|+.+.|.|+.+++|.|.++. ..+.|.+||..|+|.+.+.. ....++|.-+..+..+|+.||+|||+. +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~--~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP--EMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCC--ceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 35678999999999999986 67999999999999999975 345799999999999999999999987 45 9999
Q ss_pred CCCCCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCC----C---CCCCCCCCeeehhHHHHHHHhC
Q 005734 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVL----P---PLADPETNIYSFGILMLEIISG 579 (680)
Q Consensus 517 lKp~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~----~---~~~s~~sDVySfGvvllElltG 579 (680)
++++|+++|..+.+|++|||+........... ...|+... . ...+.++||||||++++|+++.
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 99999999999999999999988774210000 11122211 1 1257889999999999999999
Q ss_pred CCCCCcccc-ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC--
Q 005734 580 KLPYCEEKE-LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS-- 656 (680)
Q Consensus 580 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~-- 656 (680)
+.||+.... .+..+.+...... ....+.|.+.... +...++..++.+||..+|.+||++++|-..++.+....
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~~~---~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~ 230 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVKKG---GSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSS 230 (484)
T ss_pred cCccccccccCChHHHHHHHHhc---CCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccc
Confidence 999975321 2212222221111 1122333333222 33447899999999999999999999999999887643
Q ss_pred ---CCCCCCCCChhHHHHHHhhhccCC
Q 005734 657 ---PEQAVPRLSPLWWAELEILSAETT 680 (680)
Q Consensus 657 ---~~~~~~~~~~~~~~~~~~~~~~~~ 680 (680)
-...+.+..+.|-..||...+|||
T Consensus 231 ~~nl~D~m~~~le~Y~~nLe~~v~eRt 257 (484)
T KOG1023|consen 231 KGNLMDSLFRMLESYADNLEKLVDERT 257 (484)
T ss_pred cchhHHHHHHHHHHHHhhhHHHHHHHH
Confidence 223455667777777888877764
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=202.56 Aligned_cols=247 Identities=14% Similarity=0.150 Sum_probs=183.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC------CCcccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN------HKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~------H~niv~l~g~~~~~~~~~~ 461 (680)
...|+|-|++|.+|... .|..||||++.... .+.+.=++|+++|+++. -.|+++|+-.|...+ +.
T Consensus 438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE------~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn--HL 509 (752)
T KOG0670|consen 438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNE------VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN--HL 509 (752)
T ss_pred eccccceeeeeeeccccCCCCeeEEEEeecch------HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc--ee
Confidence 56799999999999864 57899999997542 34556779999999993 458999998888887 78
Q ss_pred EEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTT 539 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~-~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~ 539 (680)
|||+|-+. -+|.+.|..- ....|.......++.|+--||..|... +|+|+||||.|||+++. ...||||||.|.
T Consensus 510 ClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 510 CLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred EEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCcccc
Confidence 99999884 5999998632 234688888999999999999999986 99999999999999865 568999999998
Q ss_pred ccCCCCCcc------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH--------hcCCCCc
Q 005734 540 IALPKSKVS------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY--------LNEPRNF 605 (680)
Q Consensus 540 ~~~~~~~~~------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~ 605 (680)
.......+. ...|+-..+..++...|+||.||.||||.||+..|.+....+...+.... ++...-.
T Consensus 586 ~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~ 665 (752)
T KOG0670|consen 586 FASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFK 665 (752)
T ss_pred ccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchh
Confidence 876544332 22345555667888999999999999999999988765433333332221 1111001
Q ss_pred ccccCcc--------------------------------------cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 606 SCMIDPS--------------------------------------LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 606 ~~~~d~~--------------------------------------l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..-+|.. +.........++.+|...|+..||++|.|..+.++
T Consensus 666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 1111111 11112234568899999999999999999998875
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-21 Score=184.11 Aligned_cols=164 Identities=20% Similarity=0.239 Sum_probs=118.1
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC---c
Q 005734 471 GTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK---V 547 (680)
Q Consensus 471 GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~---~ 547 (680)
|+|.++++.+ +..++|.++..|+.|+++||+|||+. + ||+|||+++++.+|+ ||+++....... .
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~ 68 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDP 68 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccCCCcc
Confidence 7899999743 34699999999999999999999997 3 999999999999999 999987653322 1
Q ss_pred ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc-cHHHHHHHHhcCCCCcccccCcccCCCCHHHHH--HH
Q 005734 548 SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL-SIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE--AI 624 (680)
Q Consensus 548 ~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~--~~ 624 (680)
....|+......+++++|||||||++|||+||+.||...... .....+....... ++.-......... ++
T Consensus 69 ~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 141 (176)
T smart00750 69 YFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD-------DPRDRSNLESVSAARSF 141 (176)
T ss_pred cccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC-------CccccccHHHHHhhhhH
Confidence 122344444556788999999999999999999999654321 1111111111110 0000011112222 68
Q ss_pred HHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 625 CEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 625 ~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.+++.+||+.+|++||++.|+++.+..+.
T Consensus 142 ~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 142 ADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 99999999999999999999999887664
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=197.83 Aligned_cols=139 Identities=11% Similarity=0.087 Sum_probs=108.6
Q ss_pred ccccCCCCCCeEEEEEeC--CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||+|... +++.+|||++...............|.+|+++|.+++|+|+|+.+..+ + ..++||
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~--~~~LVm 97 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G--KDGLVR 97 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C--CcEEEE
Confidence 489999999999999874 577889988653211001123456799999999999999999643222 2 459999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC-CCCCeeecCCCCeEEcccccccccCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL-SSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDl-Kp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||+++++|... . .. . ...++.++++||+|||+. +|+|||| ||+|||++.++.+||+|||+|+....
T Consensus 98 E~~~G~~L~~~-~-~~-~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 98 GWTEGVPLHLA-R-PH-G------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred EccCCCCHHHh-C-cc-c------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 99999999732 1 11 1 146788999999999998 9999999 99999999999999999999997653
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-21 Score=202.36 Aligned_cols=189 Identities=14% Similarity=0.242 Sum_probs=148.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchh--hHH-HHHHHHHHHHHHHHcCC---CCcccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKD--WLK-SQEMAYRKQVDTLSRIN---HKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~--~~~-~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~ 461 (680)
..+|.|+||.|+.+..+ +...|+||.+.+.+.-. |.. ......--|+++|..++ |+||++++.++.+++ +.
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd--~y 644 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD--YY 644 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC--ee
Confidence 78999999999999986 45778888876543211 110 01112557999999997 999999999999988 67
Q ss_pred EEEEEec-CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 462 MMVFEYA-PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 462 ~lV~ey~-~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
||++|-. ++-+|++++..+ ..++.....-|..||+.|+++||+. +|||||||-+||.+|.+|-+|++|||.|..
T Consensus 645 yl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 645 YLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred EEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchhh
Confidence 9999965 566899999644 4689999999999999999999999 999999999999999999999999998865
Q ss_pred cCCCC------CcccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCC
Q 005734 541 ALPKS------KVSDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 541 ~~~~~------~~~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~ 584 (680)
..... +.....|+... ..|...+-|||++||+||.++....||.
T Consensus 720 ~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 720 TKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 43211 11122233322 2355778999999999999999999985
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8e-20 Score=186.12 Aligned_cols=243 Identities=15% Similarity=0.215 Sum_probs=171.9
Q ss_pred cccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~l 463 (680)
++||.|.|++||+++.. ..+.||+|.+..... ......|+++|..+. |.||+++.++....+ ...+
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-------p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd--~v~i 112 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-------PSRILNELEMLYRLGGSDNIIKLNGCFRNND--QVAI 112 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeecccccC-------chHHHHHHHHHHHhccchhhhcchhhhccCC--eeEE
Confidence 89999999999999863 467899998865542 234789999999995 999999999998877 7799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEcccccccccC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIAL 542 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~~~~ 542 (680)
|+||++.-.-.++.. .++......+...+..||+|+|+. +||||||||+|+|.+.. +.-.|.|||+|....
T Consensus 113 vlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 113 VLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred EecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHH
Confidence 999999988888875 467888899999999999999999 99999999999999854 667899999997322
Q ss_pred CCC-------------Cc-ccc---------------------------------cccCCCCC------CCCCCCCeeeh
Q 005734 543 PKS-------------KV-SDD---------------------------------IENSVLPP------LADPETNIYSF 569 (680)
Q Consensus 543 ~~~-------------~~-~~~---------------------------------~~~~~~~~------~~s~~sDVySf 569 (680)
... .. .+. .+++..|+ .-+++.||||-
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 100 00 000 01111111 22667999999
Q ss_pred hHHHHHHHhCCCCCCccc-c-ccHHHHH--------HHHhcCCCC--ccc---------------ccC-cccCC------
Q 005734 570 GILMLEIISGKLPYCEEK-E-LSIEKWA--------ADYLNEPRN--FSC---------------MID-PSLKS------ 615 (680)
Q Consensus 570 GvvllElltG~~p~~~~~-~-~~~~~~~--------~~~~~~~~~--~~~---------------~~d-~~l~~------ 615 (680)
|||++-+++++.||.... + ..+.+.+ ++...-.+. +.+ -++ ..+..
T Consensus 265 GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~ 344 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNT 344 (418)
T ss_pred cceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccce
Confidence 999999999999986322 1 1122211 111000011 000 000 00000
Q ss_pred ----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 ----FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+..+..++++..+|+..+|.+|.|++|.++.
T Consensus 345 ~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 345 EREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred eeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 011123478899999999999999999999863
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-19 Score=175.54 Aligned_cols=143 Identities=13% Similarity=0.073 Sum_probs=108.9
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhH---------------------HHHHHHHHHHHHHHHcCCCCccc
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL---------------------KSQEMAYRKQVDTLSRINHKNFV 447 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~---------------------~~~~~~f~~E~~~l~~l~H~niv 447 (680)
..||+|++|.||+|..++|+.||||+++........ +........|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 579999999999999889999999998754311100 00012234599999999888775
Q ss_pred ceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeeecCCCCCCeeecC
Q 005734 448 NLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM-HHELNPPVAHSNLSSHCIYLTD 526 (680)
Q Consensus 448 ~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yL-H~~~~~~ivHrDlKp~NILld~ 526 (680)
....+... ..+|||||++++++...... ...++.....+++.+++.+|+|+ |+. +|+||||||+|||++
T Consensus 83 ~p~~~~~~----~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 83 CPEPILLK----SHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCcEEEec----CCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 44333222 23899999998877654321 23688999999999999999999 566 899999999999998
Q ss_pred CCCeEEccccccccc
Q 005734 527 DYAAKVAEICFTTIA 541 (680)
Q Consensus 527 ~~~~ki~DFGla~~~ 541 (680)
++.++++|||+|...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 478999999998754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-19 Score=173.69 Aligned_cols=143 Identities=14% Similarity=0.073 Sum_probs=112.3
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh---------------------hHHHHHHHHHHHHHHHHcCCCCccc
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD---------------------WLKSQEMAYRKQVDTLSRINHKNFV 447 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~---------------------~~~~~~~~f~~E~~~l~~l~H~niv 447 (680)
..||+|++|.||+|...+|+.||||+........ ........+..|.+.+.+++|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5799999999999998889999999987653110 0011122356899999999999986
Q ss_pred ceeeEEecCCCCceEEEEEecCCCChhhh-hccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeec
Q 005734 448 NLIGYCEDDEPFNRMMVFEYAPNGTVFEH-LHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 448 ~l~g~~~~~~~~~~~lV~ey~~~GsL~~~-l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld 525 (680)
....+... ..++||||++++++... +. ...++..+..+++.+++.++.|+|+ . +|+||||||+||+++
T Consensus 83 ~p~~~~~~----~~~lVmE~~~g~~~~~~~l~---~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 83 VPEPILLK----KNVLVMEFIGDDGSPAPRLK---DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CceEEEec----CCEEEEEEecCCCchhhhhh---hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 55554433 23899999998865443 32 1357788899999999999999999 7 999999999999999
Q ss_pred CCCCeEEcccccccccC
Q 005734 526 DDYAAKVAEICFTTIAL 542 (680)
Q Consensus 526 ~~~~~ki~DFGla~~~~ 542 (680)
++.++|+|||+++...
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 7899999999998764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-18 Score=179.86 Aligned_cols=249 Identities=12% Similarity=0.145 Sum_probs=173.9
Q ss_pred ccccCCCCCCeEEEEEeCCC--CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC----CcccceeeEEe-cCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTLSSG--VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH----KNFVNLIGYCE-DDEPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g--~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~~-~~~~~~ 460 (680)
...||+|+||.||.+..... ..+|+|......... ...+..|+.++..+.+ +++..++.... .+. .
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~-----~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~--~ 95 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK-----PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED--F 95 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC-----CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc--e
Confidence 48999999999999997543 468888775532111 1146778888888863 57777777773 444 6
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-----CCeEEccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-----YAAKVAEI 535 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-----~~~ki~DF 535 (680)
.++||+.+ +.+|.++........++-.+.++|+.|+..+|.+||+. +++||||||.|+++... ..+.+.||
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 79999988 78999987555556899999999999999999999998 99999999999999865 45899999
Q ss_pred cccc--ccCCCCCc---cc-c----c--------ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHH
Q 005734 536 CFTT--IALPKSKV---SD-D----I--------ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAAD 597 (680)
Q Consensus 536 Gla~--~~~~~~~~---~~-~----~--------~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~ 597 (680)
|+++ .+...... .. . . .........+++.|+||++.++.|+..|..||...........+..
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~ 251 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEK 251 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHH
Confidence 9998 43211110 00 0 0 0111234457889999999999999999999965432222222221
Q ss_pred HhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 598 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.... .... . .....+.++.++...+-..+..++|....+...+++.....
T Consensus 252 ~~~~-~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 252 DPRK-LLTD----R----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred Hhhh-hccc----c----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111 0000 0 11122345666666666789999999999999988876543
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-18 Score=170.14 Aligned_cols=168 Identities=8% Similarity=0.066 Sum_probs=125.6
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHH------HHHHHHHHHHHcCCCCcccceeeEEecCC-----
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQE------MAYRKQVDTLSRINHKNFVNLIGYCEDDE----- 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~------~~f~~E~~~l~~l~H~niv~l~g~~~~~~----- 457 (680)
+++|.|+||.||.... ++..+|||.+....... +... ..|.+|++.+.+++|++|..+..+.....
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~--~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~ 113 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT--ERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLR 113 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCch--HHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccc
Confidence 8999999999999655 57789999986543222 1111 23689999999999999999988855332
Q ss_pred -CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 458 -PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 458 -~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
....+|||||+++.+|.++.. ++. ....+++.+++.+|.. +++|||+||+||+++.++ ++++|||
T Consensus 114 ~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg 179 (232)
T PRK10359 114 YAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLS 179 (232)
T ss_pred ccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECC
Confidence 114689999999999988742 222 3456899999999999 999999999999999988 9999999
Q ss_pred cccccCCCCCcccccccCCCCCCCCCCCCeeehhHHHHHHH
Q 005734 537 FTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEII 577 (680)
Q Consensus 537 la~~~~~~~~~~~~~~~~~~~~~~s~~sDVySfGvvllEll 577 (680)
..+.......... +.....+..++|+|||||.+.-+.
T Consensus 180 ~~~~~~e~~a~d~----~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 180 GKRCTAQRKAKDR----IDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CcccccchhhHHH----HHHHhHhcccccccceeEeehHHH
Confidence 8876543222211 111122346899999999988654
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.5e-17 Score=168.77 Aligned_cols=246 Identities=18% Similarity=0.283 Sum_probs=178.7
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC-cccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK-NFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..||.|+||.||++... ..+++|.+....... ......|.+|+.++..+.|+ +++++..++.... ..+++++|
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~ 79 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESK--SKEVERFLREIQILASLNHPPNIVKLYDFFQDEG--SLYLVMEY 79 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccc--hhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC--EEEEEEec
Confidence 57899999999999987 678888886554322 12467899999999999988 7999999996655 46999999
Q ss_pred cCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKEM-DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~-~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~~ 545 (680)
+.++++.+++..... ..++......+..+++.++.|+|.. +++|||+||+||+++... .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977653321 2688899999999999999999998 899999999999999988 79999999998654322
Q ss_pred Cc---------c-----cccccCCCC---CCCCCCCCeeehhHHHHHHHhCCCCCCcccc----ccHHHHHHHHhcCCCC
Q 005734 546 KV---------S-----DDIENSVLP---PLADPETNIYSFGILMLEIISGKLPYCEEKE----LSIEKWAADYLNEPRN 604 (680)
Q Consensus 546 ~~---------~-----~~~~~~~~~---~~~s~~sDVySfGvvllElltG~~p~~~~~~----~~~~~~~~~~~~~~~~ 604 (680)
.. . ...|+.... ...+...|+||+|++++++++|+.|+..... ....+.+...... .
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 234 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--S 234 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--c
Confidence 11 0 111222222 4677889999999999999999999765432 1122222111110 0
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......+.. .......+.+++..|+..+|..|.++.+....
T Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSN---PELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccc---cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000011100 01223567899999999999999998887764
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.4e-18 Score=159.36 Aligned_cols=245 Identities=10% Similarity=0.124 Sum_probs=175.6
Q ss_pred cccCCCCCCeEEEEE-eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC-CcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-KNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~-~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||.|+||.+|.|. +.+|..||||+-+.+.. .....-|.++.+.++| ..|..+.-|..+.. +..+|||
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-------hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~--ynvlVMd 91 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-------HPQLLYESKVYRILQGGVGIPHIRHYGTEKD--YNVLVMD 91 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCC-------CcchhHHHHHHHHhccCCCCchhhhhccccc--cceeeee
Confidence 789999999999998 57899999998765432 1245678888888864 45666666777666 6699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~~ 543 (680)
.+ +.||++++.-.. ..++-.+.+-+|-|+..-++|+|.. .++||||||+|+|..- ...+.++|||+|+.+..
T Consensus 92 LL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred cc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 99 789999986443 3578889999999999999999999 8999999999999963 35689999999998764
Q ss_pred CCCccccc-------cc--------CCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccc
Q 005734 544 KSKVSDDI-------EN--------SVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCM 608 (680)
Q Consensus 544 ~~~~~~~~-------~~--------~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (680)
..+..... .+ ......-+.+.|+-|.|.||...-.|..||.+....+..+..++.....-
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~----- 241 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKM----- 241 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhc-----
Confidence 32211110 00 01122336678999999999999999999987654444333333322211
Q ss_pred cCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 609 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
...+.......+.++.-.+.-|-..--++-|...-+.+.+.-+.
T Consensus 242 -s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 242 -STPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred -CCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 01111122334567778888898888888898777766665553
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.8e-17 Score=185.16 Aligned_cols=132 Identities=36% Similarity=0.585 Sum_probs=92.5
Q ss_pred chHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCC-----ccceeeeCC------CcEeEEEcCCCCCcccCCcccCCCCC
Q 005734 28 LNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPC-----LWSGVRCLN------GKVQMLDMKERSLEGTLAPDLGKLSD 96 (680)
Q Consensus 28 ~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c-----~w~gv~c~~------~~l~~L~l~~~~l~g~~p~~~~~l~~ 96 (680)
...|..+|+++|..+. ++. ..+|+. +|| .|.||.|.. ..|+.|+|++|.+.|.+|+.++.|++
T Consensus 370 ~~~~~~aL~~~k~~~~-~~~--~~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~ 443 (623)
T PLN03150 370 LLEEVSALQTLKSSLG-LPL--RFGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRH 443 (623)
T ss_pred CchHHHHHHHHHHhcC-Ccc--cCCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCC
Confidence 4578899999999884 432 248964 345 699999952 13667777777777777777777777
Q ss_pred CCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcC
Q 005734 97 LRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSR 165 (680)
Q Consensus 97 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~ 165 (680)
|+.|+|++|.|.|.+|..++.+++|+.|+|++|+++|.+|..+++|++|+.|+|++|+++|.+|..++.
T Consensus 444 L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~ 512 (623)
T PLN03150 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGG 512 (623)
T ss_pred CCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhh
Confidence 777777777777777766777777777777777777767766666777777777766666666665544
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=161.71 Aligned_cols=135 Identities=10% Similarity=0.103 Sum_probs=102.8
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-----CCCcccceeeEEecCCC-Cc-e
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-----NHKNFVNLIGYCEDDEP-FN-R 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-----~H~niv~l~g~~~~~~~-~~-~ 461 (680)
.+||+|++|.||. .++....+||++..... ...+++.+|+++++++ .||||++++|++.++.. .. .
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~-----~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD-----GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEecccc-----chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 7899999999996 44333346887765321 2345789999999999 57999999999987642 12 2
Q ss_pred EEEEEe--cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCeeecCCCCCCeeecC----CCCeEEcc
Q 005734 462 MMVFEY--APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL-QYMHHELNPPVAHSNLSSHCIYLTD----DYAAKVAE 534 (680)
Q Consensus 462 ~lV~ey--~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL-~yLH~~~~~~ivHrDlKp~NILld~----~~~~ki~D 534 (680)
.+|+|| +++|+|.+++... .++.. ..++.++..++ +|||+. +|+||||||+|||++. +..++|+|
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 378999 6689999999542 35554 35677888787 999999 9999999999999973 34799999
Q ss_pred cccc
Q 005734 535 ICFT 538 (680)
Q Consensus 535 FGla 538 (680)
|+.+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 5444
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.7e-17 Score=156.79 Aligned_cols=178 Identities=13% Similarity=0.204 Sum_probs=126.9
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHH-HHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLK-SQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
..|++|+||+||.+.- ++..++.+.+.... .+.. -....|.+|+++|++++ |+++++++++ + ..+++||
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~--~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~--~~~lvme 78 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDLSAAP--WWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D--GRHLDRS 78 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeecccccch--hhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c--CEEEEEe
Confidence 6899999999997665 55666655554322 1111 12235889999999995 5889999886 2 3589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC-CCCCeeecCCCCeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL-SSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDl-Kp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|+++.+|.+.+.. ....+..+++++|.++|.. +|+|||| ||+|||++.++.++|+|||++.......
T Consensus 79 yI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 79 YLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9999998765421 1245778999999999999 9999999 7999999999999999999998654333
Q ss_pred Cc----c-ccc------ccCCCCCCCCC------------CCCeeehhHHHHHHHhCCCCCCccc
Q 005734 546 KV----S-DDI------ENSVLPPLADP------------ETNIYSFGILMLEIISGKLPYCEEK 587 (680)
Q Consensus 546 ~~----~-~~~------~~~~~~~~~s~------------~sDVySfGvvllElltG~~p~~~~~ 587 (680)
.. . .+. ....+++..++ ..+-++-|.-+|.++||..+..++.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 11 0 000 00122333322 2577899999999999998865443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5e-17 Score=160.71 Aligned_cols=139 Identities=14% Similarity=0.227 Sum_probs=113.9
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh--h-HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD--W-LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~--~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.||+|++|.||+|.. +|..++||+......+. . .......+.+|++++..++|+++.....++.+.. ..++||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE--NFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC--CCEEEE
Confidence 4689999999999988 56778998765433211 1 1122356889999999999999988887776655 568999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
||+++++|.+++... .+ .+..++.+++.+|+++|+. +++|||++|.||+++ ++.++|+|||+++.
T Consensus 79 e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999998532 22 8899999999999999998 999999999999999 78899999998765
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=159.53 Aligned_cols=143 Identities=15% Similarity=0.110 Sum_probs=108.6
Q ss_pred ccccCCCCCCeEEEEE--eCCCCEEEEEEeeeccchh-------------------hHHHHHHHHHHHHHHHHcCCCCc-
Q 005734 388 SNIIDTQSGCTIYKGT--LSSGVEIAVAATAITSSKD-------------------WLKSQEMAYRKQVDTLSRINHKN- 445 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~--~~~g~~vaVK~~~~~~~~~-------------------~~~~~~~~f~~E~~~l~~l~H~n- 445 (680)
.+.||+|++|.||+|+ ..+|+.||||++....... ........+..|++.+.++.|..
T Consensus 33 ~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i 112 (237)
T smart00090 33 GGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGV 112 (237)
T ss_pred CCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4789999999999998 5789999999987543110 00112235678999999997643
Q ss_pred -ccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eeecCCCCCCee
Q 005734 446 -FVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP-VAHSNLSSHCIY 523 (680)
Q Consensus 446 -iv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~-ivHrDlKp~NIL 523 (680)
+.+++++ . ..++||||+++++|....... ..+...+...++.+++.+++|||+. + |+||||||+||+
T Consensus 113 ~~p~~~~~---~---~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIl 181 (237)
T smart00090 113 PVPKPIAW---R---RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNIL 181 (237)
T ss_pred CCCeeeEe---c---CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEE
Confidence 3334432 1 248999999998887664222 2355556788999999999999998 8 999999999999
Q ss_pred ecCCCCeEEcccccccccC
Q 005734 524 LTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 524 ld~~~~~ki~DFGla~~~~ 542 (680)
++ ++.++++|||.+....
T Consensus 182 i~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 182 VH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EE-CCCEEEEEChhhhccC
Confidence 99 8899999999987543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-16 Score=156.37 Aligned_cols=246 Identities=9% Similarity=0.126 Sum_probs=173.3
Q ss_pred ccccCCCCCCeEEEEE-eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~-~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
...||+|+||..+.|+ +-+++.||||--..++. .-+...|-+..+.+ .-++|..++-|-.++. +-.||+
T Consensus 33 GkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~-------APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~--~NiLVi 103 (449)
T KOG1165|consen 33 GKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE-------APQLRDEYRTYKLLGGTEGIPQVYYFGQEGK--YNILVI 103 (449)
T ss_pred ccccccCcceeeecccccccCceEEEEeccccCC-------cchHHHHHHHHHHHcCCCCCCceeeeccccc--hhhhhh
Confidence 4789999999999998 56899999997654431 23455666666666 4667766654444444 568999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-----CCCeEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-----DYAAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-----~~~~ki~DFGla~~ 540 (680)
|.+ +-||+|+..-.. ..++..+..-||+|+..-++|+|++ .+|.|||||+|+||.. ...++|.|||+|+.
T Consensus 104 dLL-GPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhh-CcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 999 789999886443 4689999999999999999999999 9999999999999964 34589999999999
Q ss_pred cCCCCCccccc---------------ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 541 ALPKSKVSDDI---------------ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 541 ~~~~~~~~~~~---------------~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
+....+..... ..+..+..-+.+.|.-|+|-|....+-|..||.+.......+..++.... ...
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~-Kr~ 257 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGET-KRS 257 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccc-ccc
Confidence 87433222111 12234455677899999999999999999999887655555444443322 111
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.. +..+.++.++++..-+.---..+-.+-|..+-+...+.++.
T Consensus 258 T~-----i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 258 TP-----IEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred CC-----HHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 11 11122233445555555444567777888877776666664
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.8e-17 Score=157.11 Aligned_cols=135 Identities=16% Similarity=0.255 Sum_probs=107.6
Q ss_pred ccCCCCCCeEEEEEeCCCCEEEEEEeeeccch--hh-HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTLSSGVEIAVAATAITSSK--DW-LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~--~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+||+|++|.||+|.+ +|..|+||+...+... .. .......+.+|++++.+++|+++.....++.... ..++|||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD--NKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--CCEEEEE
Confidence 489999999999995 5678999986543211 11 1122456889999999999988766655655554 4589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
|+++++|.+++.... ..++.+++.+|++||.. +++|||+||.||+++ ++.+++.|||+++.
T Consensus 78 ~~~g~~l~~~~~~~~---------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN---------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EECCccHHHHHhhcH---------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999875321 08899999999999998 999999999999999 78999999999865
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-17 Score=187.98 Aligned_cols=248 Identities=13% Similarity=0.130 Sum_probs=166.5
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeecc-chhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITS-SKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~-~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
..+++|.|++|.|+..... .....+.|....+. ..+........+..|+.+-.+++|+|++..+..+.+.. ...-+
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~--~~~~~ 399 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID--GILQS 399 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc--cchhh
Confidence 3489999999988777643 33334444332110 01111122233777888889999999988877776655 23444
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
||||++ +|...+... ..+.-.++-.+..|+..|++|+|+. +|.|||+|++|++++.++.+||+|||.+......
T Consensus 400 mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 999999 999998543 3578888999999999999999999 9999999999999999999999999998765421
Q ss_pred CC----cc--------cccccCCCCCCCCC-CCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 545 SK----VS--------DDIENSVLPPLADP-ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 545 ~~----~~--------~~~~~~~~~~~~s~-~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
.. .. ...||...+..+.+ -.||||.||++..|++|+.||......+... .......... +..
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~~~~~~~--~~~ 548 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNNYSDQRN--IFE 548 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhccccccc--ccc
Confidence 11 11 11133333333433 3899999999999999999996432111100 0000000000 000
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.........+.+...++.++++.+|.+|.|+++|++
T Consensus 549 ~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 549 GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 011122344567889999999999999999999986
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.8e-17 Score=164.25 Aligned_cols=228 Identities=14% Similarity=0.185 Sum_probs=144.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC-----------CcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-----------KNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-----------~niv~l~g~~~~ 455 (680)
.+.||.|+++.||.++.. +|+++|||+..... +......+++++|.-....+.+ +-++++--.-..
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~--~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA--DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESS--TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEeccc--ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 479999999999999985 58999999987765 2333445667777665555433 222322111111
Q ss_pred CCC-----------C---ceEEEEEecCCCChhhhhcc---C--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecC
Q 005734 456 DEP-----------F---NRMMVFEYAPNGTVFEHLHI---K--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516 (680)
Q Consensus 456 ~~~-----------~---~~~lV~ey~~~GsL~~~l~~---~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrD 516 (680)
+.+ + ..+++|+-+ .++|.+.+.. . ....+....|+.+..|+.+.+++||+. ++||+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecc
Confidence 110 0 236677777 5689888642 1 122455678889999999999999999 999999
Q ss_pred CCCCCeeecCCCCeEEcccccccccCCCCCcc-----cccccCC--------CCCCCCCCCCeeehhHHHHHHHhCCCCC
Q 005734 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSV--------LPPLADPETNIYSFGILMLEIISGKLPY 583 (680)
Q Consensus 517 lKp~NILld~~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~--------~~~~~s~~sDVySfGvvllElltG~~p~ 583 (680)
|||+|++++.+|.++++||+-........... ...|+.. ..-.++.+.|.|++|+++|.|++|+.||
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf 250 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF 250 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence 99999999999999999998766544221110 0111110 1123577889999999999999999999
Q ss_pred CccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCC
Q 005734 584 CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQR 639 (680)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~R 639 (680)
+........+ ..+..+. +.++.+..|+...++.+|.+|
T Consensus 251 ~~~~~~~~~~-----------------~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 251 GLSSPEADPE-----------------WDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCCGGGSTSG-----------------GGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCcccccc-----------------ccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 7543211111 1334445 667899999999999999988
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=179.76 Aligned_cols=137 Identities=13% Similarity=0.186 Sum_probs=110.0
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeecc--chhh-HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITS--SKDW-LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~--~~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.++||+|+||+||+|.+.+.. +++|+...+. .+.. .......+.+|++++.+++|++++....++.... ..++|
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv 414 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE--EKTIV 414 (535)
T ss_pred cceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC--CCEEE
Confidence 489999999999999986544 4444332221 1111 1123457899999999999999998888887765 46899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
|||+++++|.+++. .+.+++.+++++|+|||+. +++|||+||+|||+ +++.++|+|||+++..
T Consensus 415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 99999999999874 4678999999999999998 99999999999999 5778999999998764
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-16 Score=153.31 Aligned_cols=138 Identities=14% Similarity=0.184 Sum_probs=106.9
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh-----------------hHHHHHHHHHHHHHHHHcCCCCc--ccc
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD-----------------WLKSQEMAYRKQVDTLSRINHKN--FVN 448 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~-----------------~~~~~~~~f~~E~~~l~~l~H~n--iv~ 448 (680)
.+.||+|+||.||++..++|+.||||+........ +.......+..|..++.++.|++ +..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 48899999999999999899999999875432100 00111234778999999998874 444
Q ss_pred eeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 005734 449 LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 449 l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 528 (680)
.++. . ..++||||+++++|...... ....+++.+++.++.++|+. +|+||||||+||++++++
T Consensus 100 ~~~~----~--~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 100 PIDW----N--RHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDE 162 (198)
T ss_pred eeec----C--CceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCC
Confidence 4432 2 34899999999998776421 23467889999999999997 999999999999999999
Q ss_pred CeEEcccccccccC
Q 005734 529 AAKVAEICFTTIAL 542 (680)
Q Consensus 529 ~~ki~DFGla~~~~ 542 (680)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999986554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.5e-17 Score=180.55 Aligned_cols=239 Identities=14% Similarity=0.189 Sum_probs=164.2
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+-+|.+.|=+|.||+.++|. |+||++..+...- .-...++-..|++ ....+|||.+++.-+-.... ..|||=+
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~-sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k--AAylvRq 101 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTI-SLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK--AAYLVRQ 101 (1431)
T ss_pred eecccCchhhhhhhhccCCCce-EEEEEEeccCCCC-CchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH--HHHHHHH
Confidence 3478999999999999999998 8899987654221 1111222233444 44558999999876655554 5688888
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC--CC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL--PK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~--~~ 544 (680)
|..+ +|+|.+..+ .-+...++.=||.|+..||.-+|.. +|.|||||.+|||+..=.-+.|+||.--+... .+
T Consensus 102 yvkh-nLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 9966 999998643 3567778888999999999999999 99999999999999988889999996544321 11
Q ss_pred CCcc-------------cccccCC-----------CCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHh
Q 005734 545 SKVS-------------DDIENSV-----------LPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYL 599 (680)
Q Consensus 545 ~~~~-------------~~~~~~~-----------~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~ 599 (680)
.... ...||.. .....+++.||||.|||+.||++ |++||.-. .+.++...
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS---QL~aYr~~-- 250 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS---QLLAYRSG-- 250 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---HHHhHhcc--
Confidence 1100 0012211 11236788999999999999999 67777521 12111111
Q ss_pred cCCCCcccccCcc--cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 600 NEPRNFSCMIDPS--LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 600 ~~~~~~~~~~d~~--l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
. -.|++ +... +-..+..++..|++.||++|.++++.++.-..
T Consensus 251 -~------~~~~e~~Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 251 -N------ADDPEQLLEKI---EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred -C------ccCHHHHHHhC---cCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 0 01110 0000 01367899999999999999999999987443
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.5e-15 Score=141.81 Aligned_cols=140 Identities=14% Similarity=0.109 Sum_probs=98.5
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHH-------------------HHHHHHHHHHHHcCCCCc--cc
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQ-------------------EMAYRKQVDTLSRINHKN--FV 447 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~-------------------~~~f~~E~~~l~~l~H~n--iv 447 (680)
+.||+|+||+||+|...+|+.||||+............. ......|.+.+.++++.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 579999999999999888999999987643211100000 011235666666665443 33
Q ss_pred ceeeEEecCCCCceEEEEEecCCCChhhh-hccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeec
Q 005734 448 NLIGYCEDDEPFNRMMVFEYAPNGTVFEH-LHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 448 ~l~g~~~~~~~~~~~lV~ey~~~GsL~~~-l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld 525 (680)
+.+++ . ..++||||++++.+... +.... .. .+..+++.+++.++.++|+ . +|+||||||+||+++
T Consensus 83 ~~~~~----~--~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 83 KPIDL----N--RHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred ceEec----C--CCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 44432 1 34899999999654322 11111 11 5678899999999999998 6 999999999999999
Q ss_pred CCCCeEEcccccccccC
Q 005734 526 DDYAAKVAEICFTTIAL 542 (680)
Q Consensus 526 ~~~~~ki~DFGla~~~~ 542 (680)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8999999999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=134.46 Aligned_cols=134 Identities=12% Similarity=0.106 Sum_probs=112.3
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC--CcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH--KNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|.++.||+++..+ ..++||....... ...+.+|+.++.+++| .++.+++++....+ ..++++|
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~--~~~~v~e 73 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-------GADREREVAILQLLARKGLPVPKVLASGESDG--WSYLLME 73 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc-------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC--ccEEEEE
Confidence 578999999999999865 6789998754321 3468899999999976 58899988887665 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
|++++.+... ++..+..++.+++++++++|.....+++|||+||+||++++++.+++.|||.++..
T Consensus 74 ~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 74 WIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 9988777644 66778889999999999999875568999999999999999899999999988653
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.8e-15 Score=147.77 Aligned_cols=190 Identities=20% Similarity=0.222 Sum_probs=126.9
Q ss_pred CCCcccceeeEEecC-------------------------CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHH
Q 005734 442 NHKNFVNLIGYCEDD-------------------------EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMG 496 (680)
Q Consensus 442 ~H~niv~l~g~~~~~-------------------------~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ 496 (680)
+|||||++.+++.+. .+...|+||.-.+. +|.+++..+ ..+...+.-|..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~---~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR---HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC---CCchHHHHHHHHH
Confidence 688888887766431 11135788887755 899888644 3556667778899
Q ss_pred HHHHHHHHhcCCCCCeeecCCCCCCeee--cCCC--CeEEcccccccccCC------CCCcc---c-----ccccC--CC
Q 005734 497 TAYCLQYMHHELNPPVAHSNLSSHCIYL--TDDY--AAKVAEICFTTIALP------KSKVS---D-----DIENS--VL 556 (680)
Q Consensus 497 ia~gL~yLH~~~~~~ivHrDlKp~NILl--d~~~--~~ki~DFGla~~~~~------~~~~~---~-----~~~~~--~~ 556 (680)
+.+|..|||.+ +|.|||+|++|||+ |+|. ...|+|||++-.... ..+.. + ..|+. ..
T Consensus 350 lLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999999 99999999999999 4554 357899998744321 00000 0 01111 11
Q ss_pred CCC----CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHcc
Q 005734 557 PPL----ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECI 632 (680)
Q Consensus 557 ~~~----~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~ 632 (680)
|+. --.|+|.|+.|-+.||+++...||....+..+... .+++ ..+...++.++..+.+++...+
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r---~Yqe---------~qLPalp~~vpp~~rqlV~~lL 494 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR---TYQE---------SQLPALPSRVPPVARQLVFDLL 494 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh---hhhh---------hhCCCCcccCChHHHHHHHHHh
Confidence 221 13579999999999999999999976432222110 0111 1122334455567889999999
Q ss_pred ccCCCCCCCHHHHHHHHH
Q 005734 633 KTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 633 ~~~P~~RPtm~ev~~~L~ 650 (680)
+.||++|++..-....|.
T Consensus 495 ~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 495 KRDPSKRVSPNIAANVLN 512 (598)
T ss_pred cCCccccCCccHHHhHHH
Confidence 999999999776665543
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-15 Score=163.32 Aligned_cols=185 Identities=15% Similarity=0.189 Sum_probs=143.2
Q ss_pred ccCCCCCCeEEEEE----eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEE
Q 005734 390 IIDTQSGCTIYKGT----LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~----~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV 464 (680)
.+|+|+||.|+... .+.|...|.|+.+........+. ....|..++..++ ||.+|++.-.+..+. ..+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~---~t~~er~il~~~~~~~f~v~lhyafqt~~--kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT---HTKQERIILAFVHNTPFLVKLHYAFQTDG--KLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc---ccccHHHHHhhccCCCceeeeeeeecccc--chhHh
Confidence 36899999888654 23566677777665543322111 3556778888887 999999987777766 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
.+|..+|.|...+.. ....+......+...+|-|++++|.. +|+|||+|++||++|.+|.+++.|||+++...+.
T Consensus 76 ld~~rgg~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~ 150 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE 150 (612)
T ss_pred hhhcccchhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhh
Confidence 999999999988853 34567777777888899999999999 9999999999999999999999999999987644
Q ss_pred CCcccccccCCCCCC---CCCCCCeeehhHHHHHHHhCCCCCCc
Q 005734 545 SKVSDDIENSVLPPL---ADPETNIYSFGILMLEIISGKLPYCE 585 (680)
Q Consensus 545 ~~~~~~~~~~~~~~~---~s~~sDVySfGvvllElltG~~p~~~ 585 (680)
... ....+|++++. .....|-|||||+++||+||-.||..
T Consensus 151 ~~~-cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 151 KIA-CGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhc-ccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence 333 11234444433 35779999999999999999999975
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.8e-14 Score=141.56 Aligned_cols=142 Identities=12% Similarity=0.077 Sum_probs=107.9
Q ss_pred cccC-CCCCCeEEEEEeCCCCEEEEEEeeeccc-----h-h--hHHHHHHHHHHHHHHHHcCCCCcc--cceeeEEecCC
Q 005734 389 NIID-TQSGCTIYKGTLSSGVEIAVAATAITSS-----K-D--WLKSQEMAYRKQVDTLSRINHKNF--VNLIGYCEDDE 457 (680)
Q Consensus 389 ~~iG-~G~~g~Vyk~~~~~g~~vaVK~~~~~~~-----~-~--~~~~~~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~~ 457 (680)
.+|| .||.|+||+.... +..++||....... . . ++......+.+|++++.+++|+++ ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 6888 8999999999886 66788887754221 0 0 112234568899999999998885 67777755433
Q ss_pred CC--ceEEEEEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcc
Q 005734 458 PF--NRMMVFEYAPN-GTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534 (680)
Q Consensus 458 ~~--~~~lV~ey~~~-GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~D 534 (680)
.. ..++|+||+++ .+|.+++... .++.. .+.+++.+|++||.. +|+||||||.|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEE
Confidence 21 23599999997 6899887532 34432 356899999999998 999999999999999988999999
Q ss_pred ccccccc
Q 005734 535 ICFTTIA 541 (680)
Q Consensus 535 FGla~~~ 541 (680)
||.++..
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988764
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-14 Score=166.15 Aligned_cols=179 Identities=15% Similarity=0.190 Sum_probs=133.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC---CCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN---HKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lV 464 (680)
+..||+|+||+||+|+..+|+.||+|+-+.... | +|.--.+++.|++ -+-|..+...+.-.+ ..+||
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~--W------EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~--~S~lv 772 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP--W------EFYICLQVMERLKPQMLPSIMHISSAHVFQN--ASVLV 772 (974)
T ss_pred EeeeccccceEEEEeecCCCcEEEEEeecCCCc--e------eeeehHHHHHhhchhhhcchHHHHHHHccCC--cceee
Confidence 488999999999999998899999998754431 1 1222334444444 123333433333344 45899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-------CCCCeEEccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-------DDYAAKVAEICF 537 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-------~~~~~ki~DFGl 537 (680)
+||.+.|+|.+++. ..+.++|.-.+.++.++++-+.+||.. +||||||||+|+||. +...++|+|||.
T Consensus 773 ~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 773 SEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred eeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 99999999999996 455799999999999999999999998 999999999999993 234689999998
Q ss_pred ccccC--CCC-Ccc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCC
Q 005734 538 TTIAL--PKS-KVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKL 581 (680)
Q Consensus 538 a~~~~--~~~-~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~ 581 (680)
+--+. ++. ... ....+...+...+.+.|-|.+.-+++-|+-|+.
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 85443 222 111 112344566778899999999999999999874
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-13 Score=149.66 Aligned_cols=146 Identities=16% Similarity=0.159 Sum_probs=104.3
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHH-----------------------------------HHHHHHHH
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLK-----------------------------------SQEMAYRK 433 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~-----------------------------------~~~~~f~~ 433 (680)
+.||.|++|.||+|++++|+.||||+......+.... ..+-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 6899999999999999999999999986543111100 01124667
Q ss_pred HHHHHHcCC----CCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHH-HHHHHhcCC
Q 005734 434 QVDTLSRIN----HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAY-CLQYMHHEL 508 (680)
Q Consensus 434 E~~~l~~l~----H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~-gL~yLH~~~ 508 (680)
|.+.+.+++ |.+-|.+-..+.+... ..+|||||+++++|.+....... .. .+.+++..+++ .+..+|..
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~- 276 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTS-ERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRD- 276 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcC-CceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhC-
Confidence 777776663 3333333333332211 46999999999999988643211 12 35667777766 46788887
Q ss_pred CCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 509 ~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+++|+|+||.||++++++.+++.|||++..+.
T Consensus 277 --g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 --GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred --CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 99999999999999999999999999998764
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2e-12 Score=128.12 Aligned_cols=195 Identities=19% Similarity=0.313 Sum_probs=129.7
Q ss_pred HHHHcCCCCcccceeeEEecCCC---CceEEEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 005734 436 DTLSRINHKNFVNLIGYCEDDEP---FNRMMVFEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNP 510 (680)
Q Consensus 436 ~~l~~l~H~niv~l~g~~~~~~~---~~~~lV~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~ 510 (680)
.-|-.+-|.|||+++.|+.+... .+...+.|||+-|++.++|+.. ....+....-.+++-||..||.|||+ |.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 34555679999999999976542 1467899999999999999743 33456666778899999999999998 799
Q ss_pred CeeecCCCCCCeeecCCCCeEEcccccccc--cC----C-CCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHh
Q 005734 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTI--AL----P-KSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIIS 578 (680)
Q Consensus 511 ~ivHrDlKp~NILld~~~~~ki~DFGla~~--~~----~-~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt 578 (680)
+|+|+++..+-|++..++-+||.----... .. . ..... ...+++......+..+|||+||...+||..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 999999999999999999888852110000 00 0 00000 011233333345667999999999999988
Q ss_pred CCC-CCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 579 GKL-PYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 579 G~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.. |..........+.+.......+ .- .-.+++..|++.+|+.||+|++.+..
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~~le---n~--------------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVIIGLE---NG--------------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCCcceeehhhhhhhheeecc---Cc--------------cccCcCcccccCCCCCCcchhhhhcC
Confidence 763 3332222222222222211100 00 11256789999999999999988754
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.2e-14 Score=125.95 Aligned_cols=159 Identities=22% Similarity=0.340 Sum_probs=121.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|.|+.|.++ .+|+.+..|.+|+.|++++|+|. .+|.+++.++.|+.|+++-|++. .+|..|+.++.|+.|||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 46788889999988 67888999999999999999998 78889999999999999999998 88999999999999999
Q ss_pred cCCccc-ccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhh
Q 005734 151 GNNKFE-GSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQ 229 (680)
Q Consensus 151 ~~N~l~-g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~ 229 (680)
..|+++ ..+|..|..++.|+-|+|++|-|.--.| .++.+.+++.+.+..|.|-. .|..++
T Consensus 110 tynnl~e~~lpgnff~m~tlralyl~dndfe~lp~--------------dvg~lt~lqil~lrdndll~-lpkeig---- 170 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPP--------------DVGKLTNLQILSLRDNDLLS-LPKEIG---- 170 (264)
T ss_pred cccccccccCCcchhHHHHHHHHHhcCCCcccCCh--------------hhhhhcceeEEeeccCchhh-CcHHHH----
Confidence 999886 4688888888999999999998764333 35566666666666666643 333333
Q ss_pred hhhhHHhhhhhhcccccCCCCCCC
Q 005734 230 NLINVARRKLLEQSSNLAAEPATV 253 (680)
Q Consensus 230 ~~~~l~~~~l~~~~n~l~~~~~~~ 253 (680)
.+..+. ++-...|+++..++..
T Consensus 171 ~lt~lr--elhiqgnrl~vlppel 192 (264)
T KOG0617|consen 171 DLTRLR--ELHIQGNRLTVLPPEL 192 (264)
T ss_pred HHHHHH--HHhcccceeeecChhh
Confidence 222222 4445667776665543
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.5e-13 Score=141.39 Aligned_cols=147 Identities=22% Similarity=0.347 Sum_probs=122.3
Q ss_pred CCcEeEEEcCCCCCcc-cCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccc-cCCCCCCcE
Q 005734 70 NGKVQMLDMKERSLEG-TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLKR 147 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~ 147 (680)
.++++++++..|+|.. .+|+++..|..|+.||||.|++. ..|..+...+++-+|+||+|++. .||.. |.+|+.|-+
T Consensus 77 Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 77 LPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLF 154 (1255)
T ss_pred chhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhh
Confidence 3567788888888863 58899999999999999999998 78999999999999999999998 67754 578999999
Q ss_pred EEccCCcccccCChhhcCCCCCCeeeccCccccc----ccCCc--------cccccccCCcccccCCCCCCcccCCCCCC
Q 005734 148 LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA----EVAGI--------RSVNRKFGQYGFKIGEDSLHTNGDHSCAN 215 (680)
Q Consensus 148 L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g----~~p~~--------~~~~~~~~~~~~~~~~~~~~~~l~~s~n~ 215 (680)
||||+|.+. .+|+.+.++.+|++|+|++|.+.- .+|+. .+.++.+.+++.++..+.++..+|+|+|+
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~ 233 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENN 233 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccC
Confidence 999999998 789999999999999999996532 34442 23345566777888889999999999999
Q ss_pred CCCC
Q 005734 216 LPGS 219 (680)
Q Consensus 216 l~~~ 219 (680)
|+..
T Consensus 234 Lp~v 237 (1255)
T KOG0444|consen 234 LPIV 237 (1255)
T ss_pred CCcc
Confidence 9853
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-12 Score=138.37 Aligned_cols=163 Identities=13% Similarity=0.247 Sum_probs=115.1
Q ss_pred ceEEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~-~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
+.++.|++|...+|.+||..+ .....+|...+.++.+++.|+.| + +.+|||+||.||....+...||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 358999999999999999643 45678999999999999999999 4 8999999999999999999999999999
Q ss_pred cccCCCCCc-------c-------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCC
Q 005734 539 TIALPKSKV-------S-------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPR 603 (680)
Q Consensus 539 ~~~~~~~~~-------~-------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~ 603 (680)
.......+. . ...|+...+..++.|.||||+|++|+|+++ =...+.... .. .-+++
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~------t~-~d~r~-- 474 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA------TL-TDIRD-- 474 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH------hh-hhhhc--
Confidence 877644311 0 111333344567899999999999999998 222221100 00 00111
Q ss_pred CcccccCccc-CCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 005734 604 NFSCMIDPSL-KSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 604 ~~~~~~d~~l-~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev 645 (680)
..++|.. .++ .+-..+..+.+.+.|.+||++.++
T Consensus 475 ---g~ip~~~~~d~-----p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 475 ---GIIPPEFLQDY-----PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ---CCCChHHhhcC-----cHHHHHHHHhcCCCcccCchHHHH
Confidence 1122111 122 233478899999999999954443
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.5e-11 Score=135.71 Aligned_cols=146 Identities=11% Similarity=0.062 Sum_probs=93.2
Q ss_pred cccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchh-----------------------------hHHHH------HHHHH
Q 005734 389 NIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKD-----------------------------WLKSQ------EMAYR 432 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~-----------------------------~~~~~------~~~f~ 432 (680)
+.||.|++|.||+|++++ |+.||||+......+. ...+. +-+|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 689999999999999987 9999999997542111 00011 12355
Q ss_pred HHHHHHHcCC----CCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHH-HHHHhcC
Q 005734 433 KQVDTLSRIN----HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYC-LQYMHHE 507 (680)
Q Consensus 433 ~E~~~l~~l~----H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~g-L~yLH~~ 507 (680)
+|...+.+++ +.+.|.+-..+.+-.. ..+|||||++++.+.+.-.-.. ...+ +.+++...++. +.-++..
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st-~~VLvmE~i~G~~l~d~~~l~~-~g~d---~~~la~~~v~~~~~Qif~~ 279 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCS-ETVMVMERMYGIPVSDVAALRA-AGTD---MKLLAERGVEVFFTQVFRD 279 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCC-CceEEEeeecCccHHhHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhC
Confidence 5665555553 4444443333332111 4689999999999987522111 1122 22333333322 2223344
Q ss_pred CCCCeeecCCCCCCeeecCCC----CeEEcccccccccC
Q 005734 508 LNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTIAL 542 (680)
Q Consensus 508 ~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~~~ 542 (680)
+++|+|+||.||+++.++ .+++.|||++..+.
T Consensus 280 ---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 280 ---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 999999999999999888 89999999998765
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.6e-11 Score=113.52 Aligned_cols=130 Identities=9% Similarity=0.068 Sum_probs=94.7
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccc-eeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVN-LIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~-l~g~~~~~~~~~~~lV~ey 467 (680)
+.++.|.++.||+++.. |..+++|....... ....+..|++++..+.+.++++ ++++.. . ..++||||
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~--~~~lv~e~ 72 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE------LLINRENEAENSKLAAEAGIGPKLYYFDP--E--TGVLITEF 72 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc------cccCHHHHHHHHHHHHHhCCCCceEEEeC--C--CCeEEEEe
Confidence 45788999999999876 67799987643321 1234678899999887666554 444332 2 24799999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL--NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~--~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+++.++.+.- .....++.+++++|+.||... ...++|||++|.||+++ ++.+++.||+.+..
T Consensus 73 i~G~~l~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 73 IEGSELLTED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cCCCcccccc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9998876531 011345678999999999873 23469999999999999 56899999998754
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.1e-11 Score=137.49 Aligned_cols=132 Identities=11% Similarity=0.214 Sum_probs=93.5
Q ss_pred HHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc---c---------------cccccCCCC--
Q 005734 498 AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV---S---------------DDIENSVLP-- 557 (680)
Q Consensus 498 a~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~---~---------------~~~~~~~~~-- 557 (680)
+.+++|||+. +|+|||+||+|.++..-|.+|+.|||+.+........ . ...++|..+
T Consensus 153 vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV 229 (1205)
T KOG0606|consen 153 VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV 229 (1205)
T ss_pred hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence 7789999998 9999999999999999999999999998875311100 0 111333333
Q ss_pred ---CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHcccc
Q 005734 558 ---PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKT 634 (680)
Q Consensus 558 ---~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~ 634 (680)
.-|....|.|++|+|+||.+.|+.||+++.++++... ++.+.....+- .+....++.+++.+.++.
T Consensus 230 ilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~---visd~i~wpE~--------dea~p~Ea~dli~~LL~q 298 (1205)
T KOG0606|consen 230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ---VISDDIEWPEE--------DEALPPEAQDLIEQLLRQ 298 (1205)
T ss_pred hhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhh---hhhhhcccccc--------CcCCCHHHHHHHHHHHHh
Confidence 2345669999999999999999999998765544433 22221111111 122236788999999999
Q ss_pred CCCCCCCHH
Q 005734 635 DLRQRPTMN 643 (680)
Q Consensus 635 ~P~~RPtm~ 643 (680)
+|..|---.
T Consensus 299 np~~Rlgt~ 307 (1205)
T KOG0606|consen 299 NPLCRLGTG 307 (1205)
T ss_pred ChHhhcccc
Confidence 999997433
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.6e-12 Score=143.47 Aligned_cols=240 Identities=15% Similarity=0.259 Sum_probs=162.6
Q ss_pred cccCCCCCCeEEEEEeCCC--CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSG--VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g--~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.-||+|+|+.|-....... ..+|+|.+.... + ..........|..+-..+. |+|++++++...+.+ ..+++.
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~--~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~--~~~~~~ 100 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPP-K--SEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR--SYLLSL 100 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCC-C--ccchhhhcCccccccccccccccccccCCccCCCc--cccccc
Confidence 4589999998887766433 344555444332 1 1122333445777777776 999999999998887 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH-HELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALP 543 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH-~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~ 543 (680)
+|..+|++.+-+........+-...-.+..++..|+.|+| .. ++.|||+||+|.+++..+ ..+++|||+|..+..
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999883222223445556677899999999999 66 999999999999999999 999999999988764
Q ss_pred -CCCcc------cccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc--HHHHHHHHhcCCCCcccc
Q 005734 544 -KSKVS------DDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELS--IEKWAADYLNEPRNFSCM 608 (680)
Q Consensus 544 -~~~~~------~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~ 608 (680)
..... +..+.+.++ .+..+..|+||.|+++.-+++|..|++.....+ ...|.... .....
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~- 252 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK----GRFTQ- 252 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc----ccccc-
Confidence 22111 112223222 245677999999999999999999987433211 11221111 00000
Q ss_pred cCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 609 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...........++..+++..+|+.|.+.+++-.
T Consensus 253 ------~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 253 ------LPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ------CccccCChhhhhcccccccCCchhccccccccc
Confidence 011112245667888888899999999877643
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.6e-11 Score=135.70 Aligned_cols=90 Identities=32% Similarity=0.487 Sum_probs=73.4
Q ss_pred CCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeecc
Q 005734 96 DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFD 175 (680)
Q Consensus 96 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~ 175 (680)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36777888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CcccccccCC
Q 005734 176 DYLTSAEVAG 185 (680)
Q Consensus 176 ~N~~~g~~p~ 185 (680)
+|.++|.+|.
T Consensus 499 ~N~l~g~iP~ 508 (623)
T PLN03150 499 GNSLSGRVPA 508 (623)
T ss_pred CCcccccCCh
Confidence 8888877776
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.8e-12 Score=114.28 Aligned_cols=135 Identities=24% Similarity=0.420 Sum_probs=120.2
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC-ccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS-GIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|++. .+|.+++.+++|+.|+++-|++. .+|..|+.++.|++|||++|+++ ..+|..|..|+.|+.|+
T Consensus 56 ~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlraly 133 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALY 133 (264)
T ss_pred hhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHH
Confidence 47889999999998 78999999999999999999998 89999999999999999999997 46899999999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
|++|.|. .+|..++.+++|+.|.+.+|.+-. ++.+++.+..+..+...+|.|+-..|.
T Consensus 134 l~dndfe-~lp~dvg~lt~lqil~lrdndll~--------------lpkeig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 134 LGDNDFE-ILPPDVGKLTNLQILSLRDNDLLS--------------LPKEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred hcCCCcc-cCChhhhhhcceeEEeeccCchhh--------------CcHHHHHHHHHHHHhcccceeeecChh
Confidence 9999999 799999999999999999987642 234677777888889999999865553
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-11 Score=130.63 Aligned_cols=162 Identities=16% Similarity=0.097 Sum_probs=117.9
Q ss_pred ceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCC
Q 005734 64 SGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLP 143 (680)
Q Consensus 64 ~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 143 (680)
+|++-...++..|+|..|+++..--..+.+|+.|+.|+|++|.|...-++.|...++|+.|+||+|+++..-+..|..|.
T Consensus 262 DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~ 341 (873)
T KOG4194|consen 262 DGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLS 341 (873)
T ss_pred CcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHH
Confidence 45555456788999999998866666788899999999999999988889999999999999999999966667788889
Q ss_pred CCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCcccc-------------ccccCCcc-cccCCCCCCccc
Q 005734 144 SLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV-------------NRKFGQYG-FKIGEDSLHTNG 209 (680)
Q Consensus 144 ~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~-------------~~~~~~~~-~~~~~~~~~~~l 209 (680)
.|+.|+|++|.+...--..|..+++|+.|||.+|.+++.|-..... .+.+.+.. ..|..+..++.|
T Consensus 342 ~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~L 421 (873)
T KOG4194|consen 342 QLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHL 421 (873)
T ss_pred HhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCccccee
Confidence 9999999999888655566888889999999999887765541100 00111111 344455556666
Q ss_pred CCCCCCCCCCcchhhh
Q 005734 210 DHSCANLPGSSETHLV 225 (680)
Q Consensus 210 ~~s~n~l~~~~~~~~~ 225 (680)
|+..|.+-...|..|.
T Consensus 422 dL~~NaiaSIq~nAFe 437 (873)
T KOG4194|consen 422 DLGDNAIASIQPNAFE 437 (873)
T ss_pred cCCCCcceeecccccc
Confidence 6666666555554443
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-09 Score=101.46 Aligned_cols=136 Identities=15% Similarity=0.216 Sum_probs=101.3
Q ss_pred ccCCCCCCeEEEEEeCCCCEEEEEEeeeccch--hhHH-HHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTLSSGVEIAVAATAITSSK--DWLK-SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~--~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+++|+-..+|.+.+.+ ..+.+|.-..+.-. ..+. -....-.+|.+++.+++--.|-.-.-|..++. ...|+||
T Consensus 3 ~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~--~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD--NGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCEEEEE
Confidence 57899999999998754 34666644333211 1111 22345778999999987555554444555555 5689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
|+++-.|.+.+... +..++..+-.-+.-||.. +|+|+||.++||+++++. +.++||||+...
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99998888888543 467788888889999999 999999999999998766 999999998753
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.8e-09 Score=99.69 Aligned_cols=146 Identities=12% Similarity=0.130 Sum_probs=104.0
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccch---hhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSK---DWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~---~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.++-+|+-+.|+++.++ |+...||.-..+.-. ..++-..+...+|.+.|.+++--.|.--.-++.+.. .-.|+|
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--~~~i~M 89 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--GGQIYM 89 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC--CCeEEE
Confidence 67889999999999986 666666643332211 122334567889999999987555544444444444 347999
Q ss_pred EecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeEEcccccccc
Q 005734 466 EYAPN-GTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~-GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~ki~DFGla~~ 540 (680)
||+++ -++.+++.........-.....++..|-+.+.-||.. .|+||||..+||+|..++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99965 3788887644333333333377889999999999999 999999999999996544 468999999764
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-09 Score=102.69 Aligned_cols=141 Identities=13% Similarity=0.145 Sum_probs=97.4
Q ss_pred cccCCCCCCeEEEEEeCC-------CCEEEEEEeeeccc-----hhhH----------------HHHHHHHHHHHHHHHc
Q 005734 389 NIIDTQSGCTIYKGTLSS-------GVEIAVAATAITSS-----KDWL----------------KSQEMAYRKQVDTLSR 440 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-------g~~vaVK~~~~~~~-----~~~~----------------~~~~~~f~~E~~~l~~ 440 (680)
..||.|--+.||.|.-.+ +..+|||+.+.... ..+. +.......+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998653 47899997764321 1111 0111123389999999
Q ss_pred CCC--CcccceeeEEecCCCCceEEEEEecCCCChhh-hhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeeecC
Q 005734 441 INH--KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFE-HLHIKEMDHLDWNARMRIIMGTAYCLQYM-HHELNPPVAHSN 516 (680)
Q Consensus 441 l~H--~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~-~l~~~~~~~l~~~~rl~ia~~ia~gL~yL-H~~~~~~ivHrD 516 (680)
++. -++.+.+++ . ..+|||||+.++.+.. .+.+ ..++..+..++..++..+|.+| |.. +|||||
T Consensus 83 l~~~Gv~vP~pi~~--~----~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL--K----KHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe--c----CCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 853 456666654 2 3489999997654322 2221 1244455667889999999999 666 999999
Q ss_pred CCCCCeeecCCCCeEEcccccccccC
Q 005734 517 LSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 517 lKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
|++.||++++ +.+.|+|||.+....
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeCC
Confidence 9999999974 679999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.7e-09 Score=107.34 Aligned_cols=145 Identities=13% Similarity=0.132 Sum_probs=110.4
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC--cccceeeEEecCCC-CceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK--NFVNLIGYCEDDEP-FNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~~~~~~~-~~~~lV~ 465 (680)
+.++.|..+.||+++..+|..+++|........ .....+..|++++..+++. ++.++++++..... ...++||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~----~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL----PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC----cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 467899999999999887788999986543211 1234678999999999764 45667777765320 1348999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL------------------------------------- 508 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~------------------------------------- 508 (680)
||++++++.+.+.. ..++..++..++.+++++|++||+..
T Consensus 80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 99999888876531 35788889999999999999999531
Q ss_pred ----------------CCCeeecCCCCCCeeecC--CCCeEEcccccccc
Q 005734 509 ----------------NPPVAHSNLSSHCIYLTD--DYAAKVAEICFTTI 540 (680)
Q Consensus 509 ----------------~~~ivHrDlKp~NILld~--~~~~ki~DFGla~~ 540 (680)
...++|+|+++.||+++. +..+.|.||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 56689999987764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.1e-09 Score=114.75 Aligned_cols=220 Identities=14% Similarity=0.137 Sum_probs=142.2
Q ss_pred eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCC
Q 005734 404 LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMD 483 (680)
Q Consensus 404 ~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~ 483 (680)
..++.+|.|.+.+.... .......+.++.|+.+|||||++++......+ ..|||+|-+. .|..++....
T Consensus 34 k~~~~~vsVF~~~~~~~-----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~--~~ylvTErV~--Pl~~~lk~l~-- 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG-----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG--TLYLVTERVR--PLETVLKELG-- 102 (690)
T ss_pred eccCCceEEEEEeCCCc-----hhhHHHHHHHHHhhhccCchhhhhhhhhcccC--ceEEEeeccc--cHHHHHHHhH--
Confidence 34788888887765442 12234567788899999999999999988777 6799999984 5666665322
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc---cccccCCCCCCC
Q 005734 484 HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS---DDIENSVLPPLA 560 (680)
Q Consensus 484 ~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~---~~~~~~~~~~~~ 560 (680)
-....-.+.||+.||.|||++| .++|++|.-.-|+++..|+-||++|-++.......... .....+..|...
T Consensus 103 ---~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 103 ---KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEI 177 (690)
T ss_pred ---HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhc
Confidence 3334445789999999999887 99999999999999999999999998876543222100 001111122222
Q ss_pred CCC---CCeeehhHHHHHHHhCCCCCCc------cccccHHHH-HHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHH
Q 005734 561 DPE---TNIYSFGILMLEIISGKLPYCE------EKELSIEKW-AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKE 630 (680)
Q Consensus 561 s~~---sDVySfGvvllElltG~~p~~~------~~~~~~~~~-~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~ 630 (680)
.+. .|.|-||++++|++.|..+-.. ..+...... ......... . .+. .++++..
T Consensus 178 ~~s~~s~D~~~Lg~li~el~ng~~~~~~~~~~~~~ipk~~~~~~~k~~~~~~~-----~----------r~n-~~~~~~~ 241 (690)
T KOG1243|consen 178 DPSEWSIDSWGLGCLIEELFNGSLLTKTDLSNTGKIPKALIELYCKKLGATEL-----K----------RPN-KLRFILE 241 (690)
T ss_pred CccccchhhhhHHHHHHHHhCcccCcchhhhccCccchhHHHHHHHHhccccc-----c----------ccc-hhhHHHH
Confidence 222 4999999999999999433211 111011111 111111100 0 011 4566777
Q ss_pred ccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 631 CIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 631 C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
|....+-.|=.+-+++..|+++.-.
T Consensus 242 ~~~~~gff~n~fvd~~~fLeel~lk 266 (690)
T KOG1243|consen 242 CRLLGGFFRNDFVDTLLFLEELRLK 266 (690)
T ss_pred HHhccccccchHHHHHHHHHhcccC
Confidence 7777777777777777777776533
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1e-10 Score=124.48 Aligned_cols=134 Identities=22% Similarity=0.244 Sum_probs=68.8
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC-ccCccccCCCCCCcEEEc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS-GIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L 150 (680)
+++.|.|...+|. .+|.+++.|.+|++|.+++|++. .+-..++.|+.|+.+++..|++. .-||..+..|..|+.|||
T Consensus 33 ~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDL 110 (1255)
T KOG0444|consen 33 QMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDL 110 (1255)
T ss_pred heeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeec
Confidence 4444544444443 44555555555555555555554 33344555555555555555553 124555555555555555
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|+|++. +.|..+-+-.++-+|+|++|++. .||.. -+-++.-+..||+|.|.|....|
T Consensus 111 ShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~------------lfinLtDLLfLDLS~NrLe~LPP 167 (1255)
T KOG0444|consen 111 SHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNS------------LFINLTDLLFLDLSNNRLEMLPP 167 (1255)
T ss_pred chhhhh-hcchhhhhhcCcEEEEcccCccc-cCCch------------HHHhhHhHhhhccccchhhhcCH
Confidence 555555 45555555555555555555543 23321 12233444557777777766554
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.1e-10 Score=120.10 Aligned_cols=244 Identities=18% Similarity=0.135 Sum_probs=162.6
Q ss_pred HHHhhhhccccCC--CCCCeEEEEEe---CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEe
Q 005734 381 DTACEDFSNIIDT--QSGCTIYKGTL---SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCE 454 (680)
Q Consensus 381 ~~~~~~~~~~iG~--G~~g~Vyk~~~---~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~ 454 (680)
......+...+|. |.+|.||++.. .++..+|+|+-+...... .....=.+|+....+++ |+|.|+..-.+.
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p---~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPP---LDSKRKLREFLSHHKIDSHENPVRDSPAWE 188 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCc---cccccccchhhcccccCccccccccCcccc
Confidence 3344455678899 99999999987 468889998754443211 12223356777777775 999999777777
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCeeecCCCCCCeeecCC-CC
Q 005734 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAY----CLQYMHHELNPPVAHSNLSSHCIYLTDD-YA 529 (680)
Q Consensus 455 ~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~----gL~yLH~~~~~~ivHrDlKp~NILld~~-~~ 529 (680)
+.+ ..++-+|++ +.+|.++.+... ..++-...+.+..+..+ |+.++|+. .++|-|+||.||+..++ ..
T Consensus 189 ~~~--~lfiqtE~~-~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 189 GSG--ILFIQTELC-GESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred cCC--cceeeeccc-cchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccce
Confidence 776 568888888 578888876432 22444455556666666 99999998 99999999999999999 88
Q ss_pred eEEcccccccccCCCCCcccc------ccc--C----CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHH
Q 005734 530 AKVAEICFTTIALPKSKVSDD------IEN--S----VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAAD 597 (680)
Q Consensus 530 ~ki~DFGla~~~~~~~~~~~~------~~~--~----~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~ 597 (680)
.+..|||+............. ..+ | ...+.++..+|+|++|.+.+|..++...........+.+
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~---- 337 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ---- 337 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc----
Confidence 999999998877643211110 011 1 123456778999999999999999887654321111111
Q ss_pred HhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 598 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.....+. ++......++.....++++.+|-.|++.+++..
T Consensus 338 -------~r~~~ip~--e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 -------LRQGYIPL--EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -------cccccCch--hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 01111000 111111234445788999999999999887654
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-09 Score=116.15 Aligned_cols=153 Identities=22% Similarity=0.247 Sum_probs=115.6
Q ss_pred CCCCccceeeeCC----------------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCC
Q 005734 58 STPCLWSGVRCLN----------------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKL 121 (680)
Q Consensus 58 ~~~c~w~gv~c~~----------------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 121 (680)
+++|.-.-.-|+. ...+.|++++|.|+.+-+..|.++++|+.++|.+|.++ .||.......+|
T Consensus 49 ~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl 127 (873)
T KOG4194|consen 49 TCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHL 127 (873)
T ss_pred cCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccce
Confidence 4677777777753 24567999999999887888899999999999999998 788766666779
Q ss_pred CEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCC-hhhcCCCCCCeeeccCcccccccCCccccccccCCccccc
Q 005734 122 ELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP-LELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKI 200 (680)
Q Consensus 122 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P-~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~ 200 (680)
+.|+|.+|.++..--.++..++.|+.||||.|.++ .+| ..|..=.++++|+|++|.++..-- ..|
T Consensus 128 ~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~-------------~~F 193 (873)
T KOG4194|consen 128 EKLDLRHNLISSVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLET-------------GHF 193 (873)
T ss_pred eEEeeeccccccccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeecccccccccc-------------ccc
Confidence 99999999998666677888999999999999998 455 346665789999999998764211 244
Q ss_pred CCCCCCcccCCCCCCCCCCcchhhh
Q 005734 201 GEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 201 ~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
..++++..+-++.|.++...+..|.
T Consensus 194 ~~lnsL~tlkLsrNrittLp~r~Fk 218 (873)
T KOG4194|consen 194 DSLNSLLTLKLSRNRITTLPQRSFK 218 (873)
T ss_pred cccchheeeecccCcccccCHHHhh
Confidence 5555566666677777666665554
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.1e-11 Score=119.59 Aligned_cols=131 Identities=28% Similarity=0.349 Sum_probs=89.7
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
++..+++.+|.+.. +|++.-+++.|++||.-.|.+. .+|+.++.+.+|.-|||..|++. .+| +|..|..|..|+++
T Consensus 161 ~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g 236 (565)
T KOG0472|consen 161 KLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVG 236 (565)
T ss_pred HHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhc
Confidence 46677778887773 4444444777778887777776 67777777888888888888777 666 67777777777777
Q ss_pred CCcccccCChhhc-CCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 152 NNKFEGSIPLELS-RFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 152 ~N~l~g~~P~~l~-~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
.|+++ .+|++.+ ++++|.+|||.+|++.. +|.. +-.+.++..+|+|.|.+++..+
T Consensus 237 ~N~i~-~lpae~~~~L~~l~vLDLRdNklke-~Pde-------------~clLrsL~rLDlSNN~is~Lp~ 292 (565)
T KOG0472|consen 237 ENQIE-MLPAEHLKHLNSLLVLDLRDNKLKE-VPDE-------------ICLLRSLERLDLSNNDISSLPY 292 (565)
T ss_pred ccHHH-hhHHHHhcccccceeeecccccccc-CchH-------------HHHhhhhhhhcccCCccccCCc
Confidence 77777 5676654 77777777777777763 4432 2223445556777777766544
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.2e-09 Score=114.62 Aligned_cols=240 Identities=15% Similarity=0.112 Sum_probs=160.4
Q ss_pred hhhc--cccCCCCCCeEEEEEeC--CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCC
Q 005734 385 EDFS--NIIDTQSGCTIYKGTLS--SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 385 ~~~~--~~iG~G~~g~Vyk~~~~--~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 459 (680)
.+|+ ..||.|.|+.||+...+ ++..+++|-+....... .....-..|+.+...+ .|.++++....+...+
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~---~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r-- 339 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF---ASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR-- 339 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch---HhhhcchhhhhHhhHhhcccccCCCCCCccccc--
Confidence 3455 78999999999998754 56678887665443221 2222344666666666 4888888765555444
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEcccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFT 538 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla 538 (680)
..++--|||+++++.... .-...++...++++..+++.++.++|+. .++|+|+||+||++..+ +.-+++|||..
T Consensus 340 ~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 457899999999887665 3334677888999999999999999987 99999999999999876 88899999998
Q ss_pred cccCCCCCccc----c---cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 539 TIALPKSKVSD----D---IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 539 ~~~~~~~~~~~----~---~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
+.+.-...... . .+..........+.|+||||.-+.|.+|+..--... ..|... +. .
T Consensus 415 t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-----~~~~~i--~~---------~ 478 (524)
T KOG0601|consen 415 TRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-----VQSLTI--RS---------G 478 (524)
T ss_pred cccceecccccccccccccchhhccccccccccccccccccccccccCcccCccc-----ccceee--ec---------c
Confidence 75331111111 0 111112234467899999999999999987432211 111100 00 0
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
.....+. ...++..++.....+++..||.+.+.....+.
T Consensus 479 ~~p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 479 DTPNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred cccCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 0001111 11566677888889999999998887665443
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.5e-08 Score=114.94 Aligned_cols=123 Identities=19% Similarity=0.292 Sum_probs=93.1
Q ss_pred eCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcE
Q 005734 68 CLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKR 147 (680)
Q Consensus 68 c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 147 (680)
|...+.+.|++++++++ .+|..+. +.|+.|+|++|+|+ .+|..+. .+|+.|+|++|+|+ .+|..+. .+|+.
T Consensus 175 Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~ 245 (754)
T PRK15370 175 CLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQE 245 (754)
T ss_pred hcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccE
Confidence 33456789999999988 4676553 57999999999998 5777654 58999999999998 6787654 47999
Q ss_pred EEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 148 LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 148 L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
|+|++|++. .+|..+. ++|+.|++++|+++. +|.. +. ..+..|++++|+|++
T Consensus 246 L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~-------------l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 246 MELSINRIT-ELPERLP--SALQSLDLFHNKISC-LPEN-------------LP--EELRYLSVYDNSIRT 297 (754)
T ss_pred EECcCCccC-cCChhHh--CCCCEEECcCCccCc-cccc-------------cC--CCCcEEECCCCcccc
Confidence 999999998 7887765 579999999998884 5541 10 235556677777765
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.8e-08 Score=94.37 Aligned_cols=130 Identities=16% Similarity=0.193 Sum_probs=83.4
Q ss_pred eEEEEEeCCCCEEEEEEeeeccch---------------------hhHHHHHHHHHHHHHHHHcCCCC--cccceeeEEe
Q 005734 398 TIYKGTLSSGVEIAVAATAITSSK---------------------DWLKSQEMAYRKQVDTLSRINHK--NFVNLIGYCE 454 (680)
Q Consensus 398 ~Vyk~~~~~g~~vaVK~~~~~~~~---------------------~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~~~ 454 (680)
.||.|.-++|..+|||.-...... .+.........+|.+.|.++..- ++.+.+.+-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389999999999999977653211 11122345678899999999766 455555442
Q ss_pred cCCCCceEEEEEecC--CCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeeecCCCCCCeeecCCCCeE
Q 005734 455 DDEPFNRMMVFEYAP--NGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM-HHELNPPVAHSNLSSHCIYLTDDYAAK 531 (680)
Q Consensus 455 ~~~~~~~~lV~ey~~--~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yL-H~~~~~~ivHrDlKp~NILld~~~~~k 531 (680)
. .+|||||++ +..+..+.. .. ++......++.++...+..+ |.. +|+|||+.+.||+++++ .+.
T Consensus 80 -~----~~ivME~I~~~G~~~~~l~~-~~---~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 80 -R----NVIVMEYIGEDGVPLPRLKD-VD---LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp -T----TEEEEE--EETTEEGGCHHH-CG---GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred -C----CEEEEEecCCCccchhhHHh-cc---ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 2 389999998 544443332 11 11234566777888866665 565 99999999999999988 899
Q ss_pred Eccccccccc
Q 005734 532 VAEICFTTIA 541 (680)
Q Consensus 532 i~DFGla~~~ 541 (680)
|+|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999987654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.1e-08 Score=115.57 Aligned_cols=99 Identities=23% Similarity=0.381 Sum_probs=82.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|+|++|.++ .+|..+. ++|+.|++++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. .+|+.|+|
T Consensus 199 ~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 199 EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 46899999999998 5676554 58999999999998 5777654 47999999999998 7887764 58999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
++|+++ .+|..+. ++|+.|++++|++++
T Consensus 270 s~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 270 FHNKIS-CLPENLP--EELRYLSVYDNSIRT 297 (754)
T ss_pred cCCccC-ccccccC--CCCcEEECCCCcccc
Confidence 999998 5787664 589999999998885
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-09 Score=111.37 Aligned_cols=128 Identities=23% Similarity=0.348 Sum_probs=105.6
Q ss_pred EeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccC
Q 005734 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152 (680)
Q Consensus 73 l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 152 (680)
++.+.+++|.++ .+|..++.+++|+.|+|++|.+. .+|..++.+..|+.||||.|+|. .+|..+..+.-|+.+-.++
T Consensus 414 vT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~ 490 (565)
T KOG0472|consen 414 VTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASN 490 (565)
T ss_pred HHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcc
Confidence 455667777665 77888999999999999999998 79999999999999999999998 8898887777788887788
Q ss_pred CcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 153 NKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 153 N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
|++...-|+.+.+|.+|..|||.+|-+....| .++++.++.++++++|++.
T Consensus 491 nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp--------------~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 491 NQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPP--------------ILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccccccChHHhhhhhhcceeccCCCchhhCCh--------------hhccccceeEEEecCCccC
Confidence 88885445558899999999998887764333 4678888888999999887
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.2e-08 Score=112.48 Aligned_cols=128 Identities=21% Similarity=0.215 Sum_probs=64.5
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+++.|++++|+|+. +|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.++ .+|.. ..+|+.|+++
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls 290 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWIF 290 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhc---hhhcCEEECc
Confidence 34455555555442 332 1344555555555555 23432 234455555555554 33332 2345666677
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCcccc-------ccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV-------NRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
+|+++ .+|.. +++|+.|++++|++++ +|..... ++.+..++. ....++.|++++|+|++.
T Consensus 291 ~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~---lp~~Lq~LdLS~N~Ls~L 357 (788)
T PRK15387 291 GNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPT---LPSGLQELSVSDNQLASL 357 (788)
T ss_pred CCccc-ccccc---ccccceeECCCCcccc-CCCCcccccccccccCccccccc---cccccceEecCCCccCCC
Confidence 77666 35542 3678888888888876 3331110 111111110 113567788888888763
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.2e-08 Score=98.02 Aligned_cols=148 Identities=12% Similarity=0.099 Sum_probs=102.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHH------HHHHHHHHHHHHHcCCCCcc--cceeeEEecCC---
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKS------QEMAYRKQVDTLSRINHKNF--VNLIGYCEDDE--- 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~------~~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~~--- 457 (680)
+++-.-....|++..+ +|+.+.||......-....+. ....+.+|.+.+.++...+| .+.+++.....
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444455778776 577899997643321110010 11147889999988854444 44566664321
Q ss_pred CCceEEEEEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-------CCC
Q 005734 458 PFNRMMVFEYAPNG-TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-------DYA 529 (680)
Q Consensus 458 ~~~~~lV~ey~~~G-sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-------~~~ 529 (680)
....+||+|++++- +|.+++........+...+..++.+++..++-||.. +|+|+|++++|||++. ++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCce
Confidence 12468999999876 798887532223455667788999999999999999 9999999999999975 467
Q ss_pred eEEcccccccc
Q 005734 530 AKVAEICFTTI 540 (680)
Q Consensus 530 ~ki~DFGla~~ 540 (680)
+.++||+.+..
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 89999998754
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.8e-08 Score=115.43 Aligned_cols=96 Identities=25% Similarity=0.290 Sum_probs=53.2
Q ss_pred EeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCc---ccCC--------------CCCCCEEEccCCcCCccC
Q 005734 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPK---ELGE--------------LTKLELLDLSNNKLSGII 135 (680)
Q Consensus 73 l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~---~~~~--------------l~~L~~L~Ls~N~l~g~~ 135 (680)
++.|+|++|.++ .+|. .+++|+.|+|++|+|++ +|. .+.. ..+|+.|+|++|+|+ .+
T Consensus 284 L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls-~L 357 (788)
T PRK15387 284 LCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA-SL 357 (788)
T ss_pred cCEEECcCCccc-cccc---cccccceeECCCCcccc-CCCCcccccccccccCccccccccccccceEecCCCccC-CC
Confidence 444555555554 2332 13556666666666654 222 1111 136788888888887 46
Q ss_pred ccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 136 PVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 136 p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
|... .+|+.|++++|+++ .+|.. .++|+.|++++|.+++
T Consensus 358 P~lp---~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~ 396 (788)
T PRK15387 358 PTLP---SELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS 396 (788)
T ss_pred CCCC---cccceehhhccccc-cCccc---ccccceEEecCCcccC
Confidence 6432 35566666666666 35542 2456667777766664
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.2e-09 Score=121.87 Aligned_cols=128 Identities=27% Similarity=0.320 Sum_probs=108.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..|+.|.+.+|.|+...-+-+-+..+|+.|+|++|+|. .+| ..+.++..|+.|+||+|+|+ .+|..+.++..|++|.
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ 436 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLR 436 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHh
Confidence 36788999999999887778899999999999999998 566 45788999999999999999 8999999999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccc-cCCccccccccCCcccccCCCCCCcccCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE-VAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANL 216 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l 216 (680)
..+|++. .+| .+..+++|+++|++.|+++-. +|. ... -.+++++|+++|.-
T Consensus 437 ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~-------------~~p-~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 437 AHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPE-------------ALP-SPNLKYLDLSGNTR 488 (1081)
T ss_pred hcCCcee-ech-hhhhcCcceEEecccchhhhhhhhh-------------hCC-CcccceeeccCCcc
Confidence 9999999 688 899999999999999988643 222 111 15678899998863
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.3e-08 Score=94.36 Aligned_cols=104 Identities=31% Similarity=0.451 Sum_probs=32.9
Q ss_pred cEeEEEcCCCCCcccCCcccC-CCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcccc-CCCCCCcEEE
Q 005734 72 KVQMLDMKERSLEGTLAPDLG-KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLL 149 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~ 149 (680)
+++.|+|.+|.++.. ..++ .+.+|+.|+|++|.|+. ++ .+..+++|+.|+|++|+++ .+...+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 456677777777632 2344 46677777777777763 33 4666777777777777777 454333 3567777777
Q ss_pred ccCCcccccC-ChhhcCCCCCCeeeccCcccc
Q 005734 150 LGNNKFEGSI-PLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 150 L~~N~l~g~~-P~~l~~l~~L~~L~l~~N~~~ 180 (680)
|++|++...- =..++.+++|++|+|.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 7777775311 134566777777777777554
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.7e-08 Score=78.12 Aligned_cols=59 Identities=42% Similarity=0.618 Sum_probs=32.7
Q ss_pred CCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCc
Q 005734 96 DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154 (680)
Q Consensus 96 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~ 154 (680)
+|++|++++|+|+...+..|..+++|++|++++|.++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555554444455555555555555554
|
... |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.63 E-value=2e-07 Score=114.32 Aligned_cols=104 Identities=25% Similarity=0.269 Sum_probs=48.9
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+++.|+|.++.+. .++..+..+++|+.|+|+++..-+.+|. ++.+++|+.|+|++|..-..+|..++++++|+.|+++
T Consensus 612 ~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~ 689 (1153)
T PLN03210 612 NLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMS 689 (1153)
T ss_pred CCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCC
Confidence 3444555544443 3344444455555555554433233442 4445555555555544334455555555555555555
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcc
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYL 178 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~ 178 (680)
+|..-+.+|..+ ++++|+.|++++|.
T Consensus 690 ~c~~L~~Lp~~i-~l~sL~~L~Lsgc~ 715 (1153)
T PLN03210 690 RCENLEILPTGI-NLKSLYRLNLSGCS 715 (1153)
T ss_pred CCCCcCccCCcC-CCCCCCEEeCCCCC
Confidence 443333444433 44455555554443
|
syringae 6; Provisional |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.4e-07 Score=94.98 Aligned_cols=170 Identities=15% Similarity=0.192 Sum_probs=125.9
Q ss_pred CCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC--CCCceEEEEEecCC-C
Q 005734 396 GCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD--EPFNRMMVFEYAPN-G 471 (680)
Q Consensus 396 ~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lV~ey~~~-G 471 (680)
..+.||+.. .||..+..|++...+.+... .-..-++.++++.|.|+|++...+... +....++||+|.|+ +
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n-----k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN-----KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc-----cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 358899986 48999999998544322211 123457889999999999998877521 11257899999985 5
Q ss_pred ChhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 472 TVFEHLHIK-------------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 472 sL~~~l~~~-------------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
+|.+.-... .+...+....+.++.|++.||.++|+. ++.-+-|.+++||++.+.+++|+..|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccce
Confidence 777764321 123467788999999999999999999 9999999999999999999999988877
Q ss_pred cccCCCCCcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCC
Q 005734 539 TIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLP 582 (680)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p 582 (680)
.....+. ..+-..-.+-|.=-||.+++.|.||..-
T Consensus 441 Dvl~~d~---------~~~le~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 441 DVLQEDP---------TEPLESQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred eeecCCC---------CcchhHHhhhhHHHHHHHHHHHhhcccc
Confidence 6654332 0111112456888999999999999643
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.8e-09 Score=114.52 Aligned_cols=164 Identities=23% Similarity=0.346 Sum_probs=91.9
Q ss_pred eEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCC
Q 005734 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153 (680)
Q Consensus 74 ~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 153 (680)
+..||+.|.+. .+|.+++.+-.|..|.|..|.|. .+|..+.++..|++|||+.|+++ .+|..++.|+ |+.|-+++|
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 44566666655 55555555666666666666665 55666666666666666666666 5666665554 666666666
Q ss_pred cccccCChhhcCCCCCCeeeccCcccccccCCcccc---------ccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 154 KFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV---------NRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 154 ~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
+++ .+|..++.+..|..||.+.|.+....+..... .+.+..++.++..+ .+..+|.|||+++. +|..|
T Consensus 154 kl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis~-iPv~f 230 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKISY-LPVDF 230 (722)
T ss_pred ccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCceee-cchhh
Confidence 665 56666665556666666666555433321111 01122223334422 35568999999874 44443
Q ss_pred hhhhhhhhhHHhhhhh-hcccccCCCCC
Q 005734 225 VQHSQNLINVARRKLL-EQSSNLAAEPA 251 (680)
Q Consensus 225 ~~~~~~~~~l~~~~l~-~~~n~l~~~~~ 251 (680)
.+|+.++.+ +.+|.|...+.
T Consensus 231 -------r~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 231 -------RKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred -------hhhhhheeeeeccCCCCCChH
Confidence 356666444 45565655543
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.9e-08 Score=76.13 Aligned_cols=61 Identities=39% Similarity=0.476 Sum_probs=55.1
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccc
Q 005734 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLT 179 (680)
Q Consensus 119 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~ 179 (680)
++|++|+|++|+++...+..|..+++|++|++++|.++..-|..|.++++|++|++++|.+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999966567889999999999999999977777899999999999999975
|
... |
| >PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape [] | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.7e-08 Score=68.78 Aligned_cols=41 Identities=49% Similarity=0.968 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHhCcCCCCCCCCCCCCCC-CCCCccceeeeC
Q 005734 29 NLEGMALLEFRTRVISDPFGVFSNWNKND-STPCLWSGVRCL 69 (680)
Q Consensus 29 ~~~~~~ll~~~~~~~~~~~~~l~~W~~~~-~~~c~w~gv~c~ 69 (680)
+.|+++|++||.++..+|.+.+.+|+... .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57899999999999766778899998764 799999999995
|
LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A. |
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.2e-07 Score=85.72 Aligned_cols=145 Identities=10% Similarity=0.077 Sum_probs=105.8
Q ss_pred CCCCCCeEEEEEeCCCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCC--cccceeeEEe---cCCCCceEEEE
Q 005734 392 DTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHK--NFVNLIGYCE---DDEPFNRMMVF 465 (680)
Q Consensus 392 G~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~--niv~l~g~~~---~~~~~~~~lV~ 465 (680)
|+||.+.|++-.+. |..+-+|+-.......+. +-....|.+|+..|.++... .+.+.+ ++. .+..+..+||+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 56888899998775 446788876533222222 33456799999999998533 344444 332 22233568999
Q ss_pred EecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--eEEccccccccc
Q 005734 466 EYAPN-GTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA--AKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~-GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~ki~DFGla~~~ 541 (680)
|-+++ -+|.+++......+.+...+..+..++++.++-||.. ++.|+|+-+.||+++.++. +++.||--++..
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 98863 4899888655444667888899999999999999999 9999999999999986666 899999766543
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.2e-08 Score=100.32 Aligned_cols=91 Identities=21% Similarity=0.217 Sum_probs=53.6
Q ss_pred ccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhc
Q 005734 85 GTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELS 164 (680)
Q Consensus 85 g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~ 164 (680)
|..-..+..+..|+.|||+.|.|+ .+..+..-++.++.|++|+|.+. .+- .+..|++|+.||||+|.++ ++-.+=.
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~ 349 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHL 349 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHh
Confidence 333334444556666666666666 55555666666666666666665 232 2566666666666666665 3444444
Q ss_pred CCCCCCeeeccCccc
Q 005734 165 RFTLLSELQFDDYLT 179 (680)
Q Consensus 165 ~l~~L~~L~l~~N~~ 179 (680)
.+-+++.|.|++|.+
T Consensus 350 KLGNIKtL~La~N~i 364 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKI 364 (490)
T ss_pred hhcCEeeeehhhhhH
Confidence 555666666666654
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.4e-08 Score=107.00 Aligned_cols=141 Identities=23% Similarity=0.218 Sum_probs=98.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCC---CCEEEccCccCcc----cCCcccCCC-CCCCEEEccCCcCCcc----Ccc
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSD---LRFLVLQKNHFSG----VIPKELGEL-TKLELLDLSNNKLSGI----IPV 137 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~---L~~L~L~~N~l~g----~~p~~~~~l-~~L~~L~Ls~N~l~g~----~p~ 137 (680)
..+++.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 358888899888887666665555555 8899998888873 233455666 8888999999988843 344
Q ss_pred ccCCCCCCcEEEccCCcccc----cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCC
Q 005734 138 EISRLPSLKRLLLGNNKFEG----SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSC 213 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g----~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 213 (680)
.+..+++|+.|++++|.+++ .++..+..+++|+.|++++|.+++..... +...+..+..+..++++.
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~---------l~~~~~~~~~L~~L~ls~ 230 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASA---------LAETLASLKSLEVLNLGD 230 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHH---------HHHHhcccCCCCEEecCC
Confidence 56677788899998888874 24445666678899999888876432210 111234456677788888
Q ss_pred CCCCCC
Q 005734 214 ANLPGS 219 (680)
Q Consensus 214 n~l~~~ 219 (680)
|++++.
T Consensus 231 n~l~~~ 236 (319)
T cd00116 231 NNLTDA 236 (319)
T ss_pred CcCchH
Confidence 887753
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.2e-07 Score=100.01 Aligned_cols=149 Identities=15% Similarity=0.200 Sum_probs=101.1
Q ss_pred hhhc-cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHH-----------------------------------HHH
Q 005734 385 EDFS-NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLK-----------------------------------SQE 428 (680)
Q Consensus 385 ~~~~-~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~-----------------------------------~~~ 428 (680)
.+|+ +-|+.++-|.||+|++++|+.||||+......+.... ..+
T Consensus 126 ~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E 205 (517)
T COG0661 126 SEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE 205 (517)
T ss_pred HHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence 3565 8899999999999999999999999987653221110 012
Q ss_pred HHHHHHHHHHHcCC-----CCcccceeeEEec-CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHH-H
Q 005734 429 MAYRKQVDTLSRIN-----HKNFVNLIGYCED-DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYC-L 501 (680)
Q Consensus 429 ~~f~~E~~~l~~l~-----H~niv~l~g~~~~-~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~g-L 501 (680)
-+|.+|..-+.+++ .+++ ++=..+++ .. ...|+|||++|-.+.+...-+. ..++ +..|+..++++ +
T Consensus 206 lDy~~EA~n~~~~~~nf~~~~~v-~VP~V~we~t~--~~VLtmE~i~Gi~i~d~~~l~~-~g~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 206 LDYRREAANAERFRENFKDDPDV-YVPKVYWEYTT--RRVLTMEWIDGIKISDIAALKS-AGID---RKELAELLVRAFL 278 (517)
T ss_pred hCHHHHHHHHHHHHHHcCCCCCe-EeceeehhccC--CcEEEEEeeCCEecccHHHHHh-cCCC---HHHHHHHHHHHHH
Confidence 24666666666552 3332 22233332 12 4689999999988888853222 3344 45566655554 2
Q ss_pred HHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 502 QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 502 ~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
..+-.+ +++|+|..|.||+++.++..-+-|||+.....+
T Consensus 279 ~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 RQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 233334 899999999999999999999999999877653
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.1e-09 Score=111.86 Aligned_cols=128 Identities=26% Similarity=0.390 Sum_probs=73.3
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+..|..||.|.|.+. .+|..++++.+|+.|++.
T Consensus 122 ~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vr 197 (722)
T KOG0532|consen 122 ALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVR 197 (722)
T ss_pred HHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHh
Confidence 3445555555554 4444444444 555555555554 45555555555555555555555 455555555555555555
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
.|++. .+|.+++.| .|..||++.|+++ .++..|-.++.++++.+.+|.|...
T Consensus 198 Rn~l~-~lp~El~~L-pLi~lDfScNkis--------------~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 198 RNHLE-DLPEELCSL-PLIRLDFSCNKIS--------------YLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred hhhhh-hCCHHHhCC-ceeeeecccCcee--------------ecchhhhhhhhheeeeeccCCCCCC
Confidence 55555 355555533 2555555555544 3445677888899999999999753
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.3e-08 Score=90.96 Aligned_cols=112 Identities=30% Similarity=0.323 Sum_probs=41.6
Q ss_pred ccCCCCCCCEEEccCccCcccCCcccC-CCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhh-cCCC
Q 005734 90 DLGKLSDLRFLVLQKNHFSGVIPKELG-ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLEL-SRFT 167 (680)
Q Consensus 90 ~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l-~~l~ 167 (680)
.+.+..+++.|+|++|.|+ .+ ..++ .+.+|+.||||+|.++ .++ .+..++.|+.|++++|.++ .++..+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-T
T ss_pred ccccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 3566678999999999998 34 3566 5899999999999999 565 5888999999999999999 466555 4689
Q ss_pred CCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 168 LLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 168 ~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
+|+.|++++|++... .. ...+..+..+..+++.+|.++.
T Consensus 89 ~L~~L~L~~N~I~~l-----------~~-l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 89 NLQELYLSNNKISDL-----------NE-LEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp T--EEE-TTS---SC-----------CC-CGGGGG-TT--EEE-TT-GGGG
T ss_pred cCCEEECcCCcCCCh-----------HH-hHHHHcCCCcceeeccCCcccc
Confidence 999999999988641 11 1345566777888888887753
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.6e-08 Score=106.42 Aligned_cols=142 Identities=22% Similarity=0.221 Sum_probs=91.6
Q ss_pred CcEeEEEcCCCCCcc------cCCcccCCCCCCCEEEccCccCcccCCcccCCCCC---CCEEEccCCcCCc----cCcc
Q 005734 71 GKVQMLDMKERSLEG------TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTK---LELLDLSNNKLSG----IIPV 137 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g------~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~---L~~L~Ls~N~l~g----~~p~ 137 (680)
..++.++++++.+.+ .++..+..+++|+.|++++|.+.+..+..+..+.+ |+.|++++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 346777777776652 23445667778888888888887666666655555 8888888888873 2334
Q ss_pred ccCCC-CCCcEEEccCCccccc----CChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCC
Q 005734 138 EISRL-PSLKRLLLGNNKFEGS----IPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHS 212 (680)
Q Consensus 138 ~~~~l-~~L~~L~L~~N~l~g~----~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s 212 (680)
.+..+ ++|+.|++++|.+++. ++..+..+++|+.|++++|.+++.... .+...+.....++.++++
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~---------~l~~~l~~~~~L~~L~L~ 201 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIR---------ALAEGLKANCNLEVLDLN 201 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHH---------HHHHHHHhCCCCCEEecc
Confidence 45566 7888888888888742 344566677788888888877652111 001122333566778888
Q ss_pred CCCCCCCcc
Q 005734 213 CANLPGSSE 221 (680)
Q Consensus 213 ~n~l~~~~~ 221 (680)
.|.+++...
T Consensus 202 ~n~i~~~~~ 210 (319)
T cd00116 202 NNGLTDEGA 210 (319)
T ss_pred CCccChHHH
Confidence 887765443
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.48 E-value=8.3e-07 Score=87.60 Aligned_cols=137 Identities=18% Similarity=0.247 Sum_probs=92.9
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccch-----------------hhHHHHHHHHHHHHHHHHcCCCC--cc
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSK-----------------DWLKSQEMAYRKQVDTLSRINHK--NF 446 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~-----------------~~~~~~~~~f~~E~~~l~~l~H~--ni 446 (680)
.+++.||-|--+.||.|..+.|.++|||--...... .|.-.......+|.++|.++.-. .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 346899999999999999999999999854433211 01112344678899999998654 56
Q ss_pred cceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 005734 447 VNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526 (680)
Q Consensus 447 v~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 526 (680)
.+.+++- ...+||||+++-.|...- ++-..--.|+..|.+-+.-.-.. +|||||+.+-||++++
T Consensus 174 P~P~~~n------RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 174 PKPIAWN------RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCccccc------cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 6665542 348999999885554331 11112223333333333333344 8999999999999999
Q ss_pred CCCeEEcccccc
Q 005734 527 DYAAKVAEICFT 538 (680)
Q Consensus 527 ~~~~ki~DFGla 538 (680)
|+.+.++||--+
T Consensus 238 dg~~~vIDwPQ~ 249 (304)
T COG0478 238 DGDIVVIDWPQA 249 (304)
T ss_pred CCCEEEEeCccc
Confidence 999999999543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.47 E-value=2e-06 Score=84.57 Aligned_cols=108 Identities=16% Similarity=0.225 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHcCCCC--cccceeeEEecCCC--CceEEEEEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 005734 429 MAYRKQVDTLSRINHK--NFVNLIGYCEDDEP--FNRMMVFEYAPNG-TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQY 503 (680)
Q Consensus 429 ~~f~~E~~~l~~l~H~--niv~l~g~~~~~~~--~~~~lV~ey~~~G-sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~y 503 (680)
..+.+|...+.+++.. ...+.+++...... ...+||+|++++- +|.+++.... ..+-..+..++.++++.++-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHHH
Confidence 3577888888887533 45667777665321 2458999999874 7999886422 25666788999999999999
Q ss_pred HhcCCCCCeeecCCCCCCeeecCCC---CeEEccccccccc
Q 005734 504 MHHELNPPVAHSNLSSHCIYLTDDY---AAKVAEICFTTIA 541 (680)
Q Consensus 504 LH~~~~~~ivHrDlKp~NILld~~~---~~ki~DFGla~~~ 541 (680)
||.. +|+|+|+++.|||++.+. .+.++||+-++..
T Consensus 134 lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999 999999999999998876 8999999987764
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.4e-08 Score=101.86 Aligned_cols=109 Identities=26% Similarity=0.271 Sum_probs=96.6
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccC-CcCCccCccccCCCCCCcEEEc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN-NKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..+.|+|..|+|+...|..|..+.+|++|||++|+|+-+-|.+|.++++|..|-+-+ |+|+...-..|++|.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 468899999999977777999999999999999999988899999999998776554 9999544467899999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
.-|++.-.....|..+++|..|.+.+|.+.
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q 177 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQ 177 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhh
Confidence 999999877888999999999999999875
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.41 E-value=4e-08 Score=110.03 Aligned_cols=104 Identities=28% Similarity=0.420 Sum_probs=91.3
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.|.......+.+|..|+.|+||+|+++ .+|..+..+..|++|...+|++. ..| ++..+++|+.+|+
T Consensus 383 ~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDl 459 (1081)
T KOG0618|consen 383 KHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDL 459 (1081)
T ss_pred cceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEec
Confidence 57999999999998444457899999999999999999 79999999999999999999999 788 8999999999999
Q ss_pred cCCcccc-cCChhhcCCCCCCeeeccCcc
Q 005734 151 GNNKFEG-SIPLELSRFTLLSELQFDDYL 178 (680)
Q Consensus 151 ~~N~l~g-~~P~~l~~l~~L~~L~l~~N~ 178 (680)
+.|+++- .+|..... ++|++|||++|.
T Consensus 460 S~N~L~~~~l~~~~p~-p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 460 SCNNLSEVTLPEALPS-PNLKYLDLSGNT 487 (1081)
T ss_pred ccchhhhhhhhhhCCC-cccceeeccCCc
Confidence 9999973 44543332 899999999995
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.8e-06 Score=105.99 Aligned_cols=110 Identities=19% Similarity=0.238 Sum_probs=86.2
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.|++.++.+. .+|..+ .+.+|+.|+|++|.+. .+|..+..+++|+.|+|++|...+.+|. ++.+++|+.|+|+
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~ 665 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLS 665 (1153)
T ss_pred ccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEec
Confidence 4566666666554 556655 4678889999998887 6788888899999999988765557774 7888999999999
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
+|.....+|..++++++|+.|++++|.....+|.
T Consensus 666 ~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~ 699 (1153)
T PLN03210 666 DCSSLVELPSSIQYLNKLEDLDMSRCENLEILPT 699 (1153)
T ss_pred CCCCccccchhhhccCCCCEEeCCCCCCcCccCC
Confidence 8877778999999999999999998766666665
|
syringae 6; Provisional |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.5e-06 Score=92.52 Aligned_cols=163 Identities=14% Similarity=0.165 Sum_probs=105.4
Q ss_pred cCCCCCCHHHHHHHh------------hhhc-cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhH------------
Q 005734 370 TGVPKLNRLELDTAC------------EDFS-NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL------------ 424 (680)
Q Consensus 370 ~~~~~~~~~~l~~~~------------~~~~-~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~------------ 424 (680)
...|.++++|+...- ..|+ +-||.-+.|.||+|++++|+.||||+-+....+...
T Consensus 135 D~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~ 214 (538)
T KOG1235|consen 135 DQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKV 214 (538)
T ss_pred ccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHH
Confidence 345667776654332 2344 789999999999999999999999988765422211
Q ss_pred --------------HH------HHHHHHHHHHHHHcC----CCCc------ccceeeEEecCCCCceEEEEEecCCCChh
Q 005734 425 --------------KS------QEMAYRKQVDTLSRI----NHKN------FVNLIGYCEDDEPFNRMMVFEYAPNGTVF 474 (680)
Q Consensus 425 --------------~~------~~~~f~~E~~~l~~l----~H~n------iv~l~g~~~~~~~~~~~lV~ey~~~GsL~ 474 (680)
.+ ++-+|.+|.+-..++ +|-+ |.+++-.+.. .+.|+||||+|..+.
T Consensus 215 l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st----~RVLtME~~~G~~i~ 290 (538)
T KOG1235|consen 215 LQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLST----KRVLTMEYVDGIKIN 290 (538)
T ss_pred HHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCc----ceEEEEEecCCccCC
Confidence 00 112466666555544 4555 3333333322 469999999998887
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----CCCeEEcccccccccC
Q 005734 475 EHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD----DYAAKVAEICFTTIAL 542 (680)
Q Consensus 475 ~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~----~~~~ki~DFGla~~~~ 542 (680)
+.-.-.. ..++-. .|+..+.++ |++.-...+++|+|=.|-||+++. ++++.+-|||+.....
T Consensus 291 Dl~~i~~-~gi~~~---~i~~~l~~~--~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 291 DLDAIDK-RGISPH---DILNKLVEA--YLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred CHHHHHH-cCCCHH---HHHHHHHHH--HHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 7643221 234443 444444443 333333338999999999999983 6789999999987654
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.3e-07 Score=93.13 Aligned_cols=71 Identities=25% Similarity=0.398 Sum_probs=54.6
Q ss_pred cccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 108 SGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 108 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
+|..-..+.-...|+.||||+|.++ .+..+..-+++++.|++|+|.+. .+- .++.+++|+.|||++|.++.
T Consensus 273 ~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls~ 343 (490)
T KOG1259|consen 273 NGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLAE 343 (490)
T ss_pred CCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhHh
Confidence 4444444555677888999999988 78888888889999999999887 233 37888889999999887763
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.8e-07 Score=97.22 Aligned_cols=84 Identities=36% Similarity=0.523 Sum_probs=40.0
Q ss_pred CCCCCEEEccCccCcccCCcccCCCC-CCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCee
Q 005734 94 LSDLRFLVLQKNHFSGVIPKELGELT-KLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172 (680)
Q Consensus 94 l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L 172 (680)
++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 344455555555544 3444444442 4555555555554 44444444555555555555554 344433344445555
Q ss_pred eccCcccc
Q 005734 173 QFDDYLTS 180 (680)
Q Consensus 173 ~l~~N~~~ 180 (680)
++++|+++
T Consensus 192 ~ls~N~i~ 199 (394)
T COG4886 192 DLSGNKIS 199 (394)
T ss_pred eccCCccc
Confidence 55555443
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.5e-06 Score=81.12 Aligned_cols=103 Identities=18% Similarity=0.269 Sum_probs=81.5
Q ss_pred HHHHHHHcCCC-CcccceeeEEecCCCCceEEEEEecCCCChhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 005734 433 KQVDTLSRINH-KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHI-KEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510 (680)
Q Consensus 433 ~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~-~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~ 510 (680)
.|.-++..+++ +++.+++|+|- .++|.||...+++...-.. ..-..-+|..|.+||.++.+.+.++++....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG------~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG------RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC------CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57778888876 59999999992 3789999987766432100 0112468999999999999999999986555
Q ss_pred CeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 511 ~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
.+.-+|++++|+-+++++++|+.|...+...
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 6888999999999999999999998766543
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.5e-06 Score=94.56 Aligned_cols=147 Identities=28% Similarity=0.386 Sum_probs=112.8
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCC-CCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLS-DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..++.|++.+|.++ .+++..+.+. +|+.|++++|.+. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 46899999999998 6677777775 9999999999998 67788999999999999999999 7888777899999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCcccc---------ccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV---------NRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
+++|+++ .+|..+.....|+.|.+++|...-.+...... ...+......++.+..+..+++++|.++...
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~ 271 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSIS 271 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeeccchhccccccceeccccccccccc
Confidence 9999999 78988777788999999999532222211100 0111111234556666788888988887654
Q ss_pred c
Q 005734 221 E 221 (680)
Q Consensus 221 ~ 221 (680)
.
T Consensus 272 ~ 272 (394)
T COG4886 272 S 272 (394)
T ss_pred c
Confidence 4
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.3e-05 Score=76.11 Aligned_cols=139 Identities=6% Similarity=0.018 Sum_probs=81.1
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc--ccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN--FVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lV~e 466 (680)
..||+|..+.||+. .|..+++|...... ...+..+|.+++..+..-. +.+.++++...+ ...+|||
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~--~~glv~e 74 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGG--RLGLIYE 74 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC-------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCC--eeeeeee
Confidence 57899999999984 24456677654322 1223577888888886443 356677776655 4578999
Q ss_pred ecCCCC-hhhhh---------------------ccCCCCCCCHHHHHHHH-H----------HH-HHHHHHHhcC-CCCC
Q 005734 467 YAPNGT-VFEHL---------------------HIKEMDHLDWNARMRII-M----------GT-AYCLQYMHHE-LNPP 511 (680)
Q Consensus 467 y~~~Gs-L~~~l---------------------~~~~~~~l~~~~rl~ia-~----------~i-a~gL~yLH~~-~~~~ 511 (680)
+++|.+ +...+ |.-.....+...+..-. . .+ .....+|... ..+.
T Consensus 75 ~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 75 LIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred ecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 998853 22111 11100111111111100 0 00 1112223211 2346
Q ss_pred eeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 512 VAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 512 ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
++|+|+.|.||++++++ ..|.||+.+..
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 78999999999999888 99999987653
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.1e-06 Score=94.46 Aligned_cols=139 Identities=19% Similarity=0.281 Sum_probs=92.7
Q ss_pred HHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc-----------------cccccCCCCC
Q 005734 496 GTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----------------DDIENSVLPP 558 (680)
Q Consensus 496 ~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~-----------------~~~~~~~~~~ 558 (680)
+++.|+.|+|.. +.+||++|.|++|.++.++..||+.|+.+....+...+. ...+|+....
T Consensus 107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 345999999976 489999999999999999999999998776554321111 1123444445
Q ss_pred CCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCC
Q 005734 559 LADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLR 637 (680)
Q Consensus 559 ~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~ 637 (680)
-.++++|+||+||+++.+.. |+.-+.... ..+........ .+.....+..+.+.++.+=+.+.+..++.
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~-~~~~~~~~~~~---------~~~~~~~~s~~~p~el~~~l~k~l~~~~~ 254 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANG-GLLSYSFSRNL---------LNAGAFGYSNNLPSELRESLKKLLNGDSA 254 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccC-Ccchhhhhhcc---------cccccccccccCcHHHHHHHHHHhcCCcc
Confidence 56888999999999999995 554443322 11111111111 11111123344557888888999999999
Q ss_pred CCCCHHHHH
Q 005734 638 QRPTMNDII 646 (680)
Q Consensus 638 ~RPtm~ev~ 646 (680)
.||++.++.
T Consensus 255 ~rp~~~~l~ 263 (700)
T KOG2137|consen 255 VRPTLDLLL 263 (700)
T ss_pred cCcchhhhh
Confidence 999877665
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.7e-06 Score=88.67 Aligned_cols=90 Identities=26% Similarity=0.236 Sum_probs=68.8
Q ss_pred ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCC
Q 005734 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLL 169 (680)
Q Consensus 90 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L 169 (680)
.|..|++|+.|+|++|+|++.-+.+|..+..++.|+|..|++...--..|.++..|+.|+|.+|+++-.-|..|..+.+|
T Consensus 269 cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l 348 (498)
T KOG4237|consen 269 CFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSL 348 (498)
T ss_pred HHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccccee
Confidence 46778888888888888887777788888888888888888774444567777888888888888877777777777778
Q ss_pred CeeeccCccc
Q 005734 170 SELQFDDYLT 179 (680)
Q Consensus 170 ~~L~l~~N~~ 179 (680)
..|+|-.|.+
T Consensus 349 ~~l~l~~Np~ 358 (498)
T KOG4237|consen 349 STLNLLSNPF 358 (498)
T ss_pred eeeehccCcc
Confidence 7777776654
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00013 Score=71.55 Aligned_cols=140 Identities=17% Similarity=0.158 Sum_probs=90.1
Q ss_pred ccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhH-------------------HHHHHHHHHHHHHHHcCC--CCcccc
Q 005734 390 IIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL-------------------KSQEMAYRKQVDTLSRIN--HKNFVN 448 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~-------------------~~~~~~f~~E~~~l~~l~--H~niv~ 448 (680)
.|++|--..||+|.-.++..+|||+.......... +.......+|+.-|.++. +=.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 45566677999999888999999988764322111 001122446777777763 333444
Q ss_pred eeeEEecCCCCceEEEEEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 005734 449 LIGYCEDDEPFNRMMVFEYAPNG-TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD 527 (680)
Q Consensus 449 l~g~~~~~~~~~~~lV~ey~~~G-sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 527 (680)
-+++. ...|||||+... .-.-.|.+- .+....-..+..++.+++.-|-..+ ++||+||..=|||+. +
T Consensus 135 Pi~~~------~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a--~LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 135 PIAFR------NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEA--GLVHGDLSEYNILVH-D 202 (268)
T ss_pred ceeec------CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhc--CcccccchhhheEEE-C
Confidence 44433 338999999643 111112111 1222244556677777777777633 899999999999999 8
Q ss_pred CCeEEccccccccc
Q 005734 528 YAAKVAEICFTTIA 541 (680)
Q Consensus 528 ~~~ki~DFGla~~~ 541 (680)
+.+.|+|||-|...
T Consensus 203 ~~p~iID~~QaV~~ 216 (268)
T COG1718 203 GEPYIIDVSQAVTI 216 (268)
T ss_pred CeEEEEECcccccc
Confidence 89999999876544
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.90 E-value=9.5e-06 Score=92.86 Aligned_cols=184 Identities=16% Similarity=0.154 Sum_probs=115.1
Q ss_pred CCCCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCH-HHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 441 INHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDW-NARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 441 l~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~-~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
.+||-+++..--+.... -.+||++|..+|+|...||... ..+- ..|.- ...+.+++.|||.. .++|||+||
T Consensus 861 p~~P~v~~~~~s~~~rs--P~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~-i~~~vqs~e~L~s~---~r~h~~~~p 932 (1205)
T KOG0606|consen 861 PRSPAVVRSFPSFPCRS--PLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSP-ILERVQSLESLHSS---LRKHRDLKP 932 (1205)
T ss_pred CCCCceecccCCCCCCC--CcchhhHHhccCCchhhhhcCC--Ccccccccch-hHHHHhhhhccccc---hhhcccccc
Confidence 34555554433322222 3489999999999999997543 1221 23333 34456788999997 699999999
Q ss_pred CCeeecCCCCeEEcccccccccCC------CC-Ccc-cc--------------------------cccCCC-----CCCC
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALP------KS-KVS-DD--------------------------IENSVL-----PPLA 560 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~------~~-~~~-~~--------------------------~~~~~~-----~~~~ 560 (680)
.|.+...++..+++|||......- .. ... +. .+.+.. ...-
T Consensus 933 ~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~h 1012 (1205)
T KOG0606|consen 933 DSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRH 1012 (1205)
T ss_pred cchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccC
Confidence 999999999999999985443320 00 000 00 001111 1122
Q ss_pred CCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCC
Q 005734 561 DPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640 (680)
Q Consensus 561 s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP 640 (680)
...+|.|++|++++|.++|..||.....+.+.+ ..... |..+...+.+...++.+++..-+..+|.+|-
T Consensus 1013 gs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~---ni~~~--------~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~ 1081 (1205)
T KOG0606|consen 1013 GSAADWWSSGVCLFEVLTGIPPFNAETPQQIFE---NILNR--------DIPWPEGPEEGSYEAQDLINRLLTEEPTQRL 1081 (1205)
T ss_pred CCcchhhhhhhhhhhhhcCCCCCCCcchhhhhh---ccccC--------CCCCCCCccccChhhhhhhhhhhccCchhcc
Confidence 445899999999999999999998665443332 11111 1112222333445677788888888898888
Q ss_pred CHH
Q 005734 641 TMN 643 (680)
Q Consensus 641 tm~ 643 (680)
.|.
T Consensus 1082 ~a~ 1084 (1205)
T KOG0606|consen 1082 GAK 1084 (1205)
T ss_pred Ccc
Confidence 766
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.89 E-value=1.1e-05 Score=57.57 Aligned_cols=36 Identities=50% Similarity=0.729 Sum_probs=19.5
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEccCCccc
Q 005734 120 KLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFE 156 (680)
Q Consensus 120 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 156 (680)
+|++|+|++|+++ .+|+.+++|++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 45555555555555555555555
|
... |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.7e-07 Score=78.17 Aligned_cols=103 Identities=26% Similarity=0.362 Sum_probs=68.6
Q ss_pred EeEEEcCCCCCcccCCc---ccCCCCCCCEEEccCccCcccCCcccCCC-CCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 73 VQMLDMKERSLEGTLAP---DLGKLSDLRFLVLQKNHFSGVIPKELGEL-TKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 73 l~~L~l~~~~l~g~~p~---~~~~l~~L~~L~L~~N~l~g~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
+..++|+++.|. .+++ .+.....|+..+|++|.|. .+|+.|... +-++.|+|++|.++ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 345566666554 2333 3344455666677888777 556665543 46777888888887 677778888888888
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCccc
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLT 179 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~ 179 (680)
++++|.|. ..|.-+..|.+|-.|+..+|..
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCcc
Confidence 88888877 5666666677777777666543
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0002 Score=74.56 Aligned_cols=254 Identities=9% Similarity=0.107 Sum_probs=137.8
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEE----ecCCCC-ce
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYC----EDDEPF-NR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~----~~~~~~-~~ 461 (680)
+.-+|+|+.+.+|.----.+. | .|+........ + .+-+..|.+. .||-+-.=+.|= ..++.. ..
T Consensus 16 gr~LgqGgea~ly~l~e~~d~-V-AKIYh~Pppa~--~------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 16 GRPLGQGGEADLYTLGEVRDQ-V-AKIYHAPPPAA--Q------AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CccccCCccceeeecchhhch-h-heeecCCCchH--H------HHHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 467899999999964321122 2 24443322111 1 1223334444 566544422221 112211 13
Q ss_pred EEEEEecCCC-Chhhhhc----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 462 MMVFEYAPNG-TVFEHLH----IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 462 ~lV~ey~~~G-sL~~~l~----~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
-+.|..+++. ....+++ .+.-...+|...++.+..+|.+.+-||.. +.+-+|+.++|+|++++..+.+.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence 4556655442 2222222 12235689999999999999999999998 88999999999999999999887632
Q ss_pred cccccCCCC-------CcccccccC-----CCCCCCCCCCCeeehhHHHHHHHhC-CCCCCccc-----cccHHHHHH-H
Q 005734 537 FTTIALPKS-------KVSDDIENS-----VLPPLADPETNIYSFGILMLEIISG-KLPYCEEK-----ELSIEKWAA-D 597 (680)
Q Consensus 537 la~~~~~~~-------~~~~~~~~~-----~~~~~~s~~sDVySfGvvllElltG-~~p~~~~~-----~~~~~~~~~-~ 597 (680)
--....... ....+.|+. ...-..++..|-|.+||++++++.| ++||.+.. +......+. .
T Consensus 163 sfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 163 SFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred ceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 111111000 001111111 1122346779999999999999985 99997521 111110111 0
Q ss_pred HhcCCCCcccccCcccCCCC-HHHHHHHHHHHHHcccc--CCCCCCCHHHHHHHHHHhhc
Q 005734 598 YLNEPRNFSCMIDPSLKSFK-QNELEAICEVIKECIKT--DLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 598 ~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~l~~~C~~~--~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+-.......-..+.-.+.+ .-.+..+..+..+|... .+.-|||++..+..|.++..
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 00000000000000000111 11234566777888865 36789999999988887753
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0002 Score=72.27 Aligned_cols=135 Identities=13% Similarity=0.124 Sum_probs=79.5
Q ss_pred CCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEEecCCCCh
Q 005734 395 SGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTV 473 (680)
Q Consensus 395 ~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL 473 (680)
....||+...+ +..+.||...... ..+..+|++++..+. +--+.+++++....+ ..++||||+++.++
T Consensus 11 ~~~~v~~~~~~-~~~~~vk~~~~~~--------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e~i~G~~l 79 (244)
T cd05150 11 SGATVYRLDGK-NPGLYLKIAPSGP--------TYELEREAERLRWLAGKLPVPEVIDYGSDDG--RAWLLTSAVPGVPA 79 (244)
T ss_pred CcCeEEEEcCC-CCcEEEEecCCCc--------ccchHHHHHHHHHHHhcCCCCeEEEEEecCC--ccEEEEEeeCCccH
Confidence 33789999875 4667777664321 124567888887774 333556777766544 45899999998877
Q ss_pred hhhh-------------------ccCC--CCCCC--HHHHHHHHHH--------------------HHHHHHHHhc----
Q 005734 474 FEHL-------------------HIKE--MDHLD--WNARMRIIMG--------------------TAYCLQYMHH---- 506 (680)
Q Consensus 474 ~~~l-------------------~~~~--~~~l~--~~~rl~ia~~--------------------ia~gL~yLH~---- 506 (680)
.+.. |... ..... +..++..... +...+..|-.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 159 (244)
T cd05150 80 AALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA 159 (244)
T ss_pred hHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC
Confidence 6442 1111 00111 0111111000 1111222211
Q ss_pred CCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 507 ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 507 ~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
...+.++|+|+.|.|||++++....|.||+.+..
T Consensus 160 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 160 EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred cCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 1245699999999999999987788999987643
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00028 Score=70.31 Aligned_cols=144 Identities=13% Similarity=0.126 Sum_probs=82.9
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC--cccceeeEEecCCC-CceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK--NFVNLIGYCEDDEP-FNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~~~~~~~-~~~~lV~ 465 (680)
+.++.|..+.||+....+ ..+++|..... ........|..++..+... .+.++++++..... ...+++|
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH-------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC-------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 357889999999999987 47888875432 2345677888888887533 35567775543321 1358999
Q ss_pred EecCCCChhh----------------h---hccC--CCCCCCHHHH---------HHH------------HHHHHH-HHH
Q 005734 466 EYAPNGTVFE----------------H---LHIK--EMDHLDWNAR---------MRI------------IMGTAY-CLQ 502 (680)
Q Consensus 466 ey~~~GsL~~----------------~---l~~~--~~~~l~~~~r---------l~i------------a~~ia~-gL~ 502 (680)
+|+++..+.. . +|.. ......+... ... ...+.+ .++
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999988877 1 1111 1111222110 000 111222 333
Q ss_pred HHhc----CCCCCeeecCCCCCCeeec-CCCCeEEcccccccc
Q 005734 503 YMHH----ELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTI 540 (680)
Q Consensus 503 yLH~----~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~ 540 (680)
.++. .....++|+|+.|.||+++ +++.+.|.||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 3332 2345799999999999999 666668999987654
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00035 Score=83.05 Aligned_cols=150 Identities=8% Similarity=0.152 Sum_probs=89.8
Q ss_pred cccCCCCCCeEEEEEeCCC---CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcc--cceeeEEecCCC-Cce
Q 005734 389 NIIDTQSGCTIYKGTLSSG---VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNF--VNLIGYCEDDEP-FNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g---~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~ni--v~l~g~~~~~~~-~~~ 461 (680)
..++.|.+..+|+....++ ..+++|+...... ......+.+|+++++.+. |.++ .+++++|.+... ...
T Consensus 44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~----~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL----LQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA 119 (822)
T ss_pred EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc----CccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence 5678899999999887654 3566665432211 011246789999999995 6665 778888876421 145
Q ss_pred EEEEEecCCCChhhh-----------------------hccCCC---------CCCCHH--------HHHHH--------
Q 005734 462 MMVFEYAPNGTVFEH-----------------------LHIKEM---------DHLDWN--------ARMRI-------- 493 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~-----------------------l~~~~~---------~~l~~~--------~rl~i-------- 493 (680)
++||||+++..+.+. ||.-.. .+.+|. ....-
T Consensus 120 flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~ 199 (822)
T PLN02876 120 FYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPP 199 (822)
T ss_pred eEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCC
Confidence 899999987643321 121110 111111 11110
Q ss_pred -HHHHHHHHHHHhcCC--------CCCeeecCCCCCCeeecCC-C-CeEEcccccccccC
Q 005734 494 -IMGTAYCLQYMHHEL--------NPPVAHSNLSSHCIYLTDD-Y-AAKVAEICFTTIAL 542 (680)
Q Consensus 494 -a~~ia~gL~yLH~~~--------~~~ivHrDlKp~NILld~~-~-~~ki~DFGla~~~~ 542 (680)
.-.+.+.++||.... .+.+||+|+++.||+++.+ . .+-|.||.++..-.
T Consensus 200 ~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 200 RNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred CChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 012334466774432 1359999999999999853 3 35788998876543
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.75 E-value=2.9e-06 Score=74.66 Aligned_cols=108 Identities=21% Similarity=0.252 Sum_probs=85.8
Q ss_pred CcEeEEEcCCCCCcccCCccc-CCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..++.++|++|.+. ..|+.| ...+.++.|+|++|.|+ .+|.++..++.|+.|+++.|.|. ..|.-+..|.+|-.|+
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 47889999999998 455555 45568999999999999 78999999999999999999999 6788888899999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE 182 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~ 182 (680)
..+|... +||-.+-.-+++-..++.++.+.+.
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~ 161 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDE 161 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCccccc
Confidence 9999988 6776543333333444555555543
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=97.75 E-value=2.4e-05 Score=55.79 Aligned_cols=37 Identities=43% Similarity=0.611 Sum_probs=30.4
Q ss_pred CCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC
Q 005734 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132 (680)
Q Consensus 95 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 132 (680)
++|++|++++|+|+ .+|+.+++|++|+.|+|++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 46889999999998 57777899999999999999988
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 680 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-23 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-22 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-14 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 1e-14 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-13 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 8e-13 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-12 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 3e-12 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 4e-12 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 4e-12 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 4e-12 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 4e-12 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 4e-12 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 5e-12 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 6e-12 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 6e-12 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 7e-12 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-11 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-11 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 1e-11 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 1e-11 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-11 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 5e-10 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-09 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 6e-09 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 6e-09 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 8e-09 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 1e-08 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 5e-08 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 6e-08 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 8e-08 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 8e-08 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 9e-08 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 1e-07 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-07 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 2e-07 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 2e-07 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 2e-07 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-07 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-07 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 3e-07 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 3e-07 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 3e-07 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 3e-07 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 3e-07 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 3e-07 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 3e-07 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-07 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 3e-07 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 4e-07 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 4e-07 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 4e-07 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 4e-07 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 4e-07 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-07 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 4e-07 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 4e-07 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 5e-07 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 5e-07 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 5e-07 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 6e-07 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 6e-07 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 7e-07 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 7e-07 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 8e-07 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-07 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 1e-06 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 1e-06 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-06 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-06 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 2e-06 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-06 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-06 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 3e-06 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-06 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 3e-06 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 4e-06 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 4e-06 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 5e-06 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 5e-06 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 5e-06 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-06 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 6e-06 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 8e-06 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 8e-06 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 8e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 9e-06 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 1e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 1e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-05 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-05 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 1e-05 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 1e-05 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 1e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 2e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-05 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 2e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 3e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 3e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 3e-05 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 3e-05 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 4e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 4e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-05 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 4e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 4e-05 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 4e-05 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 7e-05 | ||
| 3kmu_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 7e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 8e-05 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 9e-05 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 9e-05 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 9e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 1e-04 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-04 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-04 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-04 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 2e-04 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 2e-04 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-04 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-04 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-04 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-04 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-04 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 2e-04 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 2e-04 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 2e-04 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-04 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-04 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 2e-04 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 2e-04 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-04 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-04 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 2e-04 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 2e-04 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 2e-04 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 2e-04 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 2e-04 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 2e-04 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 2e-04 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-04 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 2e-04 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 2e-04 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 2e-04 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 3e-04 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 3e-04 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 3e-04 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 3e-04 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 3e-04 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 3e-04 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 4e-04 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 4e-04 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 4e-04 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-04 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 4e-04 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 4e-04 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 5e-04 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 5e-04 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 5e-04 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 6e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 7e-04 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 8e-04 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-04 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 9e-47
Identities = 76/311 (24%), Positives = 142/311 (45%), Gaps = 68/311 (21%)
Query: 379 ELDTACEDFS--NIIDTQSGC----TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYR 432
EL A ++FS NI+ G +YKG L+ G +AV ++ E+ ++
Sbjct: 24 ELQVASDNFSNKNIL----GRGGFGKVYKGRLADGTLVAVKRLKEERTQ----GGELQFQ 75
Query: 433 KQVDTLSRINHKNFVNLIGYC-EDDEPFNRMMVFEYAPNGTVFEHLH--IKEMDHLDWNA 489
+V+ +S H+N + L G+C E R++V+ Y NG+V L + LDW
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTE---RLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAH-----SNLSSHCIYLTDDYAAKVAEICFTTIALPK 544
R RI +G+A L Y+H +P + H +N I L +++ A V + F L
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAAN-----ILLDEEFEAVVGD--F---GL-- 180
Query: 545 SKVSDDIENSV----------LPPLADPE----------TNIYSFGILMLEIISGKLPY- 583
+K+ D + V + PE T+++ +G+++LE+I+G+ +
Sbjct: 181 AKLMDYKDTHVTTAVRGTIGHIA----PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
Query: 584 ----CEEKELSIEKWAADYLNEPRNFSCMIDPSLKS-FKQNELEAICEVIKECIKTDLRQ 638
+ ++ + W L E + ++D L+ +K E+E + +V C ++ +
Sbjct: 237 LARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME 295
Query: 639 RPTMNDIIVQL 649
RP M++++ L
Sbjct: 296 RPKMSEVVRML 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 2e-44
Identities = 66/309 (21%), Positives = 125/309 (40%), Gaps = 64/309 (20%)
Query: 379 ELDTACEDFSNIIDTQSGCTI--------YKGTLSSGVEIAV----AATAITSS---KDW 423
EL +F + G + YKG ++ +AV A IT+ + +
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQF 77
Query: 424 LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLH-IKEM 482
QE + +++ H+N V L+G+ D + + +V+ Y PNG++ + L +
Sbjct: 78 D--QE------IKVMAKCQHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 483 DHLDWNARMRIIMGTAYCLQYMHHELNPPVAH-----SNLSSHCIYLTDDYAAKVAEICF 537
L W+ R +I G A + ++H H +N I L + + AK+++ F
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSAN-----ILLDEAFTAKISD--F 177
Query: 538 TTIALPKSKVSDDIENSVLPPL-------ADPE---------TNIYSFGILMLEIISGKL 581
L ++ S+ +V+ PE ++IYSFG+++LEII+G
Sbjct: 178 ---GL--ARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
Query: 582 PYCEEK-ELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640
E + + + +E + ID + +EA+ V +C+ +RP
Sbjct: 233 AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 641 TMNDIIVQL 649
+ + L
Sbjct: 293 DIKKVQQLL 301
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 5e-44
Identities = 64/314 (20%), Positives = 131/314 (41%), Gaps = 67/314 (21%)
Query: 379 ELDTACEDFS--NIIDTQSG----CTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYR 432
+L+ A +F +I G +YKG L G ++A+ K
Sbjct: 33 DLEEATNNFDHKFLI----GHGVFGKVYKGVLRDGAKVAL--------KRRTPESSQGIE 80
Query: 433 K---QVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMD--HLDW 487
+ +++TLS H + V+LIG+C++ +++++Y NG + HL+ ++ + W
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSW 138
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAH-----SNLSSHCIYLTDDYAAKVAEICFTTIAL 542
R+ I +G A L Y+H + H N I L +++ K+ + F +
Sbjct: 139 EQRLEICIGAARGLHYLH---TRAIIHRDVKSIN-----ILLDENFVPKITD--F---GI 185
Query: 543 PKSKVSDDIENS-----VL--PPLADPE---TN-------IYSFGILMLEIISGKLP--- 582
SK +++ + V DPE +YSFG+++ E++ +
Sbjct: 186 --SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ 243
Query: 583 YCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS-FKQNELEAICEVIKECIKTDLRQRPT 641
+ +++ +WA + N ++DP+L + L + +C+ RP+
Sbjct: 244 SLPREMVNLAEWAVESHNN-GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
Query: 642 MNDIIVQLRQVINI 655
M D++ +L + +
Sbjct: 303 MGDVLWKLEYALRL 316
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 139 bits (354), Expect = 5e-37
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 31 EGMALLEFRTRVISDPFGVFSNWN-KNDSTPCLWSGVRCLN----GKVQMLDMKERSLEG 85
+ ALL+ + + +P S+W D W GV C +V LD+ +L
Sbjct: 7 DKQALLQIKKD-LGNP-TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPK 64
Query: 86 TLA--PDLGKLSDLRFLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRL 142
L L L FL + N+ G IP + +LT+L L +++ +SG IP +S++
Sbjct: 65 PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
Query: 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+L L N G++P +S L + FD
Sbjct: 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-25
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
L + ++ G + L ++ L L N SG +P + L L + N++SG
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 134 IIPVEISRLPSLKRLL-LGNNKFEGSIPLELSRFTL 168
IP L + + N+ G IP + L
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL 199
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Query: 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128
+ + + L G + P L+ L F+ L +N G G + + L+
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
N L+ + ++ +L L L NN+ G++P L++ L L
Sbjct: 231 NSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSL 273
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 8e-21
Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 3/100 (3%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDL-RFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+ + G + G S L + + +N +G IP L L +DLS N L
Sbjct: 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLE 210
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
G V + +++ L N + ++ L+ L
Sbjct: 211 GDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGL 249
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 2e-17
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
Q + + + SL L +G +L L L+ N G +P+ L +L L L++S N L G
Sbjct: 224 QKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPL 161
IP + L NNK PL
Sbjct: 283 EIP-QGGNLQRFDVSAYANNKCLCGSPL 309
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 6e-31
Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 32/177 (18%)
Query: 27 SLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGT 86
SL E L+ F+ V+ D + +W+ ++ PC + GV C + KV +D+ + L
Sbjct: 9 SLYREIHQLISFK-DVLPDK-NLLPDWS-SNKNPCTFDGVTCRDDKVTSIDLSSKPLNVG 65
Query: 87 LA--------------------------PDLGKLSDLRFLVLQKNHFSGVIP--KELGEL 118
+ + L L L +N SG + LG
Sbjct: 66 FSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSC 125
Query: 119 TKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
+ L+ L++S+N L V +L SL+ L L N G+ + EL+
Sbjct: 126 SGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKH 182
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-27
Identities = 39/99 (39%), Positives = 51/99 (51%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
+ L + LEG + +L + L L+L N +G IP L T L + LSNN+L+G
Sbjct: 445 RDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 504
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
IP I RL +L L L NN F G+IP EL L L
Sbjct: 505 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 543
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 4e-26
Identities = 38/99 (38%), Positives = 49/99 (49%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
L + L GT+ LG LS LR L L N G IP+EL + LE L L N L+G
Sbjct: 421 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
IP +S +L + L NN+ G IP + R L+ L
Sbjct: 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 6e-26
Identities = 38/99 (38%), Positives = 51/99 (51%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
Q L ++ G + P L S+L L L N+ SG IP LG L+KL L L N L G
Sbjct: 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
IP E+ + +L+ L+L N G IP LS T L+ +
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 495
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 4e-25
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
+ L + L G + L ++L ++ L N +G IPK +G L L +L LSNN SG
Sbjct: 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLL 169
IP E+ SL L L N F G+IP + + +
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK 564
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 7e-25
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 69 LNGKVQMLDMKERSLEGTLAPDLGK--LSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126
L+ + LD+ + G + P+L + + L+ L LQ N F+G IP L ++L L L
Sbjct: 366 LSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHL 425
Query: 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
S N LSG IP + L L+ L L N EG IP EL L L D
Sbjct: 426 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 4e-23
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 74 QMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
Q L + E G + L G L L L NHF G +P G + LE L LS+N S
Sbjct: 272 QYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 331
Query: 133 GIIPVE-ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
G +P++ + ++ LK L L N+F G +P L L + L
Sbjct: 332 GELPMDTLLKMRGLKVLDLSFNEFSGELPESL--TNLSASLLT 372
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 6e-23
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
++ R G +P + FL + N SG IPKE+G + L +L+L +N +
Sbjct: 609 TRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDI 668
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
SG IP E+ L L L L +NK +G IP +S T+L+E+
Sbjct: 669 SGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-23
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
+ LD+ + + P LG S L+ L + N SG + + T+L+LL++S+N+ G
Sbjct: 203 EFLDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVG 261
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
IP L SL+ L L NKF G IP L L
Sbjct: 262 PIPP--LPLKSLQYLSLAENKFTGEIPDFL--SGACDTLTG 298
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-22
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
+ + L G + +G+L +L L L N FSG IP ELG+ L LDL+ N +G
Sbjct: 493 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180
IP + + + N G + + + E L
Sbjct: 553 TIPAAMFKQS----GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLE 595
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 1e-21
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNK 130
+ LD+ G + P G S L L L N+FSG +P + L ++ L++LDLS N+
Sbjct: 295 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNE 354
Query: 131 LSGIIPVEISRL-PSLKRLLLGNNKFEGSIPLELSRFTLLS 170
SG +P ++ L SL L L +N F G I L + +
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNT 395
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 2e-21
Identities = 29/91 (31%), Positives = 40/91 (43%)
Query: 82 SLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISR 141
+G + L +LS + + G + LD+S N LSG IP EI
Sbjct: 595 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654
Query: 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+P L L LG+N GSIP E+ L+ L
Sbjct: 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 3e-21
Identities = 38/90 (42%), Positives = 49/90 (54%)
Query: 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130
G + LDM L G + ++G + L L L N SG IP E+G+L L +LDLS+NK
Sbjct: 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSIP 160
L G IP +S L L + L NN G IP
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 5e-21
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 72 KVQMLDMKERSLEGTLAPDL---GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128
+++LD+ S+ G +L+ L + N SG + + LE LD+S+
Sbjct: 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSS 209
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
N S IP + +L+ L + NK G +S T L L
Sbjct: 210 NNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 4e-18
Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 2/101 (1%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKN--HFSGVIPKELGELTKLELLDLSNNKL 131
Q + + G + + N F G+ ++L L+ ++++
Sbjct: 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 620
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
G S+ L + N G IP E+ L L
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 661
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 6e-16
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
+L + S G + +LG L +L L N F+G IP + + + ++ N ++G
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS----GKIAANFIAG 572
Query: 134 IIPVEISRLPSLKRLLLGNN--KFEGSIPLELSRFTLLSELQF 174
V I K N +F+G +L+R + +
Sbjct: 573 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI 615
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 9e-15
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 6/103 (5%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNN--KL 131
LD+ GT+ + K S + N +G + + + N +
Sbjct: 541 IWLDLNTNLFNGTIPAAMFKQSGK----IAANFIAGKRYVYIKNDGMKKECHGAGNLLEF 596
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
GI +++RL + + + + G + L
Sbjct: 597 QGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 639
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-31
Identities = 54/317 (17%), Positives = 110/317 (34%), Gaps = 55/317 (17%)
Query: 375 LNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQ 434
L + + ++K L +AV I + W E
Sbjct: 16 TENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYE------ 68
Query: 435 VDTLSRINHKNFVNLIGYCE--DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMR 492
V +L + H+N + IG + + ++ + G++ + L + WN
Sbjct: 69 VYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCH 125
Query: 493 IIMGTAYCLQYMHHEL-------NPPVAHSNLSSHCIYLTDDYAAKVAEICF-TTIALPK 544
I A L Y+H ++ P ++H ++ S + L ++ A +A+ F +
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD--FGLALKFEA 183
Query: 545 SKVSDDIENSV-----LPP-LADPETN----------IYSFGILMLEIISGKLPY---CE 585
K + D V + P + + N +Y+ G+++ E+ S +
Sbjct: 184 GKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD 243
Query: 586 EKELSIEKWAADYLNEPRNFSCM--------IDPSLKS--FKQNELEAICEVIKECIKTD 635
E L E+ + + + M P L+ K + +CE I+EC D
Sbjct: 244 EYMLPFEEE----IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHD 299
Query: 636 LRQRPTMNDIIVQLRQV 652
R + + ++ Q+
Sbjct: 300 AEARLSAGCVGERITQM 316
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-28
Identities = 47/276 (17%), Positives = 107/276 (38%), Gaps = 55/276 (19%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
++KG G +I V + +DW + + ++ L +H N + ++G C+
Sbjct: 25 ELWKGRWQ-GNDIVVK---VLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP 80
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
+ ++ + P G+++ LH +D + ++ + A + ++H L P + L
Sbjct: 81 APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHAL 139
Query: 518 SSHCIYLTDDYAAKVA-----------EICFTTI-----ALPKSKVSDDIENSVLPPLAD 561
+S + + +D A+++ + AL K + AD
Sbjct: 140 NSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRR------SAD 193
Query: 562 PETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE------PRNFSCMIDPSLKS 615
++SF +L+ E+++ ++P+ +LS + E P S
Sbjct: 194 ----MWSFAVLLWELVTREVPF---ADLSNMEIGMKVALEGLRPTIPPGIS--------- 237
Query: 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
+ +++K C+ D +RP + I+ L +
Sbjct: 238 ------PHVSKLMKICMNEDPAKRPKFDMIVPILEK 267
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 57/293 (19%), Positives = 107/293 (36%), Gaps = 64/293 (21%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEM--AYRKQVDTLSRINHKNFVNLIGYCED 455
+ K ++A+ K ++S+ A+ ++ LSR+NH N V L G C +
Sbjct: 23 VVCKAKWR-AKDVAI--------K-QIESESERKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 456 DEPFNRMMVFEYAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
P +V EYA G+++ LH E + + M + + + Y+H + H
Sbjct: 73 --PV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 515 SNLSSHCIYLTDDYAAKVAEIC-FTTIALPKSKVSDD----------------IENSVLP 557
+L + L V +IC F T + E S
Sbjct: 129 RDLKPPNLLLVAGG--TVLKICDFGT-----ACDIQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 558 PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE----PRNFSCMIDPSL 613
D ++S+GI++ E+I+ + P+ E + A + +N + +
Sbjct: 182 EKCD----VFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN----LPKPI 233
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSP 666
+ ++ C D QRP+M +I+ + ++ P P P
Sbjct: 234 E-----------SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 56/280 (20%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
T+++ G ++AV I +D+ + + ++V + R+ H N V +G +
Sbjct: 52 TVHRAEWH-GSDVAVK---ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV--TQ 105
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEM-DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
P N +V EY G+++ LH + LD R+ + A + Y+H+ NPP+ H N
Sbjct: 106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRN 164
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPP------LADPE------- 563
L S + + Y KV + F S++ S +A PE
Sbjct: 165 LKSPNLLVDKKYTVKVCD--FGL-----SRLKASTFLSSKSAAGTPEWMA-PEVLRDEPS 216
Query: 564 ---TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE------PRNFSCMIDPSLK 614
+++YSFG+++ E+ + + P+ L+ + A + PRN ++P +
Sbjct: 217 NEKSDVYSFGVILWELATLQQPW---GNLNPAQVVAAVGFKCKRLEIPRN----LNPQVA 269
Query: 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+I+ C + +RP+ I+ LR +I
Sbjct: 270 -----------AIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 51/309 (16%), Positives = 107/309 (34%), Gaps = 54/309 (17%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCE--- 454
+YKG+L +AV + + ++++ E K + + + H N I E
Sbjct: 28 AVYKGSLD-ERPVAVKVFSFANRQNFI--NE----KNIYRVPLMEHDNIARFIVGDERVT 80
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL------ 508
D ++V EY PNG++ ++L + DW + R+ L Y+H EL
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD------------------ 550
P ++H +L+S + + +D +++ + V
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197
Query: 551 --IENSVLPPLADP---ETNIYSFGILMLEIISGKLPYCEEKELSIEKWA-ADYLNEPRN 604
+E +V + + ++Y+ G++ EI + + + A +
Sbjct: 198 EVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPT 257
Query: 605 FSCMID-----------PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
F M P + ++ E I++C D R T ++ +++
Sbjct: 258 FEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317
Query: 654 NISPEQAVP 662
I
Sbjct: 318 MIWERNKSV 326
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 1e-24
Identities = 57/274 (20%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 398 TIYKGTLSS-GVEIAV--AATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCE 454
++KG L +A+ + + + + ++++V +S +NH N V L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
P MV E+ P G ++ L + + W+ ++R+++ A ++YM ++ NPP+ H
Sbjct: 94 --NPP--RMVMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVH 147
Query: 515 SNLSSHCIYLT--DDYAAKVAEIC-FTTIALPKSKVSDDIENS-----------VLPPLA 560
+L S I+L D+ A A++ F S+ S + +
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 561 DPETN---IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617
+ T YSF +++ I++G+ P+ E I+ R P++
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR-------PTIPE-- 253
Query: 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
+ + VI+ C D ++RP + I+ +L +
Sbjct: 254 -DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 1e-23
Identities = 49/276 (17%), Positives = 101/276 (36%), Gaps = 47/276 (17%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+Y+ G E+AV A +D ++ E R++ + + H N + L G C +
Sbjct: 22 KVYRAFWI-GDEVAVKAARHDPDEDISQTIEN-VRQEAKLFAMLKHPNIIALRGVCLKEP 79
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
+V E+A G + L K + + + + A + Y+H E P+ H +L
Sbjct: 80 NL--CLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDL 134
Query: 518 SSHCIYLTDDYAAKVAEICFTTIA---LPKSKVSDDIENSVLPP--LADPE--------- 563
S I + I L + ++ +A PE
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMA-PEVIRASMFSK 193
Query: 564 -TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE------PRNFSCMIDPSLKSF 616
++++S+G+L+ E+++G++P+ + + A P
Sbjct: 194 GSDVWSYGVLLWELLTGEVPF---RGIDGLAVAYGVAMNKLALPIPST----CPEPFA-- 244
Query: 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+++++C D RP+ +I+ QL +
Sbjct: 245 ---------KLMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 3e-23
Identities = 49/289 (16%), Positives = 106/289 (36%), Gaps = 47/289 (16%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCE--D 455
+++G G E+AV + + W + E + + H+N + I +
Sbjct: 57 EVWRGKWR-GEEVAVKIFSSREERSWFREAE------IYQTVMLRHENILGFIAADNKDN 109
Query: 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-----NP 510
+V +Y +G++F++L+ + +++ + TA L ++H E+ P
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS-----------VL--- 556
+AH +L S I + + +A++ + D N VL
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226
Query: 557 PPLADPETN----IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID-- 610
+ E+ IY+ G++ EI ++ + + D + + M
Sbjct: 227 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY--DLVPSDPSVEEMRKVV 284
Query: 611 ------PSLKSFKQNE--LEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
P++ + Q+ L + ++++EC + R T I L Q
Sbjct: 285 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 7e-23
Identities = 46/289 (15%), Positives = 104/289 (35%), Gaps = 47/289 (16%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
++ G G ++AV T W + E + + H+N + I
Sbjct: 52 EVWMGKWR-GEKVAVKVFFTTEEASWFRETE------IYQTVLMRHENILGFIAADIKGT 104
Query: 458 PFNR--MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-----NP 510
++ +Y NG+++++L LD + +++ + L ++H E+ P
Sbjct: 105 GSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS-----------VLPPL 559
+AH +L S I + + +A++ + + D N+ VL
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDES 221
Query: 560 ADPETN-------IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID-- 610
+ +YSFG+++ E+ + +E + D + ++ M +
Sbjct: 222 LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH--DLVPSDPSYEDMREIV 279
Query: 611 ------PSLKSFKQNE--LEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
PS + ++ L + +++ EC + R T + L +
Sbjct: 280 CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 8e-22
Identities = 49/289 (16%), Positives = 108/289 (37%), Gaps = 47/289 (16%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC--ED 455
+++G+ G +AV + K W + E+ + H+N + I
Sbjct: 23 EVWRGSWQ-GENVAVKIFSSRDEKSWFRETELY------NTVMLRHENILGFIASDMTSR 75
Query: 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-----NP 510
++ Y G+++++L + LD + +RI++ A L ++H E+ P
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS-----------VL--- 556
+AH +L S I + + +A++ + + D N VL
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 557 PPLADPETN----IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID-- 610
+ ++ I++FG+++ E+ + ++ D + +F M
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF--YDVVPNDPSFEDMRKVV 250
Query: 611 ------PSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
P++ + F L ++ +++KEC + R T I L +
Sbjct: 251 CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 1e-21
Identities = 53/270 (19%), Positives = 105/270 (38%), Gaps = 35/270 (12%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
T+YKG V A + + Q A++ +V L + H N + +GY
Sbjct: 39 TVYKGKWHGDV-----AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAP 92
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
+V ++ +++ HLH E + + I TA + Y+H + H +L
Sbjct: 93 QL--AIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLH---AKSIIHRDL 146
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPP-------LADPETN----- 565
S+ I+L +D K+ + T + S E + ++N
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATE-KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 566 --IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEA 623
+Y+FGI++ E+++G+LPY + P L + N +
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS--------PDLSKVRSNCPKR 257
Query: 624 ICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
+ ++ EC+K +RP+ I+ ++ ++
Sbjct: 258 MKRLMAECLKKKRDERPSFPRILAEIEELA 287
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 3e-21
Identities = 36/279 (12%), Positives = 86/279 (30%), Gaps = 50/279 (17%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+Y G E+A+ + + + Q A++++V + H+N V +G C
Sbjct: 48 QVYHGRWHG--EVAIR---LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
++ T++ + + LD N +I + Y+H + H +L
Sbjct: 103 HL--AIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDL 156
Query: 518 SSHCIYLTDDYAAKVA------EICFTTIALPKSKVSDD-----------IENSVLPPLA 560
S + D+ + + K+ I
Sbjct: 157 KSKNV-FYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE 215
Query: 561 DPET-----NIYSFGILMLEIISGKLPYCEEKELSIEKWAA--DYLNEPRNFSCMIDPSL 613
D ++++ G + E+ + + P+ + +I W +
Sbjct: 216 DKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IWQMGTGMKPNLSQIGM--GKEI 272
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+++ C + +RPT ++ L ++
Sbjct: 273 S-----------DILLFCWAFEQEERPTFTKLMDMLEKL 300
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 2e-20
Identities = 52/299 (17%), Positives = 95/299 (31%), Gaps = 50/299 (16%)
Query: 395 SGC--TIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG 451
GC K T +G + + + + + + K+V + + H N + IG
Sbjct: 20 KGCFGQAIKVTHRETGEVMV-----MKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP 511
D+ + EY GT+ + W+ R+ A + Y+H
Sbjct: 75 VLYKDKRL--NFITEYIKGGTLRGIIK-SMDSQYPWSQRVSFAKDIASGMAYLHSM---N 128
Query: 512 VAHSNLSSHCIYLTDDYAAKVA-----------EICFTTIALPKSKVSDDIENSVLPPL- 559
+ H +L+SH + ++ VA + + K V P
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 560 -ADPE----------TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
A PE +++SFGI++ EII + + D+ R F
Sbjct: 189 MA-PEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT-----MDFGLNVRGFLDR 242
Query: 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPL 667
P N + + C D +RP+ + L + + +P L
Sbjct: 243 YCP------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET-LRMHLAGHLPLGPQL 294
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-19
Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 11/132 (8%)
Query: 51 SNWNKNDSTPCLWS---GVRCLN-GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNH 106
+NWN N +W GV + G+V L ++ G + +G+L++L L L +
Sbjct: 58 ANWNFNKE-LDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHG 116
Query: 107 FSG----VIPKELGELTKLELLDLSNNKLSGIIPVEISRL--PSLKRLLLGNNKFEGSIP 160
PK + E R L + + ++ + SI
Sbjct: 117 EKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK 176
Query: 161 LELSRFTLLSEL 172
+++
Sbjct: 177 KSSRITLKDTQI 188
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 5e-17
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 84 EGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLP 143
+ L K+ L L N G +P G KL L+L+ N+++ I
Sbjct: 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTE 377
Query: 144 SLKRLLLGNNKFEGSIP--LELSRFTLLSELQFDD 176
++ L +NK + IP + +++S + F
Sbjct: 378 QVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSY 411
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-15
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 9/107 (8%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
ML+ LEG L P G L L L N + + G ++E L ++NKL
Sbjct: 333 GMLECLYNQLEGKL-PAFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKY 391
Query: 134 I-IPVEISRLPSLKRLLLGNNKFEG-------SIPLELSRFTLLSEL 172
I + + + + N+ + + +S +
Sbjct: 392 IPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSI 438
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-15
Identities = 19/119 (15%), Positives = 35/119 (29%), Gaps = 9/119 (7%)
Query: 68 CLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGV-------IPKELGELTK 120
V +++ + S L + L N + + +
Sbjct: 430 FKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYL 489
Query: 121 LELLDLSNNKLSGIIP-VEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYL 178
L +DL NKL+ + + LP L + L N F P + + L +
Sbjct: 490 LTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR 547
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 3e-15
Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 9/97 (9%)
Query: 85 GTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI-------IPV 137
L P K ++ + L N S + + L ++L N L+ I
Sbjct: 423 DPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENE 482
Query: 138 EISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
L + L NK + + T L L
Sbjct: 483 NFKNTYLLTSIDLRFNKLT-KLSDDFR-ATTLPYLVG 517
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 5e-15
Identities = 12/120 (10%), Positives = 31/120 (25%), Gaps = 20/120 (16%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ + + ++ + N+ + + K + LTKL + N+
Sbjct: 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPF 218
Query: 132 SG-------------------IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
++ L L + + N +P L + +
Sbjct: 219 VAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLI 278
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 6e-15
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 14/97 (14%)
Query: 90 DLGKLSDLRFLVLQKNHFSGV-------IPKELGELTKLELLDLSNNKLSGIIPVEISRL 142
D +S + + N V + + + ++LSNN++S S
Sbjct: 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTG 456
Query: 143 PSLKRLLLGNNKFEG-------SIPLELSRFTLLSEL 172
L + L N LL+ +
Sbjct: 457 SPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSI 493
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 4e-14
Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 10/96 (10%)
Query: 85 GTLAPDLGKLSDLRFLVLQKNHFSGVIPKEL--GELTKLELLDLSNNKLSGIIPVEISRL 142
+ L + L+ N + + + L L +DLS N S P +
Sbjct: 478 KDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNS 535
Query: 143 PSLKRLLLGN------NKFEGSIPLELSRFTLLSEL 172
+LK + N N+ P ++ L++L
Sbjct: 536 STLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQL 571
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 8e-14
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 3/95 (3%)
Query: 82 SLEGTLAPDLGKL--SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI 139
+ T + SDL + + I K K + +N ++ + +
Sbjct: 144 HYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAV 202
Query: 140 SRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
RL L++ +GN+ F E Q
Sbjct: 203 MRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQ 237
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 9e-14
Identities = 18/182 (9%), Positives = 51/182 (28%), Gaps = 27/182 (14%)
Query: 18 LINNLQGCWSLNLEGMALLEFRTRVIS-DPFGVFS----NWNKNDSTPCLWSGVRCLNGK 72
+ S + + ++ + DP FS + +D + K
Sbjct: 125 GPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSG-------------------VIPK 113
+ ++ ++ + +L+ LR + + F
Sbjct: 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243
Query: 114 ELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEG--SIPLELSRFTLLSE 171
+ L L +++ N +P + LP ++ + + N+ + +
Sbjct: 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPV 303
Query: 172 LQ 173
+
Sbjct: 304 GE 305
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 4e-13
Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 9/92 (9%)
Query: 89 PDLGKLSDLRFLVLQ------KNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRL 142
S L+ ++ N P+ + L L + +N + + +I
Sbjct: 530 TQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKI--T 586
Query: 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
P++ L + +N + +
Sbjct: 587 PNISVLDIKDNPNISIDLSYVCPYIEAGMYML 618
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 6e-11
Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 6/93 (6%)
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGII 135
D + + L L + N + +++ + +LD+ +N I
Sbjct: 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKI--TPNISVLDIKDNPNISID 603
Query: 136 PVEISRLPSLKRLLLGNNKFE---GSIPLELSR 165
+ +L +K + G L++ R
Sbjct: 604 LSYVCPYIEAGMYMLFYDKTQDIRGCDALDIKR 636
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 2e-18
Identities = 20/104 (19%), Positives = 35/104 (33%)
Query: 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128
L + LD+ L + +L+ L L + + L+ L L L+
Sbjct: 26 LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
N + + S L SL++L+ + L EL
Sbjct: 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 9e-18
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 74 QMLDMKERSLEGTLAPD-LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
++L M S + PD +L +L FL L + + P L+ L++L++S+N
Sbjct: 448 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 507
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSR-FTLLSEL 172
+ L SL+ L N S EL + L+ L
Sbjct: 508 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 548
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 1e-17
Identities = 25/100 (25%), Positives = 34/100 (34%), Gaps = 1/100 (1%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNKLS 132
LD+ LS L L + N F + EL L LDLS +L
Sbjct: 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 483
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+ P + L SL+ L + +N F L L
Sbjct: 484 QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 523
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 1e-16
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
Q+LD+ ++ LS L L+L N + L+ L+ L L+
Sbjct: 55 QVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 114
Query: 134 IIPVEISRLPSLKRLLLGNNKFEG-SIPLELSRFTLLSEL 172
+ I L +LK L + +N + +P S T L L
Sbjct: 115 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-16
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 82 SLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI-IPVEIS 140
++ LS L+ LV + + + + +G L L+ L++++N + +P S
Sbjct: 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 146
Query: 141 RLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180
L +L+ L L +NK + +L + L L+
Sbjct: 147 NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 1e-15
Identities = 17/82 (20%), Positives = 29/82 (35%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
+ L L N + +L++LDLS ++ I L L L+L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 155 FEGSIPLELSRFTLLSELQFDD 176
+ S + L +L +
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVE 109
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 1e-15
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNKLSGIIPVEISRLPS 144
T++ + L L L Q ++ + L L LD+S+ + L S
Sbjct: 387 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 145 LKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
L+ L + N F+ + ++ FT L L F
Sbjct: 447 LEVLKMAGNSFQENFLPDI--FTELRNLTF 474
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 5e-13
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 82 SLEGTLAPDLGKLSDLRFLVLQKNH--FSGVIPKELGELTKLELLDLSNNKLSGIIPVEI 139
S +G A L L FL L +N F G + T L+ LDLS N + +
Sbjct: 334 SNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NF 392
Query: 140 SRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
L L+ L ++ + + F L L +
Sbjct: 393 LGLEQLEHLDFQHSNLKQMSEFSV--FLSLRNLIY 425
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 2e-12
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDLSNNKLS 132
Q L E +L +G L L+ L + N +P+ LT LE LDLS+NK+
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
Query: 133 GIIPVEISRLPSLK----RLLLGNNKFEGSIPLELSRFTLLS 170
I ++ L + L L N P L
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHK 204
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 3e-11
Identities = 39/177 (22%), Positives = 53/177 (29%), Gaps = 12/177 (6%)
Query: 6 NSIGFQFFCFLVLINNLQGCWSLNLEGMAL--LEFRTRVISDPFGVFSNWNKNDSTPCLW 63
+ + L+G +L +E L L++ I D F +N +
Sbjct: 235 GEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTI 294
Query: 64 SGVRCL--NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKL 121
V+ N Q L++ L L L F G +L L
Sbjct: 295 ERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTF-----TSNKGGNAFSEVDLPSL 349
Query: 122 ELLDLSNNKLS--GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
E LDLS N LS G SLK L L N + L L F
Sbjct: 350 EFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQH 405
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 9e-10
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL-TKLELLDLSNNKLS 132
Q+L+M + L+ L+ L NH +EL + L L+L+ N +
Sbjct: 497 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Query: 133 GIIPVE--ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
+ + + ++LL+ + E + P + +LS
Sbjct: 557 CTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLS 596
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 6e-08
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRF----LVLQKNHFSGVIPKELGELTKLELLDLSNN 129
+ LD+ ++ DL L + L L N + + P E+ +L L L NN
Sbjct: 152 EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNN 210
Query: 130 KLSG-IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
S ++ I L L+ L +F LE + L L
Sbjct: 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLC 255
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 16/115 (13%), Positives = 33/115 (28%), Gaps = 12/115 (10%)
Query: 72 KVQMLDMKERSLEGTLAPD-LGKLSDLRFLVLQKNHFSGVIPKE---LGELTKLELLDLS 127
++ L ++ + + L+ L L F E L L L +
Sbjct: 201 RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIE 260
Query: 128 NNKLSGI------IPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+L+ + I + L ++ L + E S L+ +
Sbjct: 261 EFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVN 313
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 8e-17
Identities = 22/100 (22%), Positives = 43/100 (43%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+ +L++ L A + + S L L + N S + P+ +L L++L+L +N+LS
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+ + +L L L +N + + L L
Sbjct: 87 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITL 126
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 1e-15
Identities = 24/99 (24%), Positives = 36/99 (36%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
LD+ ++ KL L+ L LQ N S + K T L L L +N +
Sbjct: 52 TSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK 111
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
I + +L L L +N + + L EL
Sbjct: 112 IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQEL 150
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 2e-15
Identities = 25/89 (28%), Positives = 34/89 (38%)
Query: 82 SLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISR 141
L ++L L L N + + L LDLS+N LS +
Sbjct: 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ 143
Query: 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
L +L+ LLL NNK + EL F S
Sbjct: 144 LENLQELLLSNNKIQALKSEELDIFANSS 172
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-15
Identities = 20/79 (25%), Positives = 34/79 (43%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
+++ L L N + ++L LD+ N +S + P +LP LK L L +N
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83
Query: 154 KFEGSIPLELSRFTLLSEL 172
+ + T L+EL
Sbjct: 84 ELSQLSDKTFAFCTNLTEL 102
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 4e-15
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG--ELTKLELLDLSNN 129
+ LD+ L T +L +L+ L+L N + +EL + L+ L+LS+N
Sbjct: 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
++ P + L L L N + S+ +L + ++
Sbjct: 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIR 225
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-14
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 77 DMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP 136
+ + + G L LS L L L+ N F + + +L +L+++DL N L+ +
Sbjct: 518 RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577
Query: 137 VEISRLPSLKRLLLGNNKFEGSIPLELSR-FTLLSEL 172
+ SLK L L N F L+EL
Sbjct: 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-14
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
L + S++ K +L L L N S +L L+ L LSNNK+
Sbjct: 100 TELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA 159
Query: 134 IIPVEIS--RLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+ E+ SLK+L L +N+ + P L L
Sbjct: 160 LKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGL 200
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 3e-14
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV-EISRLPSLKRLLLGN 152
S L L L KN S + L LE+LDL N++ + E L ++ + L
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 153 NKFEGSIPLELSRFTLLSELQFDD 176
NK+ + L L
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRR 463
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 5e-14
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 2/106 (1%)
Query: 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLSN 128
+ + +L++ + + + L L L L N + +E L + + LS
Sbjct: 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSY 439
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
NK + + +PSL+RL+L + + S F L L
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKN-VDSSPSPFQPLRNLTI 484
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 6e-14
Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 8/131 (6%)
Query: 52 NWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLG--KLSDLRFLVLQKNHFSG 109
N + + + N ++ L + L T K ++L L L N+ +
Sbjct: 203 NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262
Query: 110 VIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP------LEL 163
V L +LE L N + + + L +++ L L + + SI ++
Sbjct: 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322
Query: 164 SRFTLLSELQF 174
F L L+
Sbjct: 323 FSFQWLKCLEH 333
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-13
Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 5/114 (4%)
Query: 72 KVQMLDMKERSLEGTLAPDLG---KLSDLRFLVLQKNHFSGVIPKELGEL--TKLELLDL 126
++ L + L +L L + +R L L + S L T L +LDL
Sbjct: 196 RLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255
Query: 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180
S N L+ + + LP L+ L N + L + L T
Sbjct: 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTK 309
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-13
Identities = 23/116 (19%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNN---- 129
MLD+ +L L L + L+ N+ + L L + L+L +
Sbjct: 251 TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQ 310
Query: 130 -----KLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180
L I L L+ L + +N G + L L + TS
Sbjct: 311 SISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTS 366
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 4e-13
Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 10/111 (9%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGV--IPKELGELTKLELLDLSNN 129
+ + + + L+ L+L++ V P L L +LDLSNN
Sbjct: 431 NIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNN 490
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNK--------FEGSIPLELSRFTLLSEL 172
++ I + L L+ L L +N G L + L L
Sbjct: 491 NIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 541
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 5e-13
Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 8/107 (7%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFS--------GVIPKELGELTKLELLD 125
+LD+ ++ L L L L LQ N+ + G L L+ L +L+
Sbjct: 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 542
Query: 126 LSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
L +N I L LK + LG N + L L
Sbjct: 543 LESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSL 589
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 4e-12
Identities = 26/133 (19%), Positives = 38/133 (28%), Gaps = 30/133 (22%)
Query: 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128
L + SL L L L ++ N G+ L L+ L LSN
Sbjct: 303 LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSN 362
Query: 129 ----------------------------NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP 160
NK+S I S L L+ L LG N+ +
Sbjct: 363 SFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422
Query: 161 LELSRFTLLSELQ 173
+ + L +
Sbjct: 423 GQE--WRGLENIF 433
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 9e-12
Identities = 13/90 (14%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ +L+++ + L +L+ + L N+ + + L+ L+L N +
Sbjct: 537 HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLI 596
Query: 132 SGIIPVEISR-LPSLKRLLLGNNKFEGSIP 160
+ + +L L + N F+ +
Sbjct: 597 TSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 7e-11
Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKN---------HFSGVIPKELGELTKLE 122
+++ ++ +++ + L L ++R+L L+++ + L LE
Sbjct: 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLE 332
Query: 123 LLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFE-GSIPLELSRFTLLSELQF 174
L++ +N + GI + L +LK L L N+ ++ E S L
Sbjct: 333 HLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHI 385
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 121 LELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
E+ D S+ KL+ +P ++ ++ L L +N+ +R++ L+ L
Sbjct: 6 HEVADCSHLKLTQ-VPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSL 54
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 2e-16
Identities = 52/263 (19%), Positives = 104/263 (39%), Gaps = 46/263 (17%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T+YKG + VE+A + KS+ ++++ + L + H N V E
Sbjct: 41 TVYKGLDTETTVEVAWC---ELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST 97
Query: 457 EPFNRMMVF--EYAPNGTVFEHLHIKEMDHLDWNARMR----IIMGTAYCLQYMHHELNP 510
+ +V E +GT+ +L K + I+ G LQ++H P
Sbjct: 98 VKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKG----LQFLHTR-TP 150
Query: 511 PVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKSKVSDDIENSVL-------PPLADP 562
P+ H +L I++T + K+ ++ T+ +V+ P + +
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL------KRASFAKAVIGTPEFMAPEMYEE 204
Query: 563 ETN----IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618
+ + +Y+FG+ MLE+ + + PY E + + +P +F + P +K
Sbjct: 205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI-- 262
Query: 619 NELEAICEVIKECIKTDLRQRPT 641
I+ CI+ + +R +
Sbjct: 263 ---------IEGCIRQNKDERYS 276
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 78.0 bits (192), Expect = 4e-15
Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 12/113 (10%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGV---------IPKELGELTKLELL 124
+++ L L L +L+ L + N + + K+++
Sbjct: 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIF 553
Query: 125 DLSNNKLSGI-IPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ N L + ++ L L +NK + L++L+ D
Sbjct: 554 YMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDY 604
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 73.8 bits (181), Expect = 1e-13
Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 11/130 (8%)
Query: 57 DSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFS-------G 109
+ C + +N + + ++ S + ++L N +
Sbjct: 661 RNISCSMDDYKGIN--ASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLK 718
Query: 110 VIPKELGELTKLELLDLSNNKLSGIIP-VEISRLPSLKRLLLGNNKFEGSIPLELSRFTL 168
L +DL NKL+ + + LP L + + N F S P + +
Sbjct: 719 PKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFS-SFPTQPLNSSQ 777
Query: 169 LSELQFDDYL 178
L
Sbjct: 778 LKAFGIRHQR 787
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 1e-13
Identities = 21/189 (11%), Positives = 51/189 (26%), Gaps = 32/189 (16%)
Query: 16 LVLINNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQM 75
+ + ++ + M L + +SD N N S + + ++
Sbjct: 373 PDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGN 432
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGV-------------------IPKELG 116
L + + + +L+ L+ + + F+
Sbjct: 433 LTNRITFIS----KAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWS 488
Query: 117 ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEG---------SIPLELSRFT 167
L L ++L N +P + LP L+ L + N+ + +
Sbjct: 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGP 548
Query: 168 LLSELQFDD 176
+
Sbjct: 549 KIQIFYMGY 557
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 1e-12
Identities = 19/155 (12%), Positives = 39/155 (25%), Gaps = 32/155 (20%)
Query: 31 EGMALLEFR----------TRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKE 80
+ AL + NWN N +W ++
Sbjct: 270 DYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKE-LDMWGDQPGVD---------- 318
Query: 81 RSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEIS 140
L + L L G +P +G+LT+L++L + + +
Sbjct: 319 ----------LDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGD 368
Query: 141 RLPSLKRLLLGNNKFEGSI-PLELSRFTLLSELQF 174
+ ++ + L L+
Sbjct: 369 EELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDL 403
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 1e-11
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGE-LTKLELLDLSNNKLSGI-IPVEISRLPSLK 146
G L L L N IP++ ++E L S+NKL I + +
Sbjct: 589 EAFGTNVKLTDLKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMG 647
Query: 147 RLLLGNNKFEG---SIPLELSRFTLLS 170
+ NK +I + + ++
Sbjct: 648 SVDFSYNKIGSEGRNISCSMDDYKGIN 674
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 1e-11
Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 10/96 (10%)
Query: 85 GTLAPDLGKLSDLRFLVLQKNHFSGVIPKEL--GELTKLELLDLSNNKLSGIIPVEISRL 142
+ L + L+ N + + + L L +D+S N S P +
Sbjct: 718 KPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNS 775
Query: 143 PSLKRL------LLGNNKFEGSIPLELSRFTLLSEL 172
LK N+ P ++ L +L
Sbjct: 776 SQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQL 811
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 6e-11
Identities = 9/94 (9%), Positives = 23/94 (24%), Gaps = 12/94 (12%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPK-----ELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145
+ + + N + + + LS N++ + +
Sbjct: 640 AKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPI 699
Query: 146 KRLLLGNNKFE-------GSIPLELSRFTLLSEL 172
++L NN LL+ +
Sbjct: 700 STIILSNNLMTSIPENSLKPKDGNYKNTYLLTTI 733
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 1e-10
Identities = 11/94 (11%), Positives = 26/94 (27%), Gaps = 10/94 (10%)
Query: 86 TLAPDLGKLSDLRFLVLQK------NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI 139
+ S L+ ++ N P + L L + +N + + ++
Sbjct: 767 SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRK-VDEKL 825
Query: 140 SRLPSLKRLLLGNNKF-EGSIPLELSRFTLLSEL 172
P L L + +N + +
Sbjct: 826 --TPQLYILDIADNPNISIDVTSVCPYIEAGMYV 857
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 7e-08
Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
D + + + L L + N + ++L +L +LD+++N
Sbjct: 785 HQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRK-VDEKL--TPQLYILDIADNPNIS 841
Query: 134 I-IPVEISRLPSLKRLLLGNN--KFEGSIPLELSR 165
I + + + +LL + G L + R
Sbjct: 842 IDVTSVCPYIEAGMYVLLYDKTQDIRGCDALGIER 876
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 4e-14
Identities = 21/100 (21%), Positives = 38/100 (38%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+ +D+ L+ + S+L++L L + + K L L L L+ N +
Sbjct: 34 TKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 93
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
P S L SL+ L+ K + + L +L
Sbjct: 94 SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKL 133
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 5e-14
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 74 QMLDMKERSLEGTLAPD-LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
L M S + + ++L FL L K + L +L+LL++S+N L
Sbjct: 451 NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+ ++L SL L N+ E S + L+
Sbjct: 511 FLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFF 550
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-13
Identities = 22/100 (22%), Positives = 33/100 (33%), Gaps = 1/100 (1%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNKLS 132
LD+ + + L+ L L + N F T L LDLS +L
Sbjct: 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLE 486
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
I L L+ L + +N ++ LS L
Sbjct: 487 QISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L L L+L N P LT LE L KL+ + I +L +LK+L +
Sbjct: 76 WHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135
Query: 151 GNNKFEG-SIPLELSRFTLLSEL 172
+N +P S T L +
Sbjct: 136 AHNFIHSCKLPAYFSNLTNLVHV 158
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 2e-12
Identities = 19/82 (23%), Positives = 30/82 (36%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
S + + L N + ++L+ LDLS ++ I L L L+L N
Sbjct: 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91
Query: 155 FEGSIPLELSRFTLLSELQFDD 176
+ P S T L L +
Sbjct: 92 IQSFSPGSFSGLTSLENLVAVE 113
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 5e-12
Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNKLSGIIPVEISRLPS 144
++ + L +L+ L Q + V L KL LD+S L S
Sbjct: 390 IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTS 449
Query: 145 LKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
L L + N F+ + + F + L F
Sbjct: 450 LNTLKMAGNSFKDNTLSNV--FANTTNLTF 477
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 5e-12
Identities = 22/100 (22%), Positives = 33/100 (33%)
Query: 56 NDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKEL 115
N S V + LD+ + LE L L+ L + N+ +
Sbjct: 458 NSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHY 517
Query: 116 GELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKF 155
+L L LD S N++ + SL L NN
Sbjct: 518 NQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 23/165 (13%), Positives = 47/165 (28%), Gaps = 10/165 (6%)
Query: 91 LGKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
+G+L L+ L + N +P LT L +DLS N + I ++ L ++
Sbjct: 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVN 183
Query: 150 ----LGNNKFEGSIPLELSRFTL----LSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIG 201
+ N + L L + + + ++ G
Sbjct: 184 LSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243
Query: 202 EDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNL 246
E +L L + + + +N+
Sbjct: 244 ERNLEIFEPSIMEGLCDVTIDEF-RLTYTNDFSDDIVKFHCLANV 287
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP--VEISRLPSLKRLLLG 151
L L+ L L N S I + L L LDLS N LS SL+ L L
Sbjct: 327 LPFLKSLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLS 384
Query: 152 NNKFEGSIPLELSRFTLLSELQFDD 176
N + L L F
Sbjct: 385 FNGAI-IMSANFMGLEELQHLDFQH 408
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
D+ K + L + + +L L+ L L+ NK S LPSL L
Sbjct: 301 EDVPKHFKWQSLSIIRCQLKQFPT---LDLPFLKSLTLTMNKGSISFK--KVALPSLSYL 355
Query: 149 LLGNNKFEGSIPLELSRFTLLS 170
L N S S S
Sbjct: 356 DLSRNALSFSGCCSYSDLGTNS 377
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 6/105 (5%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRF----LVLQKNHFSGVIPKELGELTKLELLDLSNN 129
+D+ ++ DL L + L + N I + + KL L L N
Sbjct: 156 VHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF-IQDQAFQGIKLHELTLRGN 214
Query: 130 KLSG-IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
S I+ + L L L +F+ LE+ +++ L
Sbjct: 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLC 259
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 8e-06
Identities = 9/82 (10%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 91 LGKLSDLRF--LVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ L D+ L + + L + + L+ + + ++ + + L
Sbjct: 255 MEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYL--EDVPKHFKWQSL 312
Query: 149 LLGNNKFEGSIPLELSRFTLLS 170
+ + + L+L L+
Sbjct: 313 SIIRCQLKQFPTLDLPFLKSLT 334
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 4e-04
Identities = 8/42 (19%), Positives = 13/42 (30%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+L L L N L +L+NN ++
Sbjct: 517 YNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 7e-14
Identities = 19/100 (19%), Positives = 32/100 (32%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+ L+ L +L +L FL L + + +L+ L L+ N L
Sbjct: 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI 94
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+ +S +LK L + L L L
Sbjct: 95 FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESL 134
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 9e-14
Identities = 19/85 (22%), Positives = 29/85 (34%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L L+ L + S + L LE L L +N +S I + LK L
Sbjct: 101 LSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDF 160
Query: 151 GNNKFEGSIPLELSRFTLLSELQFD 175
NN ++S + L +
Sbjct: 161 QNNAIHYLSKEDMSSLQQATNLSLN 185
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 2e-13
Identities = 18/84 (21%), Positives = 27/84 (32%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L LVL N + L L+ L +S I + + +L+ L L
Sbjct: 77 FQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136
Query: 151 GNNKFEGSIPLELSRFTLLSELQF 174
G+N + L L F
Sbjct: 137 GSNHISSIKLPKGFPTEKLKVLDF 160
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 2e-13
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 50 FSNWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSG 109
F + + D +P ++ G+ ++ V+ +++++ + S L+ L L H S
Sbjct: 235 FEDMDDEDISPAVFEGLCEMS--VESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE 292
Query: 110 VIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLL 169
+P L L+ L+ L LS NK + + S PSL L + N + L
Sbjct: 293 -LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGC--LENL 349
Query: 170 SELQF 174
L+
Sbjct: 350 ENLRE 354
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 1e-12
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
+ L L L + L L++L+LS++ L LP+L+ L
Sbjct: 396 FKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455
Query: 150 LGNNKFEGSIPLELSRFTLLSELQF 174
L N F + + L L+
Sbjct: 456 LQGNHFPKGNIQKTNSLQTLGRLEI 480
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 2e-12
Identities = 16/79 (20%), Positives = 22/79 (27%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
+ L N + L L LDL+ ++ I L L+L N
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91
Query: 154 KFEGSIPLELSRFTLLSEL 172
LS L L
Sbjct: 92 PLIFMAETALSGPKALKHL 110
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 9e-12
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 4/104 (3%)
Query: 72 KVQMLDMKERSLEGT---LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128
+Q L+++ L L L LVL S + L + +DLS+
Sbjct: 450 ALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
N+L+ +S L + L L +N +P L + +
Sbjct: 510 NRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTI 552
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-11
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Query: 72 KVQMLDMKERSLEGTLAPD-LGKLSDLRFLVLQKNH--FSGVIPKELGELTKLELLDLSN 128
+ L +K + L L L +LR L L + S +L L+ L+ L+LS
Sbjct: 326 SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSY 385
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
N+ + P L+ L L + + F L L+
Sbjct: 386 NEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSP--FQNLHLLK 428
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L + + L N + + L L + L +L++N +S I+P + L + + L
Sbjct: 496 FTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYL-NLASNHISIILPSLLPILSQQRTINL 554
Query: 151 GNNKFEGSIPLE 162
N + +
Sbjct: 555 RQNPLDCTCSNI 566
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 5/109 (4%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLEL--LDLSNN 129
++ L + + P L+ L Q N + +++ L + L+L+ N
Sbjct: 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGN 189
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTL--LSELQFDD 176
++G I + L G + I L T+ L F+D
Sbjct: 190 DIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFED 237
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 4e-08
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Query: 82 SLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISR 141
+G + L F + S + + L E++ +E ++L + I
Sbjct: 218 IFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMS-VESINLQKHYFFNISSNTFHC 276
Query: 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
L+ L L +P L + L +L
Sbjct: 277 FSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSA 310
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 3/107 (2%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNH-FSGVIPKELGELTKLELLDLSNNK 130
K+++LD + ++ D+ L L L N I + + L+ +
Sbjct: 154 KLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQ 213
Query: 131 LSGIIPVEIS--RLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFD 175
+I + + SL + E P +S +
Sbjct: 214 NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESIN 260
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 41/259 (15%), Positives = 95/259 (36%), Gaps = 42/259 (16%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRM--MVFEYAPNGTVFEHL--HIKEMDHLDW 487
+++ D NH N + L+ YC + ++ + GT++ + + + L
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
+ + +++G L+ +H AH +L I L D+ + ++ A +
Sbjct: 134 DQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190
Query: 548 SDDIENSV-----------LPP---------LADPETNIYSFGILMLEIISGKLPYCEEK 587
S P + D T+++S G ++ ++ G+ PY
Sbjct: 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY---- 246
Query: 588 ELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL--EAICEVIKECIKTDLRQRPTMNDI 645
D + + + + + S Q+ A+ +++ + D QRP + +
Sbjct: 247 ---------DMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLL 297
Query: 646 IVQLRQVINISPEQAVPRL 664
+ QL + +P Q ++
Sbjct: 298 LSQLEALQPPAPGQHTTQI 316
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 3e-13
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 7/122 (5%)
Query: 53 WNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSD--LRFLVLQKNHFSGV 110
+N + + N Q+ R+L+ A L + L L+
Sbjct: 39 YNADRNRWHSAWRQANSN-NPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLP-Q 95
Query: 111 IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
P + L+ L+ + + L +P + + L+ L L N ++P ++ L
Sbjct: 96 FPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLR 153
Query: 171 EL 172
EL
Sbjct: 154 EL 155
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-12
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN-NKLS 132
+ L ++ L L P + L L L L+ P G L+ L L + + L
Sbjct: 209 KSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL 267
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180
+P++I RL L++L L +P +++ + +L +
Sbjct: 268 -TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 4e-11
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145
+ + L +L+ L L+ +P + L L+ L + N+ LS + I LP L
Sbjct: 174 DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKL 231
Query: 146 KRL-LLGNNKFEGSIPLELSRFTLLSEL 172
+ L L G + P L L
Sbjct: 232 EELDLRGCTALR-NYPPIFGGRAPLKRL 258
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 7e-10
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 12/112 (10%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS-NNKLS 132
Q + + L L + + + L L L +N +P + L +L L + +L+
Sbjct: 107 QHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELT 164
Query: 133 GI--------IPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ E L +L+ L L S+P ++ L L+ +
Sbjct: 165 ELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRN 215
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 13/72 (18%), Positives = 30/72 (41%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
+ L +K+ S TL D+ +L+ L L L+ +P + +L ++ + + +
Sbjct: 256 KRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315
Query: 134 IIPVEISRLPSL 145
+ P+
Sbjct: 316 LDQHRPVARPAE 327
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 2e-12
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L+ + L L NH L +T L L ++ +K+ + P I+ L L L
Sbjct: 126 SPLANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSL 182
Query: 149 LLGNNKFEGSIPLELSRFTLLSEL 172
L N+ E P L+ T L
Sbjct: 183 SLNYNQIEDISP--LASLTSLHYF 204
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 2e-12
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ L+DL L L N + P L LT L N+++ I P ++ + L L
Sbjct: 171 TPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
+GNNK P L+ + L+ L+
Sbjct: 227 KIGNNKITDLSP--LANLSQLTWLEIGT 252
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 7e-12
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L LS L +L + N S + + +LTKL++L++ +N++S I ++ L L L
Sbjct: 237 SPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDISV--LNNLSQLNSL 292
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
L NN+ + T L+ L
Sbjct: 293 FLNNNQLGNEDMEVIGGLTNLTTLFLSQ 320
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 2e-11
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ L+ L+ L + N S + L L++L L L+NN+L I L +L L
Sbjct: 259 NAVKDLTKLKMLNVGSNQISDISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
L N P L+ + + F +
Sbjct: 317 FLSQNHITDIRP--LASLSKMDSADFAN 342
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L LS L L L N + +G LT L L LS N ++ I P ++ L +
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSA 338
Query: 149 LLGNNK 154
N
Sbjct: 339 DFANQV 344
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 1e-10
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ +++ S+ +L + LV+ + + + + LT LE L+L+ N++
Sbjct: 23 EGIRAVLQKASVTDV--VTQEELESITKLVVAGEKVASI--QGIEYLTNLEYLNLNGNQI 78
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ I P +S L L L +G NK + L T L EL ++
Sbjct: 79 TDISP--LSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNE 119
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 1e-10
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L L L + N + L LT L L L+ + +S I P ++ L + L
Sbjct: 82 SPLSNLVKLTNLYIGTNKIT--DISALQNLTNLRELYLNEDNISDISP--LANLTKMYSL 137
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
LG N + LS T L+ L +
Sbjct: 138 NLGANHNLSDLS-PLSNMTGLNYLTVTE 164
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 2e-09
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L++ VLQK + V+ EL + L ++ K++ I I L +L+ L L
Sbjct: 18 DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVASIQG--IEYLTNLEYLNL 73
Query: 151 GNNKFEGSIPLELSRFTLLSELQFDD 176
N+ P LS L+ L
Sbjct: 74 NGNQITDISP--LSNLVKLTNLYIGT 97
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 7e-05
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 100 LVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSI 159
L + + P +L + L ++ ++ L S+ +L++ K SI
Sbjct: 5 LATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA-SI 59
Query: 160 PLELSRFTLLSELQFDD 176
+ T L L +
Sbjct: 60 Q-GIEYLTNLEYLNLNG 75
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
L + L +G L++L L L +NH + + P L L+K++ D +N +
Sbjct: 290 NSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 7e-12
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
+ + + + + ++ LDLS N LS I +++ L+ L L +N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 154 KFEGSIPLELSRFTLLSELQ 173
E LS L+
Sbjct: 69 VLY-----ETLDLESLSTLR 83
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 2e-11
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ ++ + + SL+ LA +++ L L N S + +L TKLELL+LS+N L
Sbjct: 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL 70
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ + L +L+ L L NN + EL + L +
Sbjct: 71 YETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAAN 108
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 6e-11
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 13/142 (9%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ L+ L L N + + E + + L NNKL +I + +L+
Sbjct: 185 KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHF 242
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTN 208
L N F + F+ +Q T ++ G +L
Sbjct: 243 DLRGNGFHCGTLRDF--FSKNQRVQTVAKQTVKKLTGQNEEECTV---------PTLGHY 291
Query: 209 GDHSCANLPGSSETHLVQHSQN 230
G + C +LP L+ +
Sbjct: 292 GAYCCEDLPAPFADRLIALGHH 313
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 3e-10
Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI-IPVEISRLPSLKRL 148
+ + + L N + + + G ++++ LDL N++ + + +L+ L
Sbjct: 115 SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174
Query: 149 LLGNNKFEGSIPLELSRFTLLSEL 172
L N + ++ F L L
Sbjct: 175 NLQYNFIY-DVKGQVV-FAKLKTL 196
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 9e-10
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
DL LS LR L L N+ EL +E L +NN +S + SR K +
Sbjct: 74 LDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRV---SCSRGQGKKNI 125
Query: 149 LLGNNKFEGSIPLELSRFTLLSEL 172
L NNK L+ + + L
Sbjct: 126 YLANNKITMLRDLDEGCRSRVQYL 149
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 8e-12
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ L++L + N + + P L LTKL + ++NN+++ I P ++ L +L L
Sbjct: 62 DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
L NN+ P L T L+ L+
Sbjct: 118 TLFNNQITDIDP--LKNLTNLNRLELSS 143
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 3e-11
Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ L+ L+ L N S V L LT + L +N++S + P ++ L + +L
Sbjct: 325 SPVSSLTKLQRLFFYNNKVSDVSS--LANLTNINWLSAGHNQISDLTP--LANLTRITQL 380
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180
L + + + + ++ + ++
Sbjct: 381 GLNDQAWTNAPVNYKANVSIPNTVKNVTGALI 412
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 6e-11
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L+ L L L +N + P + L L L L N +S I P +S L L+RL
Sbjct: 281 SPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
NNK + L+ T ++ L
Sbjct: 337 FFYNNKVS-DVS-SLANLTNINWLSAGH 362
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 7e-11
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L++L L L N + + P L LT L L+LS+N +S I +S L SL++L
Sbjct: 106 TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISA--LSGLTSLQQL 161
Query: 149 LLGNNKFEGSIPLELSRFTLLSEL 172
GN + L+ T L L
Sbjct: 162 SFGNQV---TDLKPLANLTTLERL 182
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 7e-11
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
LG L++L L L N + L LT L LDL+NN++S + P +S L L L
Sbjct: 215 TPLGILTNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 270
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
LG N+ P L+ T L+ L+ ++
Sbjct: 271 KLGANQISNISP--LAGLTALTNLELNE 296
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L+ L L + N S + L +LT LE L +NN++S I P + L +L L
Sbjct: 171 KPLANLTTLERLDISSNKVSDISV--LAKLTNLESLIATNNQISDITP--LGILTNLDEL 226
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
L N+ + I L+ T L++L +
Sbjct: 227 SLNGNQLK-DIG-TLASLTNLTDLDLAN 252
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 6e-10
Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ + + ++ T L + L + + L L ++ SNN+L
Sbjct: 25 EKMKTVLGKTNVTDT--VSQTDLDQVTTLQADRLGIK--SIDGVEYLNNLTQINFSNNQL 80
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ I P + L L +L+ NN+ P L+ T L+ L +
Sbjct: 81 TDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 7e-10
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L+ L+ L N + + P L LT LE LD+S+NK+S I +++L +L+ L
Sbjct: 150 SALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISV--LAKLTNLESL 204
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ NN+ P L T L EL +
Sbjct: 205 IATNNQISDITP--LGILTNLDELSLNG 230
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L+++ +L N S + P L LT++ L L++ + + + +
Sbjct: 347 SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTV 404
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQ 173
P +S +E
Sbjct: 405 KNVTGAL--IAPATISDGGSYTEPD 427
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-05
Identities = 8/73 (10%), Positives = 22/73 (30%), Gaps = 6/73 (8%)
Query: 100 LVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSI 159
+ Q + + L + L ++ + + L + L + SI
Sbjct: 7 TITQDTPINQIFT--DTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SI 61
Query: 160 PLELSRFTLLSEL 172
+ L+++
Sbjct: 62 D-GVEYLNNLTQI 73
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 1e-11
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
+ + + + + ++ LDLS N LS I +++ L+ L L +N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 154 KFEGSIPLELSRFTLLSELQ 173
E LS L+
Sbjct: 69 VLY-----ETLDLESLSTLR 83
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 1e-11
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ ++ + + SL+ LA +++ L L N S + +L TKLELL+LS+N L
Sbjct: 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL 70
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ + L +L+ L L NN + EL + L +
Sbjct: 71 YETLD--LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAAN 108
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 4e-10
Identities = 25/138 (18%), Positives = 43/138 (31%), Gaps = 13/138 (9%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ L+ L L N + + E + + L NNKL +I + +L+
Sbjct: 185 KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHF 242
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTN 208
L N F + F+ +Q T ++ G L
Sbjct: 243 DLRGNGFHCGTLRDF--FSKNQRVQTVAKQTVKKLTGQNEEECTVPT---------LGHY 291
Query: 209 GDHSCANLPGSSETHLVQ 226
G + C +LP L+
Sbjct: 292 GAYCCEDLPAPFADRLIA 309
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 1e-09
Identities = 12/85 (14%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI-IPVEISRLPSLKRL 148
+ + + L N + + + G ++++ LDL N++ + + +L+ L
Sbjct: 115 SCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQ 173
L N ++ + ++L+
Sbjct: 175 NLQYNFIY-----DVKGQVVFAKLK 194
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 2e-09
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
DL LS LR L L N+ EL +E L +NN +S + SR K +
Sbjct: 74 LDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRV---SCSRGQGKKNI 125
Query: 149 LLGNNKFEGSIPLELSRFTLLSEL 172
L NNK L+ + + L
Sbjct: 126 YLANNKITMLRDLDEGCRSRVQYL 149
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 2e-05
Identities = 9/84 (10%), Positives = 19/84 (22%), Gaps = 1/84 (1%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
K + L Q + + E + +D + +I R + L
Sbjct: 311 KRKEHALLSGQGSETER-LECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKK 369
Query: 153 NKFEGSIPLELSRFTLLSELQFDD 176
+ + L
Sbjct: 370 KALDEQVSNGRRAHAELDGTLQQA 393
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
LS L L+L N + L+ L+ L L+ + I L +LK L +
Sbjct: 72 YQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131
Query: 151 GNNKF-EGSIPLELSRFTLLSEL 172
+N +P S T L L
Sbjct: 132 AHNLIQSFKLPEYFSNLTNLEHL 154
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 6e-11
Identities = 19/100 (19%), Positives = 34/100 (34%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+ LD+ L + +L+ L L + + L+ L L L+ N +
Sbjct: 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+ S L SL++L+ + L EL
Sbjct: 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 74 QMLDMKERSLEGTLAPD-LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
++L M S + PD +L +L FL L + + P L+ L++L++++N+L
Sbjct: 448 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPL 161
+ RL SL+++ L N ++ S P
Sbjct: 508 SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 4e-10
Identities = 17/82 (20%), Positives = 29/82 (35%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
+ L L N + +L++LDLS ++ I L L L+L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 155 FEGSIPLELSRFTLLSELQFDD 176
+ S + L +L +
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVE 109
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNKLSGIIPVEISRLPS 144
T++ + L L L Q ++ + L L LD+S+ + L S
Sbjct: 387 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 145 LKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
L+ L + N F+ + ++ FT L L
Sbjct: 447 LEVLKMAGNSFQENFLPDI--FTELRNLT 473
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 5e-09
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 88 APDLGKLSDLRFLVLQKN--HFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145
A L L FL L +N F G + T L+ LDLS N + + L L
Sbjct: 340 AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQL 398
Query: 146 KRLLLGNNKFEGSIPLELSRFTLLSELQF 174
+ L ++ + + E S F L L +
Sbjct: 399 EHLDFQHSNLK-QMS-EFSVFLSLRNLIY 425
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-08
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 91 LGKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
+G L L+ L + N +P+ LT LE LDLS+NK+ I ++ L + L
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179
Query: 150 ----LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEV 183
L N I + L +L + S V
Sbjct: 180 LSLDLSLNPMN-FIQPGAFKEIRLHKLTLRNNFDSLNV 216
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 9/113 (7%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRF----LVLQKNHFSGVIPKELGELTKLELLDLS 127
++ LD+ ++ DL L + L L N + I + +L L L
Sbjct: 150 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLR 208
Query: 128 NNKLSG-IIPVEISRLPSLKRLLLGNNKFEGS---IPLELSRFTLLSELQFDD 176
NN S ++ I L L+ L +F + S L L ++
Sbjct: 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE 261
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 6e-11
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+ LS+L L + + L LT L LLD+S++ I +I+ LP + + L
Sbjct: 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143
Query: 151 GNNKFEGSIPLELSRFTLLSEL 172
N I L L L
Sbjct: 144 SYNGAITDIM-PLKTLPELKSL 164
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+ +++ L + H + P + L+ LE L + ++ +S L SL L +
Sbjct: 62 IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119
Query: 151 GNNKFEGSIPLELSRFTLLSEL 172
++ + SI +++ ++ +
Sbjct: 120 SHSAHDDSILTKINTLPKVNSI 141
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS-NNK 130
++ L + + + P+L L+ L L + + I ++ L K+ +DLS N
Sbjct: 89 NLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA 148
Query: 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIR 187
++ I+P + LP LK L + + + F L++L Y S + G +
Sbjct: 149 ITDIMP--LKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQL----YAFSQTIGGKK 197
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 20/100 (20%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-------------- 138
S + + S ++ L + L+N ++ + +E
Sbjct: 18 PDSTFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIEYAHNIKDLTINNIH 77
Query: 139 ------ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
IS L +L+RL + LS T L+ L
Sbjct: 78 ATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 8e-11
Identities = 61/301 (20%), Positives = 115/301 (38%), Gaps = 80/301 (26%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458
+ ++ VA + + KD + ++++ + L+ + H++ V G C D +P
Sbjct: 35 ECYNLSPTKDKMLVA---VKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 91
Query: 459 FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLS 518
+MVFEY +G + + L D + L M H +A S ++
Sbjct: 92 L--IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH-----IA-SQIA 143
Query: 519 SHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----DIENS-------- 554
S +YL D A + V + K+ D D+ ++
Sbjct: 144 SGMVYLASQHFVHRDLATRNCLVGANLLV---------KIGDFGMSRDVYSTDYYRVGGH 194
Query: 555 -VLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPYCEEKELS----IEKWAAD 597
+LP P + E++++SFG+++ EI + GK P+ +LS IE
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF---QLSNTEVIECITQG 251
Query: 598 Y-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
L PR C P + + +V+ C + + +QR + +I L + +
Sbjct: 252 RVLERPRV--C---P----------KEVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
Query: 657 P 657
P
Sbjct: 297 P 297
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 57/304 (18%), Positives = 114/304 (37%), Gaps = 85/304 (27%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458
L ++ VA + + K+ +S ++++ + L+ + H++ V G C + P
Sbjct: 61 ECHNLLPEQDKMLVA---VKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117
Query: 459 FNRMMVFEYAPNGTVFEHL--HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+MVFEY +G + L H + L + L + + VA
Sbjct: 118 L--LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ----VA--- 168
Query: 517 LSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----DIENS------ 554
+ +YL D A + V + + K+ D DI ++
Sbjct: 169 --AGMVYLAGLHFVHRDLATRNCLVGQGLVV---------KIGDFGMSRDIYSTDYYRVG 217
Query: 555 ---VLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPYCEEKELS----IEKWA 595
+LP P + E++++SFG+++ EI + GK P+ +LS I+
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY---QLSNTEAIDCIT 274
Query: 596 ADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
L PR C + +++ C + + +QR ++ D+ +L+ +
Sbjct: 275 QGRELERPRA--CP-------------PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319
Query: 655 ISPE 658
P
Sbjct: 320 APPV 323
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 30/165 (18%), Positives = 53/165 (32%), Gaps = 17/165 (10%)
Query: 12 FFCFLVLINNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNG 71
F L L+ + + + L N +++D L V +
Sbjct: 240 FNELLKLLRYILELSEVEFDDCTLNGLG----------DFNPSESDVVSEL-GKVETVT- 287
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
++ L + + L L+ L ++ + ++ + V L LE LDLS N +
Sbjct: 288 -IRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLM 346
Query: 132 SGII---PVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
PSL+ L+L N S+ L L
Sbjct: 347 VEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEILLTLKNLT 390
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 5e-10
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
++ LD+ + DL ++L+ L+L+ + + + L LE LDLS+N LS
Sbjct: 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 87
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
+ L SLK L L N ++ ++ + S F L+ LQ
Sbjct: 88 SLSSSWFGPLSSLKYLNLMGNPYQ-TLGVT-SLFPNLTNLQT 127
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 13/84 (15%), Positives = 31/84 (36%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
D L+ L L ++ + L + + L L ++ + ++ + L S++ L
Sbjct: 143 DFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLE 202
Query: 150 LGNNKFEGSIPLELSRFTLLSELQ 173
L + L + S ++
Sbjct: 203 LRDTNLARFQFSPLPVDEVSSPMK 226
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 2e-08
Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 1/87 (1%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
L++L+ L + I + LT L L++ L + + + L
Sbjct: 119 FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLT 178
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFDD 176
L ++ + + + + L+ D
Sbjct: 179 LHLSESAFLLEIFADILSSVRYLELRD 205
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-08
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
+ ++ L L N + + +L L++L L +++++ I L SL+ L L +N
Sbjct: 25 TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84
Query: 154 KFEGSIPLELSRFTLLSELQ 173
S+ F LS L+
Sbjct: 85 HLS-SLSSSW--FGPLSSLK 101
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 91 LGKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDLS-NNKLSGIIPVEISRLPSLKRL 148
G LS L++L L N + + + LT L+ L + S I ++ + L SL L
Sbjct: 94 FGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNEL 153
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ L + L
Sbjct: 154 EIKALSLRNYQSQSLKSIRDIHHLTLHL 181
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L L+ L + +N + L L ++ +S N+L + RL SL+++ L N
Sbjct: 450 LPRLQELYISRNKLKTLPDASL--FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN 507
Query: 154 KF 155
+
Sbjct: 508 PW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 6e-07
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 12/88 (13%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145
+ +RFL L V+ + LE+LD+SNN L LP L
Sbjct: 401 PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSF----SLFLPRL 453
Query: 146 KRLLLGNNKFEGSIPLELSRFTLLSELQ 173
+ L + NK + L +L L
Sbjct: 454 QELYISRNKLK-----TLPDASLFPVLL 476
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L +L L + +N F +P K+ L+LS+ + ++ I +L+ L + N
Sbjct: 385 TLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSN 440
Query: 153 NKFEGSIPLELSRFTLL 169
N + S L L R L
Sbjct: 441 NNLD-SFSLFLPRLQEL 456
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 92 GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151
L L + N+ L +L+ L +S NKL + S P L + +
Sbjct: 428 CIPQTLEVLDVSNNNLD-SFSLFL---PRLQELYISRNKLKTLPD--ASLFPVLLVMKIS 481
Query: 152 NNKFEGSIPLELSRFTLLSELQ 173
N+ + S+P + F L+ LQ
Sbjct: 482 RNQLK-SVPDGI--FDRLTSLQ 500
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 15/175 (8%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
L++K SL + L + D+ L L + + ++ L+ + L+L + L+
Sbjct: 151 NELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKF 193
+ + + GS+ + S LL L++ L+ E
Sbjct: 211 FQFSPLPVDEVSSPMKKLAFR--GSVLTDESFNELLKLLRYILELSEVEFDDCTL----- 263
Query: 194 GQYGFKIGEDSLHTNGDHSCANLPGSSETHL--VQHSQNLINVARRKLLEQSSNL 246
G + + + L + + Q + + +
Sbjct: 264 ------NGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKV 312
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 7e-04
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 3/85 (3%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
+ + + V E + L + L + S L +KR+
Sbjct: 257 EFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRIT 316
Query: 150 LGNNKFEGSIPLELSRFTLLSELQF 174
+ N+K +P L L+F
Sbjct: 317 VENSKVF-LVPCSF--SQHLKSLEF 338
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 1e-10
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 61 CLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTK 120
S ++ V++L + + L T+ L +L + L L N +P L L
Sbjct: 431 LENSVLKMEYADVRVLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRC 487
Query: 121 LELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEG-SIPLELSRFTLLSEL 172
LE+L S+N L + ++ LP L+ LLL NN+ + + L L L
Sbjct: 488 LEVLQASDNALENV--DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 8e-08
Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
V LD+ L L P L L L L N V + L +L+ L L NN+L
Sbjct: 464 LVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV--DGVANLPRLQELLLCNNRL 520
Query: 132 SGIIPVE-ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
++ + P L L L N ++ +L +
Sbjct: 521 QQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 1e-04
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDLSNNKLSGIIPVE---ISRLPS 144
+ L L+ L+L N + L +L LL+L N L ++ LPS
Sbjct: 502 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561
Query: 145 LKRLL 149
+ +L
Sbjct: 562 VSSIL 566
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 4e-10
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
P+L L L L L NH S + P L L+ L + +++ I L SL +
Sbjct: 201 PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260
Query: 149 LLGNNKFEGSIPLE-LSRFTLLSELQFDD 176
L +N +P + + L +
Sbjct: 261 NLAHNNLT-LLPHDLFTPLHHLERIHLHH 288
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
L L L L +NH + L L L+L +N+L+ I L LK L
Sbjct: 83 SFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFDD 176
L NN E SIP F + L+ D
Sbjct: 143 LRNNPIE-SIPSYA--FNRIPSLRRLD 166
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
LS+LR+L L + IP L L KL+ LDLS N LS I P L L++L +
Sbjct: 181 FEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238
Query: 151 GNNKFEGSIPLELSRFTLLSELQ 173
++ + I F L L
Sbjct: 239 IQSQIQ-VIERNA--FDNLQSLV 258
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 2e-07
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
++ R L L +N + L LE+L LS N + I + L +L L L +N+
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 155 FEGSIPLELSRFTLLSELQ 173
+IP F LS+L+
Sbjct: 124 LT-TIPNGA--FVYLSKLK 139
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 1e-06
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L++L L L N + + L+KL+ L L NN + I +R+PSL+RL LG
Sbjct: 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 170
Query: 154 KFEGSIPLELSRFTLLSELQF 174
K I F LS L++
Sbjct: 171 KRLSYISEGA--FEGLSNLRY 189
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 13/60 (21%), Positives = 28/60 (46%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L L+ L + ++ + L L ++L++N L+ + + L L+R+ L +N
Sbjct: 230 LMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Query: 94 LSDLRFLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
+ LR L L + S + L+ L L+L+ L IP ++ L L L L
Sbjct: 159 IPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSG 216
Query: 153 NKFEGSIPLELSRFTLLSELQ 173
N +I F L LQ
Sbjct: 217 NHLS-AIRPGS--FQGLMHLQ 234
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 4e-10
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
P+L L L L + NHF + P L+ L+ L + N+++S I L SL L
Sbjct: 212 PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVEL 271
Query: 149 LLGNNKFEGSIPLE-LSRFTLLSELQFDD 176
L +N S+P + + L EL
Sbjct: 272 NLAHNNLS-SLPHDLFTPLRYLVELHLHH 299
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 7e-08
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
L L L L +N + L L L+L +N L+ I L L+ L
Sbjct: 94 TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153
Query: 150 LGNNKFEGSIPLELSRFTLLSELQF 174
L NN E SIP F + L
Sbjct: 154 LRNNPIE-SIPSYA--FNRVPSLMR 175
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 9e-08
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L +L++L L + + L L LE L++S N I P L SLK+L +
Sbjct: 192 FEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV 249
Query: 151 GNNKFEGSIPLELSRFTLLSELQ 173
N++ I F L+ L
Sbjct: 250 MNSQVS-LIERNA--FDGLASLV 269
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
S+ R+L L +N+ + L LE+L L N + I + L SL L L +N
Sbjct: 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134
Query: 155 FEGSIPLELSRFTLLSELQ 173
IP F LS+L+
Sbjct: 135 LT-VIPSGA--FEYLSKLR 150
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 7e-07
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
LS L+ L + + S + L L L+L++N LS + + L L L L +N
Sbjct: 241 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 3e-06
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L+ L L L N + + L+KL L L NN + I +R+PSL RL LG
Sbjct: 122 LASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL 181
Query: 154 KFEGSIPLELSRFTLLSELQF 174
K I F L L++
Sbjct: 182 KKLEYISEGA--FEGLFNLKY 200
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 94 LSDLRFLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
+ L L L + + L L+ L+L + + ++ L L+ L +
Sbjct: 170 VPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM--PNLTPLVGLEELEMSG 227
Query: 153 NKFEGSIPLELSRFTLLSELQ 173
N F I F LS L+
Sbjct: 228 NHFP-EIRPGS--FHGLSSLK 245
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 8e-10
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
D L LQ N + + + L L L L NNK+S I P + L L+RL L N+
Sbjct: 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111
Query: 155 FEGSIPLELSRFTLLSELQFDD 176
+ +P ++ L EL+ +
Sbjct: 112 LK-ELPEKM--PKTLQELRVHE 130
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L L L N + V L L L L LS N +S + ++ P L+ L L NN
Sbjct: 191 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN 250
Query: 154 KFEGSIPLELSRFTLLSELQFDD 176
K +P L+ + + +
Sbjct: 251 KLV-KVPGGLADHKYIQVVYLHN 272
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 4e-08
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
L L++L L L N S V L L L L+NNKL +P ++ ++ +
Sbjct: 211 SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269
Query: 150 LGNNKFEGSIP----LELSRFTLLSELQ 173
L NN +I T +
Sbjct: 270 LHNNNIS-AIGSNDFCPPGYNTKKASYS 296
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
D L +L L+L N S + P L KLE L LS N+L +P ++ +L+ L
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELR 127
Query: 150 LGNNKFEGSIPLELSRFTLLSELQ 173
+ N+ + + F L+++
Sbjct: 128 VHENEIT-KVRKSV--FNGLNQMI 148
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL-SGIIPVEI-SRLPSLKRLLLG 151
L+ L + +N + V L ++ +++L N L S I + L + +
Sbjct: 120 PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179
Query: 152 NNKFEGSIPLELSRFTLLSELQFDD 176
+ +IP L L+EL D
Sbjct: 180 DTNIT-TIPQGL--PPSLTELHLDG 201
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 8/77 (10%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGV------IPKELGELTKLELLDLSNNKL--SGIIPV 137
+ L ++ + L N+ S + P + + L +N + I P
Sbjct: 254 KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 313
Query: 138 EISRLPSLKRLLLGNNK 154
+ + LGN K
Sbjct: 314 TFRCVYVRAAVQLGNYK 330
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 9e-10
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKEL-GELTKLELLDLSNNKLSGIIPVEISRLPS 144
T++ + L L L Q ++ + + L L LD+S+ + L S
Sbjct: 92 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 151
Query: 145 LKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
L+ L + N F+ + ++ FT L L F
Sbjct: 152 LEVLKMAGNSFQENFLPDI--FTELRNLTF 179
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 7e-09
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS--GIIPVEISRLPSLKRLLLGN 152
S L L+ N + +LT+L L LS+N LS G SLK L L
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87
Query: 153 NKFEGSIPLELSRFTLLSELQFDD 176
N ++ L L F
Sbjct: 88 NGVI-TMSSNFLGLEQLEHLDFQH 110
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 74 QMLDMKERSLEGTLAPD-LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
++L M S + PD +L +L FL L + + P L+ L++L++S+N
Sbjct: 153 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 212
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLEL--SRFTLLSELQFDD 176
+ L SL+ L N + + + L+ L
Sbjct: 213 SLDTFPYKCLNSLQVLDYSLNHIM-TSKKQELQHFPSSLAFLNLTQ 257
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 1e-09
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
D L LQ N S + + L L L L NNK+S I S L L++L + N
Sbjct: 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113
Query: 155 FEGSIPLELSRFTLLSELQFDD 176
IP L + L EL+ D
Sbjct: 114 LV-EIPPNL--PSSLVELRIHD 132
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
DL + S L L L N + L L L L L NNKLS +P + L L+ +
Sbjct: 212 DLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180
L N + + F + Y
Sbjct: 271 LHTNNIT-KVGVND--FCPVGFGVKRAYYNG 298
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
K+ L + E L + DL L L L N + ++L +KL L L +N++
Sbjct: 173 KLNYLRISEAKLT-GIPKDL--PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQI 229
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
I +S LP+L+ L L NNK +P L LL +
Sbjct: 230 RMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHT 273
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
D L L LVL N S + K L KL+ L +S N L IP + SL L
Sbjct: 73 DFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELR 129
Query: 150 LGNNKFEGSIPLELSRFTLLSELQ 173
+ +N+ +P + F+ L +
Sbjct: 130 IHDNRIR-KVPKGV--FSGLRNMN 150
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L L+ L + KNH IP L + L L + +N++ + S L ++ + +G
Sbjct: 100 PLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGG 156
Query: 153 NKFEGSIPLELSRFTLLS 170
N E + E F L
Sbjct: 157 NPLE-NSGFEPGAFDGLK 173
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 18/86 (20%), Positives = 27/86 (31%), Gaps = 4/86 (4%)
Query: 92 GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL-SGIIPVEISRLPSLKRLLL 150
S L L + N V L + +++ N L + L L +
Sbjct: 120 NLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRI 179
Query: 151 GNNKFEGSIPLELSRFTLLSELQFDD 176
K IP +L L+EL D
Sbjct: 180 SEAKLT-GIPKDL--PETLNELHLDH 202
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 6e-05
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 7/67 (10%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP------VEISRLPSLKR 147
L LR L L N S +P L +L L+++ L N ++ + +
Sbjct: 240 LPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNG 298
Query: 148 LLLGNNK 154
+ L NN
Sbjct: 299 ISLFNNP 305
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 8/77 (10%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIP------KELGELTKLELLDLSNNKLS--GIIPV 137
+ L L L+ + L N+ + V + + L NN + + P
Sbjct: 255 RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPA 314
Query: 138 EISRLPSLKRLLLGNNK 154
+ + GN K
Sbjct: 315 TFRCVTDRLAIQFGNYK 331
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 1e-09
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
P+L L L + N + LE + NN L +P E+ LP L +
Sbjct: 189 PELQNLPFLTAIYADNNSLKKLPD----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTI 242
Query: 149 LLGNNKFEGSIPLELSRFTLLS 170
NN + ++P L+
Sbjct: 243 YADNNLLK-TLPDLPPSLEALN 263
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 21/102 (20%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPK---------------ELGELTKLELLDLSNNK 130
L L L S + P EL + L+++D+ NN
Sbjct: 105 ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNS 164
Query: 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
L + PSL+ + GNN+ E +P EL L+ +
Sbjct: 165 LKKL----PDLPPSLEFIAAGNNQLE-ELP-ELQNLPFLTAI 200
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 26/107 (24%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLEL-------------------LDLSNN 129
P+L S L+ + + N +P L + + NN
Sbjct: 147 PELQNSSFLKIIDVDNNSLK-KLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNN 205
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
L + SL+ ++ GNN E +P EL L+ + D+
Sbjct: 206 SLKKLPD----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADN 246
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 21/117 (17%)
Query: 68 CLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127
CL+ + L++ L +L P+L L LV N + +P+ L L + + +
Sbjct: 68 CLDRQAHELELNNLGLS-SL-PEL--PPHLESLVASCNSLT-ELPELPQSLKSLLVDNNN 122
Query: 128 NNKLSGIIPV---------------EISRLPSLKRLLLGNNKFEGSIPLELSRFTLL 169
LS + P+ E+ LK + + NN + +P +
Sbjct: 123 LKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLPDLPPSLEFI 178
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 15/100 (15%), Positives = 27/100 (27%), Gaps = 18/100 (18%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL-------------TKLELLDLSNNKLS 132
+ + + + + P GE + L+L+N LS
Sbjct: 25 EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS 84
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+P P L+ L+ N +P L
Sbjct: 85 -SLPELP---PHLESLVASCNSLT-ELPELPQSLKSLLVD 119
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 12/89 (13%)
Query: 92 GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151
L L + N +P L +L S N L+ +P +LK+L +
Sbjct: 314 DLPPSLEELNVSNNKLI-ELPALPPRLERL---IASFNHLAE-VPELPQ---NLKQLHVE 365
Query: 152 NNKFEGSIPLELSRFTLLSELQFDDYLTS 180
N P + +L+ + +L
Sbjct: 366 YNPLR-EFPDIPES---VEDLRMNSHLAE 390
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 7e-06
Identities = 13/103 (12%), Positives = 28/103 (27%), Gaps = 21/103 (20%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLEL----------------LDLSNNKLSGIIPV 137
+L+ L ++ N P + L + L + N L P
Sbjct: 356 PQNLKQLHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR-EFPD 413
Query: 138 EISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180
S++ L + + + L + F+ +
Sbjct: 414 IPE---SVEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 33/114 (28%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGV-------------------IPKELGELTKLELLDLSNN 129
P+L L L + N + +P+ LT L++ + +
Sbjct: 231 PELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFS 290
Query: 130 KLSGIIP---------VEISRLP----SLKRLLLGNNKFEGSIPLELSRFTLLS 170
LS + P EI L SL+ L + NNK +P R L
Sbjct: 291 GLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLERLI 343
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 9e-05
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 111 IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
I T L+ ++ L+ +PVE + S +++E + P ++
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 171 ELQFDDYL 178
+ D L
Sbjct: 62 VSRLRDCL 69
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 9/79 (11%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Query: 87 LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLK 146
+ P + L+ + ++ + +P E + + ++ P +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 147 RLLLGNNKFEGSIPLELSR 165
L + + LEL+
Sbjct: 62 VSRLRDCLDRQAHELELNN 80
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 2e-09
Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 8/125 (6%)
Query: 58 STPCLWSGVRCLNGKVQMLDMKERSLEGTLA--PDLGKLS--DLRFLVLQKNHFSGVIPK 113
+ + + +L+++ S A +L + L+ L + + H +
Sbjct: 108 TGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCE 167
Query: 114 ELGELTKLELLDLSNNKLSGIIPVEIS----RLPSLKRLLLGNNKFEGSIPLELSRFTLL 169
++ L LDLS+N G + + + P+L+ L L N E + +
Sbjct: 168 QVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAAR 227
Query: 170 SELQF 174
+LQ
Sbjct: 228 VQLQG 232
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 3e-09
Identities = 24/90 (26%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Query: 80 ERSLEGTLAPDLGKLSDLRFLVLQKNHF---SGVIPKELGELTKLELLDLSNNKLSGIIP 136
ER L L P K L+ L L+ SGV +L+ LDLS+N L
Sbjct: 188 ERGLISALCP--LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245
Query: 137 VEI-SRLPSLKRLLLGNNKFEGSIPLELSR 165
L L L + +P L
Sbjct: 246 APSCDWPSQLNSLNLSFTGLK-QVPKGLPA 274
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 34/149 (22%), Positives = 49/149 (32%), Gaps = 13/149 (8%)
Query: 18 LINNLQGCWSLNLEGMALLEFRTRVISDPFGVFSN-------WNKNDSTPCLWSGVRCLN 70
+ +L+L L R + + F ++ + S +
Sbjct: 168 QVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAAR 227
Query: 71 GKVQMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNN 129
++Q LD+ SL S L L L V PK L KL +LDLS N
Sbjct: 228 VQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQV-PKGL--PAKLSVLDLSYN 284
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNKFEGS 158
+L LP + L L N F S
Sbjct: 285 RLDRN--PSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 7e-04
Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGEL---TKLELLDLSNNKLSGIIPVEISRL--P 143
D+ K L+ L ++ I + + L+ L L N +++G P + P
Sbjct: 62 TDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGP 121
Query: 144 SLKRLLLGNNKFEGSIPLELSRFTLLSE 171
L L L N + L
Sbjct: 122 DLNILNLRNVSWATRDAWLAELQQWLKP 149
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 13/92 (14%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 82 SLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISR 141
+ + + L++ + + + + + L ++ELL+L++ ++ I +
Sbjct: 32 TQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY 91
Query: 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
++++L +G N +P + F + L
Sbjct: 92 AHTIQKLYMGFNAIR-YLPPHV--FQNVPLLT 120
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 9e-09
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 74 QMLDMKERSLEGTLAPD-LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+++ K ++ L L + L L + ++ L + N +
Sbjct: 48 KIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR 106
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
+ P +P L L+L N S+P + F +L
Sbjct: 107 YLPPHVFQNVPLLTVLVLERNDLS-SLPRGI--FHNTPKLT 144
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 1e-08
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145
L + L+ L L NH + + + +LE L L +N + + ++S +L
Sbjct: 286 ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL---KLSTHHTL 341
Query: 146 KRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
K L L +N ++ + L F ++ DD
Sbjct: 342 KNLTLSHNDWDCNSLRAL--FRNVARPAVDD 370
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
++ L + N + P + L +L L N LS + P L L +
Sbjct: 89 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148
Query: 151 GNNKFEGSIPLELSRFTLLSELQ 173
NN E I + F + LQ
Sbjct: 149 SNNNLE-RIEDDT--FQATTSLQ 168
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+ L LVL++N S + KL L +SNN L I SL+ L L
Sbjct: 113 FQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQL 172
Query: 151 GNNKFEGSIPLELSRFTLLSELQFDD 176
+N+ ++LS L
Sbjct: 173 SSNRLTH---VDLSLIPSLFHANVSY 195
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 92 GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151
+L L LQ N+ + L L +DLS N+L I+ ++ L+RL +
Sbjct: 223 PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 280
Query: 152 NNKFEGSIPLELSRFTLLSEL 172
NN+ ++ L L L
Sbjct: 281 NNRLV-ALNLYGQPIPTLKVL 300
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 3e-09
Identities = 87/652 (13%), Positives = 168/652 (25%), Gaps = 223/652 (34%)
Query: 80 ERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI 139
++ +E L + FL+ P + +E D N +
Sbjct: 80 QKFVEEVLRINYK------FLM-SPIKTEQRQP-SMMTRMYIEQRDRLYNDNQVFAKYNV 131
Query: 140 SRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLT------------SAEVAGIR 187
SRL +L R L EL+ + + +V
Sbjct: 132 SRLQPYLKL----------------R-QALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174
Query: 188 SVNRKFGQYGF--KIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSN 245
V K F + + S +++ Q L+ +S +
Sbjct: 175 KVQCKMDFKIFWLNLKNCN---------------SPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 246 LAAEPATVGSSSD------------------------QVIA--------LPTSRSSGTFP 273
+ + S + L T+R
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 274 AIPTATKKHFPGPAASPPIVSAVQGSISKFNKS------SKPTSPAPSDSSESIWKYFLI 327
+ AT H + K P D +
Sbjct: 280 FLSAATTTH-------ISLDHHSMT----LTPDEVKSLLLKYLDCRPQDLPREVLT---T 325
Query: 328 IPGLFAVLIIAAAAFFTCQTRAVRTIRPWRTGLSGQLQKAFVTGVPKLNRLELDTACEDF 387
P + IIA + + W+ +L + + L E +
Sbjct: 326 NP--RRLSIIAES----IRDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
Query: 388 S----NI-IDTQSGCTIYKGTLSSGVEIAVAATAITSS---KDW------LKSQEMAYRK 433
S + I T I+ + S V + V S K + S + +
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMV-VVNKLHKYSLVEKQPKESTISIPSIYLELKV 437
Query: 434 QVDTLSRINHKNFVN----LIGYCEDDEPFNRMMVFEYAPNGTVFEHL--HIKEMDHLDW 487
+++ + H++ V+ + DD + +Y + H+ H+K ++H +
Sbjct: 438 KLENEYAL-HRSIVDHYNIPKTFDSDDLIPPY--LDQY-----FYSHIGHHLKNIEHPER 489
Query: 488 NARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTIALPK 544
R+ ++L D+ K I + A
Sbjct: 490 MTLFRM----------------------------VFL--DFRFLEQK---IRHDSTAWNA 516
Query: 545 SKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN 604
S S+L L L+ Y + + D N+P+
Sbjct: 517 S-------GSILNTLQQ------------LKF------Y--------KPYICD--NDPK- 540
Query: 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMND---IIVQ-LRQV 652
+ +++ ++ F L I E + TDL + M + I + +QV
Sbjct: 541 YERLVN-AILDF----LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 1e-07
Identities = 50/321 (15%), Positives = 93/321 (28%), Gaps = 64/321 (19%)
Query: 372 VPKLN--RLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEM 429
K N RL+ + I G L SG K W+
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLID-GVLGSG-------------KTWVALD-- 169
Query: 430 AYRKQVDTLSRINHKNF-VNLIGYCEDDEPFNRMMV---FEYAPNGTVFEHLHIKEMDHL 485
+++ K F +NL C E M+ ++ PN T +
Sbjct: 170 VCLSY-KVQCKMDFKIFWLNL-KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 486 DW--NARMRIIMGTAY--CLQYMHHELNPPVAHS-NLSSHCIYLTDDYAAKVAEICFTTI 540
R++ Y CL + + N ++ NLS + T +V +
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF--KQVTD------ 279
Query: 541 ALPKSKVSDDIENSVLPPLADPETNIYSFGILM--LEIISGKLPY--CEEKELSIEKWAA 596
L + + + L E +L+ L+ LP + A
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDE----VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE 335
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIK----TDLRQRPTMNDIIVQLRQV 652
R+ D +K + + +I+ + + R+ + + V
Sbjct: 336 SI----RDGLATWDN----WKHVNCDKLTTIIESSLNVLEPAEYRKM--FDRLSV-FPPS 384
Query: 653 INISPEQAVPRLSPLWWAELE 673
+I P LS +W+ ++
Sbjct: 385 AHI-PTI---LLSLIWFDVIK 401
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 3e-04
Identities = 54/352 (15%), Positives = 106/352 (30%), Gaps = 107/352 (30%)
Query: 364 LQKAFVTG-----VPKLNRLELDTACEDFSNII---DTQSGCTIYKGTL----SSGVEIA 411
+ AFV V + + L E+ +II D SG TL V+
Sbjct: 25 FEDAFVDNFDCKDVQDMPKSILSK--EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKF 82
Query: 412 VAATAITSSKDWLKSQ-----------EMAYRKQVDTLSRINH---KNFVNLIGYCEDDE 457
V + + +L S Y +Q D L N K V+ + +
Sbjct: 83 VE-EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL------Q 135
Query: 458 PFN--RMMVFEYAPNGTVFEH-------------------LHIKEMDHLDWNARMRIIMG 496
P+ R + E P V + K + W + +
Sbjct: 136 PYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW-----LNLK 190
Query: 497 TAYC-------LQYMHHELNPP-VAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-KV 547
LQ + ++++P + S+ SS+ A++ + + V
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-LKSKPYENCLLV 249
Query: 548 SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL--SIEKWAADYLNEPRNF 605
+++ + + +F + C K L + K D+L+
Sbjct: 250 LLNVQ--------NAKA-WNAFNL-----------SC--KILLTTRFKQVTDFLSAATTT 287
Query: 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
+D + +E++++ +C DL R+V+ +P
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP------------REVLTTNP 327
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 3e-09
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+L++ + + D+ LS LR L++ N + +LE LDLS+NKL
Sbjct: 23 TTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV 82
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
I +LK L L N F+ ++P F +S+L+F
Sbjct: 83 KIS---CHPTVNLKHLDLSFNAFD-ALP-ICKEFGNMSQLKF 119
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
S++ + V +++ LD SNN L+ + L L+ L+L
Sbjct: 298 IFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357
Query: 153 NKFEGSIPLELSRFTLLSELQ 173
N+ + + T + LQ
Sbjct: 358 NQLK-ELSKIAEMTTQMKSLQ 377
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-07
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
L + +N+ S + ++ L+KL +L +S+N++ + L+ L L +NK
Sbjct: 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80
Query: 155 FEGSIPLELSRFTLLSEL 172
I L L
Sbjct: 81 LV-KISCH--PTVNLKHL 95
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 5e-07
Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 4/123 (3%)
Query: 54 NKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPK 113
+D S + + + + + K+S L N + + +
Sbjct: 283 VVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFE 342
Query: 114 ELGELTKLELLDLSNNKLSGIIPVE--ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSE 171
G LT+LE L L N+L + + +++ SL++L + N +
Sbjct: 343 NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGD--CSWTKS 400
Query: 172 LQF 174
L
Sbjct: 401 LLS 403
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-06
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKEL-GELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151
++ L+ L + +N S K L L++S+N L+ I + P +K L L
Sbjct: 372 QMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLH 429
Query: 152 NNKFEGSIPLELSRFTLLSEL 172
+NK + SIP ++ + L EL
Sbjct: 430 SNKIK-SIPKQVVKLEALQEL 449
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 7e-06
Identities = 20/89 (22%), Positives = 28/89 (31%), Gaps = 7/89 (7%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI-IPVEISRLPSLKRLLLG 151
+L +L L N I L+ LDLS N + I E + LK L L
Sbjct: 67 FNQELEYLDLSHNKLVK-IS--CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLS 123
Query: 152 NNKFEGSIPLELSRFTLLSELQFDDYLTS 180
E + L+ + L
Sbjct: 124 TTHLEK---SSVLPIAHLNISKVLLVLGE 149
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
++ L L N IPK++ +L L+ L++++N+L + RL SL+++ L N
Sbjct: 420 PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
Query: 154 KF 155
+
Sbjct: 479 PW 480
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 3e-05
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 92 GKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+L+ L L N F + I KE G +++L+ L LS L + I+ L K LL+
Sbjct: 87 HPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLV 146
Query: 151 GNNKFEGSIPLE-LSRFTLLS 170
+ E L F S
Sbjct: 147 LGETYGEKEDPEGLQDFNTES 167
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 13/128 (10%), Positives = 34/128 (26%)
Query: 49 VFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFS 108
+ + WN L + + ++ + L L + + F
Sbjct: 230 IETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFG 289
Query: 109 GVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTL 168
+ + + + + + + + S++ L NN ++ T
Sbjct: 290 FPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTE 349
Query: 169 LSELQFDD 176
L L
Sbjct: 350 LETLILQM 357
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 4e-09
Identities = 24/104 (23%), Positives = 35/104 (33%), Gaps = 2/104 (1%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNK 130
+ L + + A L L+ L L + I KE L L +LDL ++K
Sbjct: 25 TTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84
Query: 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
+ + P L L L L L+ F L L
Sbjct: 85 IYFLHPDAFQGLFHLFELRLYFCGLS-DAVLKDGYFRNLKALTR 127
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 9e-09
Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 16/169 (9%)
Query: 13 FCFLVLINNLQGCWSLNLEGMALLEFRTRVIS-DPFGVFSNWNKNDSTPCLWSGVRCLNG 71
L I+ + + L G L+ ++ + + N +N V L
Sbjct: 371 DNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHL-- 428
Query: 72 KVQMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGE-----LTKLELLD 125
Q+L + + + L L L +N EL L+ L++L
Sbjct: 429 --QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLY 486
Query: 126 LSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
L++N L+ + P S L +L+ L L +N+ LS L + L+
Sbjct: 487 LNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-----VLSHNDLPANLEI 530
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-08
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L DL+ L L N + + + L L++L+LS N L + LP + + L
Sbjct: 286 FETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345
Query: 151 GNNKFEGSIPLELSRFTLLSELQF 174
N I + F L +LQ
Sbjct: 346 QKNHIA-IIQDQT--FKFLEKLQT 366
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 3e-07
Identities = 17/85 (20%), Positives = 32/85 (37%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+++L++ + L +L+ L L N + L K+ +DL N +
Sbjct: 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHI 350
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFE 156
+ I L L+ L L +N
Sbjct: 351 AIIQDQTFKFLEKLQTLDLRDNALT 375
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 3/158 (1%)
Query: 18 LINNLQGCWSLNLEGMALLEFRTRVISD-PFGVFSNWNKNDSTPCLWSGVRCLNGKVQML 76
L + + W + + +S + V N +++ + L +
Sbjct: 186 LYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGA 245
Query: 77 DMKERSLEGTLAPDLGKL--SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI 134
+++ L S +R L L + + L L++L+L+ NK++ I
Sbjct: 246 GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKI 305
Query: 135 IPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
L +L+ L L N ++ +
Sbjct: 306 ADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 3e-06
Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 11/130 (8%)
Query: 70 NGKVQMLDMKERSLEGTLAPD--LGKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDL 126
+ L + L + D L L L L KN + + G+L L+ +D
Sbjct: 96 LFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDF 155
Query: 127 SNNKLSGIIPVEISRL--PSLKRLLLGNNKFEGSIP------LELSRFTLLSELQFDDYL 178
S+N++ + E+ L +L L N + + R +L L
Sbjct: 156 SSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNG 215
Query: 179 TSAEVAGIRS 188
+ ++ G S
Sbjct: 216 WTVDITGNFS 225
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 5e-06
Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 15/151 (9%)
Query: 28 LNLEGMALLEFRTRVISDPFGVFSNWN--KNDSTPCLWSGVRCLNGKVQMLDMKERSLEG 85
+L +L + F N D + W+ V + ++
Sbjct: 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWT--------VDITGNFSNAISK 230
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTK--LELLDLSNNKLSGIIPVEISRLP 143
+ A L + ++ L + + LDLS+ + + L
Sbjct: 231 SQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLK 290
Query: 144 SLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
LK L L NK + F L LQ
Sbjct: 291 DLKVLNLAYNKINK---IADEAFYGLDNLQV 318
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 3e-05
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 11/83 (13%)
Query: 92 GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151
G+++ RF L + +P+ L E L LS N + + L L+ L LG
Sbjct: 6 GRIAFYRFCNLTQ------VPQVL---NTTERLLLSFNYIRTVTASSFPFLEQLQLLELG 56
Query: 152 NNKFEGSIPLELSRFTLLSELQF 174
+ +I E F L L+
Sbjct: 57 SQYTPLTIDKEA--FRNLPNLRI 77
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 8e-05
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 57 DSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG 116
T W L+ +Q+L + L L+ LR L L N + + +L
Sbjct: 467 WETELCWDVFEGLS-HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL- 524
Query: 117 ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLE 162
LE+LD+S N+L P SL L + +NKF L
Sbjct: 525 -PANLEILDISRNQLLAPNP---DVFVSLSVLDITHNKFICECELS 566
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 5e-09
Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 14/192 (7%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145
L + L+ L L NH + + + +LE L L +N + + ++S +L
Sbjct: 292 ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL---KLSTHHTL 347
Query: 146 KRLLLGNNKFEGSIPLELSRFTLLSELQFDD--------YLTSAEVAGIRSVNRKFGQYG 197
K L L +N ++ + L F ++ DD Y + S +
Sbjct: 348 KNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPYLDRLL 405
Query: 198 FKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSS 257
I S+ + + + VQ + I L+ + L AE + +
Sbjct: 406 QYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNELRAEV 465
Query: 258 DQVIALPTSRSS 269
Q+ +
Sbjct: 466 QQLTNEQIQQEQ 477
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 9e-09
Identities = 13/92 (14%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 82 SLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISR 141
+ + + L++ + + + + + L ++ELL+L++ ++ I +
Sbjct: 38 TQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY 97
Query: 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
++++L +G N +P + F + L
Sbjct: 98 AHTIQKLYMGFNAIR-YLPPHV--FQNVPLLT 126
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 3e-08
Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 4/126 (3%)
Query: 49 VFSNWNKNDSTPCLWSGVRCLN-GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHF 107
VF + + + T ++ G + +++ K ++ A L + L L
Sbjct: 28 VFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 87
Query: 108 SGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFT 167
+ ++ L + N + + P +P L L+L N S+P + F
Sbjct: 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGI--FH 144
Query: 168 LLSELQ 173
+L
Sbjct: 145 NTPKLT 150
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 4e-08
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
++ L + N + P + L +L L N LS + P L L +
Sbjct: 95 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154
Query: 151 GNNKFEGSIPLELSRFTLLSELQ 173
NN E I + F + LQ
Sbjct: 155 SNNNLE-RIEDDT--FQATTSLQ 174
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 54.2 bits (130), Expect = 1e-07
Identities = 24/92 (26%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
Query: 86 TLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPS 144
L P + + L LVL++N S + KL L +SNN L I S
Sbjct: 113 YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 172
Query: 145 LKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
L+ L L +N+ ++LS L
Sbjct: 173 LQNLQLSSNRLTH---VDLSLIPSLFHANVSY 201
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 2e-07
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 92 GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151
+L L LQ N+ + L L +DLS N+L I+ ++ L+RL +
Sbjct: 229 PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 286
Query: 152 NNKFEGSIPLELSRFTLLSEL 172
NN+ ++ L L L
Sbjct: 287 NNRLV-ALNLYGQPIPTLKVL 306
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 5e-09
Identities = 50/236 (21%), Positives = 89/236 (37%), Gaps = 46/236 (19%)
Query: 437 TLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMG 496
L + +H N V LIG C +P +V E G L E L ++++
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPI--YIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGD 221
Query: 497 TAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV- 555
A ++Y+ + H +L++ +T+ K+++ F + + + S
Sbjct: 222 AAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISD--F---GMSREEADGVYAASGG 273
Query: 556 ---LPP--LADPET---NIY-------SFGILMLEIIS-GKLPYCEEK-ELSIEKWAADY 598
+P A PE Y SFGIL+ E S G PY + + E
Sbjct: 274 LRQVPVKWTA-PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG 332
Query: 599 -LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
L P C P +A+ ++++C + QRP+ + I +L+ +
Sbjct: 333 RLPCPEL--C---P----------DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 6e-09
Identities = 13/87 (14%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145
D+ + L L N + + ++ + L L+ N ++ + ++++ L
Sbjct: 161 ITKLDVTPQTQLTTLDCSFNKITEL---DVSQNKLLNRLNCDTNNITKL---DLNQNIQL 214
Query: 146 KRLLLGNNKFEGSIPLELSRFTLLSEL 172
L +NK ++++ T L+
Sbjct: 215 TFLDCSSNKLTE---IDVTPLTQLTYF 238
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
D+ + L L N + + T+L LD S NK++ + ++S+ L RL
Sbjct: 143 DVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITEL---DVSQNKLLNRLN 197
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFDD-YLTSAEVAGIRS 188
N L+L++ L+ L LT +V +
Sbjct: 198 CDTNNITK---LDLNQNIQLTFLDCSSNKLTEIDVTPLTQ 234
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 6e-08
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ KL+ L L+ N+ + + +L + T L L +NKL+ + +++ L L L
Sbjct: 58 TGIEKLTGLTKLICTSNNITTL---DLSQNTNLTYLACDSNKLTNL---DVTPLTKLTYL 111
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
NK L++S+ LL+ L
Sbjct: 112 NCDTNKLT---KLDVSQNPLLTYLNCAR 136
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 1e-07
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
D+ + L L Q + + +L + KL L L+N +L+ + ++S LK L
Sbjct: 291 LDVTHNTQLYLLDCQAAGITEL---DLSQNPKLVYLYLNNTELTEL---DVSHNTKLKSL 344
Query: 149 LLGNNKFEGSIPLELSRFTLLSEL 172
N + + + L+
Sbjct: 345 SCVNAHIQ-DFS-SVGKIPALNNN 366
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
DL + L FL N + + ++ LT+L D S N L+ + ++S L L L
Sbjct: 207 DLNQNIQLTFLDCSSNKLTEI---DVTPLTQLTYFDCSVNPLTEL---DVSTLSKLTTLH 260
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFDD 176
++L+ T L Q +
Sbjct: 261 CIQTDLLE---IDLTHNTQLIYFQAEG 284
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
DL + L +L L + + + TKL+ L N + + ++P+L
Sbjct: 313 DLSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHIQDFSS--VGKIPALNNNF 367
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFDDYL 178
+ ++P E L+ D L
Sbjct: 368 EAEGQTI-TMPKETLTNNSLTIAVSPDLL 395
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
DL + L + + + ++ T+L LLD ++ + ++S+ P L L
Sbjct: 270 DLTHNTQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGITEL---DLSQNPKLVYLY 324
Query: 150 LGNNKFEGSIPLELSRFTLLSEL 172
L N + + +S T L L
Sbjct: 325 LNNTELT-ELD--VSHNTKLKSL 344
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
D+ L+ L +L N + + ++ + L L+ + N L+ I ++S L L
Sbjct: 101 DVTPLTKLTYLNCDTNKLTKL---DVSQNPLLTYLNCARNTLTEI---DVSHNTQLTELD 154
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFDD 176
NK L+++ T L+ L
Sbjct: 155 CHLNKK--ITKLDVTPQTQLTTLDCSF 179
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
+ V +L L LD N+ ++ + I +L L +L+ +N
Sbjct: 18 DNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDMTG--IEKLTGLTKLICTSNN 75
Query: 155 FEGSIPLELSRFTLLSELQFDD 176
L+LS+ T L+ L D
Sbjct: 76 ITT---LDLSQNTNLTYLACDS 94
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 6e-09
Identities = 57/295 (19%), Positives = 100/295 (33%), Gaps = 81/295 (27%)
Query: 399 IYKGTLSSGVEIAVAATAI-TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
G AVA I T +R + +R+ H N V L+G D+
Sbjct: 29 HLFGPAPGEQTQAVA---IKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 85
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
P M+F Y +G + E L ++ + + +A H + +
Sbjct: 86 PL--SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH-----LVA-QI 137
Query: 518 SSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----DIENS------- 554
++ YL+ D A + V + K+SD ++ +
Sbjct: 138 AAGMEYLSSHHVVHKDLATRNVLVYDKLNV---------KISDLGLFREVYAADYYKLLG 188
Query: 555 --VLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPYCEEKELS----IEKWAA 596
+LP P + +++I+S+G+++ E+ S G PYC S +E
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC---GYSNQDVVEMIRN 245
Query: 597 DY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650
L P + C P + ++ EC +RP DI +LR
Sbjct: 246 RQVLPCPDD--C---P----------AWVYALMIECWNEFPSRRPRFKDIHSRLR 285
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 58.1 bits (140), Expect = 6e-09
Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 8/111 (7%)
Query: 86 TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLE----LLDLSNNKLSGIIPVEISR 141
T P+L L L + N +P E N+++ I P I
Sbjct: 173 TFLPEL--PESLEALDVSTNLLES-LPAVPVRNHHSEETEIFFRCRENRITHI-PENILS 228
Query: 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRK 192
L ++L +N I LS+ T + S +++R
Sbjct: 229 LDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRP 279
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 22/157 (14%)
Query: 19 INNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGV-----RCLNGKV 73
INN +L + + +D F + W K + CL +
Sbjct: 7 INNN-----FSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECLINQF 61
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
L + +L +L +L + L + +N +P+ L L D +N+LS
Sbjct: 62 SELQLNRLNLS-SLPDNLPP--QITVLEITQNALI-SLPELPASLEYL---DACDNRLS- 113
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
+P SLK L + NN+ +P + ++
Sbjct: 114 TLPELP---ASLKHLDVDNNQLT-MLPELPALLEYIN 146
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 7e-06
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLR----FLVLQKNHFSGVIPKELGELTKLELLDLSNN 129
+ LD+ LE +L + F ++N + IP+ + L + L +N
Sbjct: 183 EALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDN 240
Query: 130 KLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
LS I +S+ + F S + + L++
Sbjct: 241 PLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAV 284
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 6e-05
Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 27/125 (21%)
Query: 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130
++ LD + L TL L L + N + ++P+ LE ++ NN+
Sbjct: 100 ASLEYLDACDNRLS-TLPELPASLKHLD---VDNNQLT-MLPELPA---LLEYINADNNQ 151
Query: 131 LSGIIPVEISRL-----------------PSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
L+ +P + L SL+ L + N E S+P R E +
Sbjct: 152 LTM-LPELPTSLEVLSVRNNQLTFLPELPESLEALDVSTNLLE-SLPAVPVRNHHSEETE 209
Query: 174 FDDYL 178
Sbjct: 210 IFFRC 214
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-09
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 72 KVQMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130
+Q L +++++ + + LS L L L N F + L LE+L L+
Sbjct: 55 DLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCN 114
Query: 131 L-SGIIPVEI-SRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
L ++ L SL+ L+L +N + I S F +
Sbjct: 115 LDGAVLSGNFFKPLTSLEMLVLRDNNIK-KIQPA-SFFLNMRRFH 157
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 3e-08
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 4/80 (5%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLGNN 153
+ + ++ L N + + L L+ L + +I L SL L L N
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 154 KFEGSIPLELSRFTLLSELQ 173
+F + F L+ L+
Sbjct: 90 QFL-QLETGA--FNGLANLE 106
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKEL-GELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLL 150
+L DL+FL +++ VI L+ L +L L N+ + + L +L+ L L
Sbjct: 52 RLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGAFNGLANLEVLTL 110
Query: 151 GNNKFEGSIPLELSRFTLLSELQ 173
+ L + F L+ L+
Sbjct: 111 TQCNLD-GAVLSGNFFKPLTSLE 132
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 30/145 (20%), Positives = 51/145 (35%), Gaps = 7/145 (4%)
Query: 30 LEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAP 89
+ G + + F + N D + G+ V+ D+ + + L
Sbjct: 236 IAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASG--VKTCDLSKSKIF-ALLK 292
Query: 90 DL-GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
+ +DL L L +N + + LT L L+LS N L I L L+ L
Sbjct: 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVL 352
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQ 173
L N ++ + F L L+
Sbjct: 353 DLSYNHIR-ALGDQS--FLGLPNLK 374
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L L L L NH + + L L+ L L N+L + RL SL+++ L
Sbjct: 345 NLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 404
Query: 153 NKF 155
N +
Sbjct: 405 NPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-06
Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 93 KLSDLRFLVLQKNHF-SGVIPKEL-GELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLL 149
L++L L L + + V+ LT LE+L L +N + I P + L
Sbjct: 101 GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLD 160
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFD 175
L NK + +L F
Sbjct: 161 LTFNKVKSICEEDLLNFQGKHFTLLR 186
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L +L L L N S V + L L+ L L N+++ + P L L L L
Sbjct: 149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208
Query: 151 GNNKFEGSIPLELSRFTLLSELQF 174
N ++P E L LQ+
Sbjct: 209 FANNLS-ALPTEA--LAPLRALQY 229
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
+ + + L N S V L +L L +N L+ I + L L++L L +N
Sbjct: 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91
Query: 155 FEGSIPLELSRFTLLSELQ 173
S+ F L L
Sbjct: 92 QLRSVDPAT--FHGLGRLH 108
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 6e-08
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L+ L++L LQ N + +L L L L N++S + L SL RLLL
Sbjct: 125 FRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Query: 151 GNNKFEGSIPLELSRFTLLSELQ 173
N+ + F L L
Sbjct: 185 HQNRVA-HVHPHA--FRDLGRLM 204
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 8e-08
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L L L L + + P L L+ L L +N L + L +L L L N
Sbjct: 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163
Query: 154 KFEGSIPLELSRFTLLSELQ 173
+ S+P F L L
Sbjct: 164 RIS-SVPERA--FRGLHSLD 180
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L L L+L +N + V P +L +L L L N LS + ++ L +L+ L L +
Sbjct: 175 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234
Query: 153 N 153
N
Sbjct: 235 N 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 4/101 (3%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
Q + + + A +L L L N + + L LE LDLS+N
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 134 IIPVEI-SRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
+ L L L L + + L F L+ LQ
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQ-ELGPGL--FRGLAALQ 132
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 8e-09
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L LS+L+ L L N + + P L LT L+ L + N ++S + P ++ L L L
Sbjct: 123 TPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTL 178
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
+NK I L+ L E+ +
Sbjct: 179 KADDNKIS-DIS-PLASLPNLIEVHLKN 204
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L+ + L L N V + L ++ LDL++ +++ + P ++ L +L+ L
Sbjct: 79 APLKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVL 134
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQFDD 176
L N+ +I L+ T L L +
Sbjct: 135 YLDLNQIT-NIS-PLAGLTNLQYLSIGN 160
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 4e-07
Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 8/105 (7%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ + ++ T L + L + + + + L L L+L +N++
Sbjct: 20 NAIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQI 75
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ + P + L + L L N + ++ ++ + L
Sbjct: 76 TDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTS 116
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L L +L + L+ N S V P L + L ++ L+N ++ + L
Sbjct: 189 SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVVP--N 244
Query: 149 LLGNNKFEGSIPLELS 164
++ P +S
Sbjct: 245 VVKGPSGAPIAPATIS 260
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 44/255 (17%), Positives = 88/255 (34%), Gaps = 54/255 (21%)
Query: 420 SKDWLKSQEMA-YRKQVDTLSRINHKNF--VNLIGYCEDDEPFNRMMVFEYAPNGTVFEH 476
+ + +Q + YR ++ L+++ + + L Y D+ MV E N +
Sbjct: 89 NLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY--MVMECG-NIDLNSW 145
Query: 477 LHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS-----NLSSHCIYLTDDYAAK 531
+K+ +D R + +H + HS N L D K
Sbjct: 146 --LKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANF------LIVDGMLK 194
Query: 532 VAEICF-------TTIALPKSKV--------------SDDIENSVLPPLADPETNIYSFG 570
+ + TT + S+V S EN P+++++S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 571 ILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKE 630
++ + GK P+ + + A N F + + L+ +K
Sbjct: 255 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV-----------LKC 303
Query: 631 CIKTDLRQRPTMNDI 645
C+K D +QR ++ ++
Sbjct: 304 CLKRDPKQRISIPEL 318
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 44/266 (16%), Positives = 90/266 (33%), Gaps = 85/266 (31%)
Query: 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT 497
++ ++ N V L+G C +P ++FEY G + E L + +
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPM--CLLFEYMAYGDLNEFLRSMSPHTVCSLSH-----SD 156
Query: 498 AYCLQYMHHELNPPVAHSNLSSHCI-------YLTD------DYAAK---VAE--ICFTT 539
+ PP++ + YL++ D A + V E +
Sbjct: 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVV--- 213
Query: 540 IALPKSKVSD-----DI---------ENSVLP-----P--LAD----PETNIYSFGILML 574
K++D +I N +P P + E++++++G+++
Sbjct: 214 ------KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW 267
Query: 575 EIIS-GKLPYCEEKELSIEKWAADYLNE------PRNFSCMIDPSLKSFKQNELEAICEV 627
EI S G PY ++ E+ Y+ + P N C + +
Sbjct: 268 EIFSYGLQPYY---GMAHEE-VIYYVRDGNILACPEN--CP-------------LELYNL 308
Query: 628 IKECIKTDLRQRPTMNDIIVQLRQVI 653
++ C RP+ I L+++
Sbjct: 309 MRLCWSKLPADRPSFCSIHRILQRMC 334
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 44/255 (17%), Positives = 88/255 (34%), Gaps = 54/255 (21%)
Query: 420 SKDWLKSQEMA-YRKQVDTLSRINHKNF--VNLIGYCEDDEPFNRMMVFEYAPNGTVFEH 476
+ + +Q + YR ++ L+++ + + L Y D+ MV E N +
Sbjct: 42 NLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY--MVMECG-NIDLNSW 98
Query: 477 LHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS-----NLSSHCIYLTDDYAAK 531
+K+ +D R + +H + HS N L D K
Sbjct: 99 --LKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANF------LIVDGMLK 147
Query: 532 VAEICF-------TTIALPKSKV--------------SDDIENSVLPPLADPETNIYSFG 570
+ + TT + S+V S EN P+++++S G
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207
Query: 571 ILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKE 630
++ + GK P+ + + A N F + + L+ +K
Sbjct: 208 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV-----------LKC 256
Query: 631 CIKTDLRQRPTMNDI 645
C+K D +QR ++ ++
Sbjct: 257 CLKRDPKQRISIPEL 271
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 43/275 (15%), Positives = 103/275 (37%), Gaps = 50/275 (18%)
Query: 425 KSQEMAYRKQVDTLSRI-NHKNFVNLIGYC-----EDDEPFNRMMVFEYAPNGTVFEHL- 477
+ + A ++V + ++ H N V E D ++ G + E L
Sbjct: 66 EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK 125
Query: 478 HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA---- 533
++ L + ++I T +Q+MH PP+ H +L + L++ K+
Sbjct: 126 KMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184
Query: 534 ------EICFTTIALPKSKVSDDIENSVLPPLADPE-------------TNIYSFGILML 574
++ A ++ V ++I + P PE +I++ G ++
Sbjct: 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
Query: 575 EIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKT 634
+ + P+ + +L I Y + P + + S I+ ++
Sbjct: 245 LLCFRQHPFEDGAKLRIVN--GKY-SIPPHDT--QYTVFHSL-----------IRAMLQV 288
Query: 635 DLRQRPTMNDIIVQLRQVI---NISPEQAVPRLSP 666
+ +R ++ +++ QL+++ N++P+ + L
Sbjct: 289 NPEERLSIAEVVHQLQEIAAARNVNPKSPITELLE 323
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+ +L FL + + L +L KL+ L+LS+N++SG + V + P+L L L
Sbjct: 38 TDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95
Query: 151 GNNKFEG-SIPLELSRFTLLSEL 172
NK + S L + L L
Sbjct: 96 SGNKIKDLSTIEPLKKLENLKSL 118
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 7e-08
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFS-GVIPKELGELTKLELLDLSNNKLSGI 134
++M R L SD++ LVL + + G + E +LE L N L+ I
Sbjct: 1 MEMGRRI---HLELRNRTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI 57
Query: 135 IPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+ +L LK+L L +N+ G + + + L+ L
Sbjct: 58 AN--LPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 4e-06
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLKRL 148
+L KL+ L+ L L N SG + + L L+LS NK+ + +E + +L +LK L
Sbjct: 59 NLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118
Query: 149 LLGNN 153
L N
Sbjct: 119 DLFNC 123
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 3e-08
Identities = 62/304 (20%), Positives = 109/304 (35%), Gaps = 86/304 (28%)
Query: 400 YKGTLSS-GVEIAVAA---TAITSSKDWLK-SQEMAYRKQVDTLSRINHKNFVNLIGYCE 454
K + G+ + A S D + E+ ++ +H N +NL+G CE
Sbjct: 42 LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACE 96
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
+ EYAP+G + + L + D + + Q + H A
Sbjct: 97 HRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH-----FAA 149
Query: 515 SNLSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----DIE------ 552
+++ YL+ D AA+ V E + K++D E
Sbjct: 150 -DVARGMDYLSQKQFIHRDLAARNILVGENYVA---------KIADFGLSRGQEVYVKKT 199
Query: 553 NSVLP-----P--LADPETNIY-------SFGILMLEIIS-GKLPYC--EEKELSIEKWA 595
LP L ++Y S+G+L+ EI+S G PYC EL EK
Sbjct: 200 MGRLPVRWMAIESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-YEKLP 255
Query: 596 ADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
Y L +P N C + + +++++C + +RP+ I+V L +++
Sbjct: 256 QGYRLEKPLN--C-------------DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300
Query: 655 ISPE 658
Sbjct: 301 ERKT 304
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 45/232 (19%), Positives = 91/232 (39%), Gaps = 46/232 (19%)
Query: 437 TLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMG 496
+ I H N V L+G C + PF ++ E+ G + ++L + + +
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 326
Query: 497 TAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----E 552
+ ++Y+ + N H NL++ + +++ KVA+ + + ++ D
Sbjct: 327 ISSAMEYL-EKKN--FIHRNLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 377
Query: 553 NSVLP-PLADPETNIY----------SFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
+ P PE+ Y +FG+L+ EI + G PY + ++ E DY
Sbjct: 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDY 436
Query: 599 -LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
+ P C P E + E+++ C + + RP+ +I
Sbjct: 437 RMERPEG--C---P----------EKVYELMRACWQWNPSDRPSFAEIHQAF 473
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 3e-08
Identities = 44/255 (17%), Positives = 88/255 (34%), Gaps = 54/255 (21%)
Query: 420 SKDWLKSQEMA-YRKQVDTLSRINHKNF--VNLIGYCEDDEPFNRMMVFEYAPNGTVFEH 476
+ + +Q + YR ++ L+++ + + L Y D+ MV E N +
Sbjct: 61 NLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY--MVMECG-NIDLNSW 117
Query: 477 LHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS-----NLSSHCIYLTDDYAAK 531
+K+ +D R + +H + HS N L D K
Sbjct: 118 --LKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANF------LIVDGMLK 166
Query: 532 VAEICF-------TTIALPKSKV--------------SDDIENSVLPPLADPETNIYSFG 570
+ + TT + S+V S EN P+++++S G
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 571 ILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKE 630
++ + GK P+ + + A N F + + L+ +K
Sbjct: 227 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV-----------LKC 275
Query: 631 CIKTDLRQRPTMNDI 645
C+K D +QR ++ ++
Sbjct: 276 CLKRDPKQRISIPEL 290
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Query: 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128
+ + ++LD+ + ++ + L L L +N S V P L L L L +
Sbjct: 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89
Query: 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
N+L I + L +L +L + NK + + F L L+
Sbjct: 90 NRLKLIPLGVFTGLSNLTKLDISENKIV-ILLDYM--FQDLYNLK 131
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+ L LRFL L N S + L EL +L+ + L +L+ + P L L+ L +
Sbjct: 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 303
Query: 151 GNNKFEGSIPLELSRFTLLSELQ 173
N+ ++ + F + L+
Sbjct: 304 SGNQLT-TLEESV--FHSVGNLE 323
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 5e-08
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L +LR L L+ N + L+ L LD+S NK+ ++ L +LK L +G+N
Sbjct: 79 LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN 138
Query: 154 KFEGSIPLELSRFTLLSELQ 173
I F+ L+ L+
Sbjct: 139 DLV-YISHRA--FSGLNSLE 155
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 7e-08
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L L L L L+ + + + L +L++L++S+ + +L L +
Sbjct: 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSI 231
Query: 151 GNNKFEGSIPLELSRFTLLSELQF 174
+ ++P L L+F
Sbjct: 232 THCNLT-AVPYLA--VRHLVYLRF 252
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 7e-08
Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 3/100 (3%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
+L ++ ++ +L L+ L + + + L L +++ L+
Sbjct: 179 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA 238
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
+ + + L L+ L L N +E S L LQ
Sbjct: 239 VPYLAVRHLVYLRFLNLSYNPIST---IEGSMLHELLRLQ 275
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
LS+L L + +N ++ +L L+ L++ +N L I S L SL++L L
Sbjct: 103 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162
Query: 154 KFEGSIPLELSRFTLLSELQ 173
SIP E + L L
Sbjct: 163 NLT-SIPTEA--LSHLHGLI 179
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 18/83 (21%), Positives = 34/83 (40%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L+ L L L+K + + + + L L L +L L + ++ I RL LK L + +
Sbjct: 151 LNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210
Query: 154 KFEGSIPLELSRFTLLSELQFDD 176
+ ++ L+ L
Sbjct: 211 PYLDTMTPNCLYGLNLTSLSITH 233
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 7/114 (6%)
Query: 60 PCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELT 119
+ + L ++L++ T+ P+ +L L + + + V + L
Sbjct: 193 DYSFKRLYRL----KVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLV 248
Query: 120 KLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
L L+LS N +S I + L L+ + L + + F L+ L+
Sbjct: 249 YLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLA-VVEPYA--FRGLNYLR 299
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 19/84 (22%), Positives = 29/84 (34%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L +L+ L + N + + L LE L L L+ I +S L L L L +
Sbjct: 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186
Query: 154 KFEGSIPLELSRFTLLSELQFDDY 177
R L L+ +
Sbjct: 187 NINAIRDYSFKRLYRLKVLEISHW 210
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L L+ + L + V P L L +L++S N+L+ + + +L+ L+L +N
Sbjct: 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330
Query: 154 KF 155
Sbjct: 331 PL 332
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-08
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFS-GVIPKELGELTKLELLDLSNNKLSGI 134
+DMK R L + +R LVL + G I E LE L L N L +
Sbjct: 8 MDMKRRI---HLELRNRTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV 64
Query: 135 IPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSEL 172
+ +LP LK+L L N+ G + + + L+ L
Sbjct: 65 SN--LPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-08
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+ +L FL L V L +L KL+ L+LS N++ G + + +LP+L L L
Sbjct: 45 TAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102
Query: 151 GNNKFEGSIPLE-LSRFTLLSEL 172
NK + LE L + L L
Sbjct: 103 SGNKLKDISTLEPLKKLECLKSL 125
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLKRL 148
+L KL L+ L L +N G + +L L L+LS NKL I +E + +L LK L
Sbjct: 66 NLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125
Query: 149 LLGNN 153
L N
Sbjct: 126 DLFNC 130
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 55.0 bits (132), Expect = 4e-08
Identities = 28/231 (12%), Positives = 68/231 (29%), Gaps = 40/231 (17%)
Query: 435 VDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA--PNGTVFEHL--HIKEMDHLDWNAR 490
D + K + + D +R ++ T E L H L +AR
Sbjct: 149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHAR 208
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNL--------SSHCIYLTD----DYAAKVAEICFT 538
+++ + L +HH + H+ L ++LT +
Sbjct: 209 LQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS 265
Query: 539 TIALP---KSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595
P +++ + + L + ++ G+++ I LP ++ L +W
Sbjct: 266 RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW- 324
Query: 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
+N +++ ++ ++ R +
Sbjct: 325 --IFRSCKNIP----QPVRAL-----------LEGFLRYPKEDRLLPLQAM 358
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
DL + +L+ LVL N + + L LE LDLS N LS + L SL L
Sbjct: 71 DLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFDDYL 178
L N ++ ++ E S F+ L++LQ
Sbjct: 131 LLGNPYK-TLG-ETSLFSHLTKLQILRVG 157
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
D L+ L L + + PK L + + L L + ++ + + S++ L
Sbjct: 169 DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLE 228
Query: 150 LGNNKFEGSIPLELSRFTLLSELQFD 175
L + L+ F+ LS + +
Sbjct: 229 LRDT------DLDTFHFSELSTGETN 248
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 4e-07
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
++ L L N + + +L L+ L L++N ++ I S L SL+ L L N
Sbjct: 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNY 111
Query: 155 FEGSIPLELSRFTLLSELQ 173
++ F LS L
Sbjct: 112 LS-NLSSSW--FKPLSSLT 127
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 6e-07
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 81 RSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEIS 140
L L K R + + + K L +++ L L+ S N+L +
Sbjct: 240 SELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFD 298
Query: 141 RLPSLKRLLLGNNKF 155
RL SL+++ L N +
Sbjct: 299 RLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEIS--------RL 142
L + ++ L+L ++ + + +E L+L + L E+S +
Sbjct: 194 LKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKK 253
Query: 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+ + + + + + L++ + L EL+F
Sbjct: 254 FTFRNVKITDESLF-QVMKLLNQISGLLELEFSR 286
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L D + S L + + +++ L ++ + ++++ L L N
Sbjct: 229 LRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKL-LNQISGLLELEFSRN 287
Query: 154 KFEGSIPLELSRFTLLSELQ 173
+ + S+P + F L+ LQ
Sbjct: 288 QLK-SVPDGI--FDRLTSLQ 304
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKEL-GELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLL 150
LS L FL L N + + L LTKL++L + N I + + L L+ L +
Sbjct: 122 PLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEI 181
Query: 151 GNNKFEGSIPLE-LSRFTLLSELQFDD 176
+ + S + L +S L
Sbjct: 182 DASDLQ-SYEPKSLKSIQNVSHLILHM 207
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 5e-08
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L L L+ L L+ N S + L L +LE L L NNK++ I +SRL L L L
Sbjct: 108 LKDLKKLKSLSLEHNGISDING--LVHLPQLESLYLGNNKITDITV--LSRLTKLDTLSL 163
Query: 151 GNNKFEGSIPLELSRFTLLSEL 172
+N+ I L+ T L L
Sbjct: 164 EDNQIS-DIV-PLAGLTKLQNL 183
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ ++K++S+ +L+ + ++ + V + + L + L L+ NKL
Sbjct: 25 ETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKL 80
Query: 132 SGIIPVEISRLPSLKRLLLGNNK 154
+ I P ++ L +L L L NK
Sbjct: 81 TDIKP--LANLKNLGWLFLDENK 101
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 5e-08
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 20/97 (20%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLEL-----------------LDLSNNKLSGIIP 136
S L+ L++ N + +P EL +L + L + N+L+ +P
Sbjct: 220 PSGLKELIVSGNRLTS-LPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQLTR-LP 277
Query: 137 VEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
+ L S + L N L+ R +
Sbjct: 278 ESLIHLSSETTVNLEGNPLS-ERTLQALREITSAPGY 313
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 31/128 (24%)
Query: 67 RCLNGKVQMLDMKERSLEGTLAPDLGK------------------LSDLRFLVLQKNHFS 108
CLN +L++ E L TL L +LR L + N +
Sbjct: 36 ACLNNGNAVLNVGESGLT-TLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLT 94
Query: 109 GVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTL 168
+P L +L + L + L +L + N+ S+P+
Sbjct: 95 -SLPVLPPGLLELSIFSNPLTHLPAL-------PSGLCKLWIFGNQLT-SLPVLPPG--- 142
Query: 169 LSELQFDD 176
L EL D
Sbjct: 143 LQELSVSD 150
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 5e-06
Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 2/89 (2%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
S L L + +N + +P+ L L+ ++L N LS + + S
Sbjct: 260 PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPII 318
Query: 154 KFEGSIPLELSRFTLLSELQFDDYLTSAE 182
+F+ + L D+L A
Sbjct: 319 RFDMAGASAPRETRALHLAAA-DWLVPAR 346
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 8e-06
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
S L+ L + N + +P EL KL NN+L+ +P S LK L++ N
Sbjct: 180 PSGLQELSVSDNQLA-SLPTLPSELYKLWAY---NNRLTS-LPALPS---GLKELIVSGN 231
Query: 154 KFEGSIPLELSRFTLLS 170
+ S+P+ S L
Sbjct: 232 RLT-SLPVLPSELKELM 247
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 6e-08
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ ++K++S+ +L+ + ++ + V + + L + L L+ NKL
Sbjct: 22 ETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKL 77
Query: 132 SGIIPVEISRLPSLKRLLLGNNK 154
+ I P ++ L +L L L NK
Sbjct: 78 TDIKP--LTNLKNLGWLFLDENK 98
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 52.8 bits (126), Expect = 3e-07
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L L L L L N + + L LTKL+ L L +N++S I+P ++ L L+ L L
Sbjct: 127 LVHLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 182
Query: 151 GNNKFEGSIPLELSRFTLLSELQFDD 176
N + L+ L L+
Sbjct: 183 SKNHIS-DLR-ALAGLKNLDVLELFS 206
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 2e-06
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+ L ++ L L N + + P L L L L L NK+ + + L LK L L
Sbjct: 61 IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLSS--LKDLKKLKSLSL 116
Query: 151 GNNKFEGSIPLELSRFTLLSEL 172
+N I L L L
Sbjct: 117 EHNGIS-DIN-GLVHLPQLESL 136
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 7e-08
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
+L++L L+L NH + + + + L LDLS+N L + S L +L+ LL
Sbjct: 59 TPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118
Query: 150 LGNNKFEGSIPLELSRFTLLSELQ 173
L NN + F +++LQ
Sbjct: 119 LYNNHIV-VVDRNA--FEDMAQLQ 139
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 8e-07
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP---VEISRLPSLKRLL 149
L L L+L NH V ++ +L+ L LS N++S + ++LP L L
Sbjct: 110 DLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLD 169
Query: 150 LGNNKFEGSIPLELSRFTLLSELQ 173
L +NK + +PL L
Sbjct: 170 LSSNKLK-KLPLTD--LQKLPAWV 190
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 93 KLSDLRFLVLQKNHFSGVIP---KELGELTKLELLDLSNNKLSGIIPVEISRLPSLKR-- 147
++ L+ L L +N S K+ +L KL LLDLS+NKL + ++ +LP+ +
Sbjct: 134 DMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNG 193
Query: 148 LLLGNN 153
L L NN
Sbjct: 194 LYLHNN 199
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 8e-08
Identities = 51/301 (16%), Positives = 102/301 (33%), Gaps = 93/301 (30%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMA-YRKQVDTLSRINHKNFVNLIGYCEDDE 457
+ KG + E VA I + + +E + + + N + V L+G +
Sbjct: 45 VAKGVVKDEPETRVA---IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMG--TAYCLQYMHHELNPPVAHS 515
P +++ E G + +L + + +
Sbjct: 102 PT--LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE------------- 146
Query: 516 NLSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----DIENS----- 554
++ YL D AA+ VAE K+ D DI +
Sbjct: 147 -IADGMAYLNANKFVHRDLAARNCMVAEDFTV---------KIGDFGMTRDIYETDYYRK 196
Query: 555 ----VLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADY 598
+LP P L D ++++SFG+++ EI + + PY LS E+ +
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GLSNEQ-VLRF 252
Query: 599 LNE------PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+ E P N + + E+++ C + + + RP+ +II +++
Sbjct: 253 VMEGGLLDKPDNCP---------------DMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297
Query: 653 I 653
+
Sbjct: 298 M 298
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 72 KVQMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130
K++ +D+ + LAPD L L LVL N + + L L+LL L+ NK
Sbjct: 57 KLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANK 115
Query: 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
++ + L +L L L +NK + +I F+ L +Q
Sbjct: 116 INCLRVDAFQDLHNLNLLSLYDNKLQ-TIAKGT--FSPLRAIQ 155
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L L+ L+L N + + +L L LL L +NKL I S L +++ + L
Sbjct: 102 GLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 161
Query: 153 N 153
N
Sbjct: 162 N 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
+ + L++N + P KL +DLSNN++S + P L SL L+L NK
Sbjct: 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91
Query: 155 FEGSIPLELSRFTLLSELQ 173
+P L F L LQ
Sbjct: 92 IT-ELPKSL--FEGLFSLQ 107
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
LR + L N S + P L L L L NK++ + L SL+ LLL
Sbjct: 54 PYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNA 113
Query: 153 NKFEGSIPLELSRFTLLSELQ 173
NK + ++ F L L
Sbjct: 114 NKIN-CLRVDA--FQDLHNLN 131
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
LS L L+L N + L+ L+ L L+ + I L +LK L + +
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133
Query: 153 NKFEGSIPLELSRFTLLSELQ 173
N + S L F+ L+ L+
Sbjct: 134 NLIQ-SFKLP-EYFSNLTNLE 152
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLGNN 153
+ L L N + +L++LDLS ++ I L L L+L N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN 86
Query: 154 KFEGSIPLELSRFTLLSELQ 173
+ S+ L F+ LS LQ
Sbjct: 87 PIQ-SLALGA--FSGLSSLQ 103
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 92 GKLSDLRFLVLQKNHFSGVIPKEL-GELTKLELLDLSNNKLSGIIPVEISRLPSLK---- 146
G L L+ L + N E LT LE LDLS+NK+ I ++ L +
Sbjct: 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180
Query: 147 RLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
L L N I + L EL D
Sbjct: 181 SLDLSLNPMN-FIQPGAFKEIRLKELALDT 209
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLEL----LDLSNNKLSGIIPVEISRLPSLKRL 148
L++L L L N + +L L ++ L LDLS N ++ I + LK L
Sbjct: 147 NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI-QPGAFKEIRLKEL 205
Query: 149 LLGNNKFEGSIPLELSRFTLLSELQF 174
L N+ + S+P + F L+ LQ
Sbjct: 206 ALDTNQLK-SVPDGI--FDRLTSLQK 228
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 52.8 bits (126), Expect = 2e-07
Identities = 25/118 (21%), Positives = 38/118 (32%), Gaps = 14/118 (11%)
Query: 61 CLW-SGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKE-LGEL 118
SG+RC +L L +L L ++ + L L
Sbjct: 7 PHGSSGLRCTR----------DGALDSL-HHLPGAENLTELYIENQQHLQHLELRDLRGL 55
Query: 119 TKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
+L L + + L + P P L RL L N E S+ + + L EL
Sbjct: 56 GELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSG 112
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 3e-06
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149
DL L +LR L + K+ V P +L L+LS N L + + + SL+ L+
Sbjct: 51 DLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELV 109
Query: 150 LGNNKF 155
L N
Sbjct: 110 LSGNPL 115
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 44/251 (17%), Positives = 90/251 (35%), Gaps = 47/251 (18%)
Query: 439 SRINHKNFVNLIGYCEDDEPFNRM--MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMG 496
+ +NH V + E + P + +V EY T+ + + + + +I
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDI--VHTEGPMTPKRAIEVIAD 124
Query: 497 TAYCLQYMHHELNPPVAHSNLSSHC------IYLTDDYAAKVAE--ICFTTIALPKSKVS 548
L + +H N H I ++ A KV + I A+ S S
Sbjct: 125 ACQALNF---------SHQNGIIHRDVKPANIMISATNAVKVMDFGIA---RAIADSGNS 172
Query: 549 DDIENSV------LPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596
+V L P D +++YS G ++ E+++G+ P+ + +S+ A
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV---AY 229
Query: 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP-TMNDIIVQLRQVINI 655
++ E + + + V+ + + + R T ++ L +V N
Sbjct: 230 QHVREDP-------IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282
Query: 656 SPEQAVPRLSP 666
P +A L+
Sbjct: 283 EPPEAPKVLTD 293
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 2e-07
Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 48/237 (20%)
Query: 439 SRINHKNFVNLIGYCEDDE-PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT 497
S+++H+N V++I E+D+ + +V EY T+ E+ I+ L + +
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYY---LVMEYIEGPTLSEY--IESHGPLSVDTAINFTNQI 120
Query: 498 AYCLQYMHHELNPPVAHSNLSSHC------IYLTDDYAAKVAEICFTTIALPKSKVSDDI 551
+++ AH H I + + K+ + F IA S+ S
Sbjct: 121 LDGIKH---------AHDMRIVHRDIKPQNILIDSNKTLKIFD--FG-IAKALSETSLTQ 168
Query: 552 ENSV------LPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYL 599
N V P D T+IYS GI++ E++ G+ P+ E +SI A ++
Sbjct: 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI---AIKHI 225
Query: 600 NEPRNFSCMIDPSLKSFKQNEL-EAICEVIKECIKTDLRQRP-TMNDIIVQLRQVIN 654
+ P++ + + ++ +++ VI + D R T+ ++ L V++
Sbjct: 226 QDS-------VPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-07
Identities = 30/253 (11%), Positives = 80/253 (31%), Gaps = 62/253 (24%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM 491
+ ++ ++ I ++ + G + + +++EY N ++ + + ++ +
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 492 ------RIIMGTAYCLQYMHHELNPPVAH-----SNL---SSHCIYLTD----------- 526
II Y+H+E N + H SN+ + + L+D
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 527 --------DYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS 578
++ E ++ S + + +I+S GI + +
Sbjct: 207 IKGSRGTYEFMP--PEFF-------SNESSYN----------GAKVDIWSLGICLYVMFY 247
Query: 579 GKLPYCEEKELS--IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICE----VIKECI 632
+P+ + L + P + + + P + +K +
Sbjct: 248 NVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFL 307
Query: 633 KTDLRQRPTMNDI 645
+ + +R T D
Sbjct: 308 RKNPAERITSEDA 320
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 3e-07
Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 51/233 (21%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLD-WNAR 490
R++V+ S + H N + L GY D ++ EYAP GTV+ L +++ D
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 491 M---RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
+ +YC H V H ++ + L K+A+ + S
Sbjct: 113 TYITELANALSYC-----HSKR--VIHRDIKPENLLLGSAGELKIADFGW-------SVH 158
Query: 548 SDDIENSV-------LPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSI-EK 593
+ + LPP + D + +++S G+L E + GK P+ ++
Sbjct: 159 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
+ P + + I +K + QRP + +++
Sbjct: 219 ISRVEFTFPDFVT----EGARDL-----------ISRLLKHNPSQRPMLREVL 256
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-07
Identities = 51/317 (16%), Positives = 108/317 (34%), Gaps = 102/317 (32%)
Query: 400 YKGTL--SSGVEIAVA-------ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
+ L G + VA A + +++L +E A + +H + L+
Sbjct: 40 REAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL--REAA------CMKEFDHPHVAKLV 91
Query: 451 GYCEDDEPFNR----MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHH 506
G R M++ + +G + L + +N ++ ++ + +
Sbjct: 92 GVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR--FMVD---- 145
Query: 507 ELNPPVAHSNLSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----D 550
++ YL+ D AA+ +AE V+D
Sbjct: 146 ----------IACGMEYLSSRNFIHRDLAARNCMLAEDMTV---------CVADFGLSRK 186
Query: 551 IENS---------VLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPYC--EEK 587
I + LP LAD +++++FG+ M EI++ G+ PY E
Sbjct: 187 IYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA 246
Query: 588 ELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
E+ L +P C +E + +++ +C D +QRP+ +
Sbjct: 247 EI-YNYLIGGNRLKQPPE--C-------------MEEVYDLMYQCWSADPKQRPSFTCLR 290
Query: 647 VQLRQVINISPEQAVPR 663
++L ++ + +
Sbjct: 291 MELENILGHLSVLSTSQ 307
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 5e-07
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 74 QMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS 132
+ LD+ SL + L L N +G + + L K+++LDL NN++
Sbjct: 406 ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--PPKVKVLDLHNNRIM 463
Query: 133 GIIPVEISRLPSLKRLLLGNNKFEGSIPLE-LSRFTLLSELQ 173
IP +++ L +L+ L + +N+ + S+P R T L +
Sbjct: 464 -SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIW 503
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 6e-06
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 97 LRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKF 155
++ L L N IPK++ L L+ L++++N+L + RL SL+ + L +N +
Sbjct: 452 VKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 2e-05
Identities = 22/84 (26%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI-IPVEISRLPSLKRLLLG 151
DL +L + N I + L LDLS N + + E L L L L
Sbjct: 98 FNQDLEYLDVSHNRLQN-IS--CCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLS 154
Query: 152 NNKFEGSIPLELSRFTLLSELQFD 175
KF + L LS + D
Sbjct: 155 AAKFR-QLDLLPVAHLHLSCILLD 177
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 12/84 (14%), Positives = 29/84 (34%), Gaps = 1/84 (1%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
+++ +L + + + L+ + N + + S L L+ L+L
Sbjct: 327 VFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQR 386
Query: 153 NKFEGSIPLELSRFTLLSELQFDD 176
N + + +S L+ D
Sbjct: 387 NGLK-NFFKVALMTKNMSSLETLD 409
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 8e-05
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
+ L L +N S + ++ L++L +L LS+N++ + L+ L + +N+
Sbjct: 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNR 111
Query: 155 FEGSIPLELSRFTLLSEL 172
+ +I L L
Sbjct: 112 LQ-NIS--CCPMASLRHL 126
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 5e-07
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLG 151
L +L+ L L+ N + P L KLE L L+NN L+ + P + + L +L LLL
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL-PAGLLNGLENLDTLLLQ 180
Query: 152 NNKFEGSIPLELSRFTLLS 170
N +IP F
Sbjct: 181 ENSLY-TIPKGF--FGSHL 196
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 6e-07
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
LD+ L+ +L L L L + N + + L L +L+ L L N+L
Sbjct: 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
+ P ++ P L++L L NN +P L L L
Sbjct: 139 LPPGLLTPTPKLEKLSLANNNLT-ELPAGL--LNGLENLD 175
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
D L L +N L T+L L+L +L+ + V+ LP L L L +N+
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQ 88
Query: 155 FEGSIPLELSRFTLLSELQFDD 176
+ S+PL L+ L
Sbjct: 89 LQ-SLPLLGQTLPALTVLDVSF 109
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 16/61 (26%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L L L N+ + + L L L+ L L N L IP L L
Sbjct: 146 PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHG 204
Query: 153 N 153
N
Sbjct: 205 N 205
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 6e-07
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
KL LR + N + + + + + L++N+L + L SLK L+L +
Sbjct: 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114
Query: 153 NKFEGSIPLELSRFTLLSELQ 173
N+ + + F LS ++
Sbjct: 115 NRIT-CVGNDS--FIGLSSVR 132
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
S + ++L N V K L L+ L L +N+++ + L S++ L L +
Sbjct: 79 GASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYD 138
Query: 153 NKFEGSIPLELSRFTLLSELQ 173
N+ ++ F L L
Sbjct: 139 NQIT-TVAPGA--FDTLHSLS 156
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L L+ L+L+ N + V L+ + LL L +N+++ + P L SL L L
Sbjct: 103 GLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLA 162
Query: 153 N 153
N
Sbjct: 163 N 163
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 3/82 (3%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS-NNKLSGIIPVEISRLPSLKRLLLGN 152
+ L L + H + L + + +S + L + L + + + N
Sbjct: 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 153 NKFEGSIPLELSRFTLLSELQF 174
+ I + L L+F
Sbjct: 90 TRNLTYIDPDA--LKELPLLKF 109
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 94 LSDLRFLVLQKNHFSGVIPKE-LGELTKLELLDLSNNKLSGIIPVE-ISRLPSLKRLLLG 151
LS + + ++ I + L EL L+ L + N L + + L +
Sbjct: 79 LSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEIT 138
Query: 152 NNKFEGSIP 160
+N + SIP
Sbjct: 139 DNPYMTSIP 147
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 8e-07
Identities = 51/309 (16%), Positives = 112/309 (36%), Gaps = 97/309 (31%)
Query: 400 YKGTL--SSGVEIAVAA----TAITSSKDWLK-SQEMAYRKQVDTLSRINHKNFVNLIGY 452
+G L G + VA +S ++ + E A + +H N + L+G
Sbjct: 51 MEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAA------CMKDFSHPNVIRLLGV 104
Query: 453 CEDDEPFNR---MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELN 509
C + M++ + G + +L ++ + ++ ++ + +
Sbjct: 105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK--FMVD------- 155
Query: 510 PPVAHSNLSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----DIEN 553
++ YL++ D AA+ + + V+D I +
Sbjct: 156 -------IALGMEYLSNRNFLHRDLAARNCMLRDDMTV---------CVADFGLSKKIYS 199
Query: 554 S---------VLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPYCEEK--ELS 590
+P LAD ++++++FG+ M EI + G PY + E+
Sbjct: 200 GDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM- 258
Query: 591 IEKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
+ + L +P + C L+ + E++ C +TD RPT + + +QL
Sbjct: 259 YDYLLHGHRLKQPED--C-------------LDELYEIMYSCWRTDPLDRPTFSVLRLQL 303
Query: 650 RQVINISPE 658
+++ P+
Sbjct: 304 EKLLESLPD 312
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 8e-07
Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L + N + L +L+ L ++NN++ I LP L L+L NN
Sbjct: 41 LDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNN 98
Query: 154 KFE--GSIPLELSRFTLLSEL 172
G + L+ L+ L
Sbjct: 99 SLVELGDL-DPLASLKSLTYL 118
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 81 RSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-I 139
R L+G L L+ L++ N + L L L L+NN L + ++ +
Sbjct: 55 RKLDG-----FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPL 109
Query: 140 SRLPSLKRLLLGNN 153
+ L SL L + N
Sbjct: 110 ASLKSLTYLCILRN 123
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 9e-07
Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L++ L K + ++ EL+ ++ + N+ + + + +LK L L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSLAG--MQFFTNLKELHL 70
Query: 151 GNNK 154
+N+
Sbjct: 71 SHNQ 74
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-06
Identities = 16/99 (16%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
++ ++S+ +LS ++ ++ + + T L+ L LS+N++
Sbjct: 20 NAVKQNLGKQSVTDL--VSQKELSGVQNFNGDNSNIQSLAG--MQFFTNLKELHLSHNQI 75
Query: 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
S + P + L L+ L + N+ + + + + L
Sbjct: 76 SDLSP--LKDLTKLEELSVNRNRLKNLNGIPSACLSRLF 112
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-06
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
+ ++L+ L L N S + P L +LTKLE L ++ N+L + + L RL L
Sbjct: 59 MQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGIP---SACLSRLFL 113
Query: 151 GNNKFEGSIPLE-LSRFTLLS 170
NN+ + L L +LS
Sbjct: 114 DNNELRDTDSLIHLKNLEILS 134
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
L L +L L ++ N ++ LG L+KLE+LDL N+++ ++RL + + L
Sbjct: 124 LIHLKNLEILSIRNNKLKSIVM--LGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWIDL 179
Query: 151 GNNKFEGSIPLELSRFTLLSELQFDD 176
K + + ++ D
Sbjct: 180 TGQKCVNEPVKYQPELYITNTVKDPD 205
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 97 LRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFE 156
L L L N L L LE+L + NNKL I+ + L L+ L L N+
Sbjct: 108 LSRLFLDNNELRDTDS--LIHLKNLEILSIRNNKLKSIVM--LGFLSKLEVLDLHGNEIT 163
Query: 157 GSIPLELSRFTLLSELQFDD 176
+ L+R ++ +
Sbjct: 164 -NTG-GLTRLKKVNWIDLTG 181
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 1e-06
Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 79/261 (30%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501
HKN +NL+G C D P ++ EYA G + E+L R + +
Sbjct: 145 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYL---------RARRPPGMEYSYDIN 193
Query: 502 QYMHHELNPPVAHS---NLSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKV 547
+ ++ S L+ YL D AA+ V E + K+
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM---------KI 244
Query: 548 SD-----DI---------ENSVLP-----P--LAD----PETNIYSFGILMLEIIS-GKL 581
+D DI N LP P L D +++++SFG+LM EI + G
Sbjct: 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 304
Query: 582 PYC--EEKELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQ 638
PY +EL + + +++P N C + ++++C Q
Sbjct: 305 PYPGIPVEEL-FKLLKEGHRMDKPAN--C-------------TNELYMMMRDCWHAVPSQ 348
Query: 639 RPTMNDIIVQLRQVINISPEQ 659
RPT ++ L +++ ++ +
Sbjct: 349 RPTFKQLVEDLDRILTLTTNE 369
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 41/190 (21%), Positives = 69/190 (36%), Gaps = 60/190 (31%)
Query: 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT 497
L ++NH + + L G C D P +++ EYA G++ L + G
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGS-----GG 132
Query: 498 AYCLQYMHHELNPPVAHSNLSSHCI-------YLTD------DYAAK---VAE--ICFTT 539
+ + H + +L S YL + D AA+ VAE
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM--- 189
Query: 540 IALPKSKVSD-----DI---------ENSVLP-----P--LAD----PETNIYSFGILML 574
K+SD D+ +P L D +++++SFG+L+
Sbjct: 190 ------KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243
Query: 575 EIIS-GKLPY 583
EI++ G PY
Sbjct: 244 EIVTLGGNPY 253
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 50/300 (16%), Positives = 108/300 (36%), Gaps = 85/300 (28%)
Query: 400 YKGTL--SSGVEIAVAATAITSSKDWLKSQEMA-YRKQVDTLSRINHKNFVNLIGYCEDD 456
Y GTL + G +I A + S E++ + + + +H N ++L+G C
Sbjct: 42 YHGTLLDNDGKKIHCA---VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
E + ++V Y +G + + E + + + A ++Y
Sbjct: 99 EG-SPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY------------- 143
Query: 517 LSS-HCIYLTDDYAAK---VAE--ICFTTIALPKSKVSD-----DIENS----------- 554
L+S ++ D AA+ + E KV+D D+ +
Sbjct: 144 LASKKFVH--RDLAARNCMLDEKFTV---------KVADFGLARDMYDKEYYSVHNKTGA 192
Query: 555 VLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY-L 599
LP L +++++SFG+L+ E+++ G PY ++ L
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQGRRL 251
Query: 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
+P C + + EV+ +C RP+ ++++ ++ + + +
Sbjct: 252 LQPEY--C-------------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 54/247 (21%), Positives = 93/247 (37%), Gaps = 79/247 (31%)
Query: 437 TLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMG 496
++++ H N V L+G +++ +V EY G++ ++L + L + ++ +
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 297
Query: 497 TAYCLQYMHHELNPPVAHSNLSS----HCIYLTDDYAAK---VAE--ICFTTIALPKSKV 547
++Y L H D AA+ V+E + KV
Sbjct: 298 VCEAMEY-------------LEGNNFVHR-----DLAARNVLVSEDNVA---------KV 330
Query: 548 SD-----DI----ENSVLPP--LADPET---NIY-------SFGILMLEIIS-GKLPYC- 584
SD + + LP A PE + SFGIL+ EI S G++PY
Sbjct: 331 SDFGLTKEASSTQDTGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389
Query: 585 -EEKELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTM 642
K++ + + Y ++ P C P A+ +V+K C D RPT
Sbjct: 390 IPLKDV-VPRVEKGYKMDAPDG--C---P----------PAVYDVMKNCWHLDAATRPTF 433
Query: 643 NDIIVQL 649
+ QL
Sbjct: 434 LQLREQL 440
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 57/281 (20%), Positives = 104/281 (37%), Gaps = 79/281 (28%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501
HKN +NL+G C D P ++ EYA G + E+L R + +
Sbjct: 133 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYL---------QARRPPGLEYSYNPS 181
Query: 502 QYMHHELNPPVAHS---NLSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKV 547
+L+ S ++ YL D AA+ V E + K+
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM---------KI 232
Query: 548 SD-----DIENS---------VLP-----P--LAD----PETNIYSFGILMLEIIS-GKL 581
+D DI + LP P L D +++++SFG+L+ EI + G
Sbjct: 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 292
Query: 582 PY--CEEKELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQ 638
PY +EL + + +++P N C + ++++C Q
Sbjct: 293 PYPGVPVEEL-FKLLKEGHRMDKPSN--C-------------TNELYMMMRDCWHAVPSQ 336
Query: 639 RPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELEILSAET 679
RPT ++ L +++ ++ Q + + +I + E
Sbjct: 337 RPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHDYDIPTTEN 377
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 50/306 (16%), Positives = 93/306 (30%), Gaps = 104/306 (33%)
Query: 399 IYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452
I+KG E V + ++ ++ + +S+++HK+ V G
Sbjct: 24 IFKGVRREVGDYGQLHETEVL---LKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGV 80
Query: 453 CEDDEPFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAYCLQYMHHE 507
C + ++V E+ G++ +L I + L+ Q
Sbjct: 81 CVCGDEN--ILVQEFVKFGSLDTYLKKNKNCINILWKLEV------------AKQ----- 121
Query: 508 LNPPVAHSNLSSHCIYLTD------DYAAK---VAEICFTTIALPKS-KVSD-----DIE 552
L++ +L + + AK + P K+SD +
Sbjct: 122 ---------LAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL 172
Query: 553 NSV--------LPP--LADP-----ETNIYSFGILMLEIIS-GKLPY----CEEKELSIE 592
+PP + +P T+ +SFG + EI S G P + K E
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE 232
Query: 593 KWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEV---IKECIKTDLRQRPTMNDIIVQ 648
+ L P+ E+ I C+ + RP+ II
Sbjct: 233 D---RHQLPAPKA--------------------AELANLINNCMDYEPDHRPSFRAIIRD 269
Query: 649 LRQVIN 654
L +
Sbjct: 270 LNSLFT 275
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 100 LVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSI 159
L L N F+ ++PKEL L L+DLSNN++S + S + L L+L N+ I
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR-CI 93
Query: 160 P 160
P
Sbjct: 94 P 94
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 71/257 (27%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501
HKN +NL+G C D P ++ EYA G + E+L R + +
Sbjct: 99 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYL---------RARRPPGMEYSYDIN 147
Query: 502 QYMHHELNPP--------VAH--SNLSS-HCIY---------LTDDYAAKVAEICFTTIA 541
+ ++ +A L+S CI+ +T++ K+A+ F
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD--F---G 202
Query: 542 LPKSKVSDDI----ENSVLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPYC- 584
L + + D N LP P L D +++++SFG+LM EI + G PY
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 585 -EEKELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTM 642
+EL + + +++P N C + ++++C QRPT
Sbjct: 263 IPVEEL-FKLLKEGHRMDKPAN--C-------------TNELYMMMRDCWHAVPSQRPTF 306
Query: 643 NDIIVQLRQVINISPEQ 659
++ L +++ ++ +
Sbjct: 307 KQLVEDLDRILTLTTNE 323
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 25/123 (20%)
Query: 76 LDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGII 135
L +E + L L + L L N+ + L + L +L L N + I
Sbjct: 30 LHGMIPPIEK-MDATLSTLKACKHLALSTNNIEKI--SSLSGMENLRILSLGRNLIKKIE 86
Query: 136 PVE---------------------ISRLPSLKRLLLGNNKFEGSIPLE-LSRFTLLSELQ 173
++ I +L +L+ L + NNK ++ L+ L +L
Sbjct: 87 NLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146
Query: 174 FDD 176
Sbjct: 147 LAG 149
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 22/85 (25%)
Query: 91 LGKLSDLRFLVLQKNHFSGVIP---------------------KELGELTKLELLDLSNN 129
L + +LR L L +N + + +L L +L +SNN
Sbjct: 66 LSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNN 125
Query: 130 KLSGIIPVE-ISRLPSLKRLLLGNN 153
K++ ++ ++ L L+ LLL N
Sbjct: 126 KITNWGEIDKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Query: 93 KLSDLRFLVLQKNHFSGV--IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150
++ + L + + L L + L LS N + I +S + +L+ L L
Sbjct: 21 VATEAEKVELH-GMIPPIEKMDATLSTLKACKHLALSTNNIEKISS--LSGMENLRILSL 77
Query: 151 GNNKFE 156
G N +
Sbjct: 78 GRNLIK 83
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 54/281 (19%), Positives = 108/281 (38%), Gaps = 57/281 (20%)
Query: 400 YKGTLSSGVEIAV--AATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+ GT + +A+ S + +L QE K+ + H+ V L +E
Sbjct: 201 WMGTWNGTTRVAIKTLKPGTMSPEAFL--QEAQVMKK------LRHEKLVQLYAVV-SEE 251
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
P +V EY G++ + L + +L + + A + Y+ +N H +L
Sbjct: 252 PI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDL 306
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----ENSVLP-PLADPETNIY----- 567
+ I + ++ KVA+ + D+ + + P PE +Y
Sbjct: 307 RAANILVGENLVCKVADFGLA------RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 568 -----SFGILMLEIIS-GKLPY--CEEKELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQ 618
SFGIL+ E+ + G++PY +E+ +++ Y + P C P
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREV-LDQVERGYRMPCPPE--C---P------- 407
Query: 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
E++ +++ +C + + +RPT + L + Q
Sbjct: 408 ---ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 55/320 (17%), Positives = 103/320 (32%), Gaps = 73/320 (22%)
Query: 398 TIYKGT---LSSGVEIAVA-----ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNL 449
++ L VA + +D+ + E+ L ++ V
Sbjct: 38 SVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR--EI------QILKALHSDFIVKY 89
Query: 450 IGYCEDDEPFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAY--CLQ 502
G + +V EY P+G + + L + L +++ +I G Y +
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS--QICKGMEYLGSRR 147
Query: 503 YMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-KVSDDI----ENSVLP 557
+H +L A N I + + K+A+ F L K + D E P
Sbjct: 148 CVHRDL----AARN-----ILVESEAHVKIAD--F---GLAKLLPLDKDYYVVREPGQSP 193
Query: 558 P--LADPE---TNIYS-------FGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRN 604
A PE NI+S FG+++ E+ + E +
Sbjct: 194 IFWYA-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252
Query: 605 FSCMIDPSLKSFKQNE-LEA--IC-----EVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
L+ ++ + L A C E++K C + RP+ + + QL + + S
Sbjct: 253 L-------LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305
Query: 657 PEQAVPRLSPLWWAELEILS 676
+ + LS
Sbjct: 306 RGCETHAFTAHPEGKHHSLS 325
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLGNN 153
+ L + LE +++S N + +I ++ S LP L + +
Sbjct: 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89
Query: 154 KFEGSIPLELSRFTLLSELQF 174
I E F L LQ+
Sbjct: 90 NNLLYINPEA--FQNLPNLQY 108
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 94 LSDLRFLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L L + ++K N+ + P+ L L+ L +SN + + V L + +
Sbjct: 78 LPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137
Query: 153 NKFEGSIP 160
N +I
Sbjct: 138 NINIHTIE 145
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
+ L L KN + EL NN L + L + +
Sbjct: 154 FESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR 213
Query: 155 FEGSIPLELSRFTLLSELQ 173
S+P L +L+
Sbjct: 214 IH-SLPSYG--LENLKKLR 229
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 5e-06
Identities = 51/310 (16%), Positives = 108/310 (34%), Gaps = 91/310 (29%)
Query: 400 YKGTL--SSGVEIAVAA---TAITSSKDWLK-SQEMAYRKQVDTLSRINHKNFVNLIGYC 453
Y GTL + G +I A IT + + E K +H N ++L+G C
Sbjct: 106 YHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKD------FSHPNVLSLLGIC 159
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513
E + ++V Y +G + + E + + + A +++
Sbjct: 160 LRSEG-SPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKF---------- 207
Query: 514 HSNLSS-HCIYLTDDYAAK---VAE--ICFTTIALPKSKVSD-----DIENS-------- 554
L+S ++ D AA+ + E KV+D D+ +
Sbjct: 208 ---LASKKFVH--RDLAARNCMLDEKFTV---------KVADFGLARDMYDKEFDSVHNK 253
Query: 555 ---VLP-----P--LAD----PETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAAD 597
LP L +++++SFG+L+ E+++ G PY ++
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQG 312
Query: 598 Y-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
L +P C + + EV+ +C RP+ ++++ ++ + +
Sbjct: 313 RRLLQPEY--C-------------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357
Query: 657 PEQAVPRLSP 666
+ ++
Sbjct: 358 IGEHYVHVNA 367
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 6e-06
Identities = 47/222 (21%), Positives = 86/222 (38%), Gaps = 59/222 (26%)
Query: 395 SGC--TIYKGTL---SSGVEIAVA------ATAITSSKDWLKSQEMAYRKQVDTLSRINH 443
SG T+YKG V+I VA AT+ ++K+ L E VD +
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMASVD------N 76
Query: 444 KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTA 498
+ L+G C ++ + P G + +++ +I L+W +I G
Sbjct: 77 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV--QIAKGMN 131
Query: 499 YCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV--- 555
Y L+ + H +L++ + + K+ + F L K +++ E
Sbjct: 132 Y-LEDRR------LVHRDLAARNVLVKTPQHVKITD--F---GLAKLLGAEEKEYHAEGG 179
Query: 556 -LPP--LADPE---TNIY-------SFGILMLEIIS-GKLPY 583
+P +A E IY S+G+ + E+++ G PY
Sbjct: 180 KVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 29/253 (11%), Positives = 81/253 (32%), Gaps = 49/253 (19%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM----------MVFEYAPNGTVF 474
+ ++V L+++ H V + ++ + + +
Sbjct: 44 ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK 103
Query: 475 EHLHI-KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533
+ ++ ++ + + + I + A ++++H + + H +L I+ T D KV
Sbjct: 104 DWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVG 160
Query: 534 EICFTTIALPKSKVSDDIENSVLPPLA--------------------DPETNIYSFGILM 573
+ T + + + +I+S G+++
Sbjct: 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLIL 220
Query: 574 LEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIK 633
E++ P+ + E L + RN + K + + +++ +
Sbjct: 221 FELLY---PFSTQMER------VRTLTDVRNLKFPPLFTQKYPCEYVM------VQDMLS 265
Query: 634 TDLRQRPTMNDII 646
+RP +II
Sbjct: 266 PSPMERPEAINII 278
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLGNN 153
+D + L LQ N S + K LTKL LL L++NKL +P I L +L+ L + +N
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDN 95
Query: 154 KFEGSIPLELSRFTLLSELQ 173
K + ++P+ + F L L
Sbjct: 96 KLQ-ALPIGV--FDQLVNLA 112
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLG 151
+L+ LR L L N + EL LE L +++NKL +P+ + +L +L L L
Sbjct: 59 RLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLD 117
Query: 152 NNKFEGSIPLELSRFTLLSELQF 174
N+ + S+P + F L++L +
Sbjct: 118 RNQLK-SLPPRV--FDSLTKLTY 137
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L+ L +L L N + +LT L+ L L NN+L + +L LK L L N
Sbjct: 131 SLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDN 190
Query: 153 NKFEGSIPLELSRFTLLSELQF 174
N+ + +P F L +L+
Sbjct: 191 NQLK-RVPEGA--FDSLEKLKM 209
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 21/61 (34%), Positives = 28/61 (45%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
KL+ L+ L L N V +LT+L+ L L NN+L + L LK L L
Sbjct: 155 KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQE 214
Query: 153 N 153
N
Sbjct: 215 N 215
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 54/269 (20%), Positives = 90/269 (33%), Gaps = 92/269 (34%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501
NH N VNL+G C P +++ EY G D L++ R R +
Sbjct: 85 NHMNIVNLLGACTIGGPT--LVITEYCCYG-----------DLLNFLRRKRDSFICSKTS 131
Query: 502 QYMHHELNPPVAHSNLSSHCI-------YLTD------DYAAK---VAE--ICFTTIALP 543
+ + + +L S +L D AA+ + I
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT------- 184
Query: 544 KSKVSD-----DI---------ENSVLPP--LADPET---NIY-------SFGILMLEII 577
K+ D DI N+ LP +A PE+ +Y S+GI + E+
Sbjct: 185 --KICDFGLARDIKNDSNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELF 241
Query: 578 S-GKLPYCEEKELSIEKWAADYLNE------PRNFSCMIDPSLKSFKQNELEAICEVIKE 630
S G PY + ++ + E P + P + +++K
Sbjct: 242 SLGSSPYP---GMPVDSKFYKMIKEGFRMLSPEH--A---P----------AEMYDIMKT 283
Query: 631 CIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
C D +RPT I+ + + I+ S
Sbjct: 284 CWDADPLKRPTFKQIVQLIEKQISESTNH 312
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 7e-06
Identities = 53/276 (19%), Positives = 107/276 (38%), Gaps = 65/276 (23%)
Query: 400 YKGTLSSGVEIAVAATAI----TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455
Y+G + VA + +++L +E A K+ I H N V L+G C
Sbjct: 30 YEGVWK-KYSLTVAVKTLKEDTMEVEEFL--KEAAVMKE------IKHPNLVQLLGVCTR 80
Query: 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
+ PF ++ E+ G + ++L + + + + ++Y+ E + H
Sbjct: 81 EPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL--EKKNFI-HR 135
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----ENSVLP-----P--LADPET 564
+L++ + +++ KVA+ + + ++ D + P P LA
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHAGAKFPIKWTAPESLAY--- 186
Query: 565 NIY-------SFGILMLEIIS-GKLPY--CEEKELSIEKWAADY-LNEPRNFSCMIDPSL 613
N + +FG+L+ EI + G PY + ++ E DY + P C P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEG--C---P-- 238
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
E + E+++ C + + RP+ +I
Sbjct: 239 --------EKVYELMRACWQWNPSDRPSFAEIHQAF 266
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 9e-06
Identities = 43/249 (17%), Positives = 87/249 (34%), Gaps = 54/249 (21%)
Query: 420 SKDWLKSQEMAY--RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
K + M + +V ++ H + + L Y ED +V E NG + +L
Sbjct: 45 DKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVLEMCHNGEMNRYL 102
Query: 478 HIKEMDHLDWNAR--MR-IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAE 534
+ + AR M II G Y H + H +L+ + LT + K+A+
Sbjct: 103 KNRVKPFSENEARHFMHQIITGMLYL-----HSHG--ILHRDLTLSNLLLTRNMNIKIAD 155
Query: 535 ICFTTIALPKSKVSDDIENSV------LPP------LADPETNIYSFGILMLEIISGKLP 582
F K + ++ + P E++++S G + ++ G+ P
Sbjct: 156 --FGLATQLKMP--HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
Query: 583 YCEEKELS-----IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLR 637
+ + + + ADY P S K I + ++ +
Sbjct: 212 F-DTDTVKNTLNKVVL--ADY-EMPSFLS----IEAKDL-----------IHQLLRRNPA 252
Query: 638 QRPTMNDII 646
R +++ ++
Sbjct: 253 DRLSLSSVL 261
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 9e-06
Identities = 54/277 (19%), Positives = 110/277 (39%), Gaps = 49/277 (17%)
Query: 400 YKGTLSSGVEIAV--AATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+ GT + +A+ S + +L QE K+ + H+ V L +E
Sbjct: 284 WMGTWNGTTRVAIKTLKPGTMSPEAFL--QEAQVMKK------LRHEKLVQLYAVV-SEE 334
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
P +V EY G++ + L + +L + + A + Y+ +N H +L
Sbjct: 335 PI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDL 389
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP-PLADPE----------TNI 566
+ I + ++ KVA+ F L + + + P PE +++
Sbjct: 390 RAANILVGENLVCKVAD--FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 567 YSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNELE 622
+SFGIL+ E+ + G++PY +E+ +++ Y + P C P E
Sbjct: 448 WSFGILLTELTTKGRVPYPGMVNREV-LDQVERGYRMPCPPE--C---P----------E 491
Query: 623 AICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
++ +++ +C + + +RPT + L + Q
Sbjct: 492 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 528
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 42/247 (17%), Positives = 81/247 (32%), Gaps = 52/247 (21%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL--HIKEM 482
++M +V+ L + H N V D +V EY G + + KE
Sbjct: 47 AEKQML-VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 483 DHLD----WNARMRIIMGTAYCLQYMH--HELNPPVAHSNLSSHCIYLTDDYAAK----- 531
+LD ++ + L+ H + V H +L ++L K
Sbjct: 106 QYLDEEFVLRVMTQLTLA----LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161
Query: 532 VAEICFTTIALPKSKVSDDIENSVLPPLADPE----------TNIYSFGILMLEIISGKL 581
+A I + K+ V P PE ++I+S G L+ E+ +
Sbjct: 162 LARILNHDTSFAKTFVGT-------PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 582 PYCEEKELSIEK--WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQR 639
P+ + + + P +S + + E+I + R
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYS---------------DELNEIITRMLNLKDYHR 259
Query: 640 PTMNDII 646
P++ +I+
Sbjct: 260 PSVEEIL 266
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 52/271 (19%), Positives = 86/271 (31%), Gaps = 91/271 (33%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501
+H+N VNL+G C P ++FEY G + +L K + +
Sbjct: 107 SHENIVNLLGACTLSGPI--YLIFEYCCYGDLLNYLRSKREKFSEDE------IEYENQK 158
Query: 502 QYMHHELNPPVAHSNLSSHCI-------YLTD------DYAAK---VAE--ICFTTIALP 543
+ E + +L +L D AA+ V +
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVV------- 211
Query: 544 KSKVSD-----DI---------ENSVLP-----P--LADPETNIY-------SFGILMLE 575
K+ D DI N+ LP P L + IY S+GIL+ E
Sbjct: 212 --KICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE---GIYTIKSDVWSYGILLWE 266
Query: 576 IIS-GKLPYCEEKELSIEKWAADYLNE------PRNFSCMIDPSLKSFKQNELEAICEVI 628
I S G PY + ++ + P + E I ++
Sbjct: 267 IFSLGVNPYP---GIPVDANFYKLIQNGFKMDQPFYAT---------------EEIYIIM 308
Query: 629 KECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
+ C D R+RP+ ++ L + + E
Sbjct: 309 QSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 38/267 (14%), Positives = 84/267 (31%), Gaps = 72/267 (26%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM-----------MVFEYAPNGTV 473
+ + +V L+ +NH+ V + F + + EY NGT+
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 474 FEHL-----HIKEMDHLDWNARMR-IIMGTAYCLQYMHHELNPPVAH-----SNLSSHCI 522
++ + + + ++ R I+ +Y H + H N I
Sbjct: 103 YDLIHSENLNQQRDEYWRL---FRQILEALSYI-----HSQG--IIHRDLKPMN-----I 147
Query: 523 YLTDDYAAKV-----AEICFTTIALPKSKVSDDIENSVL------------P------PL 559
++ + K+ A+ ++ + K + +S
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGH 207
Query: 560 ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619
+ + ++YS GI+ E+I E + ++K + + P +F K
Sbjct: 208 YNEKIDMYSLGIIFFEMIYPFSTGMERVNI-LKKLRSVSIEFPPDFDDNKMKVEKKI--- 263
Query: 620 ELEAICEVIKECIKTDLRQRPTMNDII 646
I+ I D +RP ++
Sbjct: 264 --------IRLLIDHDPNKRPGARTLL 282
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 51/312 (16%), Positives = 102/312 (32%), Gaps = 109/312 (34%)
Query: 400 YKGTL--SSGVEIAVA------ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG 451
Y G + I A T + + +L +E + +NH N + LIG
Sbjct: 38 YHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFL--REGLLMRG------LNHPNVLALIG 89
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT--AYCLQYMHHELN 509
E ++ Y +G + + + + + + ++ LQ
Sbjct: 90 IMLPPEGL-PHVLLPYMCHGDLLQFIR---------SPQRNPTVKDLISFGLQ------- 132
Query: 510 PPVAHSNLSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----DIEN 553
++ YL + D AA+ + E KV+D DI +
Sbjct: 133 -------VARGMEYLAEQKFVHRDLAARNCMLDESFTV---------KVADFGLARDILD 176
Query: 554 SVLPPLAD------------PE---TNIY-------SFGILMLEIIS-GKLPY--CEEKE 588
+ E T + SFG+L+ E+++ G PY + +
Sbjct: 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD 236
Query: 589 LSIEKWAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647
L A L +P C +++ +V+++C + D RPT ++
Sbjct: 237 L-THFLAQGRRLPQPEY--C-------------PDSLYQVMQQCWEADPAVRPTFRVLVG 280
Query: 648 QLRQVINISPEQ 659
++ Q+++
Sbjct: 281 EVEQIVSALLGD 292
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 2e-05
Identities = 29/241 (12%), Positives = 60/241 (24%), Gaps = 36/241 (14%)
Query: 435 VDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAP--NGTVFEHLH--IKEMDHLDWNAR 490
D ++ + F L +D N +++ A +F L A
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 491 MRIIMGTAYCLQYMHHELNPPVAH-----SN--LSSHC-IYLTD-----DYAAKVAEICF 537
+ + + + H N + + L D +
Sbjct: 197 HILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSV 253
Query: 538 TTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAAD 597
P+ ++ N + G+ + + LP+ W
Sbjct: 254 PVTYAPREFLNAS------TATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRP 307
Query: 598 YLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI-----IVQLRQV 652
L P D + + +I + D R+R + +QL+
Sbjct: 308 SLRVPG-----TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE 362
Query: 653 I 653
I
Sbjct: 363 I 363
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 48/221 (21%), Positives = 76/221 (34%), Gaps = 68/221 (30%)
Query: 400 YKGTL--SSGVEIAVAATAI---TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCE 454
G L S EI+VA + + K A + + +H N + L G
Sbjct: 62 CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEAS-----IMGQFDHPNIIRLEGVVT 116
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
+P M+V EY NG++ L K + ++ G A ++Y
Sbjct: 117 KSKPV--MIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKY----------- 162
Query: 515 SNLSSHCIYLTDDYAAK---VAE--ICFTTIALPKSKVSD-----DIENSVLPPLAD--- 561
LS Y+ D AA+ + +C KVSD +E+
Sbjct: 163 --LSDMG-YVHRDLAARNILINSNLVC---------KVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 562 --------PETNIY----------SFGILMLEIIS-GKLPY 583
PE Y S+GI++ E++S G+ PY
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 53/283 (18%), Positives = 98/283 (34%), Gaps = 61/283 (21%)
Query: 400 YKGTLSSGVEIAVAATAITSSKDWLKSQEMAYR---KQVDTLSRINHKNFVNLIGYCEDD 456
+ T + ++AV +K M+ + + + + H V L
Sbjct: 205 WMATYNKHTKVAVKT---------MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-K 254
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
EP ++ E+ G++ + L E + A + ++ E + H +
Sbjct: 255 EPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI--EQRNYI-HRD 309
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----ENSVLPP--LADPETNIY--- 567
L + I ++ K+A+ + + D+ E + P A PE +
Sbjct: 310 LRAANILVSASLVCKIADFGLARV------IEDNEYTAREGAKFPIKWTA-PEAINFGSF 362
Query: 568 -------SFGILMLEIIS-GKLPY--CEEKELSIEKWAADY-LNEPRNFSCMIDPSLKSF 616
SFGIL++EI++ G++PY E+ I Y + P N C P
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-IRALERGYRMPRPEN--C---P----- 411
Query: 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
E + ++ C K +RPT I L + Q
Sbjct: 412 -----EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ 449
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 39/196 (19%), Positives = 77/196 (39%), Gaps = 66/196 (33%)
Query: 418 TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
+++ +L E + ++++ H N V L+G +++ +V EY G++ ++L
Sbjct: 56 ATAQAFL--AEAS------VMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYL 106
Query: 478 HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS-HCIYLTDDYAAK---VA 533
+ L + ++ + ++Y L + ++ D AA+ V+
Sbjct: 107 RSRGRSVLGGDCLLKFSLDVCEAMEY-------------LEGNNFVH--RDLAARNVLVS 151
Query: 534 E--ICFTTIALPKSKVSD-----DI----ENSVLP-----P--LADPETNIY-------S 568
E + KVSD + + LP P L + + S
Sbjct: 152 EDNVA---------KVSDFGLTKEASSTQDTGKLPVKWTAPEALRE---KKFSTKSDVWS 199
Query: 569 FGILMLEIIS-GKLPY 583
FGIL+ EI S G++PY
Sbjct: 200 FGILLWEIYSFGRVPY 215
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 45/269 (16%), Positives = 96/269 (35%), Gaps = 61/269 (22%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL--HIKEM 482
K++ K++D L ++NH N + +D N +V E A G + + K+
Sbjct: 74 KARADC-IKEIDLLKQLNHPNVIKYYASFIEDNELN--IVLELADAGDLSRMIKHFKKQK 130
Query: 483 DHLD----WNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538
+ W +++ L++MH V H ++ +++T K+ ++
Sbjct: 131 RLIPERTVWKYFVQLCSA----LEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGL- 182
Query: 539 TIALPKSKV---SDDIENSVL--PPLADPE----------TNIYSFGILMLEIISGKLPY 583
+ +S++ P PE ++I+S G L+ E+ + + P+
Sbjct: 183 ------GRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
Query: 584 CEEKE------LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLR 637
+K IE+ DY P S L+ + CI D
Sbjct: 237 YGDKMNLYSLCKKIEQ--CDY---PPLPSDHYSEELRQL-----------VNMCINPDPE 280
Query: 638 QRPTMNDIIVQLRQVINISPEQAVPRLSP 666
+RP + + + + ++ ++
Sbjct: 281 KRPDVTYVY-DVAKRMHACTASSLEHHHH 308
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 51/232 (21%)
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLD-WNAR 490
R++++ S + H N + + Y D + ++ E+AP G +++ L ++ D +
Sbjct: 62 RREIEIQSHLRHPNILRMYNYFHDRK--RIYLMLEFAPRGELYKEL--QKHGRFDEQRSA 117
Query: 491 M---RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547
+ YC HE V H ++ + + K+A+ + S
Sbjct: 118 TFMEELADALHYC-----HERK--VIHRDIKPENLLMGYKGELKIADFGW-------SVH 163
Query: 548 SDDIENSV-------LPP------LADPETNIYSFGILMLEIISGKLPYCEEKELSI-EK 593
+ + LPP D + +++ G+L E + G P+ +
Sbjct: 164 APSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223
Query: 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645
L P S K I + ++ QR + +
Sbjct: 224 IVNVDLKFPPFLS----DGSKDL-----------ISKLLRYHPPQRLPLKGV 260
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 35/246 (14%), Positives = 85/246 (34%), Gaps = 52/246 (21%)
Query: 427 QEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM--------------MVFEYAPNGT 472
++V L++++H N V+ G + + + E+ GT
Sbjct: 47 NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGT 106
Query: 473 VFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532
+ + + + + LD + + + Y+H + + + +L I+L D K+
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKI 163
Query: 533 AEICFTTIALPKSKVSDDIENSV------LPP--LA----DPETNIYSFGILMLEIISGK 580
+ F L S +D + P ++ E ++Y+ G+++ E++
Sbjct: 164 GD--F---GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC 218
Query: 581 LPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640
E + L + S + D K+ +++ + RP
Sbjct: 219 DTAFETSKF-FTD-----LRDGI-ISDIFDKKEKTL-----------LQKLLSKKPEDRP 260
Query: 641 TMNDII 646
++I+
Sbjct: 261 NTSEIL 266
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 67/255 (26%)
Query: 420 SKDWLKSQEMAY--RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
K L ++ + H++ V G+ ED++ +V E ++ E
Sbjct: 49 PKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCRRRSLLE-- 104
Query: 478 HIKEMDHLD-WNAR--MR-IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533
K L AR +R I++G Y H V H +L ++L +D K+
Sbjct: 105 LHKRRKALTEPEARYYLRQIVLGCQYL-----HRNR--VIHRDLKLGNLFLNEDLEVKIG 157
Query: 534 EICF---TTIALPKSK--------------VSDDIENSVLPPLADPETNIYSFGILMLEI 576
+ F T + + V + E +++S G +M +
Sbjct: 158 D--FGLATKVEYDGERKKVLCGTPNYIAPEV---LSKK----GHSFEVDVWSIGCIMYTL 208
Query: 577 ISGKLPYCEEKELS-----IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631
+ GK P+ E L I+K +Y + P++ + P S I++
Sbjct: 209 LVGKPPF-ETSCLKETYLRIKK--NEY-SIPKHIN----PVAASL-----------IQKM 249
Query: 632 IKTDLRQRPTMNDII 646
++TD RPT+N+++
Sbjct: 250 LQTDPTARPTINELL 264
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 61/300 (20%), Positives = 100/300 (33%), Gaps = 88/300 (29%)
Query: 400 YKGTL--SSGVEIAVAATAI-TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
Y+G G +I VA + T KD + + + + ++H + V LIG E+
Sbjct: 29 YEGVYTNHKGEKINVA---VKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE- 84
Query: 457 EPFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAY--CLQYMHHEL- 508
EP ++ E P G + +L +K + + ++ +I AY + +H ++
Sbjct: 85 EPT--WIIMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLESINCVHRDIA 140
Query: 509 --NPPVAHSNLS-------SHCIYLTDDYAAKVAEI-------------CFTTIALPKSK 546
N VA S I D Y A V + FTT S
Sbjct: 141 VRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTT----ASD 196
Query: 547 VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELS----IEKWAADY-LN 600
V + F + M EI+S GK P+ L I L
Sbjct: 197 V-------------------WMFAVCMWEILSFGKQPF---FWLENKDVIGVLEKGDRLP 234
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQA 660
+P C P + ++ C D RP +++ L V + + A
Sbjct: 235 KPDL--C---P----------PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 279
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 67/255 (26%)
Query: 420 SKDWLKSQEMAY--RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL 477
K L ++ + H++ V G+ ED++ +V E ++ E
Sbjct: 75 PKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLELCRRRSLLE-- 130
Query: 478 HIKEMDHLD-WNAR--MR-IIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533
K L AR +R I++G Y H V H +L ++L +D K+
Sbjct: 131 LHKRRKALTEPEARYYLRQIVLGCQYL-----HRNR--VIHRDLKLGNLFLNEDLEVKIG 183
Query: 534 EICF---TTIALPKSK--------------VSDDIENSVLPPLADPETNIYSFGILMLEI 576
+ F T + + V + E +++S G +M +
Sbjct: 184 D--FGLATKVEYDGERKKVLCGTPNYIAPEV---LSKK----GHSFEVDVWSIGCIMYTL 234
Query: 577 ISGKLPYCEEKELS-----IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631
+ GK P+ E L I+K +Y + P++ + P S I++
Sbjct: 235 LVGKPPF-ETSCLKETYLRIKK--NEY-SIPKHIN----PVAASL-----------IQKM 275
Query: 632 IKTDLRQRPTMNDII 646
++TD RPT+N+++
Sbjct: 276 LQTDPTARPTINELL 290
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 4e-05
Identities = 57/307 (18%), Positives = 99/307 (32%), Gaps = 104/307 (33%)
Query: 400 YKGTL--SSGVEIAVA------ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG 451
++G +AVA T+ + + +L QE +Q D H + V LIG
Sbjct: 407 HQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL--QEALTMRQFD------HPHIVKLIG 458
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP 511
+ P ++ E G + L +++ + + Y Q
Sbjct: 459 VIT-ENPV--WIIMELCTLGELRSFLQVRK-------FSLDLASLILYAYQ--------- 499
Query: 512 VAHSNLSSHCIYLTD------DYAAK---VAE--ICFTTIALPKSKVSD-----DIENSV 555
LS+ YL D AA+ V+ K+ D +E+S
Sbjct: 500 -----LSTALAYLESKRFVHRDIAARNVLVSSNDCV---------KLGDFGLSRYMEDST 545
Query: 556 --------LP-PLADPETNIY----------SFGILMLEIIS-GKLPY--CEEKELSIEK 593
LP PE+ + FG+ M EI+ G P+ + ++ I +
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGR 604
Query: 594 WAADY-LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
L P N C P + ++ +C D +RP ++ QL +
Sbjct: 605 IENGERLPMPPN--C---P----------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
Query: 653 INISPEQ 659
+ Q
Sbjct: 650 LEEEKLQ 656
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 5e-05
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 48/175 (27%)
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL--HIKEMDHLDWNARMRIIMGTAY 499
H+N VNL+G C P +++ EY G + L + ++ A +
Sbjct: 108 QHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA-STR 164
Query: 500 CLQYMHHELNPPVAH--SNLSS-HCIY---------LTDDYAAKVAEICFTTIALPKSKV 547
L + + VA + L+S +CI+ LT+ + AK+ + F L + +
Sbjct: 165 DLLHFSSQ----VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD--F---GLARDIM 215
Query: 548 SDDI----ENSVLP----PLADPET---NIY-------SFGILMLEIIS-GKLPY 583
+D N+ LP PE+ +Y S+GIL+ EI S G PY
Sbjct: 216 NDSNYIVKGNARLPVKWMA---PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 42/221 (19%), Positives = 71/221 (32%), Gaps = 68/221 (30%)
Query: 400 YKGTL--SSGVEIAVAATAI---TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCE 454
G L ++ VA A+ + + A + + +H N + L G
Sbjct: 66 CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS-----IMGQFDHPNIIRLEGVVT 120
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
M+V EY NG++ L + ++ G ++Y
Sbjct: 121 RGRLA--MIVTEYMENGSLDTFLR-THDGQFTIMQLVGMLRGVGAGMRY----------- 166
Query: 515 SNLSSHCIYLTDDYAAK---VAE--ICFTTIALPKSKVSD-----DIENSVLPPLAD--- 561
LS Y+ D AA+ V +C KVSD +E+
Sbjct: 167 --LSDLG-YVHRDLAARNVLVDSNLVC---------KVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 562 --------PETNIY----------SFGILMLEIIS-GKLPY 583
PE + SFG++M E+++ G+ PY
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 7e-05
Identities = 53/288 (18%), Positives = 91/288 (31%), Gaps = 91/288 (31%)
Query: 400 YKGTLSSGVEIAVAA--TAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
G ++AV S ++ QE T+ +++H V G C +
Sbjct: 25 KLGKWKGQYDVAVKMIKEGSMSEDEFF--QEAQ------TMMKLSHPKLVKFYGVCSKEY 76
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
P +V EY NG + +L L+ + + + + ++
Sbjct: 77 PI--YIVTEYISNGCLLNYLR-SHGKGLEPSQLLEMCYDVCEGMAFLE------------ 121
Query: 518 SSHCIYLTDDYAAK---VAE--ICFTTIALPKSKVSD-----DIENSV--------LP-- 557
S I+ D AA+ V KVSD + + P
Sbjct: 122 SHQFIH--RDLAARNCLVDRDLCV---------KVSDFGMTRYVLDDQYVSSVGTKFPVK 170
Query: 558 --PLADPETNIY----------SFGILMLEIIS-GKLPY--CEEKELSIEKWAADY-LNE 601
PE Y +FGILM E+ S GK+PY E+ + K + + L
Sbjct: 171 WSA---PEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-VLKVSQGHRLYR 226
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
P + I +++ C +RPT ++ +
Sbjct: 227 PHL--A---S----------DTIYQIMYSCWHELPEKRPTFQQLLSSI 259
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 50/222 (22%), Positives = 81/222 (36%), Gaps = 69/222 (31%)
Query: 400 YKGTL---SSGVEIAVAATAI---TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC 453
YKG L S E+ VA + + K + A + + +H N + L G
Sbjct: 61 YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG-----IMGQFSHHNIIRLEGVI 115
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513
+P M++ EY NG + + L K+ + ++ G A ++Y
Sbjct: 116 SKYKPM--MIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKY---------- 162
Query: 514 HSNLSSHCIYLTDDYAAK---VAE--ICFTTIALPKSKVSD--------DIENSVLP--- 557
L++ Y+ D AA+ V +C KVSD D +
Sbjct: 163 ---LANMN-YVHRDLAARNILVNSNLVC---------KVSDFGLSRVLEDDPEATYTTSG 209
Query: 558 ---PL--ADPETNIY----------SFGILMLEIIS-GKLPY 583
P+ PE Y SFGI+M E+++ G+ PY
Sbjct: 210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 7e-05
Identities = 43/272 (15%), Positives = 84/272 (30%), Gaps = 53/272 (19%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDD 456
TI + ++AV K L ++V L + H N + +D
Sbjct: 39 TIVYRGMFDNRDVAV--------KRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDR 90
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR--MR-IIMGTAYCLQYMHHELNPPVA 513
+ + + E T+ E++ K+ HL ++ G A+ H LN +
Sbjct: 91 Q--FQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL-----HSLN--IV 140
Query: 514 HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA------------- 560
H +L H I ++ A + + L K S +
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE 200
Query: 561 ------DPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613
+I+S G + +IS G P+ + + + + D
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA 260
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645
+ I++ I D ++RP+ +
Sbjct: 261 REL-----------IEKMIAMDPQKRPSAKHV 281
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 7e-05
Identities = 31/232 (13%), Positives = 65/232 (28%), Gaps = 43/232 (18%)
Query: 435 VDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA--PNGTVFEHL--HIKEMDHLDWNAR 490
D + K + + D +R ++ T E L H L +AR
Sbjct: 154 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHAR 213
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD 550
+++ + L +HH + H+ L I L + F + +
Sbjct: 214 LQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTG--FEHLVRDGASAVSP 268
Query: 551 IENSVLPP----------------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKW 594
I PP L + ++ G+ + I LP ++ L +W
Sbjct: 269 IGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW 328
Query: 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
+N + + +++ ++ R +
Sbjct: 329 I---FRSCKNIP---------------QPVRALLEGFLRYPKEDRLLPLQAM 362
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 9e-05
Identities = 44/222 (19%), Positives = 80/222 (36%), Gaps = 59/222 (26%)
Query: 395 SGC--TIYKGTL---SSGVEIAVA------ATAITSSKDWLKSQEMAYRKQVDTLSRINH 443
SG T++KG ++I V + S + M +D H
Sbjct: 23 SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVT--DHMLAIGSLD------H 74
Query: 444 KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTA 498
+ V L+G C +V +Y P G++ +H+ + L+W +I G
Sbjct: 75 AHIVRLLGLCPGSSL---QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV--QIAKGMY 129
Query: 499 YCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV--- 555
Y L+ + H NL++ + L +VA+ F + DD +
Sbjct: 130 Y-LEEHG------MVHRNLAARNVLLKSPSQVQVAD--F---GVADLLPPDDKQLLYSEA 177
Query: 556 -LPP--LADPETNIY----------SFGILMLEIIS-GKLPY 583
P +A E+ + S+G+ + E+++ G PY
Sbjct: 178 KTPIKWMA-LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-04
Identities = 59/300 (19%), Positives = 104/300 (34%), Gaps = 70/300 (23%)
Query: 400 YKGTL---SSGVEIAVA------ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
+ G VA W + E+ D L + H++ +
Sbjct: 48 SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQ--EI------DILRTLYHEHIIKYK 99
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHL---HIKEMDHLDWNARMRIIMGTAY--CLQYMH 505
G CED + +V EY P G++ ++L I L + +I G AY Y+H
Sbjct: 100 GCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ--QICEGMAYLHAQHYIH 157
Query: 506 HELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-----ENSVLPP-- 558
+L A N + L +D K+ + F L K+ E+ P
Sbjct: 158 RDL----AARN-----VLLDNDRLVKIGD--F---GLAKAVPEGHEYYRVREDGDSPVFW 203
Query: 559 LADPET---NIYS-------FGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCM 608
A PE + FG+ + E+++ +C+ + K+ +
Sbjct: 204 YA-PECLKEYKFYYASDVWSFGVTLYELLT----HCDSSQSPPTKFLELIGIAQGQMT-- 256
Query: 609 IDPSLKSFKQNE-LEA--IC-----EVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQA 660
+ + ++ E L C ++K C +T+ RPT ++I L+ V QA
Sbjct: 257 VLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA 316
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L++L L L N + + LT+L+ L L N+L + RL LK L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 153 NKFEGSIPLELSRFTLLSELQ 173
N+ + SIP F L+ LQ
Sbjct: 141 NQLQ-SIPAGA--FDKLTNLQ 158
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
+ LD++ L L+ L +L L N + +LT+L L L+NN+L+
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS 97
Query: 134 IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQ 173
+ L L +L LG N+ + S+P + F L++L+
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLK-SLPSGV--FDRLTKLK 134
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 55/288 (19%), Positives = 107/288 (37%), Gaps = 56/288 (19%)
Query: 400 YKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
+ A+ + + + ++++ L + H N V G C
Sbjct: 27 EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86
Query: 460 NRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAY--CLQYMHHELNPPV 512
N ++ EY P G++ ++L I + L + + +I G Y +Y+H +L
Sbjct: 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKGMEYLGTKRYIHRDL---- 140
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-----ENSVLPP--LADPE-- 563
A N I + ++ K+ + F L K D E P A PE
Sbjct: 141 ATRN-----ILVENENRVKIGD--F---GLTKVLPQDKEFFKVKEPGESPIFWYA-PESL 189
Query: 564 -TNIYS-------FGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL-K 614
+ +S FG+++ E+ + Y E+ + ++ N+ MI L +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMIGNDK--QGQMIVFHLIE 243
Query: 615 SFKQNE-LEA--IC-----EVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
K N L C ++ EC ++ QRP+ D+ +++ Q+ +
Sbjct: 244 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 12/72 (16%), Positives = 24/72 (33%)
Query: 400 YKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459
+ A+ + + + ++++ L + H N V G C
Sbjct: 58 EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117
Query: 460 NRMMVFEYAPNG 471
N ++ EY P G
Sbjct: 118 NLKLIMEYLPYG 129
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 100 LVLQKNHFSGVIPKEL-GELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGS 158
L+L N + L G L L L+L N+L+GI P ++ L LG NK +
Sbjct: 34 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-E 92
Query: 159 IPLELSRFTLLSELQ 173
I ++ F L +L+
Sbjct: 93 ISNKM--FLGLHQLK 105
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
S ++ L L +N + K L +L+ L+L +N++S ++P L SL L L +
Sbjct: 76 GASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLAS 135
Query: 153 N 153
N
Sbjct: 136 N 136
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
+L L L L++N +G+ P + ++ L L NK+ I L LK L L +
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 153 NKFEGSIP 160
N+ +
Sbjct: 112 NQIS-CVM 118
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 49/296 (16%), Positives = 101/296 (34%), Gaps = 74/296 (25%)
Query: 400 YKGTL---SSGVEIAVA------ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLI 450
VA + D K E+ + L + H+N V
Sbjct: 38 ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK--EI------EILRNLYHENIVKYK 89
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAY--CLQY 503
G C +D ++ E+ P+G++ E+L I L + +I G Y QY
Sbjct: 90 GICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV--QICKGMDYLGSRQY 147
Query: 504 MHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-----ENSVLPP 558
+H +L A N + + ++ K+ + F L K+ +D ++ P
Sbjct: 148 VHRDL----AARN-----VLVESEHQVKIGD--F---GLTKAIETDKEYYTVKDDRDSPV 193
Query: 559 --LADPETNIY----------SFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606
A PE + SFG+ + E+++ YC+ + +
Sbjct: 194 FWYA-PECLMQSKFYIASDVWSFGVTLHELLT----YCDSDSSPMALFLKMIGPTHGQ-- 246
Query: 607 CMIDPSL-KSFKQNEL--------EAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
M L + K+ + + + +++++C + R + ++I ++
Sbjct: 247 -MTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNG 471
+S+ NH+N V IG P ++ E G
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPR--FILLELMAGG 159
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNG 471
+S+ NH+N V IG P ++ E G
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPR--FILMELMAGG 118
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 54/283 (19%), Positives = 104/283 (36%), Gaps = 73/283 (25%)
Query: 400 YKGTLSSGVEIAVAA--TAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+ G + ++A+ S +D++ +E + +++H V L G C +
Sbjct: 25 HLGYWLNKDKVAIKTIREGAMSEEDFI--EEAE------VMMKLSHPKLVQLYGVCLEQA 76
Query: 458 PFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
P +V E+ +G + ++L L + G AY L+ V
Sbjct: 77 PI--CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL--DVCEGMAY-LEEAC------V 125
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI----ENSVLP----PLADPET 564
H +L++ + ++ KV++ T V DD + P PE
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRF------VLDDQYTSSTGTKFPVKWAS---PEV 176
Query: 565 ---NIYS-------FGILMLEIIS-GKLPY--CEEKELSIEKWAADY-LNEPRNFSCMID 610
+ YS FG+LM E+ S GK+PY E+ +E + + L +PR
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-VEDISTGFRLYKPRL--A--- 230
Query: 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
+ +++ C + RP + ++ QL ++
Sbjct: 231 S----------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
L+ L L L N + + L L+ L + NKL+ +P I RL L L L
Sbjct: 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQ 144
Query: 153 NKFEGSIP 160
N+ + SIP
Sbjct: 145 NQLK-SIP 151
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 50/280 (17%), Positives = 98/280 (35%), Gaps = 90/280 (32%)
Query: 427 QEMAYRKQVDTLSRINHKNFVNLIGYC-EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHL 485
E+ + +H N VNL+G C + P M++ E+ G + +L K + +
Sbjct: 79 SELKILIHIG-----HHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 486 DWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD------DYAAK---VAE-- 534
+ + L+++ + ++ +L D AA+ ++E
Sbjct: 132 PYKVAPEDLYKDFLTLEHLIC-----YSF-QVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 535 ICFTTIALPKSKVSD-----DI---------ENSVLP-----P--LADPETNIY------ 567
+ K+ D DI ++ LP P + D +Y
Sbjct: 186 VV---------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD---RVYTIQSDV 233
Query: 568 -SFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNE------PRNFSCMIDPSLKSFKQN 619
SFG+L+ EI S G PY + I++ L E P
Sbjct: 234 WSFGVLLWEIFSLGASPYP---GVKIDEEFCRRLKEGTRMRAPDY--T------------ 276
Query: 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
+ + + +C + QRPT ++++ L ++ + +Q
Sbjct: 277 -TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 53/291 (18%), Positives = 103/291 (35%), Gaps = 69/291 (23%)
Query: 400 YKGTL-SSGVEIAVAATAI-TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+G +I VA I + K+ ++ + ++++ V LIG C+ E
Sbjct: 27 RQGVYRMRKKQIDVA---IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E 82
Query: 458 PFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
M+V E A G + + L I + + ++ MG Y L+ +
Sbjct: 83 AL--MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH--QVSMGMKY-LEEKN------F 131
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP----PL---ADPETN 565
H +L++ + L + + AK+++ F L K+ +DD + PL A PE
Sbjct: 132 VHRDLAARNVLLVNRHYAKISD--F---GLSKALGADDSYYTARSAGKWPLKWYA-PECI 185
Query: 566 IY----------SFGILMLEIIS-GKLPYCEEKELS----IEKWAADY-LNEPRNFSCMI 609
+ S+G+ M E +S G+ PY K++ + + P C
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALSYGQKPY---KKMKGPEVMAFIEQGKRMECPPE--CP- 239
Query: 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQA 660
+ ++ +C RP + ++R +
Sbjct: 240 ------------PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 51/302 (16%), Positives = 99/302 (32%), Gaps = 94/302 (31%)
Query: 400 YKGTL--SSGVEIAVA------ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG 451
++G +AVA T+ + + +L QE +Q D H + V LIG
Sbjct: 32 HQGIYMSPENPALAVAIKTCKNCTSDSVREKFL--QEALTMRQFD------HPHIVKLIG 83
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAY--CLQYM 504
+ P ++ E G + L + + + ++ AY +++
Sbjct: 84 VIT-ENPV--WIIMELCTLGELRSFLQVRKYSLDLASLILYAY--QLSTALAYLESKRFV 138
Query: 505 HHEL---NPPVAHSNLS-------SHCIYLTDDYAAKVAEI-------------CFTTIA 541
H ++ N V+ ++ S + + Y A ++ FT+
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS-- 196
Query: 542 LPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPY--CEEKELSIEKWAADY 598
S V + FG+ M EI+ G P+ + ++ I +
Sbjct: 197 --ASDV-------------------WMFGVCMWEILMHGVKPFQGVKNNDV-IGRIENGE 234
Query: 599 -LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
L P N C P + ++ +C D +RP ++ QL ++
Sbjct: 235 RLPMPPN--C---P----------PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279
Query: 658 EQ 659
Q
Sbjct: 280 AQ 281
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 47/222 (21%), Positives = 86/222 (38%), Gaps = 59/222 (26%)
Query: 395 SGC--TIYKGTL---SSGVEIAVA------ATAITSSKDWLKSQEMAYRKQVDTLSRINH 443
SG T+YKG V+I VA AT+ ++K+ L E VD +
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMASVD------N 76
Query: 444 KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTA 498
+ L+G C ++ + P G + +++ +I L+W +I G
Sbjct: 77 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV--QIAKGMN 131
Query: 499 YCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV--- 555
Y L+ + H +L++ + + K+ + F L K +++ E
Sbjct: 132 Y-LEDRR------LVHRDLAARNVLVKTPQHVKITD--F---GLAKLLGAEEKEYHAEGG 179
Query: 556 -LPP--LADPE---TNIY-------SFGILMLEIIS-GKLPY 583
+P +A E IY S+G+ + E+++ G PY
Sbjct: 180 KVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGN 152
+L++L +L+L N + +LT L+ L L N+L + +L +L L L +
Sbjct: 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAH 142
Query: 153 NKFEGSIP 160
N+ + S+P
Sbjct: 143 NQLQ-SLP 149
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 53/216 (24%), Positives = 84/216 (38%), Gaps = 60/216 (27%)
Query: 400 YKGTL-SSGVEIAVA-------ATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG 451
KG V VA A + L E +Q+D + V +IG
Sbjct: 34 KKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLD------NPYIVRMIG 85
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHL----HIKEMDHLDWNARMRIIMGTAY--CLQYMH 505
CE E + M+V E A G + ++L H+K+ + ++ ++ MG Y ++H
Sbjct: 86 ICEA-ESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVH--QVSMGMKYLEESNFVH 140
Query: 506 HELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE-----NSVLPP-- 558
+L A N + L + AK+++ F L K+ +D+ + P
Sbjct: 141 RDL----AARN-----VLLVTQHYAKISD--F---GLSKALRADENYYKAQTHGKWPVKW 186
Query: 559 LADPETNIY----------SFGILMLEIIS-GKLPY 583
A PE Y SFG+LM E S G+ PY
Sbjct: 187 YA-PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 4e-04
Identities = 52/293 (17%), Positives = 93/293 (31%), Gaps = 91/293 (31%)
Query: 400 YKGTLSSGVEIAVAA--TAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
G ++A+ S +++ +E + ++H+ V L G C
Sbjct: 41 KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAK------VMMNLSHEKLVQLYGVCTKQR 92
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
P ++ EY NG + +L + + + ++Y+
Sbjct: 93 PI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE------------ 137
Query: 518 SSHCIYLTDDYAAK---VAE--ICFTTIALPKSKVSD-----DIENSV--------LP-- 557
S ++ D AA+ V + + KVSD + + P
Sbjct: 138 SKQFLH--RDLAARNCLVNDQGVV---------KVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 558 --PLADPET---NIYS-------FGILMLEIIS-GKLPY--CEEKELSIEKWAADY-LNE 601
P PE + +S FG+LM EI S GK+PY E E A L
Sbjct: 187 WSP---PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-AEHIAQGLRLYR 242
Query: 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
P E + ++ C +RPT ++ + V++
Sbjct: 243 PHL--A---S----------EKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 51/268 (19%), Positives = 102/268 (38%), Gaps = 57/268 (21%)
Query: 395 SGCTIYKGT-LSSGVEIAVAATAITSSKDW-LKSQEMAYRKQVDTLSRINHKNFVNLIG- 451
+ T+Y +++G E+A+ + L E + + + N VN +
Sbjct: 32 ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE------ILVMRENKNPNIVNYLDS 85
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP 511
Y DE + +V EY G++ + + MD A + L+++H
Sbjct: 86 YLVGDELW---VVMEYLAGGSLTDVVTETCMDE-GQIAA--VCRECLQALEFLHSN---Q 136
Query: 512 VAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE--NSVL-------PPLA-- 560
V H ++ S I L D + K+ + F ++++ + ++++ P +
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFC------AQITPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 561 ---DPETNIYSFGILMLEIISGKLPYCEEKELS----IEKWAADYLNEPRNFSCMIDPSL 613
P+ +I+S GI+ +E+I G+ PY E L I L P S
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS----AIF 246
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPT 641
+ F + C++ D+ +R +
Sbjct: 247 RDF-----------LNRCLEMDVEKRGS 263
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 5e-04
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 44/208 (21%)
Query: 400 YKGTL-SSGVEIAVAATAI-TSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+G +I VA I + K+ ++ + ++++ V LIG C+ E
Sbjct: 353 RQGVYRMRKKQIDVA---IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E 408
Query: 458 PFNRMMVFEYAPNGTVFEHL-----HIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
M+V E A G + + L I + + ++ MG Y L+ +
Sbjct: 409 AL--MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH--QVSMGMKY-LEEKN------F 457
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE-----NSVLP-PLADPETNI 566
H NL++ + L + + AK+++ F L K+ +DD P PE
Sbjct: 458 VHRNLAARNVLLVNRHYAKISD--F---GLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 567 Y----------SFGILMLEIIS-GKLPY 583
+ S+G+ M E +S G+ PY
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPY 540
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 44/251 (17%), Positives = 89/251 (35%), Gaps = 42/251 (16%)
Query: 412 VAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNG 471
A I+ + K+ + + ++V L +++H N + L + ED F +V E G
Sbjct: 54 CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY--LVGEVYTGG 111
Query: 472 TVFEHLHIKEMDHLD-WNAR--MRIIMGT-AYCLQYMHHELNPPVAHSNLS-SHCIYLTD 526
+F+ I +A +R ++ Y H+ + H +L + + +
Sbjct: 112 ELFD--EIISRKRFSEVDAARIIRQVLSGITYM-----HKNK--IVHRDLKPENLLLESK 162
Query: 527 DYAAKVAEICF-TTIALPKSKVSDDIENS-------VLPPLADPETNIYSFGILMLEIIS 578
A + I F + SK D + VL D + +++S G+++ ++S
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLS 222
Query: 579 GKLPYCEEKE----LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKT 634
G P+ E +EK + + S K I++ +
Sbjct: 223 GCPPFNGANEYDILKKVEKGKYTFELPQWKK---VSESAKDL-----------IRKMLTY 268
Query: 635 DLRQRPTMNDI 645
R + D
Sbjct: 269 VPSMRISARDA 279
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 23/148 (15%), Positives = 45/148 (30%), Gaps = 30/148 (20%)
Query: 437 TLSRINHKNFVNLIGYCEDDE-PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIM 495
LSRI+ ++ +V E+ G++ E +R +
Sbjct: 84 RLSRIDKPGVARVLDVVHTRAGGL---VVAEWIRGGSLQEVAD----TSPSPVGAIRAMQ 136
Query: 496 GTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV 555
A H VA S + ++ D +A P +
Sbjct: 137 SLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLA--------YP----------AT 175
Query: 556 LPPLADPETNIYSFGILMLEIISGKLPY 583
+P A+P+ +I G + ++ + P
Sbjct: 176 MPD-ANPQDDIRGIGASLYALLVNRWPL 202
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 36/244 (14%), Positives = 90/244 (36%), Gaps = 43/244 (17%)
Query: 420 SKDWLKSQEMAY-RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLH 478
K + + + ++V L ++H N + L + ED + +V E G +F+
Sbjct: 71 RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY--LVMECYKGGELFD--E 126
Query: 479 IKEMDHLD-WNAR--MRIIMGT-AYCLQYMHHELNPPVAHSNLS-SHCIYLTDDYAAKVA 533
I + +A ++ ++ Y H+ N + H +L + + + + A +
Sbjct: 127 IIHRMKFNEVDAAVIIKQVLSGVTYL-----HKHN--IVHRDLKPENLLLESKEKDALIK 179
Query: 534 EICF-TTIALPKSKVSDDIENS-------VLPPLADPETNIYSFGILMLEIISGKLPYCE 585
+ F + K + + VL D + +++S G+++ +++G P+
Sbjct: 180 IVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGG 239
Query: 586 EKE----LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPT 641
+ + +EK + + + K IK+ ++ D ++R +
Sbjct: 240 QTDQEILRKVEKGKYTFDSPEWKN---VSEGAKDL-----------IKQMLQFDSQRRIS 285
Query: 642 MNDI 645
Sbjct: 286 AQQA 289
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 93 KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLG 151
KL+ L +L L N + +LT+L+ L L+ N+L +P + +L LK L L
Sbjct: 74 KLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLY 132
Query: 152 NNKFEGSIP 160
N+ + S+P
Sbjct: 133 QNQLK-SVP 140
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 48/265 (18%), Positives = 97/265 (36%), Gaps = 57/265 (21%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDW-LKSQEMAYRKQVDTLSRINHKNFVNLIG-YCE 454
+ SG ++AV + + L E V + H N V + Y
Sbjct: 60 IVCLAREKHSGRQVAVKMMDLRKQQRRELLFNE------VVIMRDYQHFNVVEMYKSYLV 113
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
+E + ++ E+ G + + + ++ + A + L Y+H + V H
Sbjct: 114 GEELW---VLMEFLQGGALTDIVSQVRLNE-EQIAT--VCEAVLQALAYLHAQ---GVIH 164
Query: 515 SNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIE--NSVL-------PPLA----- 560
++ S I LT D K+++ F ++S D+ S++ P +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCA------QISKDVPKRKSLVGTPYWMAPEVISRSLY 218
Query: 561 DPETNIYSFGILMLEIISGKLPYCEEKELS----IEKWAADYLNEPRNFSCMIDPSLKSF 616
E +I+S GI+++E++ G+ PY + + + L S P L+ F
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVS----PVLRDF 274
Query: 617 KQNELEAICEVIKECIKTDLRQRPT 641
++ + D ++R T
Sbjct: 275 -----------LERMLVRDPQERAT 288
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 8e-04
Identities = 16/136 (11%), Positives = 41/136 (30%), Gaps = 4/136 (2%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+ + A+ + + +V + +++H N L ED+
Sbjct: 41 VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+ +V E G + + L++ D A + C + +N +
Sbjct: 101 QYIC--LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFR 158
Query: 517 LSSHCIYLTDDYAAKV 532
S + + + +
Sbjct: 159 ESLDFVQ-REKLISNI 173
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 680 | |||
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.98 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.97 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.97 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.96 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.93 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.91 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.91 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.88 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.88 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.87 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.87 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.82 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.76 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.75 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.74 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.73 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.72 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.71 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.71 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.7 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.7 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.66 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.65 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.65 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.64 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.63 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.63 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.63 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.63 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.62 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.62 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.62 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.61 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.61 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.61 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.61 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.6 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.6 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.59 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.59 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.59 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.59 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.59 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.59 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.59 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.58 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.58 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.57 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.57 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.57 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.57 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.57 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.56 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.56 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.56 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.55 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.55 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.55 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.55 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.54 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.54 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.54 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.54 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.53 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.53 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.53 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.52 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.52 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.52 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.52 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.51 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.5 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.5 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.49 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.49 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.48 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.48 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.48 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.47 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.47 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.47 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.47 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.46 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.45 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.45 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.45 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.45 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.45 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.45 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.45 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.45 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.45 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.44 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.43 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.43 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.43 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.43 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.4 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.4 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.39 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.39 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.39 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.37 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.37 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.37 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.35 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.35 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.35 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.35 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.34 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.33 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.32 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.32 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.32 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.31 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.3 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.3 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.28 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.28 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.27 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.26 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.26 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.25 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.24 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.24 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.24 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.24 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.23 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.23 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.22 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.22 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.21 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.2 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.19 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.16 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.13 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.1 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.1 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.1 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.09 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.08 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.07 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.05 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.03 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 98.99 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.94 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.79 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 98.75 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.66 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.6 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.57 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.55 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.39 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.37 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.36 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.3 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.27 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.26 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.2 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.18 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 98.13 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.13 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.01 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.0 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.86 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 97.86 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.8 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.68 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.63 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.62 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.6 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 97.57 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.51 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 97.14 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.06 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 96.97 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.86 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 96.81 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 96.77 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 96.73 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.73 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.56 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 96.45 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.37 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.23 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.17 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.07 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 95.9 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.73 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 95.72 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 94.91 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 94.8 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 94.77 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 94.29 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 93.94 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 93.47 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 93.31 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 93.28 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 91.33 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 91.08 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 90.93 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 90.67 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 89.38 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 85.26 |
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-52 Score=432.85 Aligned_cols=255 Identities=18% Similarity=0.328 Sum_probs=201.9
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeE
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~ 452 (680)
|+..++..|.+.||+|+||+||+|++. +++.||||+++.... ....++|.+|++++++++|||||+++|+
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~----~~~~~~f~~E~~il~~l~HpNIV~l~g~ 97 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE----GPLREEFRHEAMLRARLQHPNVVCLLGV 97 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC----C-CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC----hHHHHHHHHHHHHHHhCCCCCCCCcceE
Confidence 334445567789999999999999973 567899999864432 2235679999999999999999999999
Q ss_pred EecCCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005734 453 CEDDEPFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLS 518 (680)
Q Consensus 453 ~~~~~~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlK 518 (680)
|.+++ ..+||||||++|+|.++|+.+. ...++|.++++|+.|||+||+|||+. +|||||||
T Consensus 98 ~~~~~--~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK 172 (308)
T 4gt4_A 98 VTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLA 172 (308)
T ss_dssp ECSSS--SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEECC--EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCcc
Confidence 99877 5699999999999999996432 24699999999999999999999998 99999999
Q ss_pred CCCeeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccc
Q 005734 519 SHCIYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEK 587 (680)
Q Consensus 519 p~NILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~ 587 (680)
|+|||||+++++||+|||+++........ ....||....+.++.++|||||||++|||+| |+.||.+..
T Consensus 173 ~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp GGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred ccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876422111 1122333334578999999999999999999 899998765
Q ss_pred cccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 588 ELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..++...+... ... ..+.+++.++.+|+.+||+.||++||||+||+++|+.+.++
T Consensus 253 ~~~~~~~i~~~----~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~nl 307 (308)
T 4gt4_A 253 NQDVVEMIRNR----QVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGNL 307 (308)
T ss_dssp HHHHHHHHHTT----CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC-
T ss_pred HHHHHHHHHcC----CCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccCC
Confidence 54444444321 111 12234457899999999999999999999999999976543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-51 Score=426.80 Aligned_cols=248 Identities=16% Similarity=0.291 Sum_probs=196.8
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||+++|+|.+++ .
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~ 117 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----ESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--P 117 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--S
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--E
Confidence 3488999999999999874 47889999986433 344678999999999999999999999999877 6
Q ss_pred eEEEEEecCCCChhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIKE-------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD 527 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~-------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 527 (680)
.+||||||++|+|.++++... ...++|.++++|+.|||+||+|||+. +||||||||+|||||++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 799999999999999997532 24699999999999999999999998 99999999999999999
Q ss_pred CCeEEcccccccccCCCCC----------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHH
Q 005734 528 YAAKVAEICFTTIALPKSK----------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAA 596 (680)
Q Consensus 528 ~~~ki~DFGla~~~~~~~~----------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~ 596 (680)
+.+||+|||+++....... .....||......+++++|||||||++|||+| |+.||.+....++...+.
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~ 274 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999987643211 11223444455678999999999999999999 999998765444444433
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
...+. ..+..++.++.+|+.+||+.||++||||+||+++|+.+...+|
T Consensus 275 ~g~~~-------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 275 QGREL-------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp HTCCC-------------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred cCCCC-------------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 22111 1122344688999999999999999999999999999987654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-51 Score=424.56 Aligned_cols=249 Identities=15% Similarity=0.277 Sum_probs=200.3
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
+.+.||+|+||+||+|++. ++..||||+++... ....++|.+|+++|++++|||||+++|+|.+++ .
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~ 89 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--P 89 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--S
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-----hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--E
Confidence 4589999999999999874 47889999986433 334678999999999999999999999999877 6
Q ss_pred eEEEEEecCCCChhhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIK-----------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA 529 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~-----------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 529 (680)
.+||||||++|+|.++|+.. ....++|.++++|+.|||+||+|||+. +||||||||+|||+|+++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 79999999999999999743 235799999999999999999999998 9999999999999999999
Q ss_pred eEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHH
Q 005734 530 AKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADY 598 (680)
Q Consensus 530 ~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~ 598 (680)
+||+|||+|+........ ....||......+++++|||||||++|||+| |+.||.+....++...+...
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~ 246 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 246 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999999876432111 1122333334578999999999999999999 99999876544444443321
Q ss_pred hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
... ..+..++.++.+|+.+||+.||++||||+||++.|+++...+|.
T Consensus 247 ~~~-------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~ 293 (299)
T 4asz_A 247 RVL-------------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293 (299)
T ss_dssp CCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCC
T ss_pred CCC-------------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCc
Confidence 111 11223446899999999999999999999999999999876654
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=417.14 Aligned_cols=251 Identities=22% Similarity=0.411 Sum_probs=195.0
Q ss_pred hhccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.+.||+|+||+||+|++++ .||||+++.... .....++|.+|++++++++|||||+++|+|.++ ..+|||
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVm 110 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVT 110 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEE
Confidence 456899999999999999864 599999865432 234567899999999999999999999999754 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|||++|+|.++|+... ..++|.++++|+.|||+||+|||+. +||||||||+|||||+++.+||+|||+|+......
T Consensus 111 Ey~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp ECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred EcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999997543 4699999999999999999999998 99999999999999999999999999998764221
Q ss_pred Cc-----ccccccCCCC--------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 546 KV-----SDDIENSVLP--------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 546 ~~-----~~~~~~~~~~--------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.. ....+.|.+| ..++.++|||||||++|||+||+.||.+.......... +... ...|.
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~---~~~~-----~~~p~ 258 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM---VGRG-----YASPD 258 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHTT-----CCCCC
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH---HhcC-----CCCCC
Confidence 11 1112233332 34788999999999999999999999865432222211 1111 11222
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+...+.+++.++.+|+.+||+.||++||||.||++.|+.+....
T Consensus 259 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 23334455678999999999999999999999999999886543
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=398.97 Aligned_cols=252 Identities=17% Similarity=0.249 Sum_probs=190.0
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC--CceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP--FNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lV~ 465 (680)
.+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+++. ...+|||
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccc------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 47899999999999998 58899999986432 112234456777788999999999999986542 1468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE-----LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~-----~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
|||++|+|.++++.. .++|..+++|+.|+|+||+|||+. ..++||||||||+|||||+++++||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999999753 589999999999999999999986 357999999999999999999999999999987
Q ss_pred cCCCCCcc-------cccccCCCCC-----------CCCCCCCeeehhHHHHHHHhCCCCCCcccc------------cc
Q 005734 541 ALPKSKVS-------DDIENSVLPP-----------LADPETNIYSFGILMLEIISGKLPYCEEKE------------LS 590 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~-----------~~s~~sDVySfGvvllElltG~~p~~~~~~------------~~ 590 (680)
........ ...+.|.+|+ .+++++|||||||++|||+||+.|+....+ ..
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 65332111 1122333333 246689999999999999999877642211 11
Q ss_pred HHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 591 IEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
........... .++|.+.. ...+++..+.+|+.+||+.||++||||.||+++|+++.+.
T Consensus 238 ~~~~~~~~~~~------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 238 VEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcc------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 22222222111 12233321 1235667899999999999999999999999999998654
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-48 Score=407.26 Aligned_cols=258 Identities=17% Similarity=0.267 Sum_probs=199.3
Q ss_pred HHHHHhhhhccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC-Ccccceee
Q 005734 379 ELDTACEDFSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-KNFVNLIG 451 (680)
Q Consensus 379 ~l~~~~~~~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g 451 (680)
|+......+.+.||+|+||+||+|++. .++.||||++..... ....++|.+|+++|.+++| ||||+++|
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~----~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC----hHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 343333344589999999999999864 236799998864432 2345789999999999965 89999999
Q ss_pred EEecCCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 005734 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517 (680)
Q Consensus 452 ~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDl 517 (680)
+|.+.+. ..+||||||++|+|.++|+... ...++|.+++.|+.|||+||+|||+. +||||||
T Consensus 136 ~~~~~~~-~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 136 ACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EECCTTS-CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCC-EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 9976542 4689999999999999997432 24589999999999999999999998 9999999
Q ss_pred CCCCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcc
Q 005734 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEE 586 (680)
Q Consensus 518 Kp~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~ 586 (680)
||+|||+++++.+||+|||+|+......... ...||......++.++|||||||++|||+| |+.||.+.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999998765332211 122333334578999999999999999998 99999865
Q ss_pred cc-ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 587 KE-LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 587 ~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
.. ..+...+....+. ..++.++.++.+++.+||+.||++||||.||+++|+++.+...
T Consensus 292 ~~~~~~~~~i~~g~~~-------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 292 KIDEEFCRRLKEGTRM-------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp CCSHHHHHHHHHTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCCCC-------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 42 2223333221111 1122234678999999999999999999999999999876553
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=390.96 Aligned_cols=239 Identities=14% Similarity=0.224 Sum_probs=188.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||++...... ....+.|.+|+++|++++|||||++++++.+++ ..||||||
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yiVmEy 104 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYIVMDY 104 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC---HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEEeC
Confidence 7899999999999997 47999999999765422 334568999999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
|++|+|.+++..+....+++.+...|+.||+.||+|||+. +||||||||+||||++++.+||+|||+|+......
T Consensus 105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 9999999999866666789999999999999999999998 99999999999999999999999999998765321
Q ss_pred ------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 546 ------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 546 ------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
+.....||......++.++||||+||++|||+||+.||.+.....+ +........ . ..+..
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~~~i~~~~~--~--------~~~~~ 248 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL---VLKIISGSF--P--------PVSLH 248 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHTCC--C--------CCCTT
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---HHHHHcCCC--C--------CCCcc
Confidence 1112223434445678999999999999999999999987543333 333322211 0 01112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||++|+++.
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23678899999999999999999999863
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-46 Score=380.20 Aligned_cols=244 Identities=21% Similarity=0.326 Sum_probs=185.7
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC--CCCceEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD--EPFNRMM 463 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~l 463 (680)
|.+.||+|+||+||+|... ++..||||++..... .....+.|.+|++++++++|||||++++++.+. .....+|
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 4567999999999999974 688999999865432 234456799999999999999999999998652 1114689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcccccccccC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIAL 542 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla~~~~ 542 (680)
|||||++|+|.+++... ..+++.....|+.||+.||+|||+. .++|+||||||+|||+++ ++.+||+|||+|+...
T Consensus 107 vmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999999643 4699999999999999999999987 234999999999999984 7999999999998754
Q ss_pred CCCCcc-cccccCCCC----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 543 PKSKVS-DDIENSVLP----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 543 ~~~~~~-~~~~~~~~~----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
...... ...+.|.+| +.+++++|||||||++|||+||+.||.+... ............. ....+
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~~~~~i~~~~~--~~~~~------- 252 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVK--PASFD------- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTCC--CGGGG-------
T ss_pred CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHHHHHHHHcCCC--CCCCC-------
Confidence 322111 112233332 3578899999999999999999999975432 2222222222111 11111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+|+.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112256889999999999999999999975
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=386.28 Aligned_cols=240 Identities=13% Similarity=0.174 Sum_probs=191.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++..... +.+|++++++++|||||++++++.+++ ..|||||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmE 130 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGP--WVNIFME 130 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----------HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEe
Confidence 378999999999999974 789999999865321 247999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~~ 545 (680)
||++|+|.++++.. ..+++.....|+.||+.||+|||+. +||||||||+||||+.++ .+||+|||+|+......
T Consensus 131 y~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred ccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999999654 3699999999999999999999998 999999999999999987 69999999998765321
Q ss_pred C-------------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 546 K-------------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 546 ~-------------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
. .....||......++.++|||||||++|||+||+.||.+.....+...+.. .+...
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~---~~~~~------- 275 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS---EPPPI------- 275 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH---SCCGG-------
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc---CCCCc-------
Confidence 1 111223333445678999999999999999999999986554443333322 21111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
...+.....++.+++.+||+.||++|||+.|+++.|......
T Consensus 276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 112223346789999999999999999999999998877543
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=384.62 Aligned_cols=236 Identities=19% Similarity=0.264 Sum_probs=190.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+++ ..||||||
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy 152 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 152 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEECC
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh-----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeC
Confidence 78999999999999975 7999999999754322 2345889999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+++.. ..+++.+...|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+........
T Consensus 153 ~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 153 LEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp CTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred CCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence 999999999964 3599999999999999999999998 9999999999999999999999999999887533221
Q ss_pred c---cc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S---DD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~---~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. .. .||......++.++||||+||++|||+||+.||.+.........+...... .+. ....
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--~~~---------~~~~ 295 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--RLK---------NLHK 295 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC--CCS---------CGGG
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--CCC---------cccc
Confidence 1 11 233333456799999999999999999999999876544444433322111 000 1112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||++|+++.
T Consensus 296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 296 VSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 23678899999999999999999999863
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=384.68 Aligned_cols=236 Identities=19% Similarity=0.257 Sum_probs=190.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+++ ..||||||
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVmEy 229 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 229 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-----HHHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEEeC
Confidence 78999999999999974 7999999999755422 2345889999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+++... .+++.+...|+.||+.||+|||+. +||||||||+||||+.++.+||+|||+|+........
T Consensus 230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 9999999999643 589999999999999999999999 9999999999999999999999999999876533221
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...||......++.++||||+||++|||+||+.||.+.........+...... .+. ....
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--~~~---------~~~~ 372 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--RLK---------NLHK 372 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--CCS---------CTTS
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--CCc---------cccc
Confidence 1 11233333456789999999999999999999999876544444433322111 000 0112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||++|+++.
T Consensus 373 ~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 373 VSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 23678899999999999999999999863
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=363.47 Aligned_cols=237 Identities=16% Similarity=0.273 Sum_probs=178.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .+|+.||||++....... ......+.+|++++++++|||||++++++.+++ ..++|||
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ivmE 93 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVIE 93 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEEEe
Confidence 38999999999999997 479999999987543221 233567999999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|| +|+|.+++..+ ..+++.+...++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.......
T Consensus 94 y~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 94 YA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 99 68999999654 3699999999999999999999998 999999999999999999999999999987653221
Q ss_pred cc--cccccCCC-----CC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--DDIENSVL-----PP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--~~~~~~~~-----~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...+.|.+ .. +.++++||||+||++|||+||+.||.+.....+.+ ........+. .
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~---~i~~~~~~~p-----------~ 233 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK---NISNGVYTLP-----------K 233 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCCCC-----------T
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHcCCCCCC-----------C
Confidence 11 11233332 22 34688999999999999999999998654333322 2222211111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 234 ~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 122578899999999999999999999873
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=370.17 Aligned_cols=236 Identities=18% Similarity=0.269 Sum_probs=189.2
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .+|+.||||++...... .....+.+.+|+++|++++|||||++++++.+++ ..|||||
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yivmE 112 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHII--KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFGLS 112 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEe
Confidence 38999999999999997 47899999998754321 1223467999999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++... ..++......|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+.......
T Consensus 113 y~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 113 YAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred cCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999999643 3699999999999999999999999 999999999999999999999999999998753221
Q ss_pred cc-----cccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 VS-----DDIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~~-----~~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...+.|.+| ..++.++||||+||++|||+||+.||.+.....+.. ........+.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~---~i~~~~~~~p---------- 254 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA---KIIKLEYDFP---------- 254 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCCCC----------
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHcCCCCCC----------
Confidence 11 122334333 457889999999999999999999998654333333 2222221111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDII 646 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~ 646 (680)
+....++.+|+.+|++.||++|||++|+.
T Consensus 255 -~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 255 -EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11225788999999999999999999874
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=367.91 Aligned_cols=231 Identities=15% Similarity=0.174 Sum_probs=176.2
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||+||+|+. .+++.||||++....... .....+.+|+++|++++|||||++++++.+++ ..|+
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~i 103 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV---RDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KLYL 103 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE---EECC------CCCCCCCCTTEECEEEEEEETT--EEEE
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh---HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEE
Confidence 38999999999999986 257889999986543221 11235889999999999999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|||||++|+|.+++... ..+++.+...++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999999999643 3699999999999999999999998 999999999999999999999999999987543
Q ss_pred CCCc---ccccccC-----CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKV---SDDIENS-----VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~---~~~~~~~-----~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.... ....+.| .....++.++||||+||++|||+||+.||.+.....+... .......+
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~---i~~~~~~~---------- 245 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM---ILKAKLGM---------- 245 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHCCCCC----------
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH---HHcCCCCC----------
Confidence 2211 1112333 3345678999999999999999999999987554333332 22221111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+|+.+||+.||++|||+
T Consensus 246 -p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 246 -PQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 11223578899999999999999984
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=359.25 Aligned_cols=237 Identities=12% Similarity=0.236 Sum_probs=174.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC--------
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF-------- 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-------- 459 (680)
+.||+|+||+||+|+.. +|+.||||++..... ....+.|.+|+++|++++|||||++++++.+.+..
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~----~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 89999999999999974 789999999876542 23456799999999999999999999998754321
Q ss_pred --ceEEEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 460 --NRMMVFEYAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 460 --~~~lV~ey~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
..|+|||||++|+|.+++..+. ....++...+.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCc
Confidence 2589999999999999997543 23467788899999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCc--------------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHH
Q 005734 537 FTTIALPKSKV--------------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596 (680)
Q Consensus 537 la~~~~~~~~~--------------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~ 596 (680)
+|+........ ....||......++.++|||||||++|||++ ||.... +....+.
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~~~~~~~ 238 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--ERVRTLT 238 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--HHHHHHH
Confidence 99886532111 1112333334567899999999999999997 775432 1112222
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..... ... + ..........+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~--~~p----~----~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DVRNL--KFP----P----LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHTT--CCC----H----HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcC--CCC----C----CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 21111 111 0 11222345678999999999999999999986
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=355.33 Aligned_cols=275 Identities=24% Similarity=0.515 Sum_probs=221.3
Q ss_pred CCCCCCHHHHHHHhhhhc--cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccc
Q 005734 371 GVPKLNRLELDTACEDFS--NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVN 448 (680)
Q Consensus 371 ~~~~~~~~~l~~~~~~~~--~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~ 448 (680)
....++..++...+++|. +.||+|+||.||+|+..+|+.||||++...... .....|.+|++++++++||||++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ----GGELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc----hHHHHHHHHHHHHHhccCCCccc
Confidence 345678888888888887 899999999999999888999999998654321 12236899999999999999999
Q ss_pred eeeEEecCCCCceEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 005734 449 LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526 (680)
Q Consensus 449 l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 526 (680)
++++|...+ ..++||||+++|+|.+++.... ...++|..+..|+.+++.||+|||+.+.++|+||||||+|||+++
T Consensus 92 ~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~ 169 (326)
T 3uim_A 92 LRGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE 169 (326)
T ss_dssp CCEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred eEEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence 999998877 6699999999999999997543 345999999999999999999999988889999999999999999
Q ss_pred CCCeEEcccccccccCCCCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCc-----cccccHH
Q 005734 527 DYAAKVAEICFTTIALPKSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCE-----EKELSIE 592 (680)
Q Consensus 527 ~~~~ki~DFGla~~~~~~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~-----~~~~~~~ 592 (680)
++.+||+|||+++......... ...|+......+++++||||||+++|||+||+.||.. .......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 9999999999998764322111 1112222233467889999999999999999999962 2334556
Q ss_pred HHHHHHhcCCCCcccccCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 593 KWAADYLNEPRNFSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 593 ~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
+|+...... .......+..+. ....+...++.+++.+||+.||++|||++||+++|++.
T Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 250 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHTTTTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 666555444 344555555554 46678889999999999999999999999999999874
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=352.12 Aligned_cols=265 Identities=21% Similarity=0.481 Sum_probs=212.4
Q ss_pred HHhhhhc--cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 382 TACEDFS--NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 382 ~~~~~~~--~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
.++++|. +.||+|+||.||+|+..+|+.||||++..... ...+.|.+|++++++++||||++++++|.+.+
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 108 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-----QGIEEFETEIETLSFCRHPHLVSLIGFCDERN-- 108 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-----SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT--
T ss_pred HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--
Confidence 3445554 89999999999999998899999998865432 23457899999999999999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF 537 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGl 537 (680)
..++||||+++|+|.+++.... ...++|..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 6799999999999999997543 24699999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc---ccHHHHHHHHhcCCCC
Q 005734 538 TTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE---LSIEKWAADYLNEPRN 604 (680)
Q Consensus 538 a~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~---~~~~~~~~~~~~~~~~ 604 (680)
++......... ...|+......++.++||||||+++|||+||+.||....+ .....|....... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 264 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQ 264 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT-TC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc-cc
Confidence 98654221110 1112222234568899999999999999999999975332 3345554443332 34
Q ss_pred cccccCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 605 FSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 605 ~~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
+...+++.+. ....+...++.+++.+||+.||++|||+.||++.|+.+.....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 5556666554 4567888999999999999999999999999999999877543
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=358.17 Aligned_cols=252 Identities=10% Similarity=0.115 Sum_probs=188.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~ 462 (680)
.+.||+|+||+||+|+. .+|+.||||++...... ....+.+.+|+++|++++|||||++++++.... ....|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV---VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS---HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccc---hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 38999999999999997 47999999998643321 234567889999999999999999999986432 12579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
||||||+ |+|.+++... ..+++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+...
T Consensus 136 ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 136 VVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 9999995 7899999643 4799999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCC-------cccccccCCC-----C-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC-cccc
Q 005734 543 PKSK-------VSDDIENSVL-----P-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN-FSCM 608 (680)
Q Consensus 543 ~~~~-------~~~~~~~~~~-----~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 608 (680)
.... .....+.|.+ . .+++.++||||+||++|||+||+.||.+....+....+......+.. ....
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 2211 0111222322 2 35688999999999999999999999876655555544443332211 0000
Q ss_pred cCc--------ccC---CC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 609 IDP--------SLK---SF-----KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 609 ~d~--------~l~---~~-----~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.. .+. .. ......++.+|+.+|+..||++|||++|+++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 000 00 01123578899999999999999999999874
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=337.38 Aligned_cols=276 Identities=21% Similarity=0.432 Sum_probs=219.1
Q ss_pred CCCCCHHHHHHHhhhhc--------cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC
Q 005734 372 VPKLNRLELDTACEDFS--------NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH 443 (680)
Q Consensus 372 ~~~~~~~~l~~~~~~~~--------~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H 443 (680)
...|++.++..++.+|+ +.||+|+||.||+|+. ++..||||++...... ......+.|.+|++++++++|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI-TTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTS-CTTTHHHHHHHHHHHHHHCCC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCc-chHHHHHHHHHHHHHHHhcCC
Confidence 45688999999999986 5699999999999987 5789999988643211 112345679999999999999
Q ss_pred CcccceeeEEecCCCCceEEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005734 444 KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522 (680)
Q Consensus 444 ~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~-~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NI 522 (680)
|||+++++++.+.+ ..++||||+++|+|.+++... ....++|..+++|+.++++||+|||+. +|+||||||+||
T Consensus 90 ~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Ni 164 (307)
T 2nru_A 90 ENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANI 164 (307)
T ss_dssp TTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred CCeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHE
Confidence 99999999998877 679999999999999999643 245699999999999999999999998 999999999999
Q ss_pred eecCCCCeEEcccccccccCCCCCcc-----cccccCCCC----CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HH
Q 005734 523 YLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVLP----PLADPETNIYSFGILMLEIISGKLPYCEEKELS-IE 592 (680)
Q Consensus 523 Lld~~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~ 592 (680)
++++++.+||+|||+++......... ...+.+..| +.++.++||||||+++|||+||+.||....... ..
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 99999999999999998764321110 011122221 246788999999999999999999997644322 23
Q ss_pred HHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 593 KWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 593 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..........+...+++.+..........+.+++.+||+.+|++|||+++|++.|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 33333333334445556666666777888999999999999999999999999999998753
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=346.15 Aligned_cols=248 Identities=17% Similarity=0.305 Sum_probs=197.5
Q ss_pred ccccCCCCCCeEEEEEe--------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC
Q 005734 388 SNIIDTQSGCTIYKGTL--------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~--------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 458 (680)
.+.||+|+||.||+|+. .++..||||++..... ....+++.+|+++++++ +|||||+++++|.+.+
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~- 160 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT----EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG- 160 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB----HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS-
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC----HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC-
Confidence 48999999999999985 2456799999864432 33456799999999999 8999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 524 (680)
..++||||+++|+|.+++.... ...+++..+++++.||++||+|||+. +|+||||||+|||+
T Consensus 161 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 161 -PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp -SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred -CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 6799999999999999997543 23589999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHH
Q 005734 525 TDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEK 593 (680)
Q Consensus 525 d~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~ 593 (680)
+.++.+||+|||+++......... ...|+......++.++|||||||++|||+| |+.||.+.....+..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999999999999998664322111 112333334567889999999999999999 999998765444444
Q ss_pred HHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 594 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
.+...... ..+..+..++.+++.+||+.+|++||++.|+++.|+++.....
T Consensus 317 ~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 317 LLKEGHRM-------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HHHTTCCC-------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHhcCCCC-------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 33221111 1112233678999999999999999999999999999876543
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=360.88 Aligned_cols=245 Identities=13% Similarity=0.141 Sum_probs=189.7
Q ss_pred hhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhh-HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 385 EDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDW-LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 385 ~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
++|. ++||+|+||.||+|+.. +|+.||||++........ ..........++++++.++|||||++++++.+.+ .
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--~ 266 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--K 266 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--E
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--E
Confidence 3454 89999999999999975 799999999975432211 1122233445577888889999999999999887 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.|+|||||++|+|.++|... ..++......++.||+.||+|||+. +||||||||+|||||.++.+||+|||+|+.
T Consensus 267 lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 89999999999999999643 3699999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCc-ccccccCCC------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 541 ALPKSKV-SDDIENSVL------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 541 ~~~~~~~-~~~~~~~~~------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
....... ....+.|.+ ...++.++||||+||++|||+||+.||.+....+..+...........+.
T Consensus 342 ~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p------- 414 (689)
T 3v5w_A 342 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP------- 414 (689)
T ss_dssp CSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC-------
T ss_pred cCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC-------
Confidence 7543221 122233333 23578899999999999999999999986544444444443333322211
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
.....++.+|+.+|++.||++|++ ++||.+
T Consensus 415 ----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 ----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 112367889999999999999998 677765
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=335.05 Aligned_cols=248 Identities=19% Similarity=0.320 Sum_probs=190.6
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||+||+|+. +|..||||++...... ....++|.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 115 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFH---AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTEY 115 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCS---HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEEEC
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEEec
Confidence 38999999999999987 5888999998654322 344567999999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 468 APNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPP--VAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+++|+|.+++.... ...+++..++.++.|+++||+|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 99999999997543 12489999999999999999999998 6 999999999999999999999999999765432
Q ss_pred CC--------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SK--------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~--------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. .....|+......+++++||||||+++|||+||+.||...........+...... . ..
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~-~-----------~~ 260 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR-L-----------EI 260 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCC-C-----------CC
T ss_pred ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-C-----------CC
Confidence 11 1112233334456788999999999999999999999865433333222211111 1 11
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+.....++.+++.+||+.+|++|||++++++.|+.+....
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 1223367899999999999999999999999999997654
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=346.56 Aligned_cols=244 Identities=17% Similarity=0.332 Sum_probs=187.4
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+.. ++..||||++..... ....++|.+|++++++++|||||+++|+|.+.+ ..++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 123 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT----EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMI 123 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEE
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceEE
Confidence 489999999999999874 577899999865431 344678999999999999999999999998877 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.++++.. ...+++.+++.|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999999743 34699999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ...|+......+++++|||||||++|||+| |+.||.......+...+......+
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~--------- 270 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP--------- 270 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECC---------
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---------
Confidence 21111 112222223457888999999999999998 999997655444333332221111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..++.++.+++.+||+.+|++||+|++|++.|+++..
T Consensus 271 ----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 271 ----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 111233678999999999999999999999999999864
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-39 Score=338.71 Aligned_cols=248 Identities=17% Similarity=0.329 Sum_probs=195.6
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|... .+..||||++..... ....+.|.+|++++++++||||+++++++.+++ ..++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 127 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT----ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LAMI 127 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CCEE
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--ccEE
Confidence 389999999999999984 345699999864332 344568999999999999999999999998877 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.++++... ..+++..++.|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 999999999999996443 4699999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ...|+......++.++||||||+++|||+| |+.||.......+...+......+
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 274 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP--------- 274 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---------
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCC---------
Confidence 22111 111222222456788999999999999999 999997655443333332211110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
.+...+.++.+++.+||+.||++|||+.+|++.|+.+......
T Consensus 275 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 275 ----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred ----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 1122336789999999999999999999999999999876544
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=341.61 Aligned_cols=181 Identities=13% Similarity=0.244 Sum_probs=149.6
Q ss_pred cccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++|.++ +|||||++++++.+.+ ..++
T Consensus 27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--~~~l 97 (361)
T 4f9c_A 27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--HVVI 97 (361)
T ss_dssp EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--EEEE
T ss_pred EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--EEEE
Confidence 89999999999999853 56789999885432 134578999999998 6999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEcccccccccC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTTIAL 542 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~~~~ 542 (680)
|||||++|+|.+++. .+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 98 vmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 98 AMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 999999999999984 489999999999999999999998 99999999999999877 799999999998654
Q ss_pred CCCCc-------------------------------ccccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCc
Q 005734 543 PKSKV-------------------------------SDDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCE 585 (680)
Q Consensus 543 ~~~~~-------------------------------~~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~ 585 (680)
..... ....+.|.+| ..++.++||||+||+++||+||+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 21100 0011223222 2468889999999999999999999964
Q ss_pred c
Q 005734 586 E 586 (680)
Q Consensus 586 ~ 586 (680)
.
T Consensus 250 ~ 250 (361)
T 4f9c_A 250 A 250 (361)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=350.75 Aligned_cols=244 Identities=18% Similarity=0.293 Sum_probs=195.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +++.||||++..... .....+|.+|++++++++|||||+++|+|...+ ..++|||
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 192 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP----PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVME 192 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC----HHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEE
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCC----HHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEEEE
Confidence 489999999999999986 789999998864321 234567999999999999999999999998877 5699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++.. ...+++..+++++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999999743 23589999999999999999999998 999999999999999999999999999986543211
Q ss_pred cc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 VS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.. ...|+......++.++|||||||++|||+| |+.||.........+.+...... .
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------------~ 335 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL-------------P 335 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCC-------------C
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------C
Confidence 10 112222222456788999999999999999 99999865544333333221111 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..++.++.+++.+||+.||++|||+++|++.|+++.+
T Consensus 336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 112234678999999999999999999999999999865
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=355.10 Aligned_cols=245 Identities=16% Similarity=0.271 Sum_probs=197.4
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|...++..||||++..... ..++|.+|++++++++|||||++++++.. + ..++|||
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~e 262 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM------SVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITE 262 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEEC
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCc------cHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEEe
Confidence 3489999999999999998889999999865331 24579999999999999999999999873 3 4699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.++++......+++..+++++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999999755444689999999999999999999998 999999999999999999999999999987642211
Q ss_pred ---------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 ---------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ---------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.....|+......++.++|||||||++|||+| |+.||.+....++...+......+ .
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-------------~ 406 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP-------------R 406 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC-------------C
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-------------C
Confidence 01122333333567889999999999999999 999998655444444333221111 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+..++.++.+++.+||+.||++||||++|++.|+++....
T Consensus 407 ~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 407 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 1223468899999999999999999999999999986544
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=357.37 Aligned_cols=240 Identities=20% Similarity=0.258 Sum_probs=190.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+ ..+||||
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~iv~E 234 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMIYE 234 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEe
Confidence 489999999999999974 79999999986543 223457889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC--CCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD--YAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~--~~~ki~DFGla~~~~~~ 544 (680)
||++|+|.+++..+ ...+++.+...++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 235 ~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 235 FMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp CCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred ecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 99999999999643 34699999999999999999999999 99999999999999854 88999999999987644
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...||......++.++||||+||++|||++|+.||.+.........+ ......+. ++....
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i---~~~~~~~~---~~~~~~-- 382 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV---KSCDWNMD---DSAFSG-- 382 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH---HTTCCCCC---SGGGTT--
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HhCCCCCC---cccccC--
Confidence 3221 12233334456788999999999999999999999875543333322 22211111 111111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||+.|+++.
T Consensus 383 --~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 --ISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp --SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 22578899999999999999999999863
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=330.94 Aligned_cols=252 Identities=17% Similarity=0.224 Sum_probs=198.1
Q ss_pred CCCCHHHHHHHhhh----------h--ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHH
Q 005734 373 PKLNRLELDTACED----------F--SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLS 439 (680)
Q Consensus 373 ~~~~~~~l~~~~~~----------~--~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~ 439 (680)
+.++..++..+++. | .+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~ 97 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-----RRELLFNEVVIMR 97 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----SHHHHHHHHHHHT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh-----HHHHHHHHHHHHH
Confidence 45778888877764 2 268999999999999986 7999999998654322 2456889999999
Q ss_pred cCCCCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 440 RINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 440 ~l~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
+++|||||++++++...+ ..++||||+++|+|.+++.. ..++|..+..++.++++||+|||+. +|+||||||
T Consensus 98 ~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp 169 (321)
T 2c30_A 98 DYQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKS 169 (321)
T ss_dssp TCCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred hCCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCH
Confidence 999999999999999877 78999999999999999863 3599999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccH
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSI 591 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~ 591 (680)
+||+++.++.+||+|||+++......... ...|+......+++++||||||+++|||+||+.||........
T Consensus 170 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~ 249 (321)
T 2c30_A 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 249 (321)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred HHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999999999998765322111 1223333445678899999999999999999999976543333
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+...... ... .......++.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~--~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 MKRLRDSPPP--KLK---------NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHSSCC--CCT---------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHhcCCCC--CcC---------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3332221111 000 011223578899999999999999999999863
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=332.23 Aligned_cols=240 Identities=17% Similarity=0.253 Sum_probs=192.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||+|++.... ....+.|.+|++++++++||||+++++++.+++ ..++|||
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 87 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-----EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFITE 87 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEEE
Confidence 389999999999999975 68999999875432 345678999999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...++|.+++.|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 88 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 88 YIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp CCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 99999999999753 34699999999999999999999998 999999999999999999999999999987643211
Q ss_pred c----------------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc------ccHHHHHHHH
Q 005734 547 V----------------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE------LSIEKWAADY 598 (680)
Q Consensus 547 ~----------------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~------~~~~~~~~~~ 598 (680)
. ....|+......+++++||||||+++|||+||..|+..... ..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc
Confidence 1 01223333445678899999999999999999999864221 1111111111
Q ss_pred hcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 599 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+..++.++.+++.+||+.||++|||++++++.|+++...
T Consensus 244 -----------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 -----------------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp -----------------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0112224688999999999999999999999999998653
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=362.71 Aligned_cols=245 Identities=15% Similarity=0.285 Sum_probs=198.4
Q ss_pred hhccccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 386 DFSNIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.+.+.||+|+||.||+|+... +..||||++..... ..++|.+|++++++++|||||+++|+|.+.+ ..++|
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv 294 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 294 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEE
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc------chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEE
Confidence 345899999999999999864 88999999865431 2457999999999999999999999998877 56999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
||||++|+|.++++......+++..++.|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 9999999999999866666799999999999999999999998 9999999999999999999999999999876532
Q ss_pred CCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 545 SKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 545 ~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
.... ...|+......++.++|||||||++|||+| |+.||.+.....+.+.+....+.
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------- 438 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM------------- 438 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC-------------
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------
Confidence 2111 111222222456788999999999999999 99999876544554444322111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+..++.++.+|+.+||+.||++||||.+|++.|+.+..
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1122334678999999999999999999999999998753
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=343.86 Aligned_cols=266 Identities=17% Similarity=0.286 Sum_probs=200.6
Q ss_pred hccccCCCCCCeEEEEEeC--------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC
Q 005734 387 FSNIIDTQSGCTIYKGTLS--------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE 457 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~--------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 457 (680)
+.+.||+|+||.||+|+.. ++..||||++..... ....+++.+|+++++++ +|||||+++++|..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT----EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC----HHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 3489999999999999852 345799998865432 33456799999999999 8999999999999877
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIY 523 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 523 (680)
..++||||+++|+|.+++.... ...+++..+++|+.|+++||+|||+. +|+||||||+|||
T Consensus 149 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 149 --PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred --ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 5799999999999999997543 24599999999999999999999998 9999999999999
Q ss_pred ecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHH
Q 005734 524 LTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIE 592 (680)
Q Consensus 524 ld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~ 592 (680)
+++++.+||+|||+++......... ...|+......++.++|||||||+++||+| |+.||.......+.
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~ 303 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999999998764321111 112333334567889999999999999999 99999765433333
Q ss_pred HHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCCCCCChhHHHHH
Q 005734 593 KWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAEL 672 (680)
Q Consensus 593 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~~~~~~~~~~~~ 672 (680)
+.+...... . .+.....++.+++.+||+.+|++|||++||++.|+++......+........++.+.
T Consensus 304 ~~~~~~~~~----~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T 3tt0_A 304 KLLKEGHRM----D---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHDY 370 (382)
T ss_dssp HHHHTTCCC----C---------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC------------
T ss_pred HHHHcCCCC----C---------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCCCccccccC
Confidence 333221111 0 111223678999999999999999999999999999998888877777766666665
Q ss_pred Hh
Q 005734 673 EI 674 (680)
Q Consensus 673 ~~ 674 (680)
.+
T Consensus 371 ~~ 372 (382)
T 3tt0_A 371 DI 372 (382)
T ss_dssp --
T ss_pred CC
Confidence 54
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-39 Score=351.61 Aligned_cols=243 Identities=19% Similarity=0.326 Sum_probs=196.0
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|... |+.||||+++... ..++|.+|++++++++|||||+++++|.+.+. ..++||||
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e~ 268 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 268 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEEC
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEEe
Confidence 389999999999999986 7799999986432 23579999999999999999999999876542 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+++.......+++..+++++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 345 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 345 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccC
Confidence 9999999999866555689999999999999999999998 9999999999999999999999999999865422111
Q ss_pred c-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 548 S-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 ~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
. ...|+......++.++|||||||++|||+| |+.||......++...+....+. ..+..++
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-------------~~p~~~~ 412 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-------------DAPDGCP 412 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCC-------------CCCTTCC
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------CCCCcCC
Confidence 1 222333334567889999999999999999 99999876545554443322111 1122334
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 6889999999999999999999999999998654
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=323.91 Aligned_cols=243 Identities=16% Similarity=0.294 Sum_probs=194.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++..... ..+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 86 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEF 86 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEEC
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEeccccc------CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEEe
Confidence 389999999999999998899999999865432 1346899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.... ..+++..++.++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 87 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 87 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999996433 4689999999999999999999998 9999999999999999999999999999876422110
Q ss_pred ---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 ---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
....|+......+++++||||+|++++||+| |+.||...........+...... .. +
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~-------~~------~ 229 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL-------YK------P 229 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-------CC------C
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccC-------CC------C
Confidence 1122333333467889999999999999999 99999865433333322221110 00 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.....++.+++.+||+.+|++||++++++++|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11236789999999999999999999999999998753
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=353.78 Aligned_cols=248 Identities=16% Similarity=0.265 Sum_probs=195.1
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|...++..||||++..... ..++|.+|++++++++|||||++++++.+ + ..++|||
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~e 258 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTE 258 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEEC
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEeh
Confidence 3489999999999999998888899999865331 13579999999999999999999999976 3 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++.......+++..+++++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999999754445699999999999999999999998 999999999999999999999999999987643211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....|+......++.++|||||||++|||+| |+.||.+....++...+....+. ..
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-------------~~ 402 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-------------PC 402 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-------------CC
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------CC
Confidence 1 1122333333467889999999999999999 99999865433333333221111 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
+..++..+.+++.+||+.+|++|||+++|++.|+++......+
T Consensus 403 ~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 1233467899999999999999999999999999987655443
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=334.84 Aligned_cols=242 Identities=14% Similarity=0.278 Sum_probs=187.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEE----EEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEI----AVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~v----aVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||+||+|+.. +|+.+ |+|.+.... .....++|.+|++++++++|||||+++++|.++. .++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~ 93 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQL 93 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---EEE
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---eEE
Confidence 89999999999999964 55544 666554221 1234567999999999999999999999998754 589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++.... ..+++..++.|+.++++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999997543 4699999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+......++.++|||||||++|||+| |+.||.......+...+......+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---------- 239 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---------- 239 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC----------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC----------
Confidence 22111 112222233457889999999999999999 999998765555544443321110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+..+..++.+++.+||+.+|++||+|.++++.|+.+..
T Consensus 240 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 240 ---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111223678899999999999999999999999998864
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-38 Score=328.65 Aligned_cols=252 Identities=18% Similarity=0.306 Sum_probs=190.2
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC--CceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP--FNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lV~ 465 (680)
.+.||+|+||+||+|+.. ++.||||++.... .....+..|+.++++++|||||++++++..... ...++||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCc------hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 389999999999999886 7899999986432 233456679999999999999999999987542 1368999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------CCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-------NPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~-------~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
||+++|+|.++++.. .++|..+.+|+.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 102 e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred ecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999999653 4899999999999999999999862 448999999999999999999999999999
Q ss_pred cccCCCCCcc-----cccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCccccc-------------c
Q 005734 539 TIALPKSKVS-----DDIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKEL-------------S 590 (680)
Q Consensus 539 ~~~~~~~~~~-----~~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~-------------~ 590 (680)
+......... ...+.+..| ..++.++|||||||++|||+||+.||.+..+. .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 8765322111 111222222 13345689999999999999999999753221 1
Q ss_pred HHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 591 IEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
...+....... . ..+.+.. .....+.++.+++.+||+.||++|||++||+++|+++...
T Consensus 259 ~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 259 LEDMQEVVVHK-K-----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHTTS-C-----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcc-c-----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11222211111 0 1111111 1234567799999999999999999999999999998654
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=330.50 Aligned_cols=250 Identities=15% Similarity=0.264 Sum_probs=189.8
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||+||+|++ .+|+.||||++.... ....+.|.+|++++++++||||++++++|...+....+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 48999999999999984 368899999986443 33456799999999999999999999999654322469
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..+++++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 90 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999997543 3589999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc------------cHHHHHHHHh
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL------------SIEKWAADYL 599 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~------------~~~~~~~~~~ 599 (680)
...... ...|+......+++++||||||+++|||+||..|+...... ..........
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 321110 11233223345788999999999999999999998643210 0001111111
Q ss_pred cCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 600 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..... ...+..++.++.+++.+||+.||++|||++|++++|+++.+.
T Consensus 246 ~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 246 KNNGR---------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HTTCC---------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hccCc---------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11111 011233447899999999999999999999999999998754
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=334.19 Aligned_cols=247 Identities=15% Similarity=0.256 Sum_probs=194.3
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+.. +++.||||++..... ....+.|.+|++++++++||||++++++|.+.+ ..
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 125 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS----ADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PM 125 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC----HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--ce
Confidence 389999999999999974 347899999864432 334567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKE----------------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~----------------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
++||||+++|+|.+++.... ...+++.+++.|+.++++||+|||+. +|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence 99999999999999997532 25799999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~ 588 (680)
+|||+++++.+||+|||+++........ ....|+......++.++||||||+++|||+| |+.||.+...
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 9999999999999999999765422110 0112222223457889999999999999999 9999976543
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
..+...+. .. .. ...+...+.++.+++.+||+.||++||++.+|++.|+++....
T Consensus 283 ~~~~~~~~---~~-~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 EEVIYYVR---DG-NI---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHH---TT-CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred HHHHHHHh---CC-Cc---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 33332222 11 10 0111223367899999999999999999999999999987543
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=322.09 Aligned_cols=249 Identities=19% Similarity=0.285 Sum_probs=187.4
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||+||+|+.. ++.||||++... ...+.|.+|++++++++||||++++|++.+ ..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e~ 80 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-------SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEY 80 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEEC
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEEc
Confidence 489999999999999985 788999988532 234679999999999999999999999874 34899999
Q ss_pred cCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-eEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKEM-DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA-AKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~-~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-~ki~DFGla~~~~~~~ 545 (680)
+++|+|.+++..... ..+++..+++++.++++||+|||+....+|+||||||+||+++.++. +||+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 999999999975432 35789999999999999999999943348999999999999998876 7999999997654322
Q ss_pred Cc-----ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 546 KV-----SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 546 ~~-----~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.. ....|+......++.++||||||+++|||+||+.||....... .......... .. . ......
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~-~~-~--------~~~~~~ 229 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA-FRIMWAVHNG-TR-P--------PLIKNL 229 (307)
T ss_dssp ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH-HHHHHHHHTT-CC-C--------CCBTTC
T ss_pred ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH-HHHHHHHhcC-CC-C--------Cccccc
Confidence 11 1222344444567889999999999999999999997543221 1111111111 00 0 011122
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
+..+.+++.+||+.||++|||++++++.|+.+....+..
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 357889999999999999999999999999997655443
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=322.69 Aligned_cols=235 Identities=18% Similarity=0.295 Sum_probs=187.4
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.++++++|||||++++++..++ ..++||||
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 98 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEY 98 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeeccccc-----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEEEC
Confidence 7899999999999996 57899999998654322 2356889999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... .+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence 9999999999653 589999999999999999999998 9999999999999999999999999999876533221
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+......+++++|||||||++|||+||+.||...........+...... .. ..+..
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~---------~~~~~ 241 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP--EL---------QNPEK 241 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC--CC---------SCGGG
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CC---------CCccc
Confidence 1 11233333456788999999999999999999999765433222222211111 00 01122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 3367889999999999999999999986
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=338.12 Aligned_cols=252 Identities=16% Similarity=0.299 Sum_probs=188.3
Q ss_pred ccccCCCCCCeEEEEEeC--CC--CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SG--VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g--~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+.. ++ ..||||.+..... ....++|.+|++++++++|||||+++++|...+. ..++
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~l 168 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD----IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLV 168 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC----SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCEE
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeEE
Confidence 478999999999999873 33 3578887754321 2345689999999999999999999999865432 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 169 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 99999999999999643 34689999999999999999999998 999999999999999999999999999986542
Q ss_pred CCCcc------------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 544 KSKVS------------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 544 ~~~~~------------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ...|+......+++++|||||||++|||+| |..||......+....+...... .
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~-------~- 316 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------L- 316 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCC-------C-
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCC-------C-
Confidence 21110 111222223467889999999999999999 67778765544544433221110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCC
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAV 661 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~ 661 (680)
.+..++.++.+++.+||+.+|++||+++|+++.|+++.........
T Consensus 317 -----~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~ 362 (373)
T 3c1x_A 317 -----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 362 (373)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCB
T ss_pred -----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccce
Confidence 1112336789999999999999999999999999999876655443
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=320.82 Aligned_cols=250 Identities=15% Similarity=0.329 Sum_probs=192.3
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|+.. |..||||++...... ....+.|.+|++++++++||||+++++++.+......++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWS---TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCC---HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccC---HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 489999999999999985 888999998764322 3445679999999999999999999999987733367999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..++.|+.|++.||+|||+. .++|+||||||+||++++++.++|+|||++.........
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 169 (271)
T 3kmu_A 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRM 169 (271)
T ss_dssp CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCB
T ss_pred cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecccCcc
Confidence 9999999999866555799999999999999999999987 223999999999999999999999999887654322211
Q ss_pred ---ccccccCCCCCC---CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 548 ---SDDIENSVLPPL---ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 ---~~~~~~~~~~~~---~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
....|+...... .+.++||||||+++|||+||+.||.+........ ........ + ..+....
T Consensus 170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~------~---~~~~~~~ 237 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM---KVALEGLR------P---TIPPGIS 237 (271)
T ss_dssp SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH---HHHHSCCC------C---CCCTTCC
T ss_pred CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH---HHHhcCCC------C---CCCCCCC
Confidence 111222222222 2337999999999999999999997654332222 22211110 0 0112223
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 678999999999999999999999999998754
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=322.19 Aligned_cols=243 Identities=17% Similarity=0.313 Sum_probs=191.2
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++...... .+++.+|++++.+++||||+++++++.+.+ ..++||||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 100 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS------EDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEY 100 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEECC
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC------HHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEec
Confidence 3899999999999999998889999998754321 356899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.... ..+++..++.++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp CTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 99999999997532 4699999999999999999999998 9999999999999999999999999999876422110
Q ss_pred ---------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 ---------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ---------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
....|+......+++++||||||+++|||+| |+.||...........+...... . . +
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~---~----~------~ 243 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL---Y----R------P 243 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC---C----C------C
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCC---C----C------C
Confidence 1112232223456889999999999999999 99999765433333322221111 0 0 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
......+.+++.+||+.+|++|||++++++.|+++.+.
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 11125788999999999999999999999999998753
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=340.05 Aligned_cols=246 Identities=18% Similarity=0.269 Sum_probs=192.2
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+.. ++..||||++..... .....++.+|+.++++++|||||++++++.+.. ..
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~ 149 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS----EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PR 149 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--CC
Confidence 489999999999999953 467899999864322 234567899999999999999999999998877 56
Q ss_pred EEEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKE-----MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~-----~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~ki~ 533 (680)
++||||+++|+|.+++.... ...+++.+++.|+.|+++||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997432 24699999999999999999999998 999999999999999544 59999
Q ss_pred ccccccccCCCCC-----c-----ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSK-----V-----SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~-----~-----~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++....... . ....|+......+++++|||||||++|||+| |+.||.......+...+......
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~- 305 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM- 305 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 9999986431110 0 1112332223457889999999999999998 99999875544433333221111
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..+.....++.+++.+||+.+|++||++.+|++.|+.+...
T Consensus 306 ------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 306 ------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ------------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 01112236788999999999999999999999999988653
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=322.42 Aligned_cols=243 Identities=18% Similarity=0.288 Sum_probs=192.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++...... ..++.+|++++.+++||||+++++++.+.+ ..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 84 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS------EDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVTEY 84 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC------HHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEEC
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCc------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEEEc
Confidence 3899999999999999998889999998654321 346899999999999999999999998777 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ...+++..++.|+.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 85 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 85 ISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp CTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred cCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 9999999999643 23589999999999999999999998 9999999999999999999999999999876533211
Q ss_pred c---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 S---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. ...|+......+++++||||||++++||+| |+.||........... ....... ..+
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~---~~~~~~~----~~~------ 227 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK---VSQGHRL----YRP------ 227 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH---HHTTCCC----CCC------
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH---HHcCCCC----CCC------
Confidence 1 111222222346789999999999999999 9999976543322222 2211110 011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.....++.+++.+||+.+|++|||++|+++.|+.+.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11225788999999999999999999999999988653
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=326.74 Aligned_cols=245 Identities=15% Similarity=0.275 Sum_probs=198.6
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||+|+||.||+|... ++..||||++.... ...+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~ 88 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIIT 88 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS------THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCH------HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEEE
Confidence 3489999999999999986 58889999986433 23467899999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++.......+++..++.++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999999999876666799999999999999999999998 99999999999999999999999999998765332
Q ss_pred Ccc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 546 KVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 546 ~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
... ...|+......++.++||||||+++|||+| |+.||.........+.+.......
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 232 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME------------- 232 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC-------------
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC-------------
Confidence 211 112222223456889999999999999999 999998655444444433221110
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+...+.++.+++.+|++.||++|||+.++++.|+++...
T Consensus 233 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 1122236789999999999999999999999999988653
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=316.76 Aligned_cols=247 Identities=22% Similarity=0.369 Sum_probs=188.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHH--HHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLK--SQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.+.||+|+||+||+|+. .+++.||||++.......... ...+.|.+|++++++++||||+++++++.+.. ++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~lv 99 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP----RMV 99 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT----EEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC----eEE
Confidence 48999999999999997 478999999986544322111 11167999999999999999999999997644 799
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeecCCCC-----eEEccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP--VAHSNLSSHCIYLTDDYA-----AKVAEICF 537 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~-----~ki~DFGl 537 (680)
|||+++|+|.+++... ...+++..++.++.+++.||+|||+. + |+||||||+||+++.++. +||+|||+
T Consensus 100 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 100 MEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999999988644 34799999999999999999999998 6 999999999999988776 99999999
Q ss_pred ccccCCCCCcc-----cccccCC--CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 538 TTIALPKSKVS-----DDIENSV--LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 538 a~~~~~~~~~~-----~~~~~~~--~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
++......... ...|+.. ....+++++||||||+++|||+||+.||........ ........... .
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~--~---- 248 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINMIREEGL--R---- 248 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHHHHHSCC--C----
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHHHhccCC--C----
Confidence 98654322211 1223332 223357789999999999999999999976542222 22222211110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
+ ..+.....++.+++.+||+.||++|||++|+++.|+++
T Consensus 249 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 249 P---TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C---CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 11122346789999999999999999999999999874
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-38 Score=324.86 Aligned_cols=244 Identities=18% Similarity=0.325 Sum_probs=182.0
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHc--CCCCcccceeeEEecCC--CCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR--INHKNFVNLIGYCEDDE--PFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~--~~~~~l 463 (680)
.+.||+|+||+||+|+. +|+.||||++.... ...+.+|.+++.. ++||||+++++++.... ....++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEecccc--------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 38999999999999998 68899999985432 2345566666666 79999999999976532 124689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH--------HELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
||||+++|+|.++++. ..+++..+++|+.+++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999953 36999999999999999999999 55 9999999999999999999999999
Q ss_pred ccccccCCCCCcc-------cccccCCCC-----C------CCCCCCCeeehhHHHHHHHhC----------CCCCCccc
Q 005734 536 CFTTIALPKSKVS-------DDIENSVLP-----P------LADPETNIYSFGILMLEIISG----------KLPYCEEK 587 (680)
Q Consensus 536 Gla~~~~~~~~~~-------~~~~~~~~~-----~------~~s~~sDVySfGvvllElltG----------~~p~~~~~ 587 (680)
|+++......... ...+.+.+| . .+++++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997654322111 111222222 2 234689999999999999999 88885432
Q ss_pred c--ccHHHHHHHHhcCCCCcccccCcccC--CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 588 E--LSIEKWAADYLNEPRNFSCMIDPSLK--SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 588 ~--~~~~~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
. ..... .......... .+.+. ........++.+++.+||+.||++|||+.||++.|+++
T Consensus 238 ~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSFED-MRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCHHH-HHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcchhh-hhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 12222 2222211111 11111 12345678899999999999999999999999999976
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-38 Score=334.91 Aligned_cols=251 Identities=17% Similarity=0.277 Sum_probs=193.6
Q ss_pred hhhhc--cccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEe
Q 005734 384 CEDFS--NIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCE 454 (680)
Q Consensus 384 ~~~~~--~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~ 454 (680)
.++|. +.||+|+||.||+|+. .+++.||||++..... ....+.|.+|++++.++ +|||||+++++|.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC----HHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 34454 8999999999999974 3568899999864332 23456799999999999 7999999999998
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCC----------------------------------------------------
Q 005734 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEM---------------------------------------------------- 482 (680)
Q Consensus 455 ~~~~~~~~lV~ey~~~GsL~~~l~~~~~---------------------------------------------------- 482 (680)
+.+. ..++||||+++|+|.++++....
T Consensus 97 ~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (359)
T 3vhe_A 97 KPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD 175 (359)
T ss_dssp STTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred cCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence 7653 36999999999999999975431
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc--
Q 005734 483 ------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-- 548 (680)
Q Consensus 483 ------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~-- 548 (680)
..+++..+++|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 252 (359)
T 3vhe_A 176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252 (359)
T ss_dssp --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC
T ss_pred hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhc
Confidence 1289999999999999999999998 99999999999999999999999999998764322111
Q ss_pred --------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccccc-HHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 549 --------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELS-IEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 549 --------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
...|+......++.++|||||||++|||+| |+.||.+..... ....+...... . .+.
T Consensus 253 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~--~-----------~~~ 319 (359)
T 3vhe_A 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--R-----------APD 319 (359)
T ss_dssp --CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC--C-----------CCT
T ss_pred cccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCC--C-----------CCC
Confidence 112222223457889999999999999999 999997644222 22222211110 0 111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
....++.+++.+||+.||++||||+||+++|+++...
T Consensus 320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1235789999999999999999999999999998753
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=325.33 Aligned_cols=236 Identities=18% Similarity=0.290 Sum_probs=187.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~e~ 95 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN---PTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYLIMEY 95 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEEC
Confidence 8999999999999997 58999999998654321 334567889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 96 ~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 96 ASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999999999644 3689999999999999999999998 9999999999999999999999999999876533221
Q ss_pred c--cccccCCC-----CC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--DDIENSVL-----PP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--~~~~~~~~-----~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...+.+.+ .. +.++++||||+||++|||+||+.||.+.....+.. .......... ..
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~i~~~~~~~p-----------~~ 236 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE---RVLRGKYRIP-----------FY 236 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCCC-----------TT
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHH---HHHhCCCCCC-----------CC
Confidence 1 11122222 22 33578999999999999999999998754333332 2222211111 11
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+++.+|++.||++|||++|+++.
T Consensus 237 ~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 237 MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22578899999999999999999999864
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=324.08 Aligned_cols=245 Identities=18% Similarity=0.283 Sum_probs=194.6
Q ss_pred ccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+. .++..||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 101 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS----PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PL 101 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC----HHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--ce
Confidence 38899999999999986 3457899999864331 344567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKEM----------------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~----------------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
++||||+++|+|.+++..... ..+++..+++++.++++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999975432 3489999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~ 588 (680)
+||++++++.+||+|||+++......... ...|+......+++++||||||+++|||+| |+.||.+...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999998764322111 111222222346788999999999999999 9999987654
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+...... ..+.....++.+++.+||+.||++||++.|+++.|+++..
T Consensus 259 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ERLFNLLKTGHRM-------------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GGHHHHHHTTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCcC-------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 4444443321111 0111223678999999999999999999999999999865
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=355.28 Aligned_cols=246 Identities=15% Similarity=0.268 Sum_probs=196.7
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|+..++..||||++..... ..++|.+|+++|++++|+|||+++++|.+ + ..++|||
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~e 341 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTE 341 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEEC
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEeee
Confidence 3489999999999999998888899999865331 13579999999999999999999999976 3 4699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.++++......+++.++++|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 99999999999754445699999999999999999999998 999999999999999999999999999987642110
Q ss_pred ---------cccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 ---------VSDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ---------~~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.....|+......++.++|||||||++|||+| |+.||.+....++...+....+. ..
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~-------------~~ 485 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-------------PC 485 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCC-------------CC
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------CC
Confidence 01122333333467889999999999999999 99999865433333333221111 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
+..+..++.+|+.+||+.||++|||+++|++.|+++.....
T Consensus 486 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 12234678999999999999999999999999999865443
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=329.41 Aligned_cols=254 Identities=15% Similarity=0.270 Sum_probs=185.1
Q ss_pred ccccCCCCCCeEEEEEeCCC----CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC----
Q 005734 388 SNIIDTQSGCTIYKGTLSSG----VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF---- 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g----~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---- 459 (680)
.+.||+|+||.||+|+.... ..||||++...... ....++|.+|++++++++||||+++++++......
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA---SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP 104 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccC---HHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence 48999999999999997533 27999988654311 23456799999999999999999999999876521
Q ss_pred ceEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
..++|+||+++|+|.+++... ....+++..+++|+.|+++||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeec
Confidence 128999999999999999643 223699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCC
Q 005734 536 CFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 536 Gla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
|+++......... ...|+......++.++||||||+++|||+| |+.||...........+......
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~--- 258 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL--- 258 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCC---
Confidence 9998764322111 111222223457889999999999999999 99999876544444433221111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCC
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQA 660 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~ 660 (680)
..+.....++.+++.+||+.||++|||+.++++.|+++..-.....
T Consensus 259 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 259 ----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp ----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred ----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 0112223678999999999999999999999999999987655443
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=323.64 Aligned_cols=247 Identities=17% Similarity=0.270 Sum_probs=193.1
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++..... ..+.|.+|++++++++||||+++++++.++ ..++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e~ 88 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITEY 88 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc------cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEEec
Confidence 489999999999999998888999998864331 235689999999999999999999998754 46899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..+++++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 9999999999654334699999999999999999999998 9999999999999999999999999999876532211
Q ss_pred c---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 548 S---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 548 ~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. ...|+......++.++||||||++++||+| |+.||.+.........+...... ..+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~ 232 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRP 232 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-------------CCC
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC-------------CCc
Confidence 1 111222222345778999999999999999 99999765433333322211110 011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
.....++.+++.+|++.+|++|||+.++++.|+++......+
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 274 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQ 274 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC---
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCC
Confidence 122367899999999999999999999999999997655443
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-37 Score=318.12 Aligned_cols=251 Identities=17% Similarity=0.275 Sum_probs=194.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. ++..||||++....... ....+.|.+|++++.+++||||+++++++.+++ ..++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 91 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK--EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYLVME 91 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC--HHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc--HHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEEEEe
Confidence 389999999999999964 78999999986543222 344568999999999999999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 92 YIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp CCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999999644 3699999999999999999999998 999999999999999999999999999987643211
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. ....|+......+++++||||||+++|||+||+.||.+.... ........... ... .. ...
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~---~~~~~~~~~~~--~~~-~~---~~~ 237 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV---SIAIKHIQDSV--PNV-TT---DVR 237 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH---HHHHHHHSSCC--CCH-HH---HSC
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHhhccC--CCc-ch---hcc
Confidence 1 111233333456788999999999999999999999765422 22222222211 000 00 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhccC
Q 005734 618 QNELEAICEVIKECIKTDLRQRP-TMNDIIVQLRQVINIS 656 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RP-tm~ev~~~L~~i~~~~ 656 (680)
...+..+.+++.+|++.||++|| +++++.+.|+.+....
T Consensus 238 ~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 22346789999999999999999 8999999999886543
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=354.99 Aligned_cols=240 Identities=15% Similarity=0.279 Sum_probs=191.7
Q ss_pred ccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.||+|+||.||+|... ++..||||+++.... ....++|.+|+++|++++|||||+++|+|..+ ..++|||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---~~~lv~E 415 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLVME 415 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS----STTHHHHHHHHHHHTTCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC---CeEEEEE
Confidence 7999999999999874 566799999875432 12356799999999999999999999999863 4799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++... ...+++..++.|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 416 ~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 416 MAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp CCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred eCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999643 35699999999999999999999998 999999999999999999999999999987643211
Q ss_pred c-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 V-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. ....|+......++.++|||||||++|||+| |+.||.+....++...+....+ .
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~----~--------- 558 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR----M--------- 558 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCC----C---------
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC----C---------
Confidence 1 1112222223467889999999999999998 9999987654444443332111 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
..+..++.++.+++.+||+.+|++||+|.+|++.|+.+.
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 112234478999999999999999999999999999884
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=324.90 Aligned_cols=249 Identities=17% Similarity=0.305 Sum_probs=194.3
Q ss_pred ccccCCCCCCeEEEEEeC--------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC
Q 005734 388 SNIIDTQSGCTIYKGTLS--------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 458 (680)
.+.||+|+||.||+|+.. ++..||||++..... ....+.+.+|+++++++ +||||++++++|.+.+
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 114 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT----EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG- 114 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc----HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC-
Confidence 489999999999999863 567899999864432 33456799999999999 8999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKEM--------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL 524 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~~--------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 524 (680)
..++||||+++|+|.+++..... ..+++..+++++.++++||+|||+. +|+||||||+||++
T Consensus 115 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 115 -PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp -CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred -ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 67999999999999999975431 3489999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHH
Q 005734 525 TDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEK 593 (680)
Q Consensus 525 d~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~ 593 (680)
+.++.+||+|||+++......... ...|+......++.++||||||+++|||+| |+.||.+.....+..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 270 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence 999999999999998765322111 111222222346788999999999999999 999997654333333
Q ss_pred HHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 594 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
.+...... ..+.....++.+++.+||+.+|++||++.|+++.|+++....+.
T Consensus 271 ~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 271 LLKEGHRM-------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHHHTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHhcCCCC-------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 33221111 01112236789999999999999999999999999999776544
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=333.04 Aligned_cols=259 Identities=11% Similarity=0.140 Sum_probs=189.9
Q ss_pred ccccCCCCCCeEEEEEeCC------CCEEEEEEeeeccchhhH------HHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTLSS------GVEIAVAATAITSSKDWL------KSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~------g~~vaVK~~~~~~~~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
.+.||+|+||.||+|...+ ++.||||++......... ......+..|+..+.+++|+||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 3899999999999999854 478999998654321111 0111245667778889999999999999976
Q ss_pred CCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeE
Q 005734 456 DEP--FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYAAK 531 (680)
Q Consensus 456 ~~~--~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~k 531 (680)
... ...++||||+ +|+|.+++... ...+++..++.|+.|++.||+|||+. +|+||||||+|||++ .++.+|
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~~~k 194 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVY 194 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTTCEE
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCCeEE
Confidence 421 2479999999 99999999753 35799999999999999999999998 999999999999999 889999
Q ss_pred EcccccccccCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHH
Q 005734 532 VAEICFTTIALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWA 595 (680)
Q Consensus 532 i~DFGla~~~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~ 595 (680)
|+|||+++........ ....|+......++.++|||||||++|||+||+.||.+... .......
T Consensus 195 l~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~ 274 (364)
T 3op5_A 195 LVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDS 274 (364)
T ss_dssp ECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHH
T ss_pred EEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHH
Confidence 9999999876422111 11123333344578889999999999999999999985321 2222222
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
...... .+..++++.+. ....+.++.+++..||+.+|++||++++|++.|+++...
T Consensus 275 ~~~~~~--~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 275 KIRYRE--NIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHH--CHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhhh--hHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 221111 12222222221 012236789999999999999999999999999998653
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=319.28 Aligned_cols=243 Identities=15% Similarity=0.257 Sum_probs=183.4
Q ss_pred ccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|.... +..||||+...... ....+.|.+|+.++++++||||+++++++.++ ..++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~l 92 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS----DSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWI 92 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SCEE
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCccceEEEEEccC---ccEE
Confidence 4899999999999998742 45688888754321 33456799999999999999999999998543 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..++.++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999999744 34689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 KSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 ~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
..... ...|+......++.++||||||+++|||+| |+.||......+....+......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~------------ 236 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------------ 236 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC------------
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC------------
Confidence 22111 112222223456788999999999999997 99999866544444433321110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+.++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 237 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0112233678899999999999999999999999999864
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-37 Score=318.81 Aligned_cols=254 Identities=17% Similarity=0.285 Sum_probs=195.0
Q ss_pred cccCCCCCCeEEEEEeC-CC---CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SG---VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g---~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
++||+|+||+||+|+.. ++ ..+|||++..... ....+.|.+|++++++++||||+++++++.+.+. ..++|
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v 101 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE----MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVL 101 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEE
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeecccccc----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEE
Confidence 78999999999999863 22 3689998754321 2345679999999999999999999999986652 34899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||+.+|+|.+++... ...+++..+..|+.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999753 35789999999999999999999998 9999999999999999999999999999865422
Q ss_pred CCc------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCC-CCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 545 SKV------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLP-YCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 545 ~~~------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
... ....|+......+++++||||||+++|||+||..| |......+....+.......
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--------- 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP--------- 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---------
Confidence 110 01112333344678899999999999999996555 44444344444333221110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCCCCC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRL 664 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~~~~ 664 (680)
.+.....++.+++.+||+.+|++|||+++++++|+++..........++
T Consensus 249 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~~~l 297 (298)
T 3pls_A 249 ----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHYVQL 297 (298)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCBCCC
T ss_pred ----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccchhhC
Confidence 0111236789999999999999999999999999999876655544443
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-37 Score=320.16 Aligned_cols=249 Identities=14% Similarity=0.176 Sum_probs=188.5
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
+.||+|+||+||+|+..+|+.||||++...... ......+.+|++++++++|||||++++++.+++ ..++||||+
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~~ 101 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED---EGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLVFEFM 101 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEEEECC
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEeccccc---chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEEEcCC
Confidence 899999999999999988999999998654321 223467889999999999999999999998877 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS 548 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~ 548 (680)
+ |+|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 102 ~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 102 E-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp S-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred C-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 7 5888888643 34699999999999999999999998 99999999999999999999999999998764221111
Q ss_pred --------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccC------c
Q 005734 549 --------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMID------P 611 (680)
Q Consensus 549 --------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d------~ 611 (680)
...|+.... ..++.++|||||||++|||+||+.||.+....+....+......+.. .....+ .
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 112332222 45688999999999999999999999876555555444444333211 110000 0
Q ss_pred cc---CC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 612 SL---KS-----FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 612 ~l---~~-----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.. .. .......++.+++.+|++.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 00 01122357889999999999999999999986
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=322.03 Aligned_cols=249 Identities=20% Similarity=0.312 Sum_probs=195.7
Q ss_pred hccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCC
Q 005734 387 FSNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 459 (680)
+.+.||+|+||.||+|+. .++..||||++..... ....+.+.+|++++.++ +||||+++++++.+++
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-- 100 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG-- 100 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh----HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC--
Confidence 348999999999999985 3567899999864432 23456799999999999 8999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEM----------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIY 523 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~----------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 523 (680)
..++||||+++|+|.+++..... ..+++..+++++.++++||+|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 66999999999999999975432 2589999999999999999999998 9999999999999
Q ss_pred ecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccccc-H
Q 005734 524 LTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELS-I 591 (680)
Q Consensus 524 ld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~-~ 591 (680)
++.++.+||+|||+++......... ...|+......++.++||||||++++||+| |+.||....... .
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 9999999999999998765432211 111222223457888999999999999999 999997654222 2
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
...+...... .. +.....++.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 258 ~~~~~~~~~~------~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 258 YKMIKEGFRM------LS-------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHHTCCC------CC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHhccCCCC------CC-------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 2222221111 00 11223678999999999999999999999999999876554
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=328.27 Aligned_cols=250 Identities=18% Similarity=0.308 Sum_probs=189.7
Q ss_pred ccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 460 (680)
.+.||+|+||.||+|+. .++..||||++..... ....+.+.+|++++.++ +||||+++++++...+ .
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~ 123 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQLGSHENIVNLLGACTLSG--P 123 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC----HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC--c
Confidence 48999999999999996 2456899999864321 23456799999999999 8999999999999877 6
Q ss_pred eEEEEEecCCCChhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEM---------------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~---------------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
.++||||+++|+|.+++..... ..+++..++.++.++++||+|||+. +|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCh
Confidence 7999999999999999975432 3489999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~ 588 (680)
+||+++.++.+||+|||+++......... ...|+......+++++||||||+++|||+| |+.||.+...
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 99999999999999999998764322111 112222223457889999999999999998 9999976542
Q ss_pred cc-HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 589 LS-IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 589 ~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
.. ....+...... ..+.....++.+++.+||+.||++|||+.++++.|+.+....++.
T Consensus 281 ~~~~~~~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 281 DANFYKLIQNGFKM-------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp SHHHHHHHHTTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred HHHHHHHHhcCCCC-------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 22 22222211111 011122367899999999999999999999999999987766554
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-37 Score=323.01 Aligned_cols=246 Identities=20% Similarity=0.344 Sum_probs=189.3
Q ss_pred ccccCCCCCCeEEEEEeCC-----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLSS-----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~-----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+|.... +..||||++..... .....+|.+|++++++++||||+++++++.+.+ ..+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 122 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT----EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMM 122 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEE
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC----HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--CcE
Confidence 3789999999999998742 23599998864331 334567999999999999999999999998876 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... ...+++..++.++.++++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 123 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 999999999999999753 34699999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ....|+......++.++||||||+++|||+| |+.||.......+...+...... .
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~----~---- 270 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL----P---- 270 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC----C----
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcC----C----
Confidence 32111 1112333334567888999999999999999 99999765433333322221111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.+.....++.+++.+||+.+|++||++.++++.|+++....
T Consensus 271 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 271 -----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp -----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred -----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 11123367899999999999999999999999999986543
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=318.58 Aligned_cols=249 Identities=16% Similarity=0.299 Sum_probs=190.1
Q ss_pred ccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||+||+|+..+ +..+|||.+..... ....+.|.+|++++++++||||++++++|...+. ..++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 104 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD----IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLV 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEE
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCC----HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceEE
Confidence 3899999999999999642 23578887754321 2345679999999999999999999999865443 5689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..++.|+.++++||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999643 35689999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcc------------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 544 KSKVS------------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 544 ~~~~~------------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ...|+......+++++||||||++++||+| |..||......+....+...... .
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~----- 252 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL---L----- 252 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCC---C-----
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCC---C-----
Confidence 21111 111222223456888999999999999999 55566554434443333221111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
.+...+.++.+++.+||+.+|++|||++|++++|+++......
T Consensus 253 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 253 -----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0111235789999999999999999999999999999775543
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=315.09 Aligned_cols=243 Identities=15% Similarity=0.281 Sum_probs=193.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|...++..||||++...... .+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 84 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS------EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTEF 84 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC------HHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEECC
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCC------HHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEeC
Confidence 3889999999999999988889999998654321 356899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++.... ..+++..+.+++.++++||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 85 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 99999999997543 4689999999999999999999998 999999999999999999999999999987642110
Q ss_pred ----c----ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 547 ----V----SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 547 ----~----~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
. ....|+......+++++||||||+++|||+| |+.||...........+...... .. +
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~-------~~------~ 227 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL-------YK------P 227 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC-------CC------C
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcC-------CC------C
Confidence 0 1112222223456888999999999999999 89999765433333222211110 00 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.....++.+++.+||+.+|++||+++++++.|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11236788999999999999999999999999998753
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=315.24 Aligned_cols=259 Identities=13% Similarity=0.204 Sum_probs=195.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++........++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 389999999999999985 5899999998643321 22456789999999999999999999998765445799999
Q ss_pred ecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeEEccccccccc
Q 005734 467 YAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL----TDDYAAKVAEICFTTIA 541 (680)
Q Consensus 467 y~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~ki~DFGla~~~ 541 (680)
|+++|+|.+++.... ...+++..++.|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 999999999997543 23499999999999999999999998 99999999999999 78888999999999876
Q ss_pred CCCCCcc-------cccccCCC--------CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhc-CCC-
Q 005734 542 LPKSKVS-------DDIENSVL--------PPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLN-EPR- 603 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~--------~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~-~~~- 603 (680)
....... ...|+... ...++.++|||||||++|||+||+.||..... ....+....... .+.
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~ 246 (319)
T 4euu_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246 (319)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTT
T ss_pred CCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcc
Confidence 5432211 11122211 35678899999999999999999999963221 112222222221 111
Q ss_pred Ccccc---------cCccc---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 604 NFSCM---------IDPSL---KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 604 ~~~~~---------~d~~l---~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
....+ .++.+ ..........+.+++.+|++.||++|||++|+++...+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 00000 00111 1345677788999999999999999999999999887653
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=321.24 Aligned_cols=252 Identities=17% Similarity=0.340 Sum_probs=187.7
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC---c
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF---N 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---~ 460 (680)
.+.||+|+||.||+|+.. ++..||||++...... ....+.|.+|++++++++||||+++++++.+.... .
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS---QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC---HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc---hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 388999999999999864 3457999998654322 23456799999999999999999999999875421 3
Q ss_pred eEEEEEecCCCChhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 461 RMMVFEYAPNGTVFEHLHI----KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~----~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
.++||||+++|+|.+++.. .....+++..+++|+.++++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence 4899999999999999843 2345799999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 537 FTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 537 la~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
+++......... ...|+......+++++||||||+++|||+| |+.||...........+......
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---- 268 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL---- 268 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC----
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC----
Confidence 998764321111 112222234457888999999999999999 88999765544444433221111
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
..+.....++.+++.+||+.+|++|||+.++++.|+++....++
T Consensus 269 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 269 ---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp ---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 01112236789999999999999999999999999999876554
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=317.45 Aligned_cols=246 Identities=20% Similarity=0.350 Sum_probs=179.9
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|... |..||||++....... .....+.+.+|++++++++||||+++++++.+++ ..++||||
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 87 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDED-ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVMEF 87 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEEC
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCccc-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEEEc
Confidence 489999999999999975 8889999886543221 1223467899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--------CCCeEEccccccc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD--------DYAAKVAEICFTT 539 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--------~~~~ki~DFGla~ 539 (680)
+++|+|.+++.. ..+++..+..++.++++||+|||+....+|+||||||+||+++. ++.+||+|||+++
T Consensus 88 ~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 88 ARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp CTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 999999999853 36899999999999999999999983333999999999999986 6789999999998
Q ss_pred ccCCCCCcc------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 540 IALPKSKVS------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 540 ~~~~~~~~~------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
......... ...|+......+++++||||||++++||+||+.||.......... .........
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~-------- 233 (271)
T 3dtc_A 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY---GVAMNKLAL-------- 233 (271)
T ss_dssp -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH---HHHTSCCCC--------
T ss_pred ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---hhhcCCCCC--------
Confidence 654322111 112232223456888999999999999999999997654322221 111111000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
..+.....++.+++.+||+.+|++|||+.|++++|+++
T Consensus 234 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 -PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 01122336789999999999999999999999999864
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=324.85 Aligned_cols=246 Identities=9% Similarity=0.110 Sum_probs=190.9
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+|+++++++ +||||+++++++...+ ..++||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~ 84 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMVL 84 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEEE
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc-------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEEE
Confidence 38999999999999996 5789999998865432 23588999999999 8999999999999877 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-----eEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA-----AKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-----~ki~DFGla~~ 540 (680)
||+ +|+|.+++... ...+++..++.|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 85 ELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 999 99999999754 34799999999999999999999998 9999999999999998887 99999999987
Q ss_pred cCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 541 ALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 541 ~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
....... ....|+......++.++|||||||++|||+||+.||.+....+..+............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 6432211 0111222334456888999999999999999999998654444433333221110000
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
. ...+ ....+ ++.+++.+||+.+|.+||++++|.+.|+++..
T Consensus 240 ~---~~~~---~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 240 P---IEVL---CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp C---HHHH---TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred C---HHHH---hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 0 0000 01123 89999999999999999999999999998853
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=326.35 Aligned_cols=238 Identities=15% Similarity=0.243 Sum_probs=182.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+. .+|..||||++.... ....++|.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~ 167 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRG-----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEY 167 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeC
Confidence 6899999999999997 478999999987643 233567999999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--cCCCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL--TDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--d~~~~~ki~DFGla~~~~~~~ 545 (680)
+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++......
T Consensus 168 ~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 168 VDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp CTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 99999999986432 3689999999999999999999998 99999999999999 667899999999998765432
Q ss_pred Ccc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 KVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
... ...|+......++.++|||||||++|||+||+.||.+........ .......... +.....
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~i~~~~~~~~---~~~~~~--- 314 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN---NILACRWDLE---DEEFQD--- 314 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHHTCCCSC---SGGGTT---
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHhccCCCC---hhhhcc---
Confidence 211 112333334456788999999999999999999998654333222 2222111111 111111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...++.+++.+|++.||++|||++|+++
T Consensus 315 -~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 -ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2367899999999999999999999987
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=319.79 Aligned_cols=239 Identities=15% Similarity=0.228 Sum_probs=188.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|..+|+|.+.... .....+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e 81 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG------TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFE 81 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCc------ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEEE
Confidence 388999999999999975 68899999886442 23456889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD--DYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 82 ~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 82 FISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 99999999999643 34699999999999999999999998 9999999999999987 789999999999876543
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...|+......+++++|||||||++|||+||+.||...........+ ......... +...
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~~~~~~~~~---~~~~--- 228 (321)
T 1tki_A 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI---MNAEYTFDE---EAFK--- 228 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHTCCCCCH---HHHT---
T ss_pred CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH---HcCCCCCCh---hhhc---
Confidence 2211 11223333345688999999999999999999999865433333222 222111110 0011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||+.|+++.
T Consensus 229 -~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 -EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 123578899999999999999999999974
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-37 Score=316.87 Aligned_cols=246 Identities=22% Similarity=0.407 Sum_probs=183.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||+||+|+..+ .||||++...... ....+.|.+|++++++++||||+++++++... ..++||||
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~e~ 100 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQW 100 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--EEEEEEESCSSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred eeEecCCCCeEEEEEEEcC--ceEEEEEeccCCC---HHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEEEEe
Confidence 4899999999999998753 5999998755422 34456799999999999999999999987543 46899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ...+++..+++|+.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 101 CEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred cCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 9999999999643 35699999999999999999999998 9999999999999999999999999999765421110
Q ss_pred ----------ccccccCCC---CCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-HHHHHHHHhcCCCCcccccCccc
Q 005734 548 ----------SDDIENSVL---PPLADPETNIYSFGILMLEIISGKLPYCEEKELS-IEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 548 ----------~~~~~~~~~---~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
....|+... ...++.++||||||+++|||+||+.||....... +.+.+..... .+.+
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---------~~~~ 247 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL---------SPDL 247 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSC---------CCCT
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhccccc---------Ccch
Confidence 111122221 3456778999999999999999999997643222 2222222111 1112
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
......++.++.+++.+||+.+|++|||+.+++++|+++..
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 22223344789999999999999999999999999998764
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=319.12 Aligned_cols=237 Identities=14% Similarity=0.171 Sum_probs=188.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+++.. +|+.||||++...... .......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv~E~ 86 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII--AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEY 86 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh--hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEEEeC
Confidence 89999999999999975 6899999998643211 1223456889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 87 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 161 (337)
T 1o6l_A 87 ANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161 (337)
T ss_dssp CTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence 9999999999643 3689999999999999999999998 9999999999999999999999999999864322111
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+......++.++|||||||++|||+||+.||.......+.+ ........+ +..
T Consensus 162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~---~i~~~~~~~-----------p~~ 227 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRF-----------PRT 227 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCC-----------CTT
T ss_pred ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHH---HHHcCCCCC-----------CCC
Confidence 1122444445567899999999999999999999997654333322 222221111 112
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
...++.+++.+|++.||++|| +++||++.
T Consensus 228 ~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 236788999999999999999 89998764
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=354.00 Aligned_cols=241 Identities=17% Similarity=0.271 Sum_probs=191.2
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.||+|+||.||+|.+. .++.||||+++..... ....++|.+|++++++++|||||+++++|..+ ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND---PALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC---GGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEE
Confidence 57999999999999753 5678999988654321 23356799999999999999999999999754 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|||++|+|.+++... ..+++..++.|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 449 E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~ 523 (635)
T 4fl3_A 449 EMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523 (635)
T ss_dssp ECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred EccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence 999999999999643 4689999999999999999999998 99999999999999999999999999998765322
Q ss_pred Ccc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 546 KVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 546 ~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
... ...|+......++.++|||||||++|||+| |+.||.+.....+...+......
T Consensus 524 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~------------ 591 (635)
T 4fl3_A 524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM------------ 591 (635)
T ss_dssp -----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC------------
T ss_pred cccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------
Confidence 110 112222223467889999999999999999 99999876544443333321111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
..+..++.++.+++.+||+.||++||++++|+++|+++.
T Consensus 592 -~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 592 -GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 112233478999999999999999999999999999874
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=326.73 Aligned_cols=242 Identities=17% Similarity=0.272 Sum_probs=186.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCE----EEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVE----IAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~----vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||+||+|+.. +|.. ||+|.+...... .....+.+|+.++++++|||||+++++|.+. ..++
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~ 91 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR----QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---SLQL 91 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC----SCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---SEEE
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH----HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---ccEE
Confidence 89999999999999964 5554 666665432211 1224578899999999999999999999743 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++... ...+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999754 34689999999999999999999998 999999999999999999999999999988653
Q ss_pred CCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+......++.++||||||+++|||+| |+.||.+.....+...+....... .
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--~------- 238 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLA--Q------- 238 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCC--C-------
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC--C-------
Confidence 32111 111222222457888999999999999999 999998765444444433221110 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
+..+..++.+++.+||+.||++||+++++++.|+.+..
T Consensus 239 ----~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 239 ----PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ----CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ----CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11112357789999999999999999999999999853
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=316.54 Aligned_cols=242 Identities=14% Similarity=0.262 Sum_probs=191.7
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
..||+|+||.||+|+.. ++..||||++..... ....+.+.+|++++++++||||+++++++.. + ..++||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~ 88 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVM 88 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S--SEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccc----hhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C--CcEEEE
Confidence 48999999999999863 678899999865432 3446679999999999999999999999954 3 479999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ...+++..+.+++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 89 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp ECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999643 34699999999999999999999998 99999999999999999999999999998765322
Q ss_pred Ccc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 546 KVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 546 ~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
... ...|+......++.++||||||+++|||+| |+.||...........+......
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~------------ 232 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM------------ 232 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC------------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC------------
Confidence 111 111222222346788999999999999999 99999765543333333221100
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+.++.+++.+||+.+|++||++.++++.|+++..
T Consensus 233 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 233 -ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp -CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1112234689999999999999999999999999999854
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=314.64 Aligned_cols=242 Identities=14% Similarity=0.203 Sum_probs=179.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhh---------------------HHHHHHHHHHHHHHHHcCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDW---------------------LKSQEMAYRKQVDTLSRINHKN 445 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~---------------------~~~~~~~f~~E~~~l~~l~H~n 445 (680)
.+.||+|+||.||+|+.. +|+.||||++........ .....+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 389999999999999974 688999999865432110 0112356899999999999999
Q ss_pred ccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 005734 446 FVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 446 iv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 525 (680)
|+++++++.+......++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVG 171 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEC
Confidence 9999999987443367999999999999987642 4699999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccccccccCCCCCc--------ccccccCCCCCC---CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHH
Q 005734 526 DDYAAKVAEICFTTIALPKSKV--------SDDIENSVLPPL---ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKW 594 (680)
Q Consensus 526 ~~~~~ki~DFGla~~~~~~~~~--------~~~~~~~~~~~~---~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~ 594 (680)
.++.+||+|||+++........ ....|+...... .+.++|||||||++|||+||+.||.......+...
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~ 251 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK 251 (298)
T ss_dssp TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHH
Confidence 9999999999999876532211 111233322211 36678999999999999999999976542222222
Q ss_pred HHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 595 AADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 595 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+ ........ .. .....++.+++.+||+.||++|||+.|+++
T Consensus 252 ~---~~~~~~~~-----~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 252 I---KSQALEFP-----DQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H---HHCCCCCC-----SS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H---hcccCCCC-----Cc----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2 11111111 00 112257889999999999999999999875
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=315.85 Aligned_cols=249 Identities=10% Similarity=0.104 Sum_probs=191.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|.. .+|+.||||++..... ...+.+|++++.++ +|+|++++++++.+.. ..++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~ 85 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVI 85 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeEEEE
Confidence 38999999999999996 5789999998864331 23578899999999 7999999999998877 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC-----eEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA-----AKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-----~ki~DFGla~~ 540 (680)
||+ +|+|.+++... ...+++..+.+|+.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 86 e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 86 DLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 999 99999999754 34699999999999999999999998 9999999999999987776 99999999987
Q ss_pred cCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 541 ALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 541 ~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
....... ....|+......+++++||||||+++|||+||+.||.....................
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~- 239 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS- 239 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH-
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC-
Confidence 6532211 011123333445688899999999999999999999864332222222211110000
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+.........+.++.+++.+||+.+|++||++++|++.|+++....
T Consensus 240 -----~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 240 -----TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp -----SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 0000001122368899999999999999999999999999997644
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=316.67 Aligned_cols=251 Identities=13% Similarity=0.140 Sum_probs=189.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +++.||||++...... .....+.+.+|++++++++||||+++++++...+ ..++|+|
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 114 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS--DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYVDMR 114 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc--CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEEEEE
Confidence 389999999999999975 7889999998654322 1344577999999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..++.++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 115 LINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred ecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999999643 3689999999999999999999998 999999999999999999999999999877643211
Q ss_pred ---------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 547 ---------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 547 ---------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.....|+......++.++||||||+++|||+||+.||........ ...+.......... .
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~-------~ 258 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM----GAHINQAIPRPSTV-------R 258 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH----HHHHHSCCCCGGGT-------S
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH----HHHhccCCCCcccc-------C
Confidence 112234444455678899999999999999999999976542222 12222111111111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhccCCC
Q 005734 618 QNELEAICEVIKECIKTDLRQRP-TMNDIIVQLRQVINISPE 658 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RP-tm~ev~~~L~~i~~~~~~ 658 (680)
...+.++.+++.+||+.||++|| +++++++.|+++......
T Consensus 259 ~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 259 PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 22235788999999999999999 999999999988665543
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=317.74 Aligned_cols=243 Identities=19% Similarity=0.332 Sum_probs=185.9
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+++.. |+.||||++.... ..+.|.+|++++++++||||+++++++.+... ..++||||
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~ 96 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 96 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECC
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEec
Confidence 389999999999999885 8899999986432 24578999999999999999999999865442 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 173 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 173 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccC
Confidence 9999999999754433489999999999999999999998 9999999999999999999999999998865432211
Q ss_pred cc-----ccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 548 SD-----DIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 548 ~~-----~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.. ..|+......+++++||||||++++||+| |+.||......+....+..... . ..+...+
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~----------~---~~~~~~~ 240 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK----------M---DAPDGCP 240 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC----------C---CCCTTCC
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC----------C---CCcccCC
Confidence 11 12222223456888999999999999999 9999976544444333221110 0 1112233
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 6789999999999999999999999999998653
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=323.09 Aligned_cols=240 Identities=14% Similarity=0.188 Sum_probs=188.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +|+.||||++...... .....+.+.+|++++.+++|||||++++++.+.+ ..++|||
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv~e 95 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV--ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVD 95 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc--cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEe
Confidence 389999999999999975 6889999998643211 1223467889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 96 ~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 96 LLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp CCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999999643 4699999999999999999999998 999999999999999999999999999987653321
Q ss_pred cc-------cccccCCC---CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 VS-------DDIENSVL---PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~~-------~~~~~~~~---~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...|+... ...++.++|||||||++|||+||+.||......................
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~----------- 239 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY----------- 239 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCC-----------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCC-----------
Confidence 11 11233322 2346889999999999999999999997544344444433332221111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPT-MNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPt-m~ev~~ 647 (680)
+.....++.+++.+||+.||++||+ +++|.+
T Consensus 240 p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 240 PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1122367899999999999999998 666653
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=325.07 Aligned_cols=243 Identities=14% Similarity=0.283 Sum_probs=185.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEE----EEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEI----AVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~v----aVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||.||+|... +++.+ ++|.+..... ....+.+.+|++++++++||||++++++|..+. .++
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---~~~ 93 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS----PKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQL 93 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS----CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---EEE
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---ceE
Confidence 89999999999999964 55555 5555432221 223567899999999999999999999998754 689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++.... ..+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999997543 4699999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+......++.++|||||||++|||+| |+.||.......+...+......+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 239 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---------- 239 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC----------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC----------
Confidence 21111 111222223457889999999999999999 999998765555544443321110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+.....++.+++.+||+.||++||++.|+++.|+++...
T Consensus 240 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 240 ---QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ---CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1112235788999999999999999999999999998743
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=318.06 Aligned_cols=243 Identities=16% Similarity=0.216 Sum_probs=188.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||++... +|..||||++......... ......+.+|++++++++|||||++++++.+.. ..++||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 93 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEE
Confidence 489999999999999975 6899999998765422110 112457899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~~ 541 (680)
||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||+++++ .+||+|||+++..
T Consensus 94 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 94 ELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp ECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999643 4699999999999999999999998 999999999999999887 7999999999876
Q ss_pred CCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...|+......++.++|||||||++|||+||+.||.+.........+.. ....... ....
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~~~~~---~~~~ 242 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA---VNYEFED---EYFS 242 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH---TCCCCCH---HHHT
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh---cCCCcCc---cccc
Confidence 5322111 1123333345678899999999999999999999976543333222221 1111110 0001
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+|++.||++|||+.|+++
T Consensus 243 ----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 243 ----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 12257889999999999999999999986
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=318.34 Aligned_cols=237 Identities=13% Similarity=0.226 Sum_probs=181.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---------
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP--------- 458 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--------- 458 (680)
+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++|||||+++++|.+...
T Consensus 12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3qd2_B 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDE 87 (332)
T ss_dssp EEEECC-CSEEEEEEETTTCCEEEEEEEECCST----TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC
T ss_pred eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhh
Confidence 89999999999999986 899999999875432 2245679999999999999999999999865432
Q ss_pred ----------------------------------------------CceEEEEEecCCCChhhhhccCC-CCCCCHHHHH
Q 005734 459 ----------------------------------------------FNRMMVFEYAPNGTVFEHLHIKE-MDHLDWNARM 491 (680)
Q Consensus 459 ----------------------------------------------~~~~lV~ey~~~GsL~~~l~~~~-~~~l~~~~rl 491 (680)
...++||||+++|+|.+++.... ....++..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 167 (332)
T 3qd2_B 88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL 167 (332)
T ss_dssp --------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHH
T ss_pred hhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHH
Confidence 02689999999999999997543 2456788899
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc--------------------cccc
Q 005734 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV--------------------SDDI 551 (680)
Q Consensus 492 ~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~--------------------~~~~ 551 (680)
+|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........ ....
T Consensus 168 ~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 9999999999999998 9999999999999999999999999999877543110 0112
Q ss_pred ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHc
Q 005734 552 ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631 (680)
Q Consensus 552 ~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C 631 (680)
|+......+++++|||||||++|||+||..|+... .......... ... ........++.+++.+|
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~~~~~~~~~~--~~~--------~~~~~~~~~~~~li~~~ 309 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----VRIITDVRNL--KFP--------LLFTQKYPQEHMMVQDM 309 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----HHHHHHHHTT--CCC--------HHHHHHCHHHHHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----HHHHHHhhcc--CCC--------cccccCChhHHHHHHHH
Confidence 23233346788999999999999999998775321 1111111111 000 11123335678999999
Q ss_pred cccCCCCCCCHHHHHH
Q 005734 632 IKTDLRQRPTMNDIIV 647 (680)
Q Consensus 632 ~~~~P~~RPtm~ev~~ 647 (680)
|+.||++|||++|+++
T Consensus 310 l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 310 LSPSPTERPEATDIIE 325 (332)
T ss_dssp HCSSGGGSCCHHHHHH
T ss_pred ccCCCCcCCCHHHHhh
Confidence 9999999999999986
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-37 Score=325.35 Aligned_cols=245 Identities=13% Similarity=0.198 Sum_probs=186.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|... +|+.||||++.............+.+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e 106 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLYMVFE 106 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEe
Confidence 489999999999999974 7899999998643211110112457899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEccccccccc
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTIA 541 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla~~~ 541 (680)
|+++|+|.+.+... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..
T Consensus 107 ~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 99999999888543 234689999999999999999999998 9999999999999986654 999999999876
Q ss_pred CCCCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 542 LPKSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 542 ~~~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
....... ...|+......++.++|||||||++|||+||+.||.+... .+.. .......... .+..
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~---~i~~~~~~~~---~~~~ 256 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFE---GIIKGKYKMN---PRQW 256 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHH---HHHHTCCCCC---HHHH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHH---HHHcCCCCCC---cccc
Confidence 5432211 1123333345678999999999999999999999976432 2222 2221111110 0001
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.. ...++.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 257 SH----ISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp TT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 23578899999999999999999999863
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=317.09 Aligned_cols=241 Identities=17% Similarity=0.268 Sum_probs=187.9
Q ss_pred ccCCCCCCeEEEEEe---CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSGCTIYKGTL---SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~---~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.||+|+||.||+|.. .++..||||++..... .....++|.+|++++++++||||+++++++.. + ..++|||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e 97 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SWMLVME 97 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SEEEEEE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--CcEEEEE
Confidence 899999999999964 3468899999865431 12345679999999999999999999999943 3 5689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..++.++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 98 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 98 MAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp CCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred eCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 99999999999753 3689999999999999999999998 999999999999999999999999999987653321
Q ss_pred cc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 VS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
.. ...|+......+++++||||||+++|||+| |+.||.......+...+..... .
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~----~--------- 239 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER----M--------- 239 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC----C---------
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC----C---------
Confidence 11 111222112345678999999999999999 9999986554333333322110 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+.....++.+++.+||+.||++||++.+|++.|+++..
T Consensus 240 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 240 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1112233678999999999999999999999999999854
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=314.91 Aligned_cols=237 Identities=18% Similarity=0.224 Sum_probs=188.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+++.. +|+.||||++....... ....+.+.+|+.++++++|||||++++++.+.+ ..++||||
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~e~ 87 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMDY 87 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEEEeC
Confidence 89999999999999975 78999999986432111 123456889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 88 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~ 162 (318)
T 1fot_A 88 IEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 162 (318)
T ss_dssp CCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCcccc
Confidence 9999999999753 3689999999999999999999998 9999999999999999999999999999876543222
Q ss_pred ccc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 548 SDD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 548 ~~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
... .|+......++.++|||||||++|||+||+.||........ ..........+. .....
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~p-----------~~~~~ 228 (318)
T 1fot_A 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT---YEKILNAELRFP-----------PFFNE 228 (318)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHHCCCCCC-----------TTSCH
T ss_pred ccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCCCCC-----------CCCCH
Confidence 222 23333345678899999999999999999999976543222 222222211111 11225
Q ss_pred HHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 623 AICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
++.+++.+|++.||++|| +++|+++.
T Consensus 229 ~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 229 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 788999999999999999 88888753
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=315.37 Aligned_cols=253 Identities=16% Similarity=0.232 Sum_probs=191.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC--CCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD--EPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~lV 464 (680)
.+.||+|+||.||+++. .+|+.||||++.... ....+.+.+|++++++++||||+++++++... .....++|
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 38999999999999997 578999999886543 23456789999999999999999999999732 11256899
Q ss_pred EEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 465 FEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 9999999999999642 345799999999999999999999998 99999999999999999999999999987653
Q ss_pred CCC-----------------CcccccccCCCCC---CCCCCCCeeehhHHHHHHHhCCCCCCccc--cccHHHHHHHHhc
Q 005734 543 PKS-----------------KVSDDIENSVLPP---LADPETNIYSFGILMLEIISGKLPYCEEK--ELSIEKWAADYLN 600 (680)
Q Consensus 543 ~~~-----------------~~~~~~~~~~~~~---~~s~~sDVySfGvvllElltG~~p~~~~~--~~~~~~~~~~~~~ 600 (680)
... ......|+..... .+++++||||||+++|||+||+.||.... .............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 265 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCC
Confidence 210 1112223332221 25789999999999999999999996421 1122222211110
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCC
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAV 661 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~ 661 (680)
.. .......++.+++.+||+.||++||+++++++.|+.+....+.+..
T Consensus 266 ----~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~~ 313 (317)
T 2buj_A 266 ----IP---------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHT 313 (317)
T ss_dssp ----CC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC---
T ss_pred ----CC---------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCCC
Confidence 00 0112236789999999999999999999999999999877666544
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=321.41 Aligned_cols=243 Identities=16% Similarity=0.223 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +|+.||||++......... ......+.+|++++.+++|||||++++++.+.. ..++||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv~ 94 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--DVVLIL 94 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--EEEEEE
Confidence 489999999999999975 6899999998765432110 112457899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~~ 541 (680)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||+++++ .+||+|||+++..
T Consensus 95 e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 95 ELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp ECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 999999999999643 4699999999999999999999998 999999999999998776 7999999999876
Q ss_pred CCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...|+......++.++|||||||++|||++|+.||.+......... .......+. +..
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~---i~~~~~~~~----~~~- 241 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN---ITAVSYDFD----EEF- 241 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH---HHTTCCCCC----HHH-
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCCCC----chh-
Confidence 5432111 1123333345678899999999999999999999986543333222 222211111 100
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......+.+++.+|+..||++|||+.|+++
T Consensus 242 --~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 242 --FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0112357889999999999999999999985
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=317.94 Aligned_cols=238 Identities=13% Similarity=0.212 Sum_probs=181.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e~ 86 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEY 86 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccc----chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEEc
Confidence 89999999999999975 7899999998654321 23456889999999999999999999999877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999999643 3699999999999999999999998 999999999999999999999999999986542111
Q ss_pred ----cc-----cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 ----VS-----DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ----~~-----~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...|+..... +.+.++|||||||++|||+||+.||........... .......... .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~--~~~~~~~~~~-----~---- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DWKEKKTYLN-----P---- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHH--HHHTTCTTST-----T----
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHH--HHhcccccCC-----c----
Confidence 00 1112222122 236789999999999999999999976443222111 1111111000 0
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......++.+++.+|++.||++|||++|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11223578899999999999999999999864
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=313.06 Aligned_cols=244 Identities=15% Similarity=0.241 Sum_probs=190.1
Q ss_pred ccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+..+ +..||||.+..... ....+.|.+|++++++++||||+++++++.++ ..++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 89 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT----LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---PTWI 89 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC----HHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS---SCEE
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC----chHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CCEE
Confidence 3899999999999998642 34599998865432 23456799999999999999999999998754 3589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 99999999999999643 34689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 KSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 ~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
..... ...|+......+++++||||||+++|||+| |+.||......+....+......+ .
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~--~-------- 235 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP--K-------- 235 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC--C--------
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC--C--------
Confidence 22111 112222223456888999999999999999 999997655445444433321110 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
+......+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 236 ---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 236 ---PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 111236788999999999999999999999999998653
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=324.31 Aligned_cols=254 Identities=15% Similarity=0.200 Sum_probs=190.6
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+++. .++..||||++.... ....+.+.+|++++++++||||+++++++...+....+
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 38999999999999984 468899999986543 33456799999999999999999999999754433678
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..++.|+.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999996432 3589999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-----------HHHHHHHHhc
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS-----------IEKWAADYLN 600 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-----------~~~~~~~~~~ 600 (680)
...... ...|+......+++++||||||++++||+||+.||....... ....+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 322111 111222222345778999999999999999999986432110 0111111111
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCC
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~ 659 (680)
.... ...+.....++.+++.+||+.||++|||++|++++|+.+.......
T Consensus 259 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 259 EGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 1110 0112233468899999999999999999999999999997655443
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=320.32 Aligned_cols=251 Identities=12% Similarity=0.173 Sum_probs=186.9
Q ss_pred Hhhhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 383 ACEDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 383 ~~~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
..+.|. +.||+|+||.||+|.. .++..||||++.............+.+.+|++++++++|||||++++++.+.+
T Consensus 24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-- 101 (345)
T 3hko_A 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ-- 101 (345)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC--
Confidence 334454 8999999999999997 47889999998654322222344568999999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccC--------------------------------------CCCCCCHHHHHHHHHHHHHHH
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK--------------------------------------EMDHLDWNARMRIIMGTAYCL 501 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~--------------------------------------~~~~l~~~~rl~ia~~ia~gL 501 (680)
..++||||+++|+|.+++... ....+++..+..|+.|+++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 789999999999999998521 011235677889999999999
Q ss_pred HHHhcCCCCCeeecCCCCCCeeecCCC--CeEEcccccccccCCCCC-------c-----ccccccCCC--CCCCCCCCC
Q 005734 502 QYMHHELNPPVAHSNLSSHCIYLTDDY--AAKVAEICFTTIALPKSK-------V-----SDDIENSVL--PPLADPETN 565 (680)
Q Consensus 502 ~yLH~~~~~~ivHrDlKp~NILld~~~--~~ki~DFGla~~~~~~~~-------~-----~~~~~~~~~--~~~~s~~sD 565 (680)
+|||+. +|+||||||+||+++.++ .+||+|||+++....... . ....|+... ...+++++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999998 999999999999998766 899999999986532110 0 111233222 246788999
Q ss_pred eeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 005734 566 IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 566 VySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev 645 (680)
|||||+++|||+||+.||.+....+.. ........... .+... ....++.+++.+|++.+|++||++.|+
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~---~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDADTI---SQVLNKKLCFE---NPNYN----VLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHCCCCTT---SGGGG----GSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHHHH---HHHHhcccccC---Ccccc----cCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 999999999999999999765433222 22222211111 11111 123678899999999999999999999
Q ss_pred HHH
Q 005734 646 IVQ 648 (680)
Q Consensus 646 ~~~ 648 (680)
++.
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 873
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=321.18 Aligned_cols=250 Identities=15% Similarity=0.225 Sum_probs=192.2
Q ss_pred ccccCCCCCCeEEEEEeC-----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||+||++.+. +|+.||||++..... ....+.|.+|++++++++||||+++++++.+.+....+
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG----PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC----hHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488999999999998753 688999999865432 33456799999999999999999999999875433678
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... .+++..++.++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 112 lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999999643 489999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc-----------HHHHHHHHhc
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS-----------IEKWAADYLN 600 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~-----------~~~~~~~~~~ 600 (680)
...... ...|+......++.++||||||+++|||+||+.||....... ....+.....
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 332111 111222222345678999999999999999999986432100 0001111111
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.... ...+.....++.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 266 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 266 RGER---------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cccC---------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 1110 0112233468999999999999999999999999999986544
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=319.99 Aligned_cols=241 Identities=13% Similarity=0.218 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|..||||++...... ......+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~e 108 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFD 108 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEe
Confidence 389999999999999975 6899999998754322 234567899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 109 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 109 LVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred cCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 99999999998643 4689999999999999999999998 99999999999999865 4599999999987653
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
..... ...|+......++.++|||||||++|||+||+.||.+.....+...+.. ...... .+.+
T Consensus 184 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~---~~~~~~---~~~~--- 254 (362)
T 2bdw_A 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA---GAYDYP---SPEW--- 254 (362)
T ss_dssp CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCCC---TTGG---
T ss_pred CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh---CCCCCC---cccc---
Confidence 32211 1123333344678899999999999999999999976543333333222 111111 0111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++||++.|+++.
T Consensus 255 -~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 -DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1223678899999999999999999999864
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=313.53 Aligned_cols=249 Identities=16% Similarity=0.228 Sum_probs=188.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
+.||+|+||+||+|+..+|+.||||++...... ......+.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 82 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHL 82 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECC
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccc---cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEEEec
Confidence 789999999999999988999999998654321 122356889999999999999999999999877 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC--
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK-- 546 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~-- 546 (680)
++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 83 DQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp SE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred CC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 75 999988643 34689999999999999999999998 999999999999999999999999999987542211
Q ss_pred ------cccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccc-----ccCcc
Q 005734 547 ------VSDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSC-----MIDPS 612 (680)
Q Consensus 547 ------~~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~d~~ 612 (680)
.....|+... ...++.++|||||||++|||+||+.||.+....+....+......+.. ... ..++.
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence 1112233222 234788999999999999999999999865543333333332222110 000 01111
Q ss_pred c--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 613 L--------KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 613 l--------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. .........++.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1 0111223467889999999999999999999975
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-36 Score=326.10 Aligned_cols=241 Identities=12% Similarity=0.191 Sum_probs=188.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+|+.+|+|++...... ......+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv~E 90 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYLIFD 90 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH---HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEEEEE
Confidence 38999999999999986 47899999998765432 334567999999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+.+... ..+++.....++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+++....
T Consensus 91 ~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 91 LVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred eCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999999999754 3699999999999999999999998 999999999999998 467899999999987653
Q ss_pred CCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
..... ...|+......+++++||||+||++|||++|+.||.+.....+...+.. ...... .+.+.
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~---~~~~~~---~~~~~- 238 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKA---GAYDFP---SPEWD- 238 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---TCCCCC---TTTTT-
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh---CCCCCC---ccccc-
Confidence 32211 1123333344678899999999999999999999976554333333322 111111 11111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||+.|+++.
T Consensus 239 ---~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 239 ---TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 123678899999999999999999999874
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=317.78 Aligned_cols=256 Identities=16% Similarity=0.186 Sum_probs=188.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecCCCC---c
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDDEPF---N 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~---~ 460 (680)
.+.||+|+||+||+|+. .+|+.||||++...............+.+|+++++++ +||||++++++|...... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 38999999999999996 5789999999875442211111123456677776666 599999999999865421 3
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++||||+. |+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 169 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARI 169 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCSCTTT
T ss_pred EEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCccccc
Confidence 689999996 6999999866656699999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc--ccccC-
Q 005734 541 ALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF--SCMID- 610 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~d- 610 (680)
........ ...|+......++.++|||||||++|||+||+.||......+....+......+... .....
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (308)
T 3g33_A 170 YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 249 (308)
T ss_dssp STTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSS
T ss_pred cCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhc
Confidence 65332211 112333334567899999999999999999999998765444444443333221110 00000
Q ss_pred --cccC--------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 --PSLK--------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 --~~l~--------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+. ....+...++.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 250 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 001123467889999999999999999999986
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-36 Score=315.43 Aligned_cols=252 Identities=17% Similarity=0.290 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC--CCCcccceeeEEecCCC--CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI--NHKNFVNLIGYCEDDEP--FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~~~--~~~~l 463 (680)
.+.||+|+||.||+|+.. |+.||||++.... ...+..|.+++... +||||+++++++..... ...++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 399999999999999986 8899999985432 23345566666555 89999999999987631 26799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-----NPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~-----~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
||||+++|+|.+++... .+++..+++++.+++.||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 113 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 99999999999999643 5899999999999999999999762 458999999999999999999999999999
Q ss_pred cccCCCCCc------------ccccccCCCCCCCCCC------CCeeehhHHHHHHHhC----------CCCCCcccc-c
Q 005734 539 TIALPKSKV------------SDDIENSVLPPLADPE------TNIYSFGILMLEIISG----------KLPYCEEKE-L 589 (680)
Q Consensus 539 ~~~~~~~~~------------~~~~~~~~~~~~~s~~------sDVySfGvvllElltG----------~~p~~~~~~-~ 589 (680)
+........ ....|+.......+.+ +|||||||++|||+|| +.||..... .
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 776432211 0111222222233333 8999999999999999 666653211 1
Q ss_pred cHHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 590 SIEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
............ ... .+.... ...++..++.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 270 ~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 270 PSYEDMREIVCI-KKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CCHHHHHHHHTT-SCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CchhhhHHHHhh-hcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 111111221111 111 111111 12367788999999999999999999999999999987654
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=320.79 Aligned_cols=241 Identities=16% Similarity=0.227 Sum_probs=187.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||++....... ....++|.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~ 135 (348)
T 1u5q_A 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEY 135 (348)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEccCCCEEEEEEEEccCCeEEEEEEEccccccc--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEEEec
Confidence 7899999999999996 578999999987543222 334567999999999999999999999999877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
++ |+|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 136 ~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~ 210 (348)
T 1u5q_A 136 CL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF 210 (348)
T ss_dssp CS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCC
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcc
Confidence 97 6888888533 24699999999999999999999998 9999999999999999999999999999876533222
Q ss_pred cc----ccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 548 SD----DIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 548 ~~----~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.+ ..|+.. ....++.++|||||||++|||+||+.||........ +......... ... ....
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~---~~~~~~~~~~--~~~-------~~~~ 278 (348)
T 1u5q_A 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHIAQNESP--ALQ-------SGHW 278 (348)
T ss_dssp CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCC--CCC-------CTTS
T ss_pred cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhcCCC--CCC-------CCCC
Confidence 11 123322 234678899999999999999999999976443222 2222221110 000 1112
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
...+.+++.+||+.+|++|||++++++..-
T Consensus 279 ~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 279 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 357889999999999999999999987543
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=312.17 Aligned_cols=254 Identities=15% Similarity=0.247 Sum_probs=188.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+|+.||||++....... .....++.+|++++++++||||+++++++...+ ..++|||
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 112 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVLE 112 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEEEEe
Confidence 38999999999999997 578999999986533221 344567999999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ....+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 99999999998642 345689999999999999999999998 9999999999999999999999999998875432
Q ss_pred CCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 545 SKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 545 ~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... ....|+......++.++||||||+++|||+||+.||.+.. .............. .....
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~--~~~~~------- 259 (310)
T 2wqm_A 190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCKKIEQCD--YPPLP------- 259 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC----CCHHHHHHHHHTTC--SCCCC-------
T ss_pred CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc-hhHHHHHHHhhccc--CCCCc-------
Confidence 111 1122333334567888999999999999999999997543 22333332222211 11000
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
......++.+++.+||+.||++|||+.+|++.|+++.....+
T Consensus 260 ~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 012236788999999999999999999999999999765433
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-37 Score=323.97 Aligned_cols=245 Identities=19% Similarity=0.273 Sum_probs=190.7
Q ss_pred ccccCCCCCCeEEEEEeC-C-----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTLS-S-----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~-----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 460 (680)
.+.||+|+||.||+|... + +..||||.+..... ....+.+.+|++++.++ +||||++++++|.+.+ .
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~ 124 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH----ADEKEALMSELKIMSHLGQHENIVNLLGACTHGG--P 124 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC----hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC--c
Confidence 489999999999999964 2 24799998864432 23456799999999999 8999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 005734 461 RMMVFEYAPNGTVFEHLHIKE------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 528 (680)
.++||||+++|+|.+++.... ...+++..++.++.+++.||+|||+. +|+||||||+|||++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 799999999999999996431 34689999999999999999999998 999999999999999999
Q ss_pred CeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcccccc-HHHHHH
Q 005734 529 AAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELS-IEKWAA 596 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~-~~~~~~ 596 (680)
.+||+|||+++......... ...|+......++.++||||||+++|||+| |+.||.+..... ....+.
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 281 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh
Confidence 99999999998654322110 112222223457889999999999999999 999997643222 222222
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
...... .+...+.++.+++.+||+.||++|||+.||++.|+++..
T Consensus 282 ~~~~~~-------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 282 DGYQMA-------------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HTCCCC-------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCC-------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 211110 011123678899999999999999999999999998754
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=326.29 Aligned_cols=253 Identities=15% Similarity=0.210 Sum_probs=188.5
Q ss_pred ccccCCC--CCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQ--SGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G--~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.+.||+| +||+||+|+.. +|+.||||++...... ....+.+.+|++++++++|||||++++++.+++ ..++|
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 104 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS---NEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVV 104 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEE
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC---hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEEE
Confidence 3899999 99999999985 7999999999754322 345567889999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
||||++|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+......
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 9999999999999876556799999999999999999999998 9999999999999999999999999988654311
Q ss_pred CC---------------cccccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHH-HHHHhcCC----
Q 005734 545 SK---------------VSDDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKW-AADYLNEP---- 602 (680)
Q Consensus 545 ~~---------------~~~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~-~~~~~~~~---- 602 (680)
.. .....|+.... ..++.++|||||||++|||+||+.||.+......... ........
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 10 00122332222 4578899999999999999999999976443222111 11000000
Q ss_pred ----CCc-------------ccccC---c-------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 ----RNF-------------SCMID---P-------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 ----~~~-------------~~~~d---~-------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... ...+. + ...........++.+|+.+||+.||++|||++|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 00000 0 0000112234678999999999999999999999865
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=317.62 Aligned_cols=255 Identities=16% Similarity=0.248 Sum_probs=188.3
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC--ceEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF--NRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~--~~~lV 464 (680)
.+.||+|+||.||+++. .+|+.||||++....... ......|.+|++++.+++|||||++++++...... ..++|
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv 94 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 94 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS--HHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC--HHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEE
Confidence 38999999999999996 578999999987543222 34456799999999999999999999998765421 23899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.++++.. ..+++..+++++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 95 MEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp EECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 9999999999999643 3689999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 545 SKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 545 ~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
... ....|+......++.++||||||+++|||+||+.||........ ...............
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~---- 242 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV---AYQHVREDPIPPSAR---- 242 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHCCCCCHHHH----
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHhcCCCCCcccc----
Confidence 111 11123333344678889999999999999999999976543222 222222211111000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCH-HHHHHHHHHhhccCCCC
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTM-NDIIVQLRQVINISPEQ 659 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm-~ev~~~L~~i~~~~~~~ 659 (680)
......++.+++.+||+.||++||++ +++...+..+....+..
T Consensus 243 ---~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~ 286 (311)
T 3ork_A 243 ---HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286 (311)
T ss_dssp ---STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCS
T ss_pred ---cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCC
Confidence 01123678899999999999999964 45556676665544433
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-36 Score=321.41 Aligned_cols=240 Identities=15% Similarity=0.223 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++|||||++++++.+.. ..++|||
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~E 128 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLILE 128 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccc-----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEEEEE
Confidence 389999999999999975 78899999886543 223457899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD--DYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 129 ~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 129 FLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp CCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred cCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 99999999999643 34689999999999999999999998 9999999999999974 578999999999876543
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...|+......++.++|||||||++|||+||+.||.+.........+.. ..... ++. ..
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~---~~~~~----~~~---~~ 274 (387)
T 1kob_A 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR---CDWEF----DED---AF 274 (387)
T ss_dssp SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH---CCCCC----CSS---TT
T ss_pred cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCC----Ccc---cc
Confidence 2211 1223434445678889999999999999999999986543333322222 11111 111 01
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1223678899999999999999999999864
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=318.78 Aligned_cols=241 Identities=16% Similarity=0.287 Sum_probs=184.8
Q ss_pred ccccCCCCCCeEEEEEeC-CC-------CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SG-------VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g-------~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
.+.||+|+||+||+|+.. ++ ..||+|++.... ....+.|.+|++++++++||||+++++++.+++
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 85 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD-- 85 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT--
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC--
Confidence 489999999999999864 23 469999885433 223467999999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--------eE
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA--------AK 531 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--------~k 531 (680)
..++||||+++|+|.+++.... ..+++..++.|+.|++.||+|||+. +|+||||||+|||++.++. +|
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 5699999999999999997543 3489999999999999999999998 9999999999999998887 99
Q ss_pred EcccccccccCCCCCc----ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCC-CCccccccHHHHHHHHhcCCCCc
Q 005734 532 VAEICFTTIALPKSKV----SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLP-YCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 532 i~DFGla~~~~~~~~~----~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p-~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
|+|||+++........ ....|+.... ..+++++||||||+++|||+||..| +............. .....
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~----~~~~~ 237 (289)
T 4fvq_A 162 LSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE----DRHQL 237 (289)
T ss_dssp ECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH----TTCCC
T ss_pred eccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh----ccCCC
Confidence 9999998765432111 1122332222 4578899999999999999996554 44332222222111 11111
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.... ..++.+++.+||+.||++|||++|+++.|+++..
T Consensus 238 ~~~~-----------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 238 PAPK-----------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp CCCS-----------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CCCC-----------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 1111 1357899999999999999999999999999865
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-36 Score=309.49 Aligned_cols=237 Identities=21% Similarity=0.318 Sum_probs=186.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... ++..||||++....... ......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 90 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEY 90 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--HTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccch--hhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEEEec
Confidence 89999999999999875 67789999886432111 222457899999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 91 ~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 165 (279)
T 3fdn_A 91 APLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165 (279)
T ss_dssp CTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCccccc
Confidence 9999999999643 3589999999999999999999998 999999999999999999999999999866542211
Q ss_pred -----cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHH
Q 005734 547 -----VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621 (680)
Q Consensus 547 -----~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 621 (680)
.....|+.......+.++||||||+++|||++|+.||...........+.. ..... +....
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~-----------~~~~~ 231 (279)
T 3fdn_A 166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR---VEFTF-----------PDFVT 231 (279)
T ss_dssp --CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH---TCCCC-----------CTTSC
T ss_pred ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh---CCCCC-----------CCcCC
Confidence 111223333445678899999999999999999999986543333222222 11111 11122
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 622 EAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 622 ~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.+++.+|++.||++|||++|+++.
T Consensus 232 ~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 232 EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 578899999999999999999999975
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-37 Score=321.45 Aligned_cols=245 Identities=14% Similarity=0.287 Sum_probs=191.9
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+.. ++..||||++..... ......|.+|++++++++||||+++++++.+.+ ..
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~ 103 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PT 103 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC----HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC----HHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--cc
Confidence 489999999999999864 367899998864332 234567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKE--------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~--------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~ 533 (680)
++||||+++|+|.+++.... ...+++..+++++.+++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence 99999999999999996421 24679999999999999999999998 99999999999999999999999
Q ss_pred ccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++......... ...|+......++.++||||||+++|||+| |+.||...........+. ..
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~- 256 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM---EG- 256 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH---TT-
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH---cC-
Confidence 999998654221111 112222223457888999999999999999 899997654333322221 11
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
. . ...+...+..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 257 ~-~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 257 G-L--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp C-C--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred C-c--------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1 0 01112233678999999999999999999999999998754
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=317.03 Aligned_cols=238 Identities=18% Similarity=0.263 Sum_probs=178.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||+||+|+.. +|+.||||++... ....+.+|++++.+++ |||||++++++.+.. ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e 86 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVME 86 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEE
Confidence 68999999999999985 6899999998543 2346778999999997 999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++.++ .+||+|||+++....
T Consensus 87 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 87 LLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred ccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 99999999999754 4699999999999999999999998 999999999999997665 899999999987643
Q ss_pred CCCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc----ccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE----LSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
.... ....|+......+++++|||||||++|||+||+.||..... ....+............. .+
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~ 238 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE---GE 238 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC---SH
T ss_pred CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC---cc
Confidence 2211 11224444445568889999999999999999999975332 122233333222211110 00
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. ......++.+++.+|++.||++|||++|+++.
T Consensus 239 ~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 A----WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp H----HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred c----ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0 01223678999999999999999999998753
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=318.08 Aligned_cols=237 Identities=16% Similarity=0.209 Sum_probs=188.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+++.. +|+.||||++...... .....+.+.+|++++.+++||||+++++++.+.+ ..++||||
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 122 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV--KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEY 122 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc--cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEEcC
Confidence 89999999999999975 7899999998643211 1123457889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 123 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~ 197 (350)
T 1rdq_E 123 VAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 197 (350)
T ss_dssp CTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCccc
Confidence 9999999999743 3589999999999999999999998 9999999999999999999999999999876543322
Q ss_pred ccc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 548 SDD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 548 ~~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
... .|+......++.++|||||||++|||+||+.||.......+.+ ........+ +.....
T Consensus 198 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~---~i~~~~~~~-----------p~~~~~ 263 (350)
T 1rdq_E 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE---KIVSGKVRF-----------PSHFSS 263 (350)
T ss_dssp CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCC-----------CTTCCH
T ss_pred ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHH---HHHcCCCCC-----------CCCCCH
Confidence 212 2333334567889999999999999999999998654333322 222221111 112236
Q ss_pred HHHHHHHHccccCCCCCCC-----HHHHHHH
Q 005734 623 AICEVIKECIKTDLRQRPT-----MNDIIVQ 648 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RPt-----m~ev~~~ 648 (680)
++.+++.+|++.||++||+ ++||.+.
T Consensus 264 ~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 7889999999999999998 7887753
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=319.21 Aligned_cols=245 Identities=18% Similarity=0.277 Sum_probs=188.1
Q ss_pred ccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+. .++..||||++..... .....+|.+|+.++++++||||+++++++.+.. ..
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 108 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS----EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--PR 108 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc----hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--Cc
Confidence 48999999999999984 3577899999864322 234567999999999999999999999999877 56
Q ss_pred EEEEEecCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEM-----DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVA 533 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~-----~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~ 533 (680)
++||||+++|+|.+++..... ..+++..+++++.+++.||+|||+. +|+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999975432 4599999999999999999999998 9999999999999984 4569999
Q ss_pred ccccccccCCCCCc----------ccccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCC
Q 005734 534 EICFTTIALPKSKV----------SDDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 534 DFGla~~~~~~~~~----------~~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
|||+++........ ....|+......++.++||||||+++|||+| |+.||...........+......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~- 264 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM- 264 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC-
Confidence 99999765322111 1112232223457889999999999999999 99999765433333333221110
Q ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 603 RNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 603 ~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+......+.+++.+||+.||++||++.+|++.|+.+..
T Consensus 265 ------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 265 ------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 0111223678899999999999999999999999998864
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=315.67 Aligned_cols=249 Identities=13% Similarity=0.251 Sum_probs=186.6
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+|++ .+++.||||++..... ......+.+|++++++++||||+++++++...+....+
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc----chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 38999999999999984 4789999999865431 12345789999999999999999999999876433579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..++.++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999996433 4699999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc-----------cccHHHHHHHHhc
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK-----------ELSIEKWAADYLN 600 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~-----------~~~~~~~~~~~~~ 600 (680)
...... ...|+......++.++||||||+++|||+||+.|+.... .......+.....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 332110 111221222345677999999999999999999864221 0011111111111
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
..... ..+.....++.+++.+||+.||++|||+++++++|+++.
T Consensus 258 ~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGKRL---------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCC---------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11100 112233468999999999999999999999999999875
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=315.81 Aligned_cols=249 Identities=14% Similarity=0.236 Sum_probs=180.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... +|+.||||++...... .....+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 84 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE----GTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLVFEF 84 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTT----CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEEEEC
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeeccccc----ccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEEEEe
Confidence 78999999999999974 6899999998754321 12346889999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 468 APNGTVFEHLHIK----EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 468 ~~~GsL~~~l~~~----~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
++ |+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 97 6999998643 224689999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCc--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC-c-ccc----
Q 005734 544 KSKV--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN-F-SCM---- 608 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~---- 608 (680)
.... ....|+.... ..++.++|||||||++|||+||+.||.+.........+......+.. . ...
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (317)
T 2pmi_A 161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240 (317)
T ss_dssp CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhh
Confidence 2111 1112332222 35788999999999999999999999876544444444333222110 0 000
Q ss_pred -cCcccC-------------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 609 -IDPSLK-------------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 609 -~d~~l~-------------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+.+. ........++.+++.+|++.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000 001122357899999999999999999999986
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=312.30 Aligned_cols=246 Identities=16% Similarity=0.175 Sum_probs=187.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+++.. +|+.||||++...... ....+.+.+|++++++++||||+++++++.+......++||||
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 88 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEEC
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeC
Confidence 89999999999999975 7899999998754322 3345679999999999999999999998865332267999999
Q ss_pred cCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 468 APNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHEL--NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 468 ~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~--~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
+++|+|.+++... ....+++..+++|+.+++.||+|||+.. ..+|+||||||+||++++++.+||+|||+++....
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp CTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 9999999999643 2346999999999999999999999981 01299999999999999999999999999987653
Q ss_pred CCCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.... ....|+......++.++||||||+++|||+||+.||.......+...+..... . .
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~-----~--------~ 235 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF-----R--------R 235 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-----C--------C
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccc-----c--------c
Confidence 3211 11223333344568889999999999999999999986543333333222111 0 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
.+.....++.+++.+||+.+|++||+++||++.+.
T Consensus 236 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 11122367899999999999999999999997554
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=321.39 Aligned_cols=237 Identities=19% Similarity=0.296 Sum_probs=183.8
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+|+.||||++....... ......+.+|++++++++||||+++++++...+ ..++|||
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E 89 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK--SDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVMVIE 89 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc--hhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEE
Confidence 38999999999999997 578999999986432111 112346889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+ +|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 90 ~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 90 YA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 99 78999998644 3699999999999999999999998 999999999999999999999999999987653321
Q ss_pred cc-------cccccCCCCCC-CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS-------DDIENSVLPPL-ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~-------~~~~~~~~~~~-~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+...... .++++|||||||++|||+||+.||.+.....+. . .+.......+.
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-------~-------~i~~~~~~~p~ 229 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-------K-------KVNSCVYVMPD 229 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-------C-------CCCSSCCCCCT
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-------H-------HHHcCCCCCcc
Confidence 11 11233322222 367899999999999999999999754311110 0 00011111222
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 230 ~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 230 FLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 234678899999999999999999999875
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=325.89 Aligned_cols=260 Identities=13% Similarity=0.226 Sum_probs=196.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||||++...... ...+.+.+|++++++++|||||++++++.+......++|||
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 389999999999999985 5899999998643321 22456789999999999999999999998765445799999
Q ss_pred ecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeEEccccccccc
Q 005734 467 YAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL----TDDYAAKVAEICFTTIA 541 (680)
Q Consensus 467 y~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~ki~DFGla~~~ 541 (680)
|+++|+|.+++.... ...+++..++.|+.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 999999999997543 23499999999999999999999998 99999999999999 78888999999999876
Q ss_pred CCCCCccc--ccccCCCC-------------CCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcC-CCC
Q 005734 542 LPKSKVSD--DIENSVLP-------------PLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNE-PRN 604 (680)
Q Consensus 542 ~~~~~~~~--~~~~~~~~-------------~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~-~~~ 604 (680)
........ ..+.+..| ..++.++|||||||++|||+||+.||..... ....+........ +..
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~ 246 (396)
T 4eut_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246 (396)
T ss_dssp CCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTT
T ss_pred cCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcc
Confidence 53322111 11222222 2345679999999999999999999964221 1222222222222 110
Q ss_pred -cccc---------cCcc---cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 605 -FSCM---------IDPS---LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 605 -~~~~---------~d~~---l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.... .... ...........+.+++.+|++.||++||++.++++.++++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 0000 0011 113456777889999999999999999999999999999864
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-36 Score=317.87 Aligned_cols=237 Identities=17% Similarity=0.235 Sum_probs=175.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 128 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVLE 128 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEEEE
Confidence 389999999999999986 57899999986432 2356889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999643 4689999999999999999999998 9999999999999975 88999999999987643
Q ss_pred CCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... .....||......+++++|||||||++|||+||+.||....... ............. ..+.
T Consensus 204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~i~~~~~~~---~~~~---- 274 (349)
T 2w4o_A 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--FMFRRILNCEYYF---ISPW---- 274 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH--HHHHHHHTTCCCC---CTTT----
T ss_pred ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH--HHHHHHHhCCCcc---CCch----
Confidence 211 11222444444567899999999999999999999997543221 1122222221111 1111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+...++.+++.+|++.||++|||+.|+++
T Consensus 275 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122367889999999999999999999987
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-36 Score=320.76 Aligned_cols=234 Identities=14% Similarity=0.169 Sum_probs=179.6
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||+||+++.. +++.||||+++...... ......+..|..++.++ +|||||++++++.+.+ ..++|||
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lV~E 133 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVIE 133 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC------CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEEEEE
Confidence 89999999999999975 67889999987543221 22345678899999887 8999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 134 ~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 134 YVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 99999999999643 3699999999999999999999998 999999999999999999999999999986432211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-----c-cHHHHHHHHhcCCCCcccccCcc
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-----L-SIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.. ...|+......++.++|||||||++|||+||+.||..... . ...............+
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~------- 281 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI------- 281 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCC-------
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCC-------
Confidence 11 1123333445678899999999999999999999963211 1 1111122222221111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+++.+||+.||++||++
T Consensus 282 ----p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 282 ----PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11223678899999999999999995
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=316.73 Aligned_cols=247 Identities=14% Similarity=0.185 Sum_probs=188.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-----CCcccceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-----HKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----H~niv~l~g~~~~~~~~~~~ 462 (680)
+.||+|+||+||+|+. .+++.||||++... ....+.+..|++++++++ |||||++++++...+ ..+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~--~~~ 112 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI------KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD--HMC 112 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSC------HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT--EEE
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccc------hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC--eeE
Confidence 8999999999999997 47889999998632 233456788999999996 999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----------------
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---------------- 526 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---------------- 526 (680)
+||||+ +|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||+++
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccc
Confidence 999999 99999999876656799999999999999999999998 9999999999999986
Q ss_pred ---------CCCeEEcccccccccCCCCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHH
Q 005734 527 ---------DYAAKVAEICFTTIALPKSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIE 592 (680)
Q Consensus 527 ---------~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~ 592 (680)
++.+||+|||+++......... ...|+......++.++|||||||++|||+||+.||......+..
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 268 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence 7889999999998755322211 22344444556889999999999999999999999765544433
Q ss_pred HHHHHHhcCCCC----------cccccCc-----ccCCC--C---------------HHHHHHHHHHHHHccccCCCCCC
Q 005734 593 KWAADYLNEPRN----------FSCMIDP-----SLKSF--K---------------QNELEAICEVIKECIKTDLRQRP 640 (680)
Q Consensus 593 ~~~~~~~~~~~~----------~~~~~d~-----~l~~~--~---------------~~~~~~~~~l~~~C~~~~P~~RP 640 (680)
..+......... ....++. .+... . ......+.+++.+||+.||++||
T Consensus 269 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 348 (360)
T 3llt_A 269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRP 348 (360)
T ss_dssp HHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCC
Confidence 333332221100 0000000 00000 0 00115678999999999999999
Q ss_pred CHHHHHH
Q 005734 641 TMNDIIV 647 (680)
Q Consensus 641 tm~ev~~ 647 (680)
|++|+++
T Consensus 349 ta~elL~ 355 (360)
T 3llt_A 349 SPAELLK 355 (360)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=321.47 Aligned_cols=237 Identities=15% Similarity=0.205 Sum_probs=184.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||+|+.. +|+.||||++...... .......+.+|.+++.++ +|||||++++++.+.+ ..++||
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~--~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lv~ 103 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL--QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFFVM 103 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH--HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc--chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEEEE
Confidence 389999999999999975 6899999998653211 122345688999999988 6999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 104 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 104 EFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 999999999999644 3699999999999999999999998 99999999999999999999999999998643221
Q ss_pred Ccc---cccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS---DDIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~---~~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...+.|.+| ..++.++||||+||++|||+||+.||.......+... .......+.
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~---i~~~~~~~p----------- 244 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA---ILNDEVVYP----------- 244 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHCCCCCC-----------
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHH---HHcCCCCCC-----------
Confidence 111 112233333 2467899999999999999999999986553333332 222211111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTM------NDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm------~ev~~ 647 (680)
......+.+++.+|++.||++||++ +|+++
T Consensus 245 ~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122578899999999999999998 66664
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=318.54 Aligned_cols=247 Identities=19% Similarity=0.393 Sum_probs=188.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEE--EEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEI--AVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~v--aVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+.. +|..+ |||.+.... .....+.+.+|++++.++ +||||+++++++.+.+ ..++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~l 103 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLYL 103 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEEE
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeecccc----chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceEE
Confidence 489999999999999974 56544 888775432 123456789999999999 8999999999999877 7899
Q ss_pred EEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC
Q 005734 464 VFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA 529 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 529 (680)
||||+++|+|.+++.... ...+++..++.++.++++||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997532 34799999999999999999999998 9999999999999999999
Q ss_pred eEEcccccccccCCCC--Ccc-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcC
Q 005734 530 AKVAEICFTTIALPKS--KVS-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 530 ~ki~DFGla~~~~~~~--~~~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
+||+|||+++...... ... ...|+......++.++||||||+++|||+| |+.||.......+. ......
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~---~~~~~~ 257 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY---EKLPQG 257 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---HHGGGT
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH---HHhhcC
Confidence 9999999987543111 001 111222222345788999999999999998 99999765432222 222111
Q ss_pred CCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 602 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
... ..+.....++.+++.+||+.+|++|||++++++.|+++....
T Consensus 258 -~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 258 -YRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp -CCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -CCC---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 100 011122367899999999999999999999999999987544
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=320.37 Aligned_cols=249 Identities=14% Similarity=0.198 Sum_probs=189.2
Q ss_pred ccccCCCCCCeEEEEEeCC---------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccc----------
Q 005734 388 SNIIDTQSGCTIYKGTLSS---------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVN---------- 448 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~---------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~---------- 448 (680)
.+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++|||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 3899999999999999763 789999998643 25789999999999999998
Q ss_pred -----eeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005734 449 -----LIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIY 523 (680)
Q Consensus 449 -----l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 523 (680)
+++++...+. ..++||||+ +|+|.+++.......+++..+++|+.|++.||+|||+. +|+||||||+|||
T Consensus 117 ~~i~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 117 LAIPTCMGFGVHQDK-YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp CSCCCCCEEEEETTT-EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred cCccchhhccccCCc-EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6777776332 679999999 99999999865446799999999999999999999998 9999999999999
Q ss_pred ecCCC--CeEEcccccccccCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcc
Q 005734 524 LTDDY--AAKVAEICFTTIALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEE 586 (680)
Q Consensus 524 ld~~~--~~ki~DFGla~~~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~ 586 (680)
++.++ .+||+|||+++........ ....|+......++.++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 8999999999876422110 011122233346788899999999999999999999764
Q ss_pred c--cccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 587 K--ELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 587 ~--~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
. ...+.............+ .+.... ......++.+++.+||+.||++||++++|++.|+++....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPF---VGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCE---ECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHhccCChhhh---hhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 3 122333333222222111 111100 0112367899999999999999999999999999997544
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=314.85 Aligned_cols=246 Identities=17% Similarity=0.280 Sum_probs=191.2
Q ss_pred cccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 461 (680)
+.||+|+||.||+|+. .+++.||||++..... ....+.+.+|++++.++ +||||+++++++...+. ..
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~-~~ 107 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PL 107 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS-CC
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC----cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC-ce
Confidence 8999999999999984 3568899999865432 23456799999999999 79999999999987552 46
Q ss_pred EEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKEM--------------DHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD 527 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~--------------~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 527 (680)
++||||+++|+|.+++..... ..+++..++.++.++++||+|||+. +|+||||||+||+++.+
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEK 184 (316)
T ss_dssp EEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCC
Confidence 999999999999999975432 2389999999999999999999998 99999999999999999
Q ss_pred CCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccc-cHHHHH
Q 005734 528 YAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKEL-SIEKWA 595 (680)
Q Consensus 528 ~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~-~~~~~~ 595 (680)
+.+||+|||+++......... ...|+......++.++||||||+++|||+| |+.||...... .....+
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~ 264 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence 999999999998764322111 111222223456889999999999999999 99999764322 122222
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
...... . .+.....++.+++.+||+.+|++|||+.||++.|+++...
T Consensus 265 ~~~~~~--~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 265 KEGTRM--R-----------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHTCCC--C-----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCccC--C-----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 211110 0 0111235789999999999999999999999999998754
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=319.09 Aligned_cols=239 Identities=16% Similarity=0.201 Sum_probs=186.3
Q ss_pred hhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCc
Q 005734 385 EDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 385 ~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 460 (680)
++|. +.||+|+||.||+|+.. +|+.||||++...... .......+..|.+++.++ +||||+++++++.+.+ .
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~ 92 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--N 92 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--E
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh--hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--E
Confidence 4454 89999999999999985 6889999998653211 112345678899999887 8999999999999877 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 89999999999999999643 3689999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCc---c-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 541 ALPKSKV---S-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 541 ~~~~~~~---~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
....... . ...|+......++.++|||||||++|||+||+.||.+.....+...+ ......+.
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i---~~~~~~~p------ 238 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYP------ 238 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHCCCCCC------
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---HhCCCCCC------
Confidence 4321111 1 11233333456788999999999999999999999865433333322 22211111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMN-DII 646 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~-ev~ 646 (680)
.....++.+++.+|++.||++||++. +|.
T Consensus 239 -----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 -----RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -----cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11226788999999999999999997 665
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=318.38 Aligned_cols=249 Identities=15% Similarity=0.274 Sum_probs=189.4
Q ss_pred ccccCCCCCCeEEEEEe-----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+++. .+|+.||||++.... ....+.|.+|++++++++||||+++++++...+....+
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 38999999999999984 468899999986543 23456799999999999999999999998765433568
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.... ..+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 121 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999997543 4699999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc------------cHHHHHHHHh
Q 005734 543 PKSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL------------SIEKWAADYL 599 (680)
Q Consensus 543 ~~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~------------~~~~~~~~~~ 599 (680)
...... ...|+......++.++||||||++++||+||+.|+...... .....+...+
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 332110 11122222234577899999999999999999998532100 0011111111
Q ss_pred cCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 600 ~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
...... ..+...+.++.+++.+||+.+|++|||+.||++.|+++.+
T Consensus 277 ~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 277 KNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111110 1122334689999999999999999999999999999864
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=308.89 Aligned_cols=239 Identities=15% Similarity=0.223 Sum_probs=188.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC----------
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD---------- 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~---------- 456 (680)
.+.||+|+||.||+|+.. +|+.||||++.... ..+.+|++++++++||||+++++++...
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 389999999999999986 78999999986543 2467899999999999999999988641
Q ss_pred ----CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEE
Q 005734 457 ----EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532 (680)
Q Consensus 457 ----~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki 532 (680)
.....++||||+++|+|.+++.......+++..++.++.+++.||+|||+. +|+||||||+||++++++.+||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEE
Confidence 111468999999999999999765556799999999999999999999998 9999999999999999999999
Q ss_pred cccccccccCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 533 AEICFTTIALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 533 ~DFGla~~~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
+|||+++......... ...|+......++.++||||||+++|||+||..|+.... ......... ..
T Consensus 164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~~~~~~--~~ 236 (284)
T 2a19_B 164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-----KFFTDLRDG--II 236 (284)
T ss_dssp CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----HHHHHHHTT--CC
T ss_pred CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----HHHHHhhcc--cc
Confidence 9999998765332111 112232333457889999999999999999999875321 111111111 11
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.. ....++.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 237 ~~-----------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 237 SD-----------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp CT-----------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred cc-----------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 11 11256789999999999999999999999999987544
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-36 Score=317.21 Aligned_cols=256 Identities=11% Similarity=0.090 Sum_probs=182.8
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhH------HHHHHHHHHHHHHHHcCCCCcccceeeEEecC-
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWL------KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD- 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~- 456 (680)
.+.||+|+||.||+|... ++..+|||+.......... ......+.+|+..+..++||||+++++++...
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 489999999999999985 5788999988754322111 11123578899999999999999999999872
Q ss_pred -CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC--CeEEc
Q 005734 457 -EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY--AAKVA 533 (680)
Q Consensus 457 -~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~--~~ki~ 533 (680)
+....++||||+ +|+|.+++.... .+++..+++|+.|++.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kL~ 195 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLA 195 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEEEC
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEEEE
Confidence 112679999999 999999997543 799999999999999999999998 999999999999999887 99999
Q ss_pred ccccccccCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc--ccHHHHHH
Q 005734 534 EICFTTIALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE--LSIEKWAA 596 (680)
Q Consensus 534 DFGla~~~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~--~~~~~~~~ 596 (680)
|||+++........ ....|+......++.++|||||||++|||+||+.||..... ........
T Consensus 196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 275 (345)
T 2v62_A 196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKT 275 (345)
T ss_dssp CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHH
T ss_pred eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHH
Confidence 99999876422110 01112222334578899999999999999999999964321 11111111
Q ss_pred HHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 597 DYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 597 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..... ....+..... ....+.++.+++.+||+.||++||++++|++.|+++..
T Consensus 276 ~~~~~---~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 276 NLLDE---LPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHT---TTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred hhccc---ccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111 1100000000 01233689999999999999999999999999998754
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=313.43 Aligned_cols=239 Identities=13% Similarity=0.200 Sum_probs=177.2
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+++. .+|+.||||++....... .......+.+|++++++++|||||++++++...+ ..++
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~l 98 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KLYL 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEEECSS--CEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EEEE
Confidence 38999999999999997 478999999986543211 1223456889999999999999999999999877 6799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 99 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 99 ILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 99999999999999643 3689999999999999999999998 999999999999999999999999999976532
Q ss_pred CCCc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.... ....|+......++.++||||||+++|||+||+.||......... .........+.
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~---~~i~~~~~~~p--------- 241 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI---DKILKCKLNLP--------- 241 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHTCCCCC---------
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH---HHHHhCCCCCC---------
Confidence 2111 112233333456788999999999999999999999865433322 22222211111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
.....++.+++.+||+.||++|| ++.|+++.
T Consensus 242 --~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 242 --PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp --TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred --CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11236788999999999999999 67777653
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=307.76 Aligned_cols=249 Identities=15% Similarity=0.179 Sum_probs=185.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++...... ......+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 82 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEF 82 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS---TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCc---CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEEEEec
Confidence 78999999999999975 6899999998755422 233467889999999999999999999999877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 83 ~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 83 CDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp CSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred CCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 975 666666433 34699999999999999999999998 9999999999999999999999999999876422111
Q ss_pred c--------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcc-ccccHHHHHHHHhcCCCC--ccccc------
Q 005734 548 S--------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEE-KELSIEKWAADYLNEPRN--FSCMI------ 609 (680)
Q Consensus 548 ~--------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~-~~~~~~~~~~~~~~~~~~--~~~~~------ 609 (680)
. ...|+.... ..++.++|||||||+++||+||+.|+... ...+....+......+.. .....
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 1 112332222 23688999999999999999998886432 222233333222222110 00000
Q ss_pred -------CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 -------DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 -------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...+.........++.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00011112234467889999999999999999999986
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=328.10 Aligned_cols=238 Identities=18% Similarity=0.286 Sum_probs=187.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++....... ......+.+|++++++++||||+++++++...+ ..++|||
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~lv~E 96 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS--LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFMVME 96 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH--TTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEe
Confidence 389999999999999975 79999999986432111 123457899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 97 ~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 97 YVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp CCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999999643 4699999999999999999999998 999999999999999999999999999987653321
Q ss_pred cc--cccccCCC-----CC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--DDIENSVL-----PP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--~~~~~~~~-----~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...+.+.+ .. +.++++||||+||++|||+||+.||.+.....+...+ ....... +.
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i---~~~~~~~-----------p~ 237 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI---CDGIFYT-----------PQ 237 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHH---HTTCCCC-----------CT
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHH---hcCCcCC-----------Cc
Confidence 11 11122222 22 3467899999999999999999999865433333222 2211111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 238 ~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 238 YLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 122578899999999999999999999873
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=310.67 Aligned_cols=234 Identities=13% Similarity=0.111 Sum_probs=178.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||+|+.. +|+.||||++...... ......+..|+..+.++ +|||||+++++|.+++ ..++||
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~~lv~ 136 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG---PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--ILYLQT 136 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccC---hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EEEEEE
Confidence 389999999999999986 7999999987543322 22334556666666666 8999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+ +|+|.+++.... ..++|..+.+|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 999 779999886543 4699999999999999999999998 99999999999999999999999999988765322
Q ss_pred Cc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 KV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ....|+... +.+++++|||||||++|||+||..|+..... . .. +.. .... +.+ ..
T Consensus 212 ~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~g~~~~~~~~~--~----~~-~~~-~~~~----~~~---~~ 275 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGEG--W----QQ-LRQ-GYLP----PEF---TA 275 (311)
T ss_dssp ---CCCCCGGGCCGGGGG-TCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--H----HH-HTT-TCCC----HHH---HT
T ss_pred CCcccCCCccccCHhHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccH--H----HH-Hhc-cCCC----ccc---cc
Confidence 11 122244333 3578899999999999999999777654321 1 11 111 0011 100 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+|++.||++|||++|+++
T Consensus 276 ~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 276 GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 12367899999999999999999999986
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-36 Score=307.11 Aligned_cols=238 Identities=15% Similarity=0.239 Sum_probs=178.3
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+|+.||||++...... .......+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 91 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY--KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVLE 91 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhh--hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEEEe
Confidence 38999999999999997 57899999998643211 1122467899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 92 MCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp CCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred cCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 99999999999743 34689999999999999999999998 999999999999999999999999999987642211
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+.......+.++||||||+++|||+||+.||......... ...... +. ..+.
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~--------~~---~~~~ 233 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---NKVVLA--------DY---EMPS 233 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------CCSS--------CC---CCCT
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---HHHhhc--------cc---CCcc
Confidence 1 112234334445688999999999999999999999754322111 111110 00 0111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+|++.||++|||++++++
T Consensus 234 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 22357889999999999999999999985
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=332.35 Aligned_cols=253 Identities=15% Similarity=0.188 Sum_probs=191.3
Q ss_pred HHHHHhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 379 ELDTACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 379 ~l~~~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
++...+++|. ++||+|+||+||+|+.. +++.||||++...... .......+.+|++++.+++|||||+++++|.+
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML--KRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH--HTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh--hHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3333445665 89999999999999986 5788999998643211 11122348899999999999999999999998
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
.+ ..++|||||++|+|.+++... ...+++.....++.+++.||+|||+. +|+||||||+|||+|.++.+||+||
T Consensus 146 ~~--~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DN--NLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SS--EEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CC--EEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 87 789999999999999999753 34699999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCcc----cccccCCC----------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC
Q 005734 536 CFTTIALPKSKVS----DDIENSVL----------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 536 Gla~~~~~~~~~~----~~~~~~~~----------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~ 601 (680)
|+++......... ...+.|.+ ...++.++|||||||++|||+||+.||.+....+....+......
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 299 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 299 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc
Confidence 9998765332211 11223332 235688999999999999999999999865533333332211100
Q ss_pred CCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 005734 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQ--RPTMNDIIVQ 648 (680)
Q Consensus 602 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~--RPtm~ev~~~ 648 (680)
..+. .... ....++.+++.+|+..+|++ ||+++|+++.
T Consensus 300 -~~~p----~~~~----~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 300 -FQFP----TQVT----DVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -CCCC----SSCC----CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -ccCC----cccc----cCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0000 0001 12257889999999888888 9999999864
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-36 Score=314.97 Aligned_cols=248 Identities=15% Similarity=0.246 Sum_probs=182.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCC------CC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDE------PF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~------~~ 459 (680)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++.+++ ||||+++++++.... ..
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCc-----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 389999999999999974 78999999885543 234567899999999996 999999999995321 11
Q ss_pred ceEEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK-EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT 538 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~-~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla 538 (680)
..++|+||+. |+|.+++... ....+++..+++|+.+++.||+|||+. .++|+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 4689999995 7999988642 334699999999999999999999997 122999999999999999999999999999
Q ss_pred cccCCCCCc--------------------ccccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 539 TIALPKSKV--------------------SDDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 539 ~~~~~~~~~--------------------~~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
+........ ....|+.. ....+++++|||||||++|||+||+.||....... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---~~ 262 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR---IV 262 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---hh
Confidence 876532111 01123322 23345778999999999999999999997543211 11
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCC
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~ 658 (680)
......+. .......+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 263 ~~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 263 NGKYSIPP-------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ---CCCCT-------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred cCcccCCc-------------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 11111100 001113578899999999999999999999999999765543
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=302.85 Aligned_cols=240 Identities=13% Similarity=0.209 Sum_probs=188.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++++++||||+++++++.+++ ..++||||
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~ 86 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDL 86 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC---HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEEEEec
Confidence 89999999999999975 6899999998754322 334567899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEcccccccccCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTIALPK 544 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla~~~~~~ 544 (680)
+++|+|.+.+... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 87 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 87 VTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999988644 3689999999999999999999998 9999999999999986655 999999999776533
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...|+......++.++||||||++++||++|+.||...........+...... .. .+...
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~---~~~~~--- 232 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD---YP---SPEWD--- 232 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---CC---TTTTT---
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc---CC---chhhc---
Confidence 2211 11233334456788999999999999999999999765433333322221111 10 11111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 233 -~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 233 -TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 123578899999999999999999999874
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=315.93 Aligned_cols=250 Identities=14% Similarity=0.184 Sum_probs=182.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++||||+++++++...+. ...++
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~l 107 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS---ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 107 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSS---HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccC---HHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEE
Confidence 7899999999999997 47899999998543221 3345678999999999999999999999976531 14599
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 108 VMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 99999 8899999864 3589999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcccccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C------------
Q 005734 544 KSKVSDDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N------------ 604 (680)
Q Consensus 544 ~~~~~~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~------------ 604 (680)
........+.+.+| ..++.++||||+||+++||+||+.||.+....+....+......+. .
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~ 260 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHH
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHH
Confidence 32211112222222 4678999999999999999999999986554333333322221110 0
Q ss_pred ----cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 ----FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 ----~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+...-...+..........+.+++.+|++.||++|||++|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000011111122334678999999999999999999999874
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=304.97 Aligned_cols=240 Identities=16% Similarity=0.260 Sum_probs=183.0
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||+|+||.||++... +|..+|||++...... ...+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 99 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ----VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIVM 99 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeeccccc----hhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEEE
Confidence 3489999999999999974 6889999998654321 12457899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~ 540 (680)
||+++|+|.+++... ....+++..+.+|+.++++||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 999999999998543 235799999999999999999999998 99999999999999 4568899999999987
Q ss_pred cCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 541 ALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
........ ...|+.. ...++.++||||||++++||+||+.||.+............ .. ..... ..
T Consensus 177 ~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~--~~-~~~~~----~~ 248 (285)
T 3is5_A 177 FKSDEHSTNAAGTALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY--KE-PNYAV----EC 248 (285)
T ss_dssp ----------CTTGGGCCHHHH-TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CC-CCCCC------
T ss_pred cCCcccCcCcccccCcCChHHh-ccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhcc--CC-ccccc----cc
Confidence 54322111 1122222 23567889999999999999999999986543332222211 11 11100 00
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.. ...++.+++.+|++.||++|||+.|+++
T Consensus 249 ~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred Cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01 1257889999999999999999999985
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=312.39 Aligned_cols=235 Identities=14% Similarity=0.163 Sum_probs=181.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +|+.||||++....... ....+.+.+|.+++.++ +|||||++++++.+.+ ..++||
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~ 89 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVI 89 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc--hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEEEE
Confidence 389999999999999985 68899999987543221 33456788999999988 8999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 90 e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 999999999999643 3689999999999999999999998 99999999999999999999999999998643211
Q ss_pred Cc--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc------ccHHHHHHHHhcCCCCcccccCc
Q 005734 546 KV--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE------LSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 546 ~~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
.. ....|+......++.++|||||||++|||+||+.||..... ................+
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~------ 238 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI------ 238 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCC------
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCC------
Confidence 11 11123333345678899999999999999999999964211 11111111222221111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+++.+|++.||++||++
T Consensus 239 -----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 239 -----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11223678899999999999999995
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=321.89 Aligned_cols=237 Identities=15% Similarity=0.246 Sum_probs=180.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHc-CCCCcccceeeEEec--CCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR-INHKNFVNLIGYCED--DEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~--~~~~~~~lV 464 (680)
++||+|+||+||++... +|+.||||++... ..+.+|++++.+ .+|||||++++++.. .+....++|
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 68999999999999975 6899999998532 246678888754 489999999999864 111157999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEccccccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIA 541 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~ 541 (680)
||||++|+|.+++.......+++..+..|+.+|+.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 9999999999999866556799999999999999999999998 9999999999999997 789999999999876
Q ss_pred CCCCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccccc----HHHHHHHHhcCCCCcccccC
Q 005734 542 LPKSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELS----IEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 542 ~~~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~d 610 (680)
..... .....|+......++.++|||||||++|||+||+.||....... ....+.. ....+. .
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~---~~~~~~---~ 288 (400)
T 1nxk_A 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---GQYEFP---N 288 (400)
T ss_dssp C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH---TCCCCC---T
T ss_pred CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc---CcccCC---C
Confidence 53221 11223455555677889999999999999999999997543221 2222221 100010 1
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.. .....++.+++.+||+.||++|||+.|+++.
T Consensus 289 ~~~----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 289 PEW----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTT----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111 1223678999999999999999999999975
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=308.04 Aligned_cols=250 Identities=16% Similarity=0.225 Sum_probs=188.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD---PVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLVFEY 83 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccc---hHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEEEEe
Confidence 78999999999999985 5899999988654322 334567889999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 84 CDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp CSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999999988643 3689999999999999999999998 9999999999999999999999999999876532211
Q ss_pred c--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-----------CCccc
Q 005734 548 S--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-----------RNFSC 607 (680)
Q Consensus 548 ~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 607 (680)
. ...|+... ...++.++||||||+++|||+||+.||.+....+....+....... .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 1 11222222 2456889999999999999999999998655443333333322210 00000
Q ss_pred ccCcccCCC------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 608 MIDPSLKSF------KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 608 ~~d~~l~~~------~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+..... ......++.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 01234568899999999999999999999863
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=311.72 Aligned_cols=240 Identities=16% Similarity=0.275 Sum_probs=179.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
++||+|+||+||+|+. .+|+.||||++..... .....+.+|++++.++ +||||+++++++.+.+ ..++|||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e 91 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLVFE 91 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS-----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc-----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEE
Confidence 6799999999999996 4789999999865432 1245688999999985 7999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 99999999999654 3689999999999999999999998 9999999999999998766 99999999876542
Q ss_pred CCCc----------ccccccCCCC----------CCCCCCCCeeehhHHHHHHHhCCCCCCcccccc------------H
Q 005734 544 KSKV----------SDDIENSVLP----------PLADPETNIYSFGILMLEIISGKLPYCEEKELS------------I 591 (680)
Q Consensus 544 ~~~~----------~~~~~~~~~~----------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~------------~ 591 (680)
.... ....+.+..| ..++.++|||||||++|||+||+.||......+ .
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 1100 0011222222 235788999999999999999999997543211 1
Q ss_pred HHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
................ .... ....++.+++.+|++.||++|||++|+++
T Consensus 247 ~~~~~~i~~~~~~~~~---~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 247 NMLFESIQEGKYEFPD---KDWA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHCCCCCCH---HHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhccCcccCc---hhcc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1111111111111110 0001 12357899999999999999999999987
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=305.59 Aligned_cols=238 Identities=15% Similarity=0.200 Sum_probs=188.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +++.+|+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 95 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLE 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccC--HHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEEEEe
Confidence 389999999999999985 57889999886543221 344567899999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+..++.++++||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 96 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 96 LCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp CCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred cCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999999988643 3689999999999999999999998 999999999999999999999999999987642211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+.......+.++||||||++++||+||+.||......+ ............ +.
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~-----------~~ 236 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---TYLRIKKNEYSI-----------PK 236 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHHHHHTTCCCC-----------CT
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhhccCCC-----------cc
Confidence 11 112333334456889999999999999999999997644222 222222221111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 237 HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 122578899999999999999999999975
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=313.68 Aligned_cols=242 Identities=18% Similarity=0.356 Sum_probs=188.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccch---hhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSK---DWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~---~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 463 (680)
+.||+|+||.||+|+.. +|+.||||++...... .......+.+.+|++++.++ +||||+++++++.... ..++
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~l 177 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS--FMFL 177 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--EEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--EEEE
Confidence 89999999999999985 7999999998754321 11233456789999999999 7999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 178 v~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~ 252 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252 (365)
T ss_dssp EECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence 99999999999999643 3689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc--cccccCCC-----------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 544 KSKVS--DDIENSVL-----------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 544 ~~~~~--~~~~~~~~-----------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ...+.+.. ...++.++|||||||++|||+||+.||...........+.. ...... .
T Consensus 253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~---~~~~~~---~ 326 (365)
T 2y7j_A 253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME---GQYQFS---S 326 (365)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCCC---H
T ss_pred CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh---CCCCCC---C
Confidence 32211 11122222 22478899999999999999999999976543333222222 111110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.+.. ....+.+++.+|++.||++|||++|+++
T Consensus 327 ~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 327 PEWDD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 1256889999999999999999999986
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=317.61 Aligned_cols=250 Identities=15% Similarity=0.237 Sum_probs=179.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|.. .+|+.||||++...... ......+.+|+.++.+++ |||||++++++...+....++|||
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e 91 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN---STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFD 91 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CC---HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEE
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccC---hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEec
Confidence 8999999999999996 47899999988543211 234567889999999997 999999999998655335799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||+ |+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 92 ~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 92 YME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp CCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred ccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 997 699999865 3689999999999999999999998 999999999999999999999999999987532100
Q ss_pred c-----------------------------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHH
Q 005734 547 V-----------------------------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA 596 (680)
Q Consensus 547 ~-----------------------------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~ 596 (680)
. ....|+.... ..++.++||||+||+++||+||+.||.+....+....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~ 244 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 0 0111222222 457889999999999999999999998765444433333
Q ss_pred HHhcCCCCc--cccc------------------CcccCCC-------------CHHHHHHHHHHHHHccccCCCCCCCHH
Q 005734 597 DYLNEPRNF--SCMI------------------DPSLKSF-------------KQNELEAICEVIKECIKTDLRQRPTMN 643 (680)
Q Consensus 597 ~~~~~~~~~--~~~~------------------d~~l~~~-------------~~~~~~~~~~l~~~C~~~~P~~RPtm~ 643 (680)
..+..+..- ..+- ....... ......++.+|+.+||+.||++|||++
T Consensus 245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~ 324 (388)
T 3oz6_A 245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN 324 (388)
T ss_dssp HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence 333221100 0000 0000000 002235789999999999999999999
Q ss_pred HHHHH
Q 005734 644 DIIVQ 648 (680)
Q Consensus 644 ev~~~ 648 (680)
|+++.
T Consensus 325 e~l~H 329 (388)
T 3oz6_A 325 DALKH 329 (388)
T ss_dssp HHTTS
T ss_pred HHhCC
Confidence 99876
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=310.16 Aligned_cols=244 Identities=17% Similarity=0.244 Sum_probs=189.3
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.+.||+|+||.||+|+.. +|+.||||++......... .....++.+|++++++++||||+++++++.+.+ ..++|
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 93 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DVVLI 93 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEEEE
Confidence 3489999999999999975 6899999998765422110 112457899999999999999999999999877 77999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEcccccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTI 540 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~ 540 (680)
|||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++ .+||+|||+++.
T Consensus 94 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 94 LELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp ECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999999643 4689999999999999999999998 999999999999999887 799999999987
Q ss_pred cCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 541 ALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
........ ...|+......++.++||||||+++|||+||+.||.......... ......... ++..
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~i~~~~~~~----~~~~ 241 (321)
T 2a2a_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---NITSVSYDF----DEEF 241 (321)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH---HHHTTCCCC----CHHH
T ss_pred cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHhccccc----Chhh
Confidence 65332111 122333334567889999999999999999999997654333222 222211111 1110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......+.+++.+|++.||++|||++|+++
T Consensus 242 ---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 242 ---FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ---HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ---hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0112257889999999999999999999986
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=317.89 Aligned_cols=240 Identities=15% Similarity=0.206 Sum_probs=177.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHH-HHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDT-LSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +++.||||++....... ......+..|..+ ++.++|||||++++++.+.+ ..++||
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~lv~ 118 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK--KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVL 118 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh--hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEEEE
Confidence 489999999999999985 68899999987544221 2334556777776 57789999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 119 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 119 DYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 999999999999643 3688999999999999999999998 99999999999999999999999999998643221
Q ss_pred Ccc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...|+......++.++|||||||++|||+||+.||.......+. .........+. +
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~---~~i~~~~~~~~----~------ 260 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY---DNILNKPLQLK----P------ 260 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH---HHHHHSCCCCC----S------
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHHhcccCCC----C------
Confidence 111 11223333445788999999999999999999999765433332 22222211111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
....++.+++.+|++.||++||++.+.+.++.
T Consensus 261 -~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~ 292 (373)
T 2r5t_A 261 -NITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 292 (373)
T ss_dssp -SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHH
T ss_pred -CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHh
Confidence 12257889999999999999999865444443
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=303.59 Aligned_cols=242 Identities=20% Similarity=0.295 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC--CCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE--PFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lV 464 (680)
...||+|+||+||+|... ++..||+|++..... .....+.+.+|++++++++||||+++++++.... ....++|
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhh---CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 368999999999999874 678899998865432 2344677999999999999999999999986521 1257999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEcccccccccCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIALP 543 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~~~ 543 (680)
|||+++|+|.+++... ..+++..+..|+.+++.||+|||+. .++|+||||||+||+++ +++.+||+|||+++....
T Consensus 108 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999643 3689999999999999999999998 12399999999999998 789999999999976543
Q ss_pred CCCc------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKV------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ....|+... +.++.++||||||+++|||+||+.||..... ............. ....+
T Consensus 185 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~--~~~~~------- 252 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVK--PASFD------- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTCC--CGGGG-------
T ss_pred cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc--HHHHHHHHhccCC--ccccC-------
Confidence 2211 111233222 3578899999999999999999999975432 2222222222111 10111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111257899999999999999999999985
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=327.70 Aligned_cols=246 Identities=15% Similarity=0.164 Sum_probs=188.1
Q ss_pred Hhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 383 ACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 383 ~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
..++|. +.||+|+||+||+|+.. +|+.||||++...... .......+.+|++++..++|||||++++++.+.+
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-- 142 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI--KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR-- 142 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh--hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--
Confidence 344555 89999999999999985 6889999998642211 1112235889999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
..++|||||++|+|.++++.. .+++.....++.+++.||+|||+. +|+||||||+|||+|.++.+||+|||+++
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 789999999999999999643 589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCC----cccccccCCCCC---------CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 540 IALPKSK----VSDDIENSVLPP---------LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 540 ~~~~~~~----~~~~~~~~~~~~---------~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
....... .....+.|.+|+ .++.++|||||||++|||+||+.||...........+...... ..+
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~- 294 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS-LTF- 294 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-CCC-
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc-ccC-
Confidence 7654321 111122333222 2678999999999999999999999865433333322211100 000
Q ss_pred cccCcccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 005734 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQ--RPTMNDIIVQ 648 (680)
Q Consensus 607 ~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~--RPtm~ev~~~ 648 (680)
+... ....++.+++.+|+..+|.+ ||+++||++.
T Consensus 295 ----p~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 295 ----PDDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ----CTTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ----CCcc----cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0000 11267889999999999988 9999999865
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=327.58 Aligned_cols=248 Identities=14% Similarity=0.175 Sum_probs=188.5
Q ss_pred Hhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 383 ACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 383 ~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
..++|. +.||+|+||.||+++.. +|+.||||++...... .......+.+|.+++.+++|||||++++++.+.+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~--~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~-- 134 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML--KRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN-- 134 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--HHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS--
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh--hHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--
Confidence 345565 89999999999999985 7899999998643211 1122345889999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTT 539 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~ 539 (680)
..++||||+++|+|.+++... +..+++..+..++.+|+.||+|||+. +|+||||||+|||+|.++.+||+|||+++
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~ 210 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCL 210 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhhe
Confidence 789999999999999999643 23699999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCcc----cccccCCCC------------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC
Q 005734 540 IALPKSKVS----DDIENSVLP------------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR 603 (680)
Q Consensus 540 ~~~~~~~~~----~~~~~~~~~------------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~ 603 (680)
......... ...+.|.+| ..++.++|||||||++|||+||+.||...........+...... .
T Consensus 211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-~ 289 (412)
T 2vd5_A 211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH-L 289 (412)
T ss_dssp ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-C
T ss_pred eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC-c
Confidence 765432211 112233322 34688999999999999999999999865433333222211100 0
Q ss_pred CcccccCcccCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHHH
Q 005734 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQR---PTMNDIIVQ 648 (680)
Q Consensus 604 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~R---Ptm~ev~~~ 648 (680)
.+ + ........++.+++.+|+. +|.+| |+++||.+.
T Consensus 290 ~~-----p---~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 SL-----P---LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CC-----C-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CC-----C---ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00 0 0011223678999999999 99998 588888754
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-36 Score=311.65 Aligned_cols=246 Identities=12% Similarity=0.183 Sum_probs=187.1
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+++.||||++.... ...++.+|++++.+++|+|++..+++|..... ..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e 85 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVME 85 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEE
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-------cchHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEEEEE
Confidence 38999999999999996 578999999865433 12357899999999999998888887754332 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred cc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99 999999997432 4699999999999999999999998 99999999999999 7889999999999987653
Q ss_pred CCCcc---------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc---cHH-HHHHHHhcCCCC
Q 005734 544 KSKVS---------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL---SIE-KWAADYLNEPRN 604 (680)
Q Consensus 544 ~~~~~---------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~---~~~-~~~~~~~~~~~~ 604 (680)
..... ...|+......+++++|||||||++|||+||+.||...... ... .........+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch--
Confidence 32110 11123333445688899999999999999999999753321 111 1112111111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.. . .....+.++.+++.+||+.+|++|||+++|++.|+++....
T Consensus 239 ~~-~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 239 IE-V-------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HH-H-------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hh-h-------hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 00 0 00112367899999999999999999999999999986543
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=329.03 Aligned_cols=236 Identities=15% Similarity=0.178 Sum_probs=178.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+. .+|+.||||++...... .......+.+|++++++++||||++++++|.+.+ ..++||||
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e~ 229 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV--AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVMEY 229 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC---------------CCCCCSCTTSCCEEEEEEETT--EEEEEECC
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh--hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEEEEee
Confidence 8999999999999997 47899999998643211 1233456889999999999999999999999887 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++.......
T Consensus 230 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 230 ANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp CSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 9999999999643 368999999999999999999998 6 899999999999999999999999999986442211
Q ss_pred c--------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 V--------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~--------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
. ....|+......++.++|||||||++|||+||+.||.......+...+ ......+. .
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i---~~~~~~~p-----------~ 370 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---LMEEIRFP-----------R 370 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHCCCCCC-----------T
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH---HhCCCCCC-----------c
Confidence 1 111233333456789999999999999999999999765433333222 22211111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
....++.+++.+||+.||++|| +++|+++
T Consensus 371 ~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1226788999999999999999 9999986
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=332.19 Aligned_cols=242 Identities=13% Similarity=0.146 Sum_probs=190.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||.||+|+.. +|+.||||++....... ......+.+|++++.+++|||||++++++.+.+ ..++||||
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmEy 265 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTL 265 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEEEEc
Confidence 89999999999999985 79999999986543211 123456889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.......+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~ 342 (576)
T 2acx_A 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342 (576)
T ss_dssp CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence 9999999999766555699999999999999999999998 9999999999999999999999999999876533221
Q ss_pred c-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc-cHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL-SIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+......++.++|||||||++|||+||+.||...... ............+..+. ..
T Consensus 343 ~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p-----------~~ 411 (576)
T 2acx_A 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS-----------ER 411 (576)
T ss_dssp ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC-----------TT
T ss_pred cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC-----------cc
Confidence 1 11233333345788899999999999999999999764322 22222222222211111 12
Q ss_pred HHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
...++.+++.+|++.||++|| +++||++.
T Consensus 412 ~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 236789999999999999999 67888753
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=315.99 Aligned_cols=253 Identities=13% Similarity=0.179 Sum_probs=184.6
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +|+.||||++.............+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 93 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVFDF 93 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEEEC
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEEEEEc
Confidence 89999999999999975 6899999998754322211222356889999999999999999999998777 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++ +|.+++... ...+++..+..++.++++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 94 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (346)
T 1ua2_A 94 MET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 168 (346)
T ss_dssp CSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred CCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc
Confidence 975 899888643 34689999999999999999999998 9999999999999999999999999999876432111
Q ss_pred c--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--CcccccC-c----
Q 005734 548 S--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFSCMID-P---- 611 (680)
Q Consensus 548 ~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d-~---- 611 (680)
. ...|+... ...++.++|||||||++|||++|+.||.+....+....+......+. ....... +
T Consensus 169 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 248 (346)
T 1ua2_A 169 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248 (346)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCccccc
Confidence 1 11122222 23467889999999999999999999987654443333333222211 0110000 0
Q ss_pred --ccCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 612 --SLKSFK-----QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 612 --~l~~~~-----~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....+ .....++.+++.+|++.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000001 2234679999999999999999999999875
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=314.88 Aligned_cols=239 Identities=14% Similarity=0.174 Sum_probs=179.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+++.. +|+.||||++..... ....+.+|+.++++++|||||++++++.+.+ ..++|||
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 96 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA------IDENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIIME 96 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT------SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc------ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEEEE
Confidence 389999999999999985 789999999865331 1245789999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--eEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA--AKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~ki~DFGla~~~~~~ 544 (680)
|+++|+|.+++... ..+++..+..++.++++||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 97 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 97 YASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 99999999999643 3699999999999999999999998 9999999999999987765 999999999754322
Q ss_pred CCc--ccccccCCC-----CCCCC-CCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 545 SKV--SDDIENSVL-----PPLAD-PETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 545 ~~~--~~~~~~~~~-----~~~~s-~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
... ....+.+.. ...++ .++|||||||++|||+||+.||..... ......+............ +.
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~---- 245 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD--DI---- 245 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT--TS----
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC--cC----
Confidence 111 111122222 22333 348999999999999999999976432 3334444443332211111 00
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+||+.||++|||+.|+++.
T Consensus 246 ---~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 246 ---RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 112578899999999999999999999875
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=299.64 Aligned_cols=238 Identities=13% Similarity=0.225 Sum_probs=184.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+ ..++|+|
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 85 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLE 85 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT----THHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch----hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEEEE
Confidence 389999999999999975 7899999998654322 23467899999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999999643 4689999999999999999999998 999999999999999999999999999976532110
Q ss_pred ----------cccccccCCCCCC-CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 547 ----------VSDDIENSVLPPL-ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 547 ----------~~~~~~~~~~~~~-~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
.....|+...... .+.++||||||++++||+||+.||......... + ........... .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~-~~~~~~~~~~~-----~--- 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-Y-SDWKEKKTYLN-----P--- 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-H-HHHHTTCTTST-----T---
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-H-HHhhhcccccC-----c---
Confidence 1112233332222 366799999999999999999999764422111 1 11111111100 0
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......+.+++.+|++.||++|||++|+++
T Consensus 231 -~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 -WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1122357889999999999999999999976
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=305.18 Aligned_cols=238 Identities=16% Similarity=0.239 Sum_probs=182.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+||+|+||.||+|.. .++..||||.+..... ...+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 100 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQ 100 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC--------HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCch-----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEe
Confidence 5899999999999996 5788999998865432 23457899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla~~~~~~~ 545 (680)
+++|+|.+++.... ...+++..+..++.++++||+|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999997543 34578999999999999999999998 9999999999999987 8999999999998764321
Q ss_pred Ccc---cccccCCCC-------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 546 KVS---DDIENSVLP-------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 546 ~~~---~~~~~~~~~-------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
... ...+.+..| ..++.++||||||+++|||+||+.||.....................
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------- 246 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE----------- 246 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC-----------
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc-----------
Confidence 111 111122222 22678899999999999999999999754322211111111111111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.....++.+++.+||+.||++||++.|+++
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11222367889999999999999999999985
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=300.56 Aligned_cols=238 Identities=17% Similarity=0.236 Sum_probs=185.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... ++..+|+|++...... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 86 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-----DVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLVME 86 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEEEEe
Confidence 389999999999999975 5778999988654322 2457899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+.+|+.+++.||+|||+. +|+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 87 LCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred ccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999999998643 3589999999999999999999998 99999999999999 7889999999999987653
Q ss_pred CCCccc--ccccCCC----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKVSD--DIENSVL----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~~~--~~~~~~~----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
...... ..+.+.. .+.+++++||||||++++||+||+.||...........+. ........ ....
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~---~~~~--- 232 (277)
T 3f3z_A 162 GKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIR---EGTFTFPE---KDWL--- 232 (277)
T ss_dssp TSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCCCCCCH---HHHT---
T ss_pred ccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHH---hCCCCCCc---hhhh---
Confidence 322111 1111221 2347889999999999999999999997654333322222 11111110 0000
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+|++.||++|||+.++++
T Consensus 233 -~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 -NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12367889999999999999999999986
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=311.01 Aligned_cols=249 Identities=18% Similarity=0.315 Sum_probs=189.4
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHc--CCCCcccceeeEEecCCC--CceE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR--INHKNFVNLIGYCEDDEP--FNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~~--~~~~ 462 (680)
+.+.||+|+||.||+|+. +|+.||||++.... ...+.+|++++.. ++||||+++++++..... ...+
T Consensus 46 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG--------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred EEeeecCCCCcEEEEEEE-cCccEEEEEeCchh--------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 348999999999999998 48899999985322 3457788888887 789999999999987642 1469
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeecCCCCCCeeecCCCCeEEcc
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH--------HELNPPVAHSNLSSHCIYLTDDYAAKVAE 534 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~~ki~D 534 (680)
+||||+++|+|.+++... .+++..+++++.+++.||+||| +. +|+||||||+|||++.++.+||+|
T Consensus 117 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~D 190 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD 190 (342)
T ss_dssp EEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECC
T ss_pred EEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEE
Confidence 999999999999999643 5899999999999999999999 55 999999999999999999999999
Q ss_pred cccccccCCCCCc-------ccccccCCCCC-----------CCCCCCCeeehhHHHHHHHhC----------CCCCCcc
Q 005734 535 ICFTTIALPKSKV-------SDDIENSVLPP-----------LADPETNIYSFGILMLEIISG----------KLPYCEE 586 (680)
Q Consensus 535 FGla~~~~~~~~~-------~~~~~~~~~~~-----------~~s~~sDVySfGvvllElltG----------~~p~~~~ 586 (680)
||+++........ ....+.+..|+ ..++++|||||||++|||+|| +.||...
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~ 270 (342)
T 1b6c_B 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270 (342)
T ss_dssp CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence 9999776533211 01112222222 122579999999999999999 7787643
Q ss_pred cc--ccHHHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 587 KE--LSIEKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 587 ~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.. .....+....... . ..+.+.. ...++...+.+++.+||+.||++|||+++|+++|+++....
T Consensus 271 ~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 271 VPSDPSVEEMRKVVCEQ-K-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SCSSCCHHHHHHHHTTS-C-----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CcCcccHHHHHHHHHHH-H-----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 21 2233333322221 1 1121111 12456778999999999999999999999999999987543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=310.93 Aligned_cols=256 Identities=18% Similarity=0.297 Sum_probs=180.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHH--HHHHHHcCCCCcccceeeEEec---CCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRK--QVDTLSRINHKNFVNLIGYCED---DEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~--E~~~l~~l~H~niv~l~g~~~~---~~~~~~~ 462 (680)
.+.||+|+||.||+|+. +++.||||++.... ...+.. |+..+..++|+||+++++++.. .+....+
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 38999999999999987 68899999986432 122333 4444556899999999986642 2222458
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL------NPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~------~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
+||||+++|+|.+++... ..+|..+.+|+.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 89 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 999999999999999644 3589999999999999999999873 3489999999999999999999999999
Q ss_pred cccccCCCCCcc-----------cccccCCCC------------CCCCCCCCeeehhHHHHHHHhCCCCCCccccc-c--
Q 005734 537 FTTIALPKSKVS-----------DDIENSVLP------------PLADPETNIYSFGILMLEIISGKLPYCEEKEL-S-- 590 (680)
Q Consensus 537 la~~~~~~~~~~-----------~~~~~~~~~------------~~~s~~sDVySfGvvllElltG~~p~~~~~~~-~-- 590 (680)
+++......... ...+.+.+| ..+++++|||||||++|||+||+.|+...... .
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 998764321100 011122222 23346789999999999999998776432110 0
Q ss_pred -----------HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 591 -----------IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 591 -----------~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
............. ....+.... ........++.+++.+||+.||++|||++|+++.|+++...-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDMQVLVSREK-QRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CTTHHHHCSSCCHHHHHHHHTTSC-CCCCCCTTC-CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HhhhcccCCCchHHHHHhhhcccc-cCCCCCccc-ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 0011111111111 010111111 1123466789999999999999999999999999999975443
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=310.32 Aligned_cols=246 Identities=12% Similarity=0.175 Sum_probs=188.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+|+.||||++..... ..++.+|++++++++|++++..++++...+. ..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e 85 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVME 85 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEE
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-------hhHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEEE
Confidence 38999999999999996 6789999998865432 2358899999999999998887777754432 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+ +|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 999999996433 4699999999999999999999998 99999999999999 5889999999999987653
Q ss_pred CCCcc---------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc---ccHHHH-HHHHhcCCCC
Q 005734 544 KSKVS---------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE---LSIEKW-AADYLNEPRN 604 (680)
Q Consensus 544 ~~~~~---------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~---~~~~~~-~~~~~~~~~~ 604 (680)
..... ...|+......+++++|||||||++|||+||+.||..... ...... .......+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc--
Confidence 32110 1112223334567889999999999999999999975321 122222 22222111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
. ... ....+.++.+++.+||+.||++|||+++|++.|+++....
T Consensus 239 ~-~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 239 I-EVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp H-HHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred h-HHH-------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 0 000 0112367899999999999999999999999999987554
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-36 Score=308.17 Aligned_cols=232 Identities=13% Similarity=0.077 Sum_probs=180.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++....... ....+.|.+|++++.+++||||+++++++.+.+ ..++|||
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 111 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP--DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLVVAE 111 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccC--HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEEEEE
Confidence 379999999999999985 58999999987543221 344577999999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ....+..+|+.|++.||+|||+. +|+||||||+|||+++++.+||+++|..
T Consensus 112 ~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~-------- 176 (286)
T 3uqc_A 112 WIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM-------- 176 (286)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC--------
T ss_pred ecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc--------
Confidence 99999999999532 35567899999999999999998 9999999999999999999999866532
Q ss_pred cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHH
Q 005734 547 VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICE 626 (680)
Q Consensus 547 ~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 626 (680)
..++.++|||||||++|||+||+.||.+....+........... .. +.........+.++.+
T Consensus 177 -----------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~l~~ 238 (286)
T 3uqc_A 177 -----------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAG------QP-IEPADIDRDIPFQISA 238 (286)
T ss_dssp -----------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTS------CB-CCHHHHCTTSCHHHHH
T ss_pred -----------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhcc------CC-CChhhcccCCCHHHHH
Confidence 13678999999999999999999999764422100000000000 00 0000111223467899
Q ss_pred HHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 627 VIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 627 l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
++.+||+.||++| |+.|+++.|+++.....
T Consensus 239 li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 239 VAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 9999999999999 99999999999876543
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=302.74 Aligned_cols=249 Identities=16% Similarity=0.225 Sum_probs=190.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+++.. +|+.||||++......... ....+.+.+|++++++++||||+++++++.+.. ..++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 87 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVVLIL 87 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEEEEE
Confidence 489999999999999986 7899999998765422110 112457899999999999999999999999877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~~ 541 (680)
||+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++ .+||+|||+++..
T Consensus 88 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 88 ELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred eecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 999999999999643 3689999999999999999999998 999999999999998877 8999999999876
Q ss_pred CCCCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
...... ....|+......++.++||||||++++||+||+.||...........+ ........ +..
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~----~~~- 234 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI---SAVNYDFD----EEY- 234 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HTTCCCCC----HHH-
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh---HhcccCCc----chh-
Confidence 432211 112234334456788999999999999999999999765433222222 11111111 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
.......+.+++.+|++.||++||++.|+++. ++.+.
T Consensus 235 --~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 235 --FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp --HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred --cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 01123578899999999999999999999973 45543
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=303.62 Aligned_cols=239 Identities=13% Similarity=0.248 Sum_probs=186.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+++.. +|+.||||++..... .....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 86 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYLVMQ 86 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccc-----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEEEEE
Confidence 489999999999999975 789999999875431 22356889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||++ ++++.+||+|||+++....
T Consensus 87 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 87 LVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred cCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 99999999998643 3689999999999999999999998 99999999999999 7889999999999876543
Q ss_pred CCC------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSK------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... .....|+......++.++||||||+++|||+||+.||.......+...+.. ....... + ..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~---~~~~~~~---~----~~ 231 (304)
T 2jam_A 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE---GYYEFES---P----FW 231 (304)
T ss_dssp BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---CCCCCCT---T----TT
T ss_pred CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CCCCCCc---c----cc
Confidence 211 112234444445568889999999999999999999976543333332222 1111110 0 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+|++.||++|||++|+++.
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 232 DDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1223678999999999999999999999864
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=309.95 Aligned_cols=242 Identities=13% Similarity=0.163 Sum_probs=187.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|... +|+.||||++....... ....++.+|+.++.+++ ||||+++++++.+.+ ..++|||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e 109 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ---DCRAEILHEIAVLELAKSCPRVINLHEVYENTS--EIILILE 109 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE---ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch---HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--eEEEEEE
Confidence 78999999999999975 68999999987543221 22457899999999995 699999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++.......+++..+..|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 99999999999765556899999999999999999999998 9999999999999998 78999999999987653
Q ss_pred CCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.... ....|+......++.++||||||+++|||+||+.||...........+...... ... + .
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---~~~---~----~ 256 (327)
T 3lm5_A 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD---YSE---E----T 256 (327)
T ss_dssp -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---CCT---T----T
T ss_pred ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc---cCc---h----h
Confidence 2211 112234344456788999999999999999999999765433332222221111 110 1 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.......+.+++.+|++.||++|||++++++.
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 257 FSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11223678899999999999999999999864
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=313.52 Aligned_cols=237 Identities=12% Similarity=0.111 Sum_probs=184.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|+.. +|+.||||++...... .......+..|.+++..+ +||||+++++++.+.+ ..++||
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~--~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~ 100 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI--QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVM 100 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEEEE
Confidence 389999999999999986 5788999998653211 122345688999999988 7999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
||+++|+|.+++... ..+++..+..++.+|+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 101 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 101 EYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 999999999999643 3589999999999999999999998 99999999999999999999999999998643221
Q ss_pred Cc---c-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KV---S-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~---~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.. . ...|+......++.++|||||||++|||++|+.||.......+.. ........+ +
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~---~i~~~~~~~-----------p 241 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ---SIMEHNVAY-----------P 241 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCC-----------C
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH---HHHhCCCCC-----------C
Confidence 11 1 112333334567889999999999999999999998654333332 222221111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
.....++.+++.+|++.||++||+ ++||.+
T Consensus 242 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 242 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 122367889999999999999996 466654
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-35 Score=302.65 Aligned_cols=238 Identities=15% Similarity=0.252 Sum_probs=187.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. ++..||||++....... ......+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 94 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK--EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLMLE 94 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch--HHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEEEE
Confidence 389999999999999975 67889999886432111 122457899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.... .+++..+..++.++++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 95 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 95 FAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp CCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred eCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999999996543 589999999999999999999998 999999999999999999999999999876542211
Q ss_pred c------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 547 V------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 547 ~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
. ....|+......++.++||||||+++|||+||+.||......... .........+ +...
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~-----------~~~~ 235 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH---RRIVNVDLKF-----------PPFL 235 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHTTCCCC-----------CTTS
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH---HHHhccccCC-----------CCcC
Confidence 1 112233334456788999999999999999999999764422222 2222211111 1112
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..++.+++.+|++.||++||+++++++.
T Consensus 236 ~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 236 SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 3578899999999999999999999863
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=311.02 Aligned_cols=238 Identities=15% Similarity=0.203 Sum_probs=187.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... +++.+|+|++....... ....+.+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 121 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLE 121 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEe
Confidence 389999999999999985 57889999886543221 345567999999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 122 ~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 122 LCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp CCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred cCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999999998643 3689999999999999999999998 999999999999999999999999999987642211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+......++.++||||||+++|||+||+.||......+... ........+. .
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~-----------~ 262 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL---RIKKNEYSIP-----------K 262 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHHTCCCCC-----------T
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH---HHhcCCCCCC-----------c
Confidence 11 111222233456889999999999999999999997644222222 2211111111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+||+.||++||+++|+++.
T Consensus 263 ~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 263 HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 122578899999999999999999999874
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=316.36 Aligned_cols=237 Identities=16% Similarity=0.272 Sum_probs=181.5
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC--CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||++...+++.||||++...... ......|.+|++++.+++ |||||++++++...+ ..++|||
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~E 136 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME 136 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEeccccc---HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEEEEe
Confidence 899999999999999888999999998754322 344577999999999996 599999999999877 6899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
+.+|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 137 -~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 137 -CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp -CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred -cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 56889999997543 689999999999999999999998 999999999999996 57899999999987643211
Q ss_pred c-----ccccccCCCC----------------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 547 V-----SDDIENSVLP----------------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 547 ~-----~~~~~~~~~~----------------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
. ....+.|.+| ..+++++|||||||++|||+||+.||.... .....+..........
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--~~~~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKLHAIIDPNHEI 287 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC--CHHHHHHHHHCTTSCC
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh--HHHHHHHHHhCccccC
Confidence 1 1111222221 357888999999999999999999997542 1222222332221110
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. .+.....++.+++.+||+.||++|||+.|+++.
T Consensus 288 ~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 288 E---------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp C---------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0 111112578899999999999999999999865
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-36 Score=309.54 Aligned_cols=248 Identities=17% Similarity=0.234 Sum_probs=182.2
Q ss_pred ccccCCCCCCeEEEEEeC--CCC--EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g~--~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||+||+|+.. ++. .||||++...... .....+.|.+|++++++++||||+++++++.... .++
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~~ 97 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---MKM 97 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---CEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---cee
Confidence 389999999999999863 333 5888887643211 1234568999999999999999999999998754 589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+++|+|.+++.... ..+++..+.+++.++++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999997432 3589999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ...|+......++.++||||||+++|||+| |+.||......... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~~~~~~~~~~~----- 245 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL---HKIDKEGERLP----- 245 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---HHHHTSCCCCC-----
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH---HHHHccCCCCC-----
Confidence 32111 111222222345778999999999999999 99999765433322 22222211110
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.....+.++.+++.+||+.+|++|||+.++++.|+++....
T Consensus 246 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 246 ----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 11123367899999999999999999999999999886543
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=323.90 Aligned_cols=249 Identities=13% Similarity=0.194 Sum_probs=183.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||+||+|... +|+.||||++..... .....+.+.+|++++++++|||||++++++..... ...++
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~l 144 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGG---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECcccc---ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEE
Confidence 78999999999999864 689999999865421 13445678999999999999999999999975431 14699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|||||++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 145 v~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 145 VMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred EEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 9999975 57666642 489999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-------------
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR------------- 603 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~------------- 603 (680)
..... ...|+......++.++||||+||+++||++|+.||.+....+....+...+..+.
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~ 296 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence 32111 1223333445678999999999999999999999987554333333322222110
Q ss_pred ------Ccc-----cccCcccC-C---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 604 ------NFS-----CMIDPSLK-S---FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 604 ------~~~-----~~~d~~l~-~---~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... ..+...+. . .......++.+|+.+|++.||++|||++|+++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000000 0 011225678999999999999999999999874
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-37 Score=327.94 Aligned_cols=235 Identities=13% Similarity=0.147 Sum_probs=173.5
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHH---HHHHcCCCCccccee-------eEEecCC
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQV---DTLSRINHKNFVNLI-------GYCEDDE 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~~~~~~ 457 (680)
+.||+|+||.||+|+. .+|+.||||++....... ....+.|.+|+ +.+++++|||||+++ +++.+.+
T Consensus 79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 79 TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC--TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred ceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc--hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 8999999999999996 579999999987543221 23456789999 556666899999998 5555442
Q ss_pred C------------C---ceEEEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 005734 458 P------------F---NRMMVFEYAPNGTVFEHLHIKE-----MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517 (680)
Q Consensus 458 ~------------~---~~~lV~ey~~~GsL~~~l~~~~-----~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDl 517 (680)
. . ..++||||+ +|+|.+++.... ...++|..+++|+.||++||+|||+. +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 1 0 168999999 689999997431 12355789999999999999999998 9999999
Q ss_pred CCCCeeecCCCCeEEcccccccccCCCCCcc----cccccCCCCC-----------CCCCCCCeeehhHHHHHHHhCCCC
Q 005734 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVS----DDIENSVLPP-----------LADPETNIYSFGILMLEIISGKLP 582 (680)
Q Consensus 518 Kp~NILld~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~~~~-----------~~s~~sDVySfGvvllElltG~~p 582 (680)
||+|||++.++.+||+|||+++......... ...||..... .++.++|||||||++|||+||+.|
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999998654321111 1122222222 578899999999999999999999
Q ss_pred CCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 583 YCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
|.+....... ..+.. ... ....++.+++.+||+.||++|||+.|+++
T Consensus 313 f~~~~~~~~~-------------~~~~~-~~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 313 ITKDAALGGS-------------EWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp C------CCS-------------GGGGS-SCC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred Ccccccccch-------------hhhhh-hcc----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9654321110 00100 001 12367889999999999999999999986
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-35 Score=309.73 Aligned_cols=238 Identities=16% Similarity=0.257 Sum_probs=181.4
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC--CcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH--KNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||++...+++.||||++...... ....+.|.+|++++.+++| +||+++++++.+++ ..++||
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~ 88 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVM 88 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc---hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEEEEE
Confidence 3899999999999999989999999998754322 3445679999999999986 99999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|| .+|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 89 e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 95 588999999754 4689999999999999999999998 999999999999997 5779999999998764322
Q ss_pred Cc-----ccccccCCC----------------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC
Q 005734 546 KV-----SDDIENSVL----------------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 546 ~~-----~~~~~~~~~----------------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
.. ....+.+.. ...+++++|||||||++|||+||+.||.... ...............
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKLHAIIDPNHE 239 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC--SHHHHHHHHHCTTSC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh--hHHHHHHHHhcCCcc
Confidence 11 011112221 1456788999999999999999999997533 122222222222111
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. ..+.....++.+++.+||+.||++|||+.|+++.
T Consensus 240 ~---------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 240 I---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp C---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c---------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 0 0111122578899999999999999999999875
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=301.63 Aligned_cols=238 Identities=16% Similarity=0.274 Sum_probs=185.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++...... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 91 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR--SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMVME 91 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEecccccc--chhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEEEe
Confidence 389999999999999985 7899999998643211 1123457899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 92 YVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp CCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred ccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999999999643 3589999999999999999999998 999999999999999999999999999987653221
Q ss_pred cc-------cccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS-------DDIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~-------~~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+..... ..+.++||||||++++||+||+.||.........+.+.. ..... +.
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~-----------~~ 232 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG---GVFYI-----------PE 232 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCCC-----------CT
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc---CcccC-----------ch
Confidence 11 1123332222 235789999999999999999999976543333222221 11111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+|++.||++|||++|+++.
T Consensus 233 ~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 233 YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 122578899999999999999999999874
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=306.19 Aligned_cols=235 Identities=12% Similarity=0.179 Sum_probs=182.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||+||+|... +++.||||++...... .....++.+|+..+.++ +||||+++++++.+.+ ..++|||
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~lv~e 91 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG---SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HMLIQNE 91 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT---SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEEEEEE
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEecccccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEEEE
Confidence 89999999999999985 7899999998754322 23456788999999999 8999999999999877 7799999
Q ss_pred ecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC------------------
Q 005734 467 YAPNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD------------------ 526 (680)
Q Consensus 467 y~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~------------------ 526 (680)
|+++|+|.+++.... ...+++..+.+|+.|+++||+|||+. +|+||||||+||+++.
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-------------------
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 999999999997432 25689999999999999999999998 9999999999999984
Q ss_pred -CCCeEEcccccccccCCCCCccc----ccccCCCCC-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhc
Q 005734 527 -DYAAKVAEICFTTIALPKSKVSD----DIENSVLPP-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLN 600 (680)
Q Consensus 527 -~~~~ki~DFGla~~~~~~~~~~~----~~~~~~~~~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~ 600 (680)
...+||+|||+++.........+ ..|+..... ..++++||||||++++||++|+.++.... ....+. .
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~---~ 242 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIR---Q 242 (289)
T ss_dssp -CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHH---T
T ss_pred CceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHH---c
Confidence 44799999999987654322211 123322222 45578999999999999999998765432 111111 1
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. ... ..+.....++.+++.+||+.||++|||+.|+++
T Consensus 243 ~--~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 243 G--RLP--------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp T--CCC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C--CCC--------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 000 111122367899999999999999999999985
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=315.25 Aligned_cols=266 Identities=14% Similarity=0.134 Sum_probs=190.6
Q ss_pred HHHHHHhhhhc--cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh------hHHHHHHHHHHHHHHHHcCCCCcccce
Q 005734 378 LELDTACEDFS--NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD------WLKSQEMAYRKQVDTLSRINHKNFVNL 449 (680)
Q Consensus 378 ~~l~~~~~~~~--~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~------~~~~~~~~f~~E~~~l~~l~H~niv~l 449 (680)
.++......|. +.||+|+||.||+|...+|..||||++....... ......+.+.+|++++++++||||+++
T Consensus 15 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 94 (362)
T 3pg1_A 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGL 94 (362)
T ss_dssp HHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred HHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccce
Confidence 34555556665 8999999999999999889999999986543221 112345689999999999999999999
Q ss_pred eeEEecCC---CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC
Q 005734 450 IGYCEDDE---PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD 526 (680)
Q Consensus 450 ~g~~~~~~---~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 526 (680)
++++...+ ....++||||++ |+|.+++... ...+++..+..|+.+++.||+|||+. +|+||||||+||+++.
T Consensus 95 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 95 RDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLAD 169 (362)
T ss_dssp SEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred eeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcC
Confidence 99986432 124699999997 6899888743 34699999999999999999999998 9999999999999999
Q ss_pred CCCeEEcccccccccCCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH
Q 005734 527 DYAAKVAEICFTTIALPKSKVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY 598 (680)
Q Consensus 527 ~~~~ki~DFGla~~~~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~ 598 (680)
++.+||+|||+++......... ...|+.... ..++.++|||||||++|||+||+.||.+.........+...
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~ 249 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249 (362)
T ss_dssp TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999997654322111 122332222 45788999999999999999999999865433333333222
Q ss_pred hcCCCC------------------cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 599 LNEPRN------------------FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 599 ~~~~~~------------------~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+.. ...................+.+++.+|++.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 221110 00000000000111223578899999999999999999999874
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=306.22 Aligned_cols=237 Identities=16% Similarity=0.247 Sum_probs=189.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++++++||||+++++++.+.. ..++||||
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 101 (303)
T 3a7i_A 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE----DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEY 101 (303)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS----TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred hhhcccCCeEEEEEEECCCCcEEEEEEecccccH----HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEEe
Confidence 8899999999999986 47899999998654322 23467899999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|+|.+++.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 102 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp CTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 999999999863 3689999999999999999999998 9999999999999999999999999999776532211
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...|+......++.++||||||+++|||+||+.||...........+..... .. + ...
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~----~-------~~~ 242 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--PT----L-------EGN 242 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC--CC----C-------CSS
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCC--CC----C-------ccc
Confidence 1 1223333445678899999999999999999999976543333222221110 00 1 111
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
....+.+++.+||+.+|++|||+.|+++..-
T Consensus 243 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 243 YSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 2357899999999999999999999998643
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=311.35 Aligned_cols=248 Identities=11% Similarity=0.160 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|.. .+|+.||||++...... ......+.+|++++++++|||||++++++.+.+ ..++||||
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 114 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE---EGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHLIFEY 114 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccc---cccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEEEEec
Confidence 8999999999999986 47899999998654321 233456889999999999999999999999887 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-----cCCCCeEEcccccccccC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL-----TDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-----d~~~~~ki~DFGla~~~~ 542 (680)
++ |+|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++...
T Consensus 115 ~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 115 AE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp CS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred CC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 97 59999996543 589999999999999999999998 99999999999999 455569999999998764
Q ss_pred CCCCc--------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccccc-C
Q 005734 543 PKSKV--------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMI-D 610 (680)
Q Consensus 543 ~~~~~--------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~-d 610 (680)
..... ....|+.... ..++.++|||||||++|||+||+.||......+....+......+.. ..... .
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 22111 1122333222 34789999999999999999999999865544333333332222110 00000 0
Q ss_pred c----cc---CCC------CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 P----SL---KSF------KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 ~----~l---~~~------~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+ .. ... ......++.+++.+|++.||++|||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 00 000 0112367889999999999999999999986
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=315.38 Aligned_cols=239 Identities=8% Similarity=0.135 Sum_probs=186.1
Q ss_pred cccCCCCCCeEEEEE------eCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC---CCcccceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGT------LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN---HKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~------~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~ 459 (680)
+.||+|+||+||+|. ..+++.||||++.... ..++..|++++.+++ |+||+++++++...+
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~-- 140 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN-- 140 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS--
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--------hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC--
Confidence 899999999999994 4578899999986432 345778888888886 999999999999887
Q ss_pred ceEEEEEecCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC----------
Q 005734 460 NRMMVFEYAPNGTVFEHLHIK---EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---------- 526 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~---~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---------- 526 (680)
..++|||||++|+|.+++... ....++|..++.|+.|+++||+|||+. +|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccc
Confidence 679999999999999999632 345799999999999999999999998 9999999999999998
Q ss_pred -CCCeEEcccccccccCC---CC-------CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 527 -DYAAKVAEICFTTIALP---KS-------KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 527 -~~~~ki~DFGla~~~~~---~~-------~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
++.+||+|||+++.... .. +.....||......++.++|||||||++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 89999999999975431 11 111222344444567899999999999999999999986432110
Q ss_pred HHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHHhhccCCC
Q 005734 596 ADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQR-PTMNDIIVQLRQVINISPE 658 (680)
Q Consensus 596 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~R-Ptm~ev~~~L~~i~~~~~~ 658 (680)
......+...+ ..+.+.+++..|++.+|.+| |+++++.+.|+++......
T Consensus 293 -----------~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~ 343 (365)
T 3e7e_A 293 -----------CKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343 (365)
T ss_dssp -----------EEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred -----------eeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence 00111111111 13567789999999999999 5799999999998766443
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=326.10 Aligned_cols=236 Identities=11% Similarity=0.157 Sum_probs=185.8
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||.||+++.. +|+.||||++....... ......+.+|++++++++|||||++++++.+.. ..++||||
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~ 266 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK--RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLVMTI 266 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh--hHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEEEEe
Confidence 78999999999999985 69999999986543211 123457889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHIKE--MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~--~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
+++|+|.+++.... ...+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 99999999997543 45699999999999999999999998 99999999999999999999999999998765332
Q ss_pred Ccc---ccc-----ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 546 KVS---DDI-----ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 546 ~~~---~~~-----~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... ... |+......++.++|||||||++|||+||+.||..... ....+...........+
T Consensus 344 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~----------- 412 (543)
T 3c4z_A 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY----------- 412 (543)
T ss_dssp CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCC-----------
T ss_pred cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCC-----------
Confidence 111 112 2333344678899999999999999999999976432 22333333333322111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTM 642 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm 642 (680)
+.....++.+++.+|++.||++||++
T Consensus 413 p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 413 PDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred CcccCHHHHHHHHHhccCCHhHCCCC
Confidence 11223678899999999999999976
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=311.66 Aligned_cols=251 Identities=11% Similarity=0.145 Sum_probs=187.7
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhH------------HHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWL------------KSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~------------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
.+.||+|+||.||+|.. +|+.||||++......... ......|.+|++++++++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 38999999999999999 8999999998643211100 0011679999999999999999999999998
Q ss_pred CCCCceEEEEEecCCCChhhh------hccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCC
Q 005734 456 DEPFNRMMVFEYAPNGTVFEH------LHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~------l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~ 528 (680)
.+ ..++||||+++|+|.++ +.......+++..+..++.+++.||+|||+ . +|+||||||+||+++.++
T Consensus 115 ~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 115 YD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTTS
T ss_pred CC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCCC
Confidence 77 78999999999999999 655446789999999999999999999998 7 999999999999999999
Q ss_pred CeEEcccccccccCCCC------CcccccccCCCCC-CCCC-CCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHh
Q 005734 529 AAKVAEICFTTIALPKS------KVSDDIENSVLPP-LADP-ETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYL 599 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~------~~~~~~~~~~~~~-~~s~-~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~ 599 (680)
.+||+|||+++...... ......|+..... .++. ++||||||++++||+||+.||..... ...... ..
T Consensus 190 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---i~ 266 (348)
T 2pml_X 190 RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN---IR 266 (348)
T ss_dssp CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH---HT
T ss_pred cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH---Hh
Confidence 99999999998754321 1112223333333 3444 89999999999999999999976543 222222 22
Q ss_pred cCCCCccc----ccCccc----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 600 NEPRNFSC----MIDPSL----KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 600 ~~~~~~~~----~~d~~l----~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
........ ...+.. .........++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 21111110 000000 0011223468899999999999999999999986
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=314.11 Aligned_cols=238 Identities=16% Similarity=0.255 Sum_probs=181.7
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||++... +|+.||||++..... .+.+|++++.++ +|||||++++++.+++ ..++||
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~lv~ 95 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVYVVT 95 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEEEEE
Confidence 389999999999999975 688999999864321 245788888888 7999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC----CCeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD----YAAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~----~~~ki~DFGla~~~ 541 (680)
||+++|+|.+++... ..+++.....++.+|+.||+|||+. +|+||||||+|||+.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999643 3699999999999999999999998 99999999999998433 35999999999876
Q ss_pred CCCCCcc---cccccCCCCC-----CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 542 LPKSKVS---DDIENSVLPP-----LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 542 ~~~~~~~---~~~~~~~~~~-----~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
....... ...+.+.+|+ .++.++|||||||++|||+||+.||.........+..............
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~------ 244 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSG------ 244 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCS------
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCc------
Confidence 5332211 1112233322 2466799999999999999999999764333333443333322111110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
........++.+++.+|++.||++||++.|+++.
T Consensus 245 -~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 -GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0111223678899999999999999999999864
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-36 Score=314.85 Aligned_cols=233 Identities=13% Similarity=0.209 Sum_probs=182.2
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhh---HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDW---LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+.||+|+||.||+|+. .+|+.||||++........ .......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~lv 107 (335)
T 3dls_A 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--FFQLV 107 (335)
T ss_dssp EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--EEEEE
Confidence 8999999999999996 5788999999875432110 0012235778999999999999999999999877 67999
Q ss_pred EEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 465 FEYAPNG-TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 465 ~ey~~~G-sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|||+.+| +|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 ~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp EECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 9999877 999998643 3699999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcc-------cccccCCCCCC-CCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 544 KSKVS-------DDIENSVLPPL-ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~-~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
..... ...|+...... .++++||||||+++|||+||+.||...... .......
T Consensus 183 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~~~---------- 243 (335)
T 3dls_A 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------VEAAIHP---------- 243 (335)
T ss_dssp TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------TTTCCCC----------
T ss_pred CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------HhhccCC----------
Confidence 32211 11233222233 377899999999999999999999753210 0000000
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.....++.+++.+||+.||++|||++++++.
T Consensus 244 -~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 -PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122578899999999999999999999874
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-35 Score=303.21 Aligned_cols=242 Identities=16% Similarity=0.194 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||++... ++..||||++....... .......+.+|++++++++||||+++++++...+....++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRR-IPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHH-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccc-cchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 389999999999999974 78899999986543111 1224567999999999999999999999986443336799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++| |.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 164 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164 (305)
T ss_dssp CCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS
T ss_pred hccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCcccc
Confidence 99876 87887665566799999999999999999999998 999999999999999999999999999987642211
Q ss_pred c-----c-----cccccCCC--CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 V-----S-----DDIENSVL--PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~-----~-----~~~~~~~~--~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. . ...|+... ....+.++||||||+++|||+||+.||.........+.+ .......
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i---~~~~~~~--------- 232 (305)
T 2wtk_C 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI---GKGSYAI--------- 232 (305)
T ss_dssp SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHCCCCC---------
T ss_pred ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHH---hcCCCCC---------
Confidence 1 0 11122211 122367899999999999999999999865432222222 2221111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+......+.+++.+||+.||++|||++|+++.
T Consensus 233 --~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 233 --PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11223678899999999999999999999975
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=310.23 Aligned_cols=249 Identities=15% Similarity=0.267 Sum_probs=184.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 105 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD---KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLVFEF 105 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCc---hHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEEEec
Confidence 79999999999999985 5899999988654322 334567889999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 106 ~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 106 VDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp CSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred CCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9999998886533 3699999999999999999999998 9999999999999999999999999999765432111
Q ss_pred c--------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-----------CCccc
Q 005734 548 S--------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-----------RNFSC 607 (680)
Q Consensus 548 ~--------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 607 (680)
. ...|+.... ..++.++||||||+++|||+||+.||......+....+....... .....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 1 112232222 256889999999999999999999997654333222221111110 00000
Q ss_pred ccCcccCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKS------FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...+.+.. .......++.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111110 01123467999999999999999999999986
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=314.39 Aligned_cols=249 Identities=14% Similarity=0.216 Sum_probs=186.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++..... ......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 81 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE----EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFEY 81 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEEEC
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccc----cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEecc
Confidence 78999999999999985 789999998864331 112224668999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
++ |+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156 (324)
T ss_dssp CS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence 97 6999998754 34699999999999999999999998 9999999999999999999999999999865422111
Q ss_pred --------ccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccCc-----
Q 005734 548 --------SDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMIDP----- 611 (680)
Q Consensus 548 --------~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~----- 611 (680)
....|+.... ..++.++|||||||++|||+||+.||.+....+....+......+.. .......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcc
Confidence 1122332222 45788999999999999999999999876555555544444333211 1111100
Q ss_pred ----ccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 612 ----SLK-----SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 612 ----~l~-----~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... ........++.+++.+|++.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000 0011223578899999999999999999999873
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=302.63 Aligned_cols=236 Identities=18% Similarity=0.254 Sum_probs=182.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|... +|+.||||.+.... ...++.+|++++.+++||||+++++++...+ ..++|||
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 104 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIVME 104 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEee
Confidence 389999999999999985 58999999986533 1346889999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999998632 34689999999999999999999998 999999999999999999999999999977643211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...|+......++.++||||||+++|||+||+.||...........+... ..... ..+.
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~---------~~~~ 249 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN--PPPTF---------RKPE 249 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CCCCC---------SSGG
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC--CCccc---------CCcc
Confidence 11 11233333446788999999999999999999999764422222111111 10000 0111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+.+++.+||+.||++|||+.++++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 22367899999999999999999999986
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=337.35 Aligned_cols=243 Identities=15% Similarity=0.252 Sum_probs=190.3
Q ss_pred ccccCCCCCCeEEEEEeC----CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS----SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~----~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|... .+..||||+...... ....+.|.+|+.++++++|||||+++|++.++ ..++
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~~l 467 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS----DSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVWI 467 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEE
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---ceEE
Confidence 378999999999999974 245788888754321 23456799999999999999999999998643 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 468 v~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999999999744 34689999999999999999999998 999999999999999999999999999987653
Q ss_pred CCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 KSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 ~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
..... ...|+......++.++|||||||++|||+| |+.||.+....+....+......
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~------------ 611 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------------ 611 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCC------------
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC------------
Confidence 22111 112222223457888999999999999997 99999865544443333321111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 612 -~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 612 -PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 0112233678999999999999999999999999998864
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=306.80 Aligned_cols=246 Identities=17% Similarity=0.300 Sum_probs=170.7
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|.. .+++.||||++..... ....+++.+|++++++++||||+++++++...+ ..++|||
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 93 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC----QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVMK 93 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC--------------------CCCCCCCTTBCCEEEEEESSS--CEEEEEE
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhc----chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEeh
Confidence 38999999999999986 4788999998864432 223567889999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 467 YAPNGTVFEHLHI------KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 467 y~~~GsL~~~l~~------~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
|+++|+|.+++.. .....+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 1235699999999999999999999998 999999999999999999999999999977
Q ss_pred cCCCCCcc--------cccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcc
Q 005734 541 ALPKSKVS--------DDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606 (680)
Q Consensus 541 ~~~~~~~~--------~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 606 (680)
........ ...+.+..| ..++.++||||||+++|||+||+.||.............. .......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~~~ 248 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ--NDPPSLE 248 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHT--SSCCCTT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhc--cCCCccc
Confidence 64321100 011122222 2468889999999999999999999976543333222111 1111111
Q ss_pred c-ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 C-MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ~-~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. ..++. .......++.+++.+||+.||++||++.|+++
T Consensus 249 ~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKE---MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----C---CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccch---hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 11111 11122357889999999999999999999986
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=304.38 Aligned_cols=238 Identities=15% Similarity=0.200 Sum_probs=182.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|..||+|++..... .....|.+|++++++++||||+++++++...+ ..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 96 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-----EELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIE 96 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC---------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH-----HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEEEE
Confidence 378999999999999985 688999998865432 22457899999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC---
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP--- 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~--- 543 (680)
|+++|+|.+++... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ 172 (302)
T ss_dssp CCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred eCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence 99999999998643 24689999999999999999999998 999999999999999999999999998754321
Q ss_pred -C----CCcccccccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 544 -K----SKVSDDIENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 544 -~----~~~~~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
. .......|+.. ....++.++||||||+++|||+||+.||........ .......... ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~--~~~---- 243 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV---LLKIAKSDPP--TLL---- 243 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCC--CCS----
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH---HHHHhccCCc--ccC----
Confidence 0 11111223322 244568899999999999999999999976443222 2222211110 000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.....++.+++.+||+.||++|||+.++++
T Consensus 244 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 --TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11222367899999999999999999999875
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=313.85 Aligned_cols=250 Identities=12% Similarity=0.181 Sum_probs=186.7
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||++... +|..||+|++..... ....+.+.+|++++++++||||+++++++.+++ ..++||||
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 112 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEH 112 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEEECC
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccC----HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEEEEC
Confidence 89999999999999985 789999999875432 334567999999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC--
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS-- 545 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~-- 545 (680)
+++|+|.+++.... .+++..+.+|+.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 99999999996543 5899999999999999999999732 79999999999999999999999999987543111
Q ss_pred ----CcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC------------CCc----
Q 005734 546 ----KVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP------------RNF---- 605 (680)
Q Consensus 546 ----~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~------------~~~---- 605 (680)
......|+......++.++||||||+++|||+||+.||................... ...
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence 111222343444567889999999999999999999997544222211110000000 000
Q ss_pred ---------ccccC----cccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 ---------SCMID----PSLKS-FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 ---------~~~~d----~~l~~-~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+ ..... .......++.+++.+||+.||++|||++|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000 00000 011123578999999999999999999999864
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=317.29 Aligned_cols=248 Identities=15% Similarity=0.183 Sum_probs=186.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC------CCCcccceeeEEecCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI------NHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l------~H~niv~l~g~~~~~~~~~ 460 (680)
.+.||+|+||+||+|... +++.||||++... ....+.+.+|++++..+ +|+||+++++++...+ .
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~ 173 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN--H 173 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--E
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCc------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--e
Confidence 389999999999999875 6889999998643 23345677888888777 5779999999999877 7
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC--eEEcccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA--AKVAEICFT 538 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~ki~DFGla 538 (680)
.++||||+. |+|.+++.......+++..+.+|+.||+.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 899999995 6999999876666799999999999999999999998 9999999999999999887 999999999
Q ss_pred cccCCCCCccc-----ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--------c
Q 005734 539 TIALPKSKVSD-----DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------F 605 (680)
Q Consensus 539 ~~~~~~~~~~~-----~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------~ 605 (680)
+.......... ..|+......++.++|||||||++|||+||+.||.+....+....+......+.. .
T Consensus 250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~ 329 (429)
T 3kvw_A 250 CYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRA 329 (429)
T ss_dssp EETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTH
T ss_pred eecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhh
Confidence 77553322221 2233333446789999999999999999999999865544333333222211100 0
Q ss_pred ccccC---------------cc------------------cCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 606 SCMID---------------PS------------------LKS----FKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 606 ~~~~d---------------~~------------------l~~----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...++ .. ... ........+.+|+.+||+.||++|||++|+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 330 KNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp HHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 00000 00 000 00111357889999999999999999999986
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=317.22 Aligned_cols=242 Identities=14% Similarity=0.248 Sum_probs=179.0
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchh---hHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKD---WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||+||+|... +++.||||++....... ........+.+|++++++++|||||++++++... ..++
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~~~l 216 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---DYYI 216 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---EEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---ceEE
Confidence 389999999999999874 68999999987543211 0112233588999999999999999999998654 4689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeEEcccccccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAEICFTTI 540 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ki~DFGla~~ 540 (680)
||||+++|+|.+++... ..+++..+..|+.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 217 v~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 217 VLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp EEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred EEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 99999999999998643 4699999999999999999999998 99999999999999654 4599999999987
Q ss_pred cCCCCCcc--cccccCCCCC--------CCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCccccc
Q 005734 541 ALPKSKVS--DDIENSVLPP--------LADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 541 ~~~~~~~~--~~~~~~~~~~--------~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 609 (680)
........ ...+.+.+|+ .++.++|||||||++|||+||+.||..... ..+.+.+..... .. .
T Consensus 292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~---~~---~ 365 (419)
T 3i6u_A 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY---NF---I 365 (419)
T ss_dssp CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC---CC---C
T ss_pred cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC---CC---C
Confidence 65332111 1122333333 346689999999999999999999975432 233333222110 00 0
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+... ....++.+++.+|++.||++|||++|+++
T Consensus 366 ~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 366 PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 00001 12367899999999999999999999986
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=314.34 Aligned_cols=250 Identities=12% Similarity=0.173 Sum_probs=171.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|++++++++||||+++++++..... ...++
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~l 111 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS---IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEE
Confidence 7899999999999986 57899999998643211 2345678899999999999999999999975421 14699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 112 v~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 112 VTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp EEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred Eeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 99999 7899998864 4699999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcc-----cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccC-----
Q 005734 544 KSKVS-----DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMID----- 610 (680)
Q Consensus 544 ~~~~~-----~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d----- 610 (680)
..... ...|+.... ..++.++||||+||+++||+||+.||.+....+....+...+..+.. ...+-.
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~ 264 (367)
T 2fst_X 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHH
T ss_pred cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHH
Confidence 22111 112332222 46788999999999999999999999876544444433333322110 000000
Q ss_pred -----cccCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 -----PSLKS-----FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 -----~~l~~-----~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.... ........+.+|+.+|++.||++|||++|+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000 001123578899999999999999999999874
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=323.45 Aligned_cols=247 Identities=11% Similarity=0.150 Sum_probs=186.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc-ccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN-FVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||.||+|+. .+++.||||++..... ..++..|++++..++|++ +..+..++.+.+ ..+|||
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~lvm 82 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-------HPQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNVLVM 82 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEEEEE
Confidence 38999999999999996 5789999998765432 234789999999998754 555555555555 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~ 542 (680)
||+ +|+|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 83 e~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 99999999743 34699999999999999999999998 99999999999999 688999999999998765
Q ss_pred CCCCcc---------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 543 PKSKVS---------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 543 ~~~~~~---------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
...... ...|+......++.++|||||||++|||+||+.||.+.......+.+....... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--~~~ 235 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--VAT 235 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH--HHS
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc--ccc
Confidence 432211 111222334456788999999999999999999998654333333222221110 000
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+. ......+.++.+++..||+.+|++||++++|++.|+++..
T Consensus 236 ~~~----~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 236 SIE----ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp CHH----HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cHH----HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 0001123688999999999999999999999999999864
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=298.52 Aligned_cols=242 Identities=19% Similarity=0.305 Sum_probs=187.9
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccch----hhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSK----DWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~----~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 462 (680)
+.||+|+||.||+|... +|+.||||++...... .......+.+.+|++++++++ ||||+++++++...+ ..+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~~ 100 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FFF 100 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEE
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--eEE
Confidence 89999999999999985 6899999998754311 112334567899999999996 999999999998876 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 999999999999999653 3689999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc-------cccccCC------CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccccc
Q 005734 543 PKSKVS-------DDIENSV------LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 543 ~~~~~~-------~~~~~~~------~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (680)
...... ...|+.. ....++.++||||||++++||+||+.||...........+.. ......
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~--- 249 (298)
T 1phk_A 176 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS---GNYQFG--- 249 (298)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCCC---
T ss_pred CCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhc---CCcccC---
Confidence 322111 1112211 123567899999999999999999999976543333222222 111110
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.. .....++.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 250 SPEW----DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TTTG----GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccc----cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0111 123367899999999999999999999975
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=302.61 Aligned_cols=221 Identities=16% Similarity=0.264 Sum_probs=174.5
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHH-HcCCCCcccceeeEEec----CCCCceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL-SRINHKNFVNLIGYCED----DEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~~~ 462 (680)
++||+|+||.||++.. .+|+.||||++... ..+.+|++++ +..+||||+++++++.. .. ..+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~--~~~ 91 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK--CLL 91 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE--EEE
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc----------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc--eEE
Confidence 6799999999999997 47899999998532 2466888888 55689999999999875 33 579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEccccccc
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTT 539 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~ 539 (680)
+||||+++|+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 999999999999999876656799999999999999999999998 9999999999999998 7899999999987
Q ss_pred ccCCCCCcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC--
Q 005734 540 IALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK-- 617 (680)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-- 617 (680)
.... ..++.++|||||||++|||+||+.||.......... . ....+.......+
T Consensus 169 ~~~~--------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------~---~~~~~~~~~~~~~~~ 224 (299)
T 3m2w_A 169 ETTG--------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------G---MKTRIRMGQYEFPNP 224 (299)
T ss_dssp ECTT--------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------C---SCCSSCTTCCSSCHH
T ss_pred cccc--------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------H---HHHHHhhccccCCch
Confidence 6532 345778999999999999999999997543211100 0 0000000000111
Q ss_pred --HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 --QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 --~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1234678999999999999999999999974
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-35 Score=305.69 Aligned_cols=252 Identities=14% Similarity=0.203 Sum_probs=185.8
Q ss_pred cccCCCCCCeEEEEEe--CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecC---CCCc
Q 005734 389 NIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDD---EPFN 460 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~--~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~---~~~~ 460 (680)
+.||+|+||.||+|+. .+|+.||||++....... .....+.+|+++++++ +||||++++++|... ....
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 93 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE---GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT---SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEE
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccc---cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCce
Confidence 8999999999999997 468899999987544221 1122456677776665 899999999998721 1125
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++||||++ |+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 94 LTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 799999997 6999999766556799999999999999999999998 999999999999999999999999999976
Q ss_pred cCCCCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--ccc----
Q 005734 541 ALPKSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSC---- 607 (680)
Q Consensus 541 ~~~~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~---- 607 (680)
...... .....|+......++.++||||||+++|||+||+.||.+.........+......+.. ...
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred ccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcccccc
Confidence 542211 1112233334456788999999999999999999999875544443333332221110 000
Q ss_pred ---cc----CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 ---MI----DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ---~~----d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+ ...+..........+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00011122233467889999999999999999999985
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=307.45 Aligned_cols=243 Identities=11% Similarity=0.162 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||+||+|.. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.+......++|||
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK--------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCC--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccc--------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 8999999999999986 578999999986432 346889999999997 999999999998744336799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~~ 545 (680)
|+++++|.+++. .+++..+..++.+++.||+|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 114 ~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 114 HVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp CCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred ccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 999999999984 388999999999999999999998 999999999999999776 89999999998765332
Q ss_pred Ccc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhc----------CCCCcc
Q 005734 546 KVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLN----------EPRNFS 606 (680)
Q Consensus 546 ~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~----------~~~~~~ 606 (680)
... ...|+.... ..++.++|||||||+++||+||+.||..... .+....+..... ......
T Consensus 186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccc
Confidence 211 112222222 4678899999999999999999999953321 111111111000 000000
Q ss_pred ----cc--------cCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 607 ----CM--------IDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 607 ----~~--------~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.. ...... ........++.+++.+|++.||++|||++|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 000000 011123468899999999999999999999986
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=318.78 Aligned_cols=252 Identities=13% Similarity=0.124 Sum_probs=172.1
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~l 463 (680)
.+.||+|+||+||+|... +|+.||||++...... ....+.+.+|+++|++++|||||++++++..... ...++
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 134 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED---LIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSS---HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcC---HHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence 389999999999999864 7899999988643221 3345679999999999999999999999964321 25799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+ +|+|.+++... ..+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 135 v~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 135 VLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99998 57999998643 4699999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCc-----------------------------------ccccccCC-CCCCCCCCCCeeehhHHHHHHHh---------
Q 005734 544 KSKV-----------------------------------SDDIENSV-LPPLADPETNIYSFGILMLEIIS--------- 578 (680)
Q Consensus 544 ~~~~-----------------------------------~~~~~~~~-~~~~~s~~sDVySfGvvllEllt--------- 578 (680)
.... ....||.. ....++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1100 01122321 23457889999999999999999
Q ss_pred --CCCCCCcccc--------------------ccHHHHHHHHhcCCCC-----------------cccccCcccCCCCHH
Q 005734 579 --GKLPYCEEKE--------------------LSIEKWAADYLNEPRN-----------------FSCMIDPSLKSFKQN 619 (680)
Q Consensus 579 --G~~p~~~~~~--------------------~~~~~~~~~~~~~~~~-----------------~~~~~d~~l~~~~~~ 619 (680)
|+.+|.+... .+....+...+..+.. +.......+......
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 5555543210 0111111111111100 000000001111112
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+|+.+||+.||++|||++|+++.
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 24678899999999999999999999975
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=298.92 Aligned_cols=240 Identities=13% Similarity=0.164 Sum_probs=171.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|.. .+|+.||||++...... ....+.+.++...++.++||||+++++++.+++ ..++||||
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e~ 87 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICMEL 87 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CH---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEEEEC
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc---HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEEEeh
Confidence 8999999999999997 57899999998654321 223344555666688889999999999999877 67999999
Q ss_pred cCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 468 APNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 468 ~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
++ |+|.+++.. .....+++..+.+|+.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 88 MD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 97 588888753 23457999999999999999999999843 89999999999999999999999999998764322
Q ss_pred Ccc-------cccccC----CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 546 KVS-------DDIENS----VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 546 ~~~-------~~~~~~----~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
... ...|+. .....++.++||||||+++|||+||+.||..... .. ............. ..
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~-~~~~~~~~~~~~~--~~----- 235 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-PF-QQLKQVVEEPSPQ--LP----- 235 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-HH-HHHHHHHHSCCCC--CC-----
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-hH-HHHHHHhccCCCC--cc-----
Confidence 111 112332 1234567889999999999999999999975321 11 1122222221100 00
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
......++.+++.+|++.||++|||+.|+++
T Consensus 236 --~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 --ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1112367899999999999999999999987
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=314.17 Aligned_cols=252 Identities=15% Similarity=0.233 Sum_probs=183.2
Q ss_pred hhhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC---
Q 005734 384 CEDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE--- 457 (680)
Q Consensus 384 ~~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--- 457 (680)
...|. +.||+|+||+||+|.. .+|+.||||++.... ....+|++++++++|||||++++++....
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---------TSCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---------chHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 34444 8999999999999986 578999999886432 12347999999999999999999985432
Q ss_pred ---------------------------------CCceEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHH
Q 005734 458 ---------------------------------PFNRMMVFEYAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQ 502 (680)
Q Consensus 458 ---------------------------------~~~~~lV~ey~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~ 502 (680)
....++||||++ |+|.+.+.. .....+++..+..++.|+++||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 113689999997 588888753 23457999999999999999999
Q ss_pred HHhcCCCCCeeecCCCCCCeeec-CCCCeEEcccccccccCCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHH
Q 005734 503 YMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIALPKSKVS-------DDIENSVLP-PLADPETNIYSFGILM 573 (680)
Q Consensus 503 yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvl 573 (680)
|||+. +|+||||||+|||++ +++.+||+|||+++......... ...|+.... ..++.++||||+||++
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99998 999999999999998 68899999999998764332211 112232222 3478899999999999
Q ss_pred HHHHhCCCCCCccccccHHHHHHHHhcCCC---------CcccccCcccC------CCCHHHHHHHHHHHHHccccCCCC
Q 005734 574 LEIISGKLPYCEEKELSIEKWAADYLNEPR---------NFSCMIDPSLK------SFKQNELEAICEVIKECIKTDLRQ 638 (680)
Q Consensus 574 lElltG~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~~l~------~~~~~~~~~~~~l~~~C~~~~P~~ 638 (680)
|||++|+.||.+....+....+......+. ......-+.+. ..+.....++.+++.+|++.||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 999999999987554333333222222110 00000001111 012233467899999999999999
Q ss_pred CCCHHHHHHH
Q 005734 639 RPTMNDIIVQ 648 (680)
Q Consensus 639 RPtm~ev~~~ 648 (680)
|||+.|+++.
T Consensus 313 R~t~~e~l~h 322 (383)
T 3eb0_A 313 RINPYEAMAH 322 (383)
T ss_dssp SCCHHHHHTS
T ss_pred CCCHHHHhcC
Confidence 9999999853
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=307.06 Aligned_cols=250 Identities=12% Similarity=0.174 Sum_probs=184.4
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC----ceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF----NRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~~ 462 (680)
.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+.++++++||||+++++++...... ..+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS---EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccc---hHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 378999999999999974 7899999998653321 33456789999999999999999999999876421 248
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||++ |+|.+++. ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 106 lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp EEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 9999997 68988874 2489999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCcc-----cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C-----------
Q 005734 543 PKSKVS-----DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N----------- 604 (680)
Q Consensus 543 ~~~~~~-----~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~----------- 604 (680)
...... ...|+.... ..++.++||||||++++||+||+.||.+....+....+......+. .
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 322111 112332222 4578899999999999999999999986543333222222111100 0
Q ss_pred -----cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 605 -----FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 605 -----~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.....+.+.........++.+++.+|++.||++|||++++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000111112222345788999999999999999999999864
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=311.54 Aligned_cols=250 Identities=12% Similarity=0.186 Sum_probs=182.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC----ceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF----NRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~~ 462 (680)
.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++++++||||+++++++...+.. ..+
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS---EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccc---hhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 378999999999999974 7899999998654322 33456789999999999999999999999876521 238
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+. |+|.+++. ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 124 lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp EEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 9999997 68988874 2489999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCccc-----ccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-Cccccc------
Q 005734 543 PKSKVSD-----DIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-NFSCMI------ 609 (680)
Q Consensus 543 ~~~~~~~-----~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~------ 609 (680)
....... ..|+.... ..++.++|||||||+++||+||+.||.+....+....+......+. .....+
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 3322111 12332222 4678899999999999999999999986543333333222221110 000000
Q ss_pred ----------CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 610 ----------DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 610 ----------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...+.........++.+++.+|++.||++|||++|+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000111224678999999999999999999999875
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=308.92 Aligned_cols=249 Identities=12% Similarity=0.194 Sum_probs=181.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++++++||||+++++++...+. ...++
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~l 107 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI 107 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSS---HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEE
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCC---hHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEE
Confidence 88999999999999864 6889999998754321 3345678899999999999999999999976542 14699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||++ |+|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 108 VMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 999996 58888885 2489999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC--------------
Q 005734 544 KSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-------------- 602 (680)
Q Consensus 544 ~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-------------- 602 (680)
.... ....|+......++.++|||||||++|||+||+.||.+.........+......+
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 259 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 2111 1122343344567899999999999999999999997654332222221111110
Q ss_pred -----CCc-----ccccCccc-CC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 -----RNF-----SCMIDPSL-KS---FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 -----~~~-----~~~~d~~l-~~---~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
... ...+.... .. .......++.+++.+|++.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 00000000 00 012235689999999999999999999999875
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=304.70 Aligned_cols=239 Identities=16% Similarity=0.266 Sum_probs=182.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC----CCceE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~----~~~~~ 462 (680)
+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++.++ +||||+++++++.... ....+
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCcc------cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 8999999999999997 4789999999865432 235688999999999 7999999999997632 12679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++.......+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 999999999999999765556799999999999999999999998 99999999999999999999999999988754
Q ss_pred CCCCc--------ccccccCCC-----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccccc
Q 005734 543 PKSKV--------SDDIENSVL-----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 543 ~~~~~--------~~~~~~~~~-----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (680)
..... ....|+... ...++.++||||||+++|||+||+.||...........+ ..... ....
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~--~~~~ 255 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRNPA--PRLK 255 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSCC--CCCS
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh---hcCcc--ccCC
Confidence 22111 111233222 345788999999999999999999999765432222211 11111 0011
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. ......+.+++.+||+.||++||+++++++.
T Consensus 256 ~-------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 256 S-------KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp C-------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-------cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1 1122578899999999999999999999873
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=313.16 Aligned_cols=242 Identities=14% Similarity=0.194 Sum_probs=184.1
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||.||+++. .+|+.||||++....... .......+.+|++++.++ +||||+++++++...+ ..+
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 135 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ-KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KLH 135 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE-EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh-hhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--eEE
Confidence 38999999999999997 478999999986432110 011233577899999999 6999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 136 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999999754 3689999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCc---------ccccccCCC--CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCcccccC
Q 005734 543 PKSKV---------SDDIENSVL--PPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~---------~~~~~~~~~--~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 610 (680)
..... ....|+... ...++.++|||||||++|||+||+.||..... .................
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----- 285 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----- 285 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCC-----
Confidence 22111 011122222 13457889999999999999999999975432 23333333333221111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
+......+.+++.+||+.||++|| +++|+++.
T Consensus 286 ------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 286 ------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 122235788999999999999999 89998864
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=321.36 Aligned_cols=242 Identities=19% Similarity=0.285 Sum_probs=189.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +|+.||||++....... ......+.+|++++++++|||||++++++.+.+ ..++|+|
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 106 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGE 106 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEe
Confidence 489999999999999975 78999999986543221 123457899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---cCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL---TDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 107 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 107 VYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred cCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999998644 3699999999999999999999998 99999999999999 5678999999999987654
Q ss_pred CCCcc--cccccCCCC----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKVS--DDIENSVLP----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~~--~~~~~~~~~----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
..... ...+.+.+| +.+++++||||+||++|||+||+.||.+.....+...+.. ...... .+.+
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~~---~~~~---- 251 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK---GKYTFE---LPQW---- 251 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCCCC---SGGG----
T ss_pred ccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc---CCCCCC---Cccc----
Confidence 32211 111222222 3578899999999999999999999987654444433332 111111 1111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+|++.+|++|||+.|+++.
T Consensus 252 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 252 KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 1223678899999999999999999999864
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=317.75 Aligned_cols=241 Identities=17% Similarity=0.286 Sum_probs=182.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. ++..||||++...... ......+.+|++++++++|||||+++++|.+.+ ..++|||
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 116 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS---TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYLVME 116 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC--------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC---chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEe
Confidence 489999999999999975 7889999998754321 112456889999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 117 ~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 117 CYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 99999999988644 3689999999999999999999998 9999999999999976 45599999999987653
Q ss_pred CCCccc--ccccCCC----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 544 KSKVSD--DIENSVL----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 544 ~~~~~~--~~~~~~~----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
...... ..+.+.+ ...+++++||||+||++|||+||+.||.+.....+...+.. ..... ..+.+..
T Consensus 192 ~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~---~~~~~~~-- 263 (494)
T 3lij_A 192 QKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK---GKYTF---DSPEWKN-- 263 (494)
T ss_dssp TBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCC---CSGGGTT--
T ss_pred CccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCC---Cchhccc--
Confidence 322111 1122222 24578899999999999999999999987554443333322 11111 1111122
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+++.+||+.+|++|||+.|+++.
T Consensus 264 --~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 264 --VSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp --SCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred --CCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 22578899999999999999999999864
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=306.97 Aligned_cols=252 Identities=15% Similarity=0.191 Sum_probs=186.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC------CCce
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE------PFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~ 461 (680)
+.||+|+||.||+|+. .+|+.||||++....... .....+.+|++++++++||||+++++++.... ....
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 99 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI 99 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS---SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEE
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccc---cchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceE
Confidence 8999999999999998 578999999886544221 22346789999999999999999999998643 1157
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++||||+++ +|.+.+.... ..+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 100 ~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 100 YLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 899999974 8888776433 4699999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCcc------------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C-cc
Q 005734 542 LPKSKVS------------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N-FS 606 (680)
Q Consensus 542 ~~~~~~~------------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~-~~ 606 (680)
....... ...|+.... ..++.++|||||||+++||+||+.||.+.........+........ . ..
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 254 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 4211110 112222222 3468899999999999999999999987654444444444332211 1 11
Q ss_pred cccCcc----cC---C---CCHHH------HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 607 CMIDPS----LK---S---FKQNE------LEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 607 ~~~d~~----l~---~---~~~~~------~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...... +. . ...+. ...+.+++.+|++.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000 00 0 00011 2458899999999999999999999874
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=318.41 Aligned_cols=240 Identities=19% Similarity=0.280 Sum_probs=186.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||||++...... ......+.+|++++++++|||||++++++.+.. ..++|||
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 101 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGE 101 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB---CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEEEEE
Confidence 489999999999999975 7899999998643211 122457899999999999999999999999877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~ki~DFGla~~~~~ 543 (680)
|+++|+|.+.+... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 102 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 102 LYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 99999999988644 3689999999999999999999998 999999999999995 456799999999987653
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
..... ...|+... +.+++++||||+||++|||+||+.||.+.....+...+.. ...... .+.+.
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~~---~~~~~-- 247 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET---GKYAFD---LPQWR-- 247 (486)
T ss_dssp C----CCTTGGGGCCGGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---TCCCSC---SGGGG--
T ss_pred CCccCCCcCCCCCCCHHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCCC---CcccC--
Confidence 32111 11233322 3468889999999999999999999987554443333322 111110 01111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....++.+++.+||+.+|++|||+.++++.
T Consensus 248 --~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 248 --TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 223678899999999999999999999975
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=317.01 Aligned_cols=246 Identities=8% Similarity=0.020 Sum_probs=167.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHH---HHHHcCCCCccccee-------eEEecC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQV---DTLSRINHKNFVNLI-------GYCEDD 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~~~~~ 456 (680)
.+.||+|+||.||+|+.. +|+.||||++....... ......+.+|+ +.|++ +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS--RSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH--HHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEET
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc--ccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecC
Confidence 389999999999999975 78999999997654322 33455677884 55555 799988754 344322
Q ss_pred CC---------------CceEEEEEecCCCChhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeeec
Q 005734 457 EP---------------FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR------MRIIMGTAYCLQYMHHELNPPVAHS 515 (680)
Q Consensus 457 ~~---------------~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~r------l~ia~~ia~gL~yLH~~~~~~ivHr 515 (680)
+. ...++|||||+ |+|.+++.... ..+++..+ +.++.|+++||+|||+. +|+||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHr 218 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHG 218 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccC
Confidence 21 13699999998 89999997532 23466677 88999999999999998 99999
Q ss_pred CCCCCCeeecCCCCeEEcccccccccCCCCCcc-----cccccCCCC--CCCCCCCCeeehhHHHHHHHhCCCCCCcccc
Q 005734 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS-----DDIENSVLP--PLADPETNIYSFGILMLEIISGKLPYCEEKE 588 (680)
Q Consensus 516 DlKp~NILld~~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~--~~~s~~sDVySfGvvllElltG~~p~~~~~~ 588 (680)
||||+|||++.++.+||+|||+++......... ...|+.... ..++.++|||||||++|||+||+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998765332111 122333333 4568899999999999999999999976532
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....+ .. ............ ........++.+++.+||+.||++|||+.++++
T Consensus 299 ~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSW-----KR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCC-----CB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccch-----hh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 110000 00 000000000000 011233468899999999999999999999975
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=330.18 Aligned_cols=236 Identities=12% Similarity=0.122 Sum_probs=186.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|+.. +++.||||++...... .......+..|.+++..+ +||||+++++++.+.+ ..++|||
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~--~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~lV~E 422 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI--QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFVME 422 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH--HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEEEEE
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEeccccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEEEEe
Confidence 89999999999999975 6888999998743211 122345688899999988 7999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++... ..+++..+..|+.+|+.||+|||+. +|+||||||+|||+|.++.+||+|||+++.......
T Consensus 423 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 423 YVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 99999999999754 3699999999999999999999998 999999999999999999999999999986432211
Q ss_pred cc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 547 VS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 547 ~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. ...||......++.++|||||||++|||+||+.||.+.....+ ..........+ +.
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~---~~~i~~~~~~~-----------p~ 563 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---FQSIMEHNVAY-----------PK 563 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHSSCCCC-----------CT
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH---HHHHHhCCCCC-----------Cc
Confidence 11 1123333445678899999999999999999999987543333 33333322111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPTM-----NDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPtm-----~ev~~ 647 (680)
....++.+|+.+|++.||++||++ +||.+
T Consensus 564 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 564 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 223678999999999999999997 56653
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=302.67 Aligned_cols=248 Identities=13% Similarity=0.179 Sum_probs=188.8
Q ss_pred ccccCCCCCCeEEEEEe--CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc------ccceeeEEecCCCC
Q 005734 388 SNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN------FVNLIGYCEDDEPF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~--~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~~ 459 (680)
.+.||+|+||.||+|.. .+|+.||||++... ......+.+|++++.+++|+| ++++++++...+
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~-- 90 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV------DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG-- 90 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT--
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecC------CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC--
Confidence 48999999999999986 36889999998532 233456889999999887654 999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-------------
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD------------- 526 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~------------- 526 (680)
..++||||+ +++|.+++.......+++..+.+++.|+++||+|||+. +|+||||||+|||++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence 789999999 89999999866656799999999999999999999998 9999999999999987
Q ss_pred ------CCCeEEcccccccccCCCCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 527 ------DYAAKVAEICFTTIALPKSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 527 ------~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
++.+||+|||+++......... ...|+......++.++||||||+++|||+||+.||......+....+
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 6789999999998765332221 12233334456789999999999999999999999765433333333
Q ss_pred HHHhcCCCC-c------cccc---------------------C--cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 005734 596 ADYLNEPRN-F------SCMI---------------------D--PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 596 ~~~~~~~~~-~------~~~~---------------------d--~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev 645 (680)
......... . .... . ............++.+++.+||+.||++|||++|+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 332221000 0 0000 0 00011233456789999999999999999999999
Q ss_pred HH
Q 005734 646 IV 647 (680)
Q Consensus 646 ~~ 647 (680)
++
T Consensus 327 l~ 328 (339)
T 1z57_A 327 LK 328 (339)
T ss_dssp TT
T ss_pred hc
Confidence 85
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=299.26 Aligned_cols=242 Identities=14% Similarity=0.226 Sum_probs=180.3
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchh---hHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKD---WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|... +|+.||||++....... ........+.+|++++++++||||+++++++.... .++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~l 91 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED---YYI 91 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS---EEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc---eEE
Confidence 489999999999999975 68899999986543110 11123346889999999999999999999987653 699
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEcccccccc
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFTTI 540 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla~~ 540 (680)
||||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 92 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 92 VLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999998643 4789999999999999999999998 9999999999999987654 99999999987
Q ss_pred cCCCCC-------cccccccCC---CCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHhcCCCCccccc
Q 005734 541 ALPKSK-------VSDDIENSV---LPPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 541 ~~~~~~-------~~~~~~~~~---~~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 609 (680)
...... .....|+.. ....++.++|||||||++|||+||+.||..... ..+...+...... .
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~---- 239 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---F---- 239 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC---C----
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc---c----
Confidence 653211 111223321 234568899999999999999999999975432 2333333221110 0
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.. ......++.+++.+||+.||++||++.++++
T Consensus 240 ~~~~---~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 240 IPEV---WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CHHH---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cchh---hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0000 0112367899999999999999999999984
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=308.11 Aligned_cols=255 Identities=11% Similarity=0.155 Sum_probs=187.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC---CCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE---PFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~l 463 (680)
.+.||+|+||.||+|+.. +|+.||||++..... ......+.+|++++++++||||+++++++.... ....++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK----PLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS----HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc----chHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 389999999999999975 689999999864321 234567889999999999999999999987541 125799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+. |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 999996 699999864 3689999999999999999999998 999999999999999999999999999987652
Q ss_pred CCCc------------------ccccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC
Q 005734 544 KSKV------------------SDDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN 604 (680)
Q Consensus 544 ~~~~------------------~~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 604 (680)
.... ....|+.. ....++.++|||||||++|||++|+.||.+.........+......+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 2110 01112221 1245688899999999999999999999865433333333332222110
Q ss_pred ---cccccCc---------------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 605 ---FSCMIDP---------------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 605 ---~~~~~d~---------------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
......+ .+.........++.+++.+|++.||++|||++|+++. ++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 0000000 0000011234678899999999999999999999873 44443
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=307.50 Aligned_cols=245 Identities=14% Similarity=0.248 Sum_probs=181.5
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||.||+|+..+ .+|||++....... ...+.|.+|++++++++||||+++++++.+.+ ..++|+||
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e~ 110 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIITSL 110 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC---CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECBC
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH---HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEeec
Confidence 4899999999999999864 48999886543211 12345788999999999999999999999877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
+++|+|.+++... ...+++..++.++.++++||+|||+. +|+||||||+||+++ ++.+||+|||+++.......
T Consensus 111 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 111 CKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 9999999999643 34689999999999999999999998 999999999999998 67999999999876431100
Q ss_pred -------c-----ccccccCCC---------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 547 -------V-----SDDIENSVL---------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 547 -------~-----~~~~~~~~~---------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
. ....|+... ...++.++||||||+++|||+||+.||...........+. ....
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~-- 260 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG---TGMK-- 260 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHH---TTCC--
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc---cCCC--
Confidence 0 011122111 2346788999999999999999999997654332222221 1110
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
...... ....++.+++.+||+.+|++|||+.+++++|+++....
T Consensus 261 ~~~~~~-------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 261 PNLSQI-------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCS-------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCcC-------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 000001 11246889999999999999999999999999987654
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=312.48 Aligned_cols=249 Identities=13% Similarity=0.181 Sum_probs=171.1
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
++||+|+||+||+|+.. ++..||||++..... ...+.+|++++++++|||||++++++........++||
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 68999999999999975 578899999864331 23578999999999999999999999654333689999
Q ss_pred EecCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----cCCCCeEEcc
Q 005734 466 EYAPNGTVFEHLHIK-------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL----TDDYAAKVAE 534 (680)
Q Consensus 466 ey~~~GsL~~~l~~~-------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~ki~D 534 (680)
||++ |+|.+++... ....+++..+..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 5888887521 223599999999999999999999998 99999999999999 7789999999
Q ss_pred cccccccCCCCC-----------cccccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCcccc---------ccHHH
Q 005734 535 ICFTTIALPKSK-----------VSDDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKE---------LSIEK 593 (680)
Q Consensus 535 FGla~~~~~~~~-----------~~~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~---------~~~~~ 593 (680)
||+++....... .....|+.... ..++.++|||||||++|||+||+.||..... .+...
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 999987642211 01112332222 3478889999999999999999999964331 11222
Q ss_pred HHHHHhcCCCC--cccccC-------------cccCCCC---------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 594 WAADYLNEPRN--FSCMID-------------PSLKSFK---------QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 594 ~~~~~~~~~~~--~~~~~d-------------~~l~~~~---------~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+...+..+.. ...+.. ....... .....++.+|+.+|++.||++|||++|+++.
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 22222221110 000000 0000000 0013467899999999999999999999874
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=299.89 Aligned_cols=248 Identities=13% Similarity=0.199 Sum_probs=176.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----------
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE---------- 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---------- 457 (680)
+.||+|+||.||+|... +|+.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp EECC-----CEEEEEETTTTEEEEEEEEECCS-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecCC-----hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 78999999999999986 58999999886543 334567899999999999999999999885321
Q ss_pred --CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEcc
Q 005734 458 --PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAE 534 (680)
Q Consensus 458 --~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~D 534 (680)
....++||||++ |+|.+++.. ..+++..+..++.++++||+|||+. +|+||||||+||+++ +++.+||+|
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 125689999997 699999853 3689999999999999999999998 999999999999997 567999999
Q ss_pred cccccccCCCCCcc-----------cccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC
Q 005734 535 ICFTTIALPKSKVS-----------DDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP 602 (680)
Q Consensus 535 FGla~~~~~~~~~~-----------~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~ 602 (680)
||+++......... ...|+.. ....++.++||||||+++|||+||+.||...........+.......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 99998764221110 1112211 12456888999999999999999999998654333322222211110
Q ss_pred C---------CcccccCccc-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 603 R---------NFSCMIDPSL-------KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 603 ~---------~~~~~~d~~l-------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. .....+.... .........++.+++.+|++.||++|||++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 0000000000 00011234678999999999999999999999863
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=316.91 Aligned_cols=243 Identities=16% Similarity=0.242 Sum_probs=184.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhh--------HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDW--------LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~--------~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 459 (680)
+.||+|+||+||+|+.. ++..||||++........ .....+.+.+|++++++++|||||++++++.+..
T Consensus 42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-- 119 (504)
T 3q5i_A 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK-- 119 (504)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--
Confidence 89999999999999975 678999999875432110 0122467899999999999999999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC---CeEEcccc
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY---AAKVAEIC 536 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~ki~DFG 536 (680)
..++|||||++|+|.+++... ..+++..+..|+.+++.||+|||+. +|+||||||+|||++.++ .+||+|||
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 194 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFG 194 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence 789999999999999998643 3699999999999999999999998 999999999999998775 69999999
Q ss_pred cccccCCCCCccc--ccccCCC----CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 537 FTTIALPKSKVSD--DIENSVL----PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 537 la~~~~~~~~~~~--~~~~~~~----~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
+++.......... ..+.+.+ ...+++++||||+||++|||++|+.||.+.....+...+.. .......
T Consensus 195 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~~~--- 268 (504)
T 3q5i_A 195 LSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK---GKYYFDF--- 268 (504)
T ss_dssp TCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCCCCH---
T ss_pred CCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---CCCCCCc---
Confidence 9987654322111 1122222 23578899999999999999999999987554433333322 1111100
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.+.. ...++.+++.+|++.||++|||++|+++.
T Consensus 269 ~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 269 NDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 01111 22578999999999999999999999864
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=312.67 Aligned_cols=187 Identities=13% Similarity=0.129 Sum_probs=149.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~l 463 (680)
.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|++++++++|||||++++++..... ...++
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE---DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc---ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 389999999999999974 688999999864321 13345679999999999999999999999976531 25799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+. |+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 999996 6999999643 4699999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCc------------------------------ccccccC-CCCCCCCCCCCeeehhHHHHHHHhCCCCC
Q 005734 544 KSKV------------------------------SDDIENS-VLPPLADPETNIYSFGILMLEIISGKLPY 583 (680)
Q Consensus 544 ~~~~------------------------------~~~~~~~-~~~~~~s~~sDVySfGvvllElltG~~p~ 583 (680)
.... ....|+. .....++.++||||+||++|||+||..||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 2110 0111222 12345788899999999999999865554
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-34 Score=294.51 Aligned_cols=237 Identities=16% Similarity=0.261 Sum_probs=179.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----------
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE---------- 457 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---------- 457 (680)
+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHT------EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEEE------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred heeccCCcEEEEEEEEcCCCeEEEEEEEecc------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 89999999999999974 7899999998542 234567999999999999999999999986532
Q ss_pred -CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 458 -PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 458 -~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
....++||||+++|+|.+++... ...+++..+++++.++++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCc
Confidence 12568999999999999999743 34678999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCC----------------------cccccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHH
Q 005734 537 FTTIALPKSK----------------------VSDDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEK 593 (680)
Q Consensus 537 la~~~~~~~~----------------------~~~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~ 593 (680)
+++....... .....|+... ...++.++||||||+++|||+| ||.... +...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~~~~ 236 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--ERVN 236 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--hHHH
Confidence 9986542110 0011122222 2357889999999999999999 554221 1112
Q ss_pred HHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 594 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
............. + .........+.+++.+||+.||++|||++++++
T Consensus 237 ~~~~~~~~~~~~~----~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKKLRSVSIEFP----P---DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHSTTCCCC----T---TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhccccccccC----c---cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 2222211111111 1 122233467889999999999999999999986
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=309.86 Aligned_cols=251 Identities=12% Similarity=0.109 Sum_probs=184.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC--------CCcccceeeEEecC--
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN--------HKNFVNLIGYCEDD-- 456 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--------H~niv~l~g~~~~~-- 456 (680)
.+.||+|+||+||+|+. .+|+.||||++... ....+.+.+|++++++++ |+||+++++++...
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecC------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 38899999999999986 46889999998633 233567889999999985 78899999998722
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC--------
Q 005734 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-------- 528 (680)
Q Consensus 457 ~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-------- 528 (680)
.....++||||+ +|+|.+++.......+++..+..|+.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhh
Confidence 112679999999 667777776555567999999999999999999999864 799999999999999775
Q ss_pred -----------------------------------------CeEEcccccccccCCCCCcc-----cccccCCCCCCCCC
Q 005734 529 -----------------------------------------AAKVAEICFTTIALPKSKVS-----DDIENSVLPPLADP 562 (680)
Q Consensus 529 -----------------------------------------~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~~~~s~ 562 (680)
.+||+|||+++......... ...|+......++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 272 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT 272 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCT
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCc
Confidence 79999999998765332221 12233333445788
Q ss_pred CCCeeehhHHHHHHHhCCCCCCccccc------cHHHHHHHHhcCCC--------CcccccCc--c--------------
Q 005734 563 ETNIYSFGILMLEIISGKLPYCEEKEL------SIEKWAADYLNEPR--------NFSCMIDP--S-------------- 612 (680)
Q Consensus 563 ~sDVySfGvvllElltG~~p~~~~~~~------~~~~~~~~~~~~~~--------~~~~~~d~--~-------------- 612 (680)
++|||||||++|||+||+.||...... .....+........ .....+.. .
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 999999999999999999999743211 11111211111100 00000000 0
Q ss_pred ----cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 613 ----LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 613 ----l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....+.+....+.+|+.+||+.||++|||++|+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01234566788999999999999999999999985
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=306.50 Aligned_cols=249 Identities=13% Similarity=0.214 Sum_probs=186.5
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lV 464 (680)
+.||+|+||.||+|... ++..||||++..... ......+.+|++++.+++||||+++++++..... ...++|
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH----QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTC----HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccC----cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 89999999999999974 788899999864331 2345678999999999999999999999975431 246999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
+||++ |+|.+++... .+++..+..|+.+++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 109 QDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99996 6999998643 589999999999999999999998 9999999999999999999999999999876532
Q ss_pred CCcc------c-----ccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccC
Q 005734 545 SKVS------D-----DIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMID 610 (680)
Q Consensus 545 ~~~~------~-----~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d 610 (680)
.... . ..|+.. ....++.++|||||||++|||+||+.||.+....+....+......+.. .....+
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 1111 1 112221 1234688999999999999999999999876555544444333222110 000000
Q ss_pred ------------c---ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 ------------P---SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 ------------~---~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+ .+.........++.+++.+|++.||++|||+.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0000011223578899999999999999999999874
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-34 Score=306.11 Aligned_cols=249 Identities=15% Similarity=0.145 Sum_probs=186.2
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CC-----cccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HK-----NFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~~~~~~ 461 (680)
+.||+|+||+||+|... +|+.||||++... .....++..|++++..++ |+ +|+++++++...+ ..
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~~ 131 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK------KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN--HL 131 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT--EE
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEecc------HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC--ce
Confidence 89999999999999975 6889999998643 223456778888888885 55 4999999998877 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeEEccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYAAKVAEICFTT 539 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~ki~DFGla~ 539 (680)
++||||++ |+|.+++.......+++..+..++.|++.||+|||+. ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999995 6999999876656799999999999999999999952 23899999999999994 57889999999998
Q ss_pred ccCCCCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--------cc
Q 005734 540 IALPKSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------FS 606 (680)
Q Consensus 540 ~~~~~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------~~ 606 (680)
......... ...|+......++.++|||||||++|||+||+.||.+....+....+......+.. ..
T Consensus 210 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 289 (382)
T 2vx3_A 210 QLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKAR 289 (382)
T ss_dssp ETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHH
T ss_pred ecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHH
Confidence 765332211 22344444456789999999999999999999999875544443333332221100 00
Q ss_pred ccc----C-----------------ccc---------------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 005734 607 CMI----D-----------------PSL---------------------KSFKQNELEAICEVIKECIKTDLRQRPTMND 644 (680)
Q Consensus 607 ~~~----d-----------------~~l---------------------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~e 644 (680)
..+ + +.. ......+..++.+|+.+||+.||++|||++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e 369 (382)
T 2vx3_A 290 KFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYY 369 (382)
T ss_dssp HHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred HHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHH
Confidence 000 0 000 0011234467899999999999999999999
Q ss_pred HHH
Q 005734 645 IIV 647 (680)
Q Consensus 645 v~~ 647 (680)
+++
T Consensus 370 ~L~ 372 (382)
T 2vx3_A 370 ALQ 372 (382)
T ss_dssp HTT
T ss_pred Hhc
Confidence 975
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=305.16 Aligned_cols=264 Identities=12% Similarity=0.167 Sum_probs=178.7
Q ss_pred HHHHhhhhc--cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC
Q 005734 380 LDTACEDFS--NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456 (680)
Q Consensus 380 l~~~~~~~~--~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 456 (680)
.....++|. +.||+|+||.||+|+.. +|+.||||++..... ....+.+|++.+.+++|||||++++++...
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR------FRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT------CCCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc------ccHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 344455565 89999999999999984 789999998854321 123467788889999999999999999653
Q ss_pred CC-----CceEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeeecCCCCCCeeecC-
Q 005734 457 EP-----FNRMMVFEYAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMH--HELNPPVAHSNLSSHCIYLTD- 526 (680)
Q Consensus 457 ~~-----~~~~lV~ey~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH--~~~~~~ivHrDlKp~NILld~- 526 (680)
+. ...++||||+++ +|.+.+.. .....+++..+..++.+++.||+||| +. +|+||||||+|||++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 31 126899999976 55554432 24457899999999999999999999 66 9999999999999996
Q ss_pred CCCeEEcccccccccCCCCCcc-------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHH
Q 005734 527 DYAAKVAEICFTTIALPKSKVS-------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADY 598 (680)
Q Consensus 527 ~~~~ki~DFGla~~~~~~~~~~-------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~ 598 (680)
++.+||+|||+++......... ...|+... ...++.++|||||||++|||+||+.||...........+...
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred CCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 8999999999998765332211 11233222 234788999999999999999999999865543333333222
Q ss_pred hcCCC-CcccccCc-----------------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 599 LNEPR-NFSCMIDP-----------------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 599 ~~~~~-~~~~~~d~-----------------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
...+. .....+++ .+.........++.+++.+||+.||++|||+.|+++. ++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 21110 00000000 0011122245789999999999999999999999975 45543
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=311.11 Aligned_cols=253 Identities=14% Similarity=0.201 Sum_probs=181.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CCceE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~ 462 (680)
.+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++|||||++++++.... ....+
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 388999999999999985 68999999885432 12347999999999999999999986422 11357
Q ss_pred EEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-CCeEEccccccc
Q 005734 463 MVFEYAPNGTVFEHLHI--KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-YAAKVAEICFTT 539 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~--~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~ki~DFGla~ 539 (680)
+||||+++ +|.+.+.. .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999975 67666542 2345799999999999999999999998 99999999999999965 678999999998
Q ss_pred ccCCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC---------
Q 005734 540 IALPKSKVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP--------- 602 (680)
Q Consensus 540 ~~~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~--------- 602 (680)
......... ...||.... ..++.++|||||||++|||+||+.||.+....+....+...+..+
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 764322111 112232222 357889999999999999999999998654333222222221111
Q ss_pred CCcccccCcccCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 603 RNFSCMIDPSLKS------FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 603 ~~~~~~~d~~l~~------~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
........+.+.. +......++.+|+.+|++.||++||++.|+++. ++++.
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0011111111111 112234688999999999999999999999864 44443
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=291.51 Aligned_cols=239 Identities=19% Similarity=0.275 Sum_probs=185.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+.. +++.||||++...... ......+.+|++++++++||||+++++++.+.+ ..++|+|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 101 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGE 101 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS---SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc---hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEEEEEE
Confidence 389999999999999985 7899999998654322 123457899999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC---CCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD---YAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ki~DFGla~~~~~ 543 (680)
|+++++|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++....
T Consensus 102 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 102 LYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred ccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 99999999988643 3689999999999999999999998 99999999999999754 4799999999987653
Q ss_pred CCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 544 KSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 544 ~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
..... ...|+... +.++.++||||||+++|||+||+.||...........+.. ...... .+....
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~---~~~~~~- 248 (287)
T 2wei_A 177 NTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET---GKYAFD---LPQWRT- 248 (287)
T ss_dssp CSSCSCHHHHHTTCCHHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH---CCCCCC---SGGGTT-
T ss_pred CCccccccCcccccChHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---CCCCCC---chhhhh-
Confidence 32211 11122222 3478899999999999999999999986543333332222 111110 011111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...++.+++.+|++.||++|||+.|+++
T Consensus 249 ---~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 249 ---ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 2357889999999999999999999987
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=295.93 Aligned_cols=237 Identities=16% Similarity=0.259 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC--CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||++...+|+.||||++...... ......+.+|++++.+++ |+||+++++++...+ ..++|||
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~e 108 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVME 108 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCC---HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEecccccc---ccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEEEEEe
Confidence 899999999999999988999999998754322 334567999999999997 599999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
+.+|+|.+++... ..+++..+..++.++++||+|||+. +|+||||||+||++++ +.+||+|||+++.......
T Consensus 109 -~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 109 -CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp -CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred -cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 5688999999754 3689999999999999999999998 9999999999999975 8899999999987643211
Q ss_pred c----------ccccccCCC-----------CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc
Q 005734 547 V----------SDDIENSVL-----------PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF 605 (680)
Q Consensus 547 ~----------~~~~~~~~~-----------~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 605 (680)
. ....|+... ...++.++||||||+++|||+||+.||..... ...............
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~ 259 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--QISKLHAIIDPNHEI 259 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHHCTTSCC
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH--HHHHHHHHHhccccc
Confidence 1 111222221 13567789999999999999999999975431 122222222221110
Q ss_pred ccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 SCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 ~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+.....++.+++.+||+.||++||+++|+++.
T Consensus 260 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 260 ---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0111113578899999999999999999999874
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=311.09 Aligned_cols=254 Identities=14% Similarity=0.198 Sum_probs=181.6
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
.+.||+|+||+||+|+..++..+|||++..... ...+|++++++++|||||++++++...+. ...++
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 389999999999999998777799998754321 12379999999999999999999965431 13679
Q ss_pred EEEecCCCChhhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEccccccccc
Q 005734 464 VFEYAPNGTVFEHLH-IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIA 541 (680)
Q Consensus 464 V~ey~~~GsL~~~l~-~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~ 541 (680)
||||++++.+....+ ......+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999998644333322 12345799999999999999999999998 999999999999999 7999999999999876
Q ss_pred CCCCCcc-------cccccCCCC-CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC---------
Q 005734 542 LPKSKVS-------DDIENSVLP-PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--------- 604 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~~-~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--------- 604 (680)
....... ...|+.... ..++.++|||||||++|||++|+.||.+....+....+...+..+..
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~ 272 (394)
T 4e7w_A 193 IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPN 272 (394)
T ss_dssp CTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGG
T ss_pred cCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh
Confidence 4322111 112232222 34788999999999999999999999875533333222222211100
Q ss_pred cccccCcccC------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhh
Q 005734 605 FSCMIDPSLK------SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVI 653 (680)
Q Consensus 605 ~~~~~d~~l~------~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~ 653 (680)
.....-+... .+......++.+++.+||+.||++|||+.|+++. ++++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 0000000000 0112234689999999999999999999999875 44443
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-34 Score=300.29 Aligned_cols=242 Identities=13% Similarity=0.214 Sum_probs=166.3
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC--CCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE--PFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lV~ 465 (680)
++||+|+||+||+|... +|+.||||++.... ...+ .....+..++||||+++++++.... ....++||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------KARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH------HHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH------HHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 57999999999999986 78999999985421 1112 2223356678999999999987521 11468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEcccccccccC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIAL 542 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~~ 542 (680)
||+++|+|.+++.......+++.++.+|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 999999999999866656799999999999999999999998 9999999999999976 4569999999998764
Q ss_pred CCCCcc------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 543 PKSKVS------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 543 ~~~~~~------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
...... ...|+......+++++||||||+++|||+||+.||.................... . ..-.+.
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~-~~~~~~---- 256 (336)
T 3fhr_A 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ-Y-GFPNPE---- 256 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTTT----
T ss_pred ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc-c-ccCchh----
Confidence 322111 1123333333456779999999999999999999975442222111111111000 0 000011
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......++.+++.+|++.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11233678899999999999999999999974
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=298.47 Aligned_cols=248 Identities=13% Similarity=0.165 Sum_probs=186.7
Q ss_pred ccccCCCCCCeEEEEEeC-CC-CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc------ccceeeEEecCCCC
Q 005734 388 SNIIDTQSGCTIYKGTLS-SG-VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN------FVNLIGYCEDDEPF 459 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g-~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~~ 459 (680)
.+.||+|+||+||+|... ++ ..||||++... ......+.+|++++++++|+| ++.+.+++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-- 95 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNV------GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG-- 95 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT--
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEccc------ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC--
Confidence 389999999999999974 44 68999998632 233457888999999997766 899999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---------------
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYL--------------- 524 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--------------- 524 (680)
..++||||+ +|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 789999999 67888888766556799999999999999999999998 99999999999999
Q ss_pred ----cCCCCeEEcccccccccCCCCCcc-----cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH
Q 005734 525 ----TDDYAAKVAEICFTTIALPKSKVS-----DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA 595 (680)
Q Consensus 525 ----d~~~~~ki~DFGla~~~~~~~~~~-----~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~ 595 (680)
+.++.+||+|||+++......... ...|+......++.++|||||||++|||+||+.||...........+
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 668899999999998755332221 12234344456789999999999999999999999865543333333
Q ss_pred HHHhcCCCC--------cccccCc----------------------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 005734 596 ADYLNEPRN--------FSCMIDP----------------------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645 (680)
Q Consensus 596 ~~~~~~~~~--------~~~~~d~----------------------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev 645 (680)
......... ....... ...........++.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 333221100 0000000 0001123345689999999999999999999999
Q ss_pred HH
Q 005734 646 IV 647 (680)
Q Consensus 646 ~~ 647 (680)
++
T Consensus 332 l~ 333 (355)
T 2eu9_A 332 LL 333 (355)
T ss_dssp TT
T ss_pred hc
Confidence 85
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=293.10 Aligned_cols=240 Identities=15% Similarity=0.222 Sum_probs=167.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|... +|+.||||++...... ....+.+..+..+++.++||||+++++++.+.+ ..++||||
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 105 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK---EENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIAMEL 105 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCH---HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccc---hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEEEec
Confidence 78999999999999985 7899999998754322 223344555666788889999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHH-ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
+ ++.+..+.. .....+++..+..++.++++||+|||+ . +|+||||||+||+++.++.+||+|||+++.......
T Consensus 106 ~-~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 106 M-GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp C-SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred c-CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 9 445544443 334578999999999999999999998 4 899999999999999999999999999976543211
Q ss_pred c-------ccccccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 547 V-------SDDIENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 547 ~-------~~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
. ....|+.. ....++.++||||||+++|||+||+.||..... ..+............. +..
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~----~~~- 253 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--DFEVLTKVLQEEPPLL----PGH- 253 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHHHHHSCCCCC----CSS-
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--cHHHHHHHhccCCCCC----Ccc-
Confidence 1 11123322 234567889999999999999999999975321 1122222222211100 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++||+++++++.
T Consensus 254 ---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 254 ---MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---CCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1122578899999999999999999999863
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=308.40 Aligned_cols=236 Identities=14% Similarity=0.146 Sum_probs=173.9
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||+||.+...+|+.||||++.... ...+.+|++++.++ +|||||++++++.+.+ ..++||||
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~lv~E~ 90 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--------CDIALMEIKLLTESDDHPNVIRYYCSETTDR--FLYIALEL 90 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECC
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eEEEEEec
Confidence 7899999999987767789999999886432 23578899999886 8999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCC-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCC-------------CC
Q 005734 468 APNGTVFEHLHIKEMD-----HLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDD-------------YA 529 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~-----~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-------------~~ 529 (680)
+. |+|.+++...... ..++..+++|+.||+.||+|||+. +|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 95 7999999754321 123345678999999999999998 99999999999999754 58
Q ss_pred eEEcccccccccCCCCCc------------ccccccCCC-------CCCCCCCCCeeehhHHHHHHHh-CCCCCCccccc
Q 005734 530 AKVAEICFTTIALPKSKV------------SDDIENSVL-------PPLADPETNIYSFGILMLEIIS-GKLPYCEEKEL 589 (680)
Q Consensus 530 ~ki~DFGla~~~~~~~~~------------~~~~~~~~~-------~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~ 589 (680)
+||+|||+++........ ....|+... ...++.++|||||||++|||+| |+.||.+....
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999876532211 111222221 2457889999999999999999 99999754321
Q ss_pred cHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 590 SIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.......... .... + .........++.+++.+||+.||++|||+.||++
T Consensus 247 -~~~i~~~~~~----~~~~--~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 -ESNIIRGIFS----LDEM--K--CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HHHHHHTCCC----CCCC--T--TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHhcCCCC----cccc--c--ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1122211111 1100 0 0123456678999999999999999999999985
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=296.21 Aligned_cols=242 Identities=14% Similarity=0.197 Sum_probs=173.4
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHH-HHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVD-TLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||.||+|... +|+.||||++..... .....++..|+. +++.++||||+++++++.+.+ ..++|||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~e 101 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD----EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICME 101 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC----HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccC----chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEEe
Confidence 78999999999999985 789999999875432 223345566666 777789999999999999877 7799999
Q ss_pred ecCCCChhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHI---KEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~---~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|+++ +|.+++.. .....+++..+.+++.++++||+|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9974 88887752 23457999999999999999999999842 799999999999999999999999999987643
Q ss_pred CCCcc-------cccccCC----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS-------DDIENSV----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~-------~~~~~~~----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...|+.. ....++.++||||||+++|||+||+.||..... ..+........ ..+.
T Consensus 179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~-------~~~~ 249 (327)
T 3aln_A 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS--VFDQLTQVVKG-------DPPQ 249 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCS-------CCCC
T ss_pred ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcch--HHHHHHHHhcC-------CCCC
Confidence 22111 1123332 233467899999999999999999999975321 11111111110 0011
Q ss_pred cC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 613 LK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 613 l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+. ........++.+++.+||+.||++||++.++++.
T Consensus 250 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 11 0111234678999999999999999999999763
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=300.44 Aligned_cols=252 Identities=15% Similarity=0.191 Sum_probs=184.2
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-----------CCcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-----------HKNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~ 455 (680)
.+.||+|+||+||+|+. .+|+.||||++... ......+.+|++++.+++ |+||+++++++..
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCC------ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 48999999999999997 57899999998632 223456889999999886 8999999999875
Q ss_pred CCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec------CC
Q 005734 456 DEP--FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT------DD 527 (680)
Q Consensus 456 ~~~--~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld------~~ 527 (680)
.++ ...++||||+ +++|.+++.......+++..+.+|+.|++.||+|||+.+ +|+||||||+|||++ ..
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCc
Confidence 431 2468999999 899999997655567999999999999999999999853 799999999999994 44
Q ss_pred CCeEEcccccccccCCCCCccc-----ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc------cHHHHHH
Q 005734 528 YAAKVAEICFTTIALPKSKVSD-----DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL------SIEKWAA 596 (680)
Q Consensus 528 ~~~ki~DFGla~~~~~~~~~~~-----~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~------~~~~~~~ 596 (680)
+.+||+|||+++.......... ..|+......++.++|||||||++|||+||+.||...... .....+.
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254 (373)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence 5899999999987653322221 2233333456789999999999999999999999753311 1111111
Q ss_pred HHhcCC------------------CCcccccC----------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 597 DYLNEP------------------RNFSCMID----------PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 597 ~~~~~~------------------~~~~~~~d----------~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
..+... .....+.. ......+.....++.+|+.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 111110 00000000 00012346677899999999999999999999999873
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=294.32 Aligned_cols=234 Identities=17% Similarity=0.343 Sum_probs=175.3
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcC----CCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRI----NHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l----~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||.||+|+. .+|+.||||++......... ......+.+|++++.++ +|+||+++++++...+ ..
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~--~~ 113 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE--GF 113 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-------C
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC--eE
Confidence 38999999999999986 47889999998654322111 11234567899999998 8999999999998776 56
Q ss_pred EEEEEe-cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEccccccc
Q 005734 462 MMVFEY-APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTT 539 (680)
Q Consensus 462 ~lV~ey-~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~ 539 (680)
++|+|| +++++|.+++... ..+++..++.++.++++||+|||+. +|+||||||+||+++ +++.+||+|||+++
T Consensus 114 ~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 114 MLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp EEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred EEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence 999999 7899999999653 3689999999999999999999998 999999999999999 88999999999998
Q ss_pred ccCCCCCcc-cccccCCCC-----C-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 540 IALPKSKVS-DDIENSVLP-----P-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 540 ~~~~~~~~~-~~~~~~~~~-----~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
......... .....+..| . ..+.++||||||+++|||+||+.||.... +... ....+
T Consensus 189 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~----~~~~~------- 252 (312)
T 2iwi_A 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-----EILE----AELHF------- 252 (312)
T ss_dssp ECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHH----TCCCC-------
T ss_pred hcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-----HHhh----hccCC-------
Confidence 765332111 111122222 1 22457999999999999999999996532 1111 10111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
+.....++.+++.+||+.+|++|||++|+++.
T Consensus 253 ----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 253 ----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11123578899999999999999999999873
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=296.77 Aligned_cols=233 Identities=14% Similarity=0.270 Sum_probs=179.3
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHH-HHHHHHHHHHHHHHcCC--CCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLK-SQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~-~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+. .+|+.||||++.......... .....+.+|++++++++ |+||+++++++..++ ..++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~~~l 125 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SFVL 125 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--cEEE
Confidence 38999999999999986 578999999987543221100 11235778999999996 599999999999877 6799
Q ss_pred EEEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEccccccccc
Q 005734 464 VFEYAPN-GTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIA 541 (680)
Q Consensus 464 V~ey~~~-GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~ 541 (680)
|+||+.+ ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+++..
T Consensus 126 v~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~ 200 (320)
T 3a99_A 126 ILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL 200 (320)
T ss_dssp EEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence 9999976 8999999653 3689999999999999999999998 999999999999999 7899999999999876
Q ss_pred CCCCCcc-cccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS-DDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~-~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...+.+..| ...+.++||||||+++|||+||+.||.... .... ..... ..
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~----~~~~~----~~--- 264 (320)
T 3a99_A 201 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EIIR----GQVFF----RQ--- 264 (320)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HHHH----CCCCC----SS---
T ss_pred ccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-----hhhc----ccccc----cc---
Confidence 5322111 111222222 223677899999999999999999996532 1111 11111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+||+.||++|||++||++
T Consensus 265 ----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 265 ----RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12257889999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=304.50 Aligned_cols=233 Identities=16% Similarity=0.185 Sum_probs=170.1
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.+.. ..++||||
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E~ 99 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIEL 99 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTE--------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEEEC
Confidence 89999999996655556789999999864321 1356899999999 7999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-----CCCCeEEcccccccccC
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-----DDYAAKVAEICFTTIAL 542 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-----~~~~~ki~DFGla~~~~ 542 (680)
|+ |+|.+++.... ....+..++.|+.||++||+|||+. +|+||||||+|||++ ....+||+|||+++...
T Consensus 100 ~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 96 69999997543 2345556789999999999999998 999999999999994 33468899999998765
Q ss_pred CCCC-----------cccccccCCC---CCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCccc
Q 005734 543 PKSK-----------VSDDIENSVL---PPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 543 ~~~~-----------~~~~~~~~~~---~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (680)
.... .....|+... ....+.++|||||||+++||+| |+.||...... ... ..... .....
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-~~~---~~~~~-~~~~~ 249 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-QAN---ILLGA-CSLDC 249 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-HHH---HHTTC-CCCTT
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-HHH---HHhcc-CCccc
Confidence 3211 1111233332 2345668999999999999999 99998643311 111 11111 11110
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..........+.+++.+||+.||++|||++||++
T Consensus 250 ------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 ------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0112234456889999999999999999999984
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.2e-33 Score=312.35 Aligned_cols=259 Identities=14% Similarity=0.168 Sum_probs=190.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CCceE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~ 462 (680)
.+.||+|+||.||+|.. .+|+.||||++..... ....+.|.+|++++++++|||||++++++.... ....+
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~----~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~ 94 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS----PKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 94 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC----HHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC----HHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEE
Confidence 48999999999999997 4689999998864321 344567999999999999999999999976511 12568
Q ss_pred EEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCC---eEEcccccc
Q 005734 463 MVFEYAPNGTVFEHLHIKE-MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYA---AKVAEICFT 538 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~-~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ki~DFGla 538 (680)
+||||+++|+|.+++.... ...+++..+..|+.+++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 9999999999999997543 34689999999999999999999998 9999999999999997664 899999999
Q ss_pred cccCCCCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-------CC
Q 005734 539 TIALPKSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-------RN 604 (680)
Q Consensus 539 ~~~~~~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~-------~~ 604 (680)
+........ ....|+......++.++||||||+++|||+||+.||.... ....|........ ..
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW--QPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC--HHHHSSTTCC------CCSCCC
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc--chhhhhhhhhcccchhhhhhhh
Confidence 876533211 1223444445567889999999999999999999996532 1122211110000 00
Q ss_pred ccc--ccCcc---cCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHHhhcc
Q 005734 605 FSC--MIDPS---LKSFKQNELEAICEVIKECIKTDLRQRPTMND-----IIVQLRQVINI 655 (680)
Q Consensus 605 ~~~--~~d~~---l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~e-----v~~~L~~i~~~ 655 (680)
... .+... ...........+.+++.+|++.||++|||+.+ ..+.++++...
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 000 00001 11234556788999999999999999999988 55677777543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-32 Score=316.59 Aligned_cols=232 Identities=15% Similarity=0.162 Sum_probs=177.7
Q ss_pred ccccCCCCCCeEEEEEeC--CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC---ceE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF---NRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---~~~ 462 (680)
.+.||+|+||.||+|... +|+.||||++..... ......|.+|++++.+++|||||++++++...+.. ..+
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~ 160 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD----AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGY 160 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC----HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC----HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeE
Confidence 389999999999999975 689999998864321 23456789999999999999999999999875521 159
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
|||||+++++|.+++.. .++|.+++.|+.||++||+|||+. +|+||||||+|||++++ .+||+|||+++...
T Consensus 161 lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 161 IVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999999988743 699999999999999999999998 99999999999999986 89999999998765
Q ss_pred CCCCcccccccCCCCC----CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 543 PKSKVSDDIENSVLPP----LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 543 ~~~~~~~~~~~~~~~~----~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
...... ..+.+..|+ ..+.++|||||||+++||++|..|+.+..... ... .....
T Consensus 233 ~~~~~~-gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------~~~------~~~~~ 291 (681)
T 2pzi_A 233 SFGYLY-GTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------LPE------DDPVL 291 (681)
T ss_dssp CCSCCC-CCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------CCT------TCHHH
T ss_pred cCCccC-CCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccc--------------ccc------ccccc
Confidence 432221 222333332 23778999999999999999998876422100 000 00001
Q ss_pred HHHHHHHHHHHHccccCCCCCCC-HHHHHHHHHHh
Q 005734 619 NELEAICEVIKECIKTDLRQRPT-MNDIIVQLRQV 652 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPt-m~ev~~~L~~i 652 (680)
.....+.+++.+||+.||++||+ ++++...|..+
T Consensus 292 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 292 KTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 22357889999999999999995 77777777655
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-32 Score=298.68 Aligned_cols=236 Identities=13% Similarity=0.131 Sum_probs=165.6
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC-Ccccceee---------E----
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-KNFVNLIG---------Y---- 452 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g---------~---- 452 (680)
.++||+|+||.||+|+. .+|+.||||++....... ....+.|.+|+.+++.++| +|...... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 160 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc--HHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence 37999999999999995 579999999887433221 2234679999999999987 32211111 1
Q ss_pred --------EecCC---CCceEEEEEecCCCChhhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecC
Q 005734 453 --------CEDDE---PFNRMMVFEYAPNGTVFEHLH-----IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516 (680)
Q Consensus 453 --------~~~~~---~~~~~lV~ey~~~GsL~~~l~-----~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrD 516 (680)
..... ....+++|+++ +|+|.+++. ......++|..++.|+.|+++||+|||+. +|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrD 236 (413)
T 3dzo_A 161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTY 236 (413)
T ss_dssp C---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 11111 11346666665 789999984 22344688999999999999999999998 999999
Q ss_pred CCCCCeeecCCCCeEEcccccccccCCCCCcc----cccccCC----------CCCCCCCCCCeeehhHHHHHHHhCCCC
Q 005734 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVS----DDIENSV----------LPPLADPETNIYSFGILMLEIISGKLP 582 (680)
Q Consensus 517 lKp~NILld~~~~~ki~DFGla~~~~~~~~~~----~~~~~~~----------~~~~~s~~sDVySfGvvllElltG~~p 582 (680)
|||+|||++.++.+||+|||+++......... ...||.. ....++.++|||||||++|||+||+.|
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999988754321111 1122222 222356789999999999999999999
Q ss_pred CCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 583 YCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
|.......... .++. .... .+.++.+++.+||+.||++||++.++++
T Consensus 317 f~~~~~~~~~~-------------~~~~-~~~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGSE-------------WIFR-SCKN----IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCSG-------------GGGS-SCCC----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhHH-------------HHHh-hccc----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 97643221111 1111 0011 2267899999999999999999777643
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-31 Score=278.24 Aligned_cols=238 Identities=11% Similarity=0.088 Sum_probs=167.4
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh---hHHHHHHHHHHHHHHHHcCC---------CCcccceeeEEe-
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD---WLKSQEMAYRKQVDTLSRIN---------HKNFVNLIGYCE- 454 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~---------H~niv~l~g~~~- 454 (680)
.+.||+|+||+||+|+. +|+.||||++....... ......+.+.+|++++++++ |||||++.+.+.
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 48999999999999998 68999999998654210 01112356788888888885 666666666542
Q ss_pred ----------------c-------------CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 005734 455 ----------------D-------------DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH 505 (680)
Q Consensus 455 ----------------~-------------~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH 505 (680)
+ .+ ..++||||+++|++.+.+.. ..+++.....|+.|++.||+|||
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD--QLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTT--CEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccC--eEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 33 67999999999987777643 46899999999999999999999
Q ss_pred -cCCCCCeeecCCCCCCeeecCCC--------------------CeEEcccccccccCCCCC---cccccccCCCCCCCC
Q 005734 506 -HELNPPVAHSNLSSHCIYLTDDY--------------------AAKVAEICFTTIALPKSK---VSDDIENSVLPPLAD 561 (680)
Q Consensus 506 -~~~~~~ivHrDlKp~NILld~~~--------------------~~ki~DFGla~~~~~~~~---~~~~~~~~~~~~~~s 561 (680)
+. +|+||||||+|||++.++ .+||+|||+++....... .....|+...... +
T Consensus 179 ~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~ 254 (336)
T 2vuw_A 179 ASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-D 254 (336)
T ss_dssp HHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-S
T ss_pred HhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-c
Confidence 77 999999999999999887 899999999987654321 1112233333223 7
Q ss_pred CCCCeeehhHH-HHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCC
Q 005734 562 PETNIYSFGIL-MLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRP 640 (680)
Q Consensus 562 ~~sDVySfGvv-llElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RP 640 (680)
.++||||++++ .+++++|..||.... ............. .... ............++.+|+.+|++.|
T Consensus 255 ~~~Diwsl~~~~~~~~~~g~~p~~~~~--~~~~~~~~~~~~~-~~~~---~~~~~~~~~~s~~~~dli~~~L~~d----- 323 (336)
T 2vuw_A 255 YQFDIYRLMKKENNNRWGEYHPYSNVL--WLHYLTDKMLKQM-TFKT---KCNTPAMKQIKRKIQEFHRTMLNFS----- 323 (336)
T ss_dssp HHHHHHHHHHHHHTTCTTSCCTHHHHH--HHHHHHHHHHHTC-CCSS---CCCSHHHHHHHHHHHHHHHHGGGSS-----
T ss_pred cceehhhhhCCCCcccccccCCCcchh--hhhHHHHhhhhhh-ccCc---ccchhhhhhcCHHHHHHHHHHhccC-----
Confidence 78999998777 777888999985321 0011111111110 0000 0001122456678999999999976
Q ss_pred CHHHHH
Q 005734 641 TMNDII 646 (680)
Q Consensus 641 tm~ev~ 646 (680)
|++|++
T Consensus 324 sa~e~l 329 (336)
T 2vuw_A 324 SATDLL 329 (336)
T ss_dssp SHHHHH
T ss_pred CHHHHH
Confidence 888887
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.93 E-value=4e-26 Score=238.69 Aligned_cols=156 Identities=28% Similarity=0.479 Sum_probs=145.0
Q ss_pred CchHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCCc--cceeeeCC----CcEeEEEcCCCCCcc--cCCcccCCCCCCC
Q 005734 27 SLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCL--WSGVRCLN----GKVQMLDMKERSLEG--TLAPDLGKLSDLR 98 (680)
Q Consensus 27 ~~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c~--w~gv~c~~----~~l~~L~l~~~~l~g--~~p~~~~~l~~L~ 98 (680)
|...|+.||++||+++. +|. .+.+|.. +.+||. |.||.|.. ++|+.|+|++|.++| .+|+.++.+++|+
T Consensus 3 c~~~~~~aL~~~k~~~~-~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHhcC-Ccc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 45689999999999984 665 7899975 457888 99999974 799999999999999 8999999999999
Q ss_pred EEEccC-ccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCc
Q 005734 99 FLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 99 ~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
+|+|++ |.+.+.+|..++++++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..++.+++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCC
Q 005734 178 LTSAEVAG 185 (680)
Q Consensus 178 ~~~g~~p~ 185 (680)
.++|.+|.
T Consensus 160 ~l~~~~p~ 167 (313)
T 1ogq_A 160 RISGAIPD 167 (313)
T ss_dssp CCEEECCG
T ss_pred cccCcCCH
Confidence 99998886
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-25 Score=252.10 Aligned_cols=183 Identities=8% Similarity=0.041 Sum_probs=120.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccc-----hhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSS-----KDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~-----~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 461 (680)
...+.|+.|.+++++. ..|+.++||++..... ........++|.+|+++|+++ .|+||+++++++.+++ +.
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~ 317 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SG 317 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EE
Confidence 4456677776666542 3588899999875421 112234456899999999999 6999999999999887 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
||||||++||+|.++|... ..++.. +|+.||+.||+|+|+. +||||||||+|||+++++.+||+|||+|+..
T Consensus 318 yLVMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEEEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEEEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999999654 356653 5899999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccc--------cccCCCCCCCCCCCCeeehhHHHHHHHhCCCC
Q 005734 542 LPKSKVSDD--------IENSVLPPLADPETNIYSFGILMLEIISGKLP 582 (680)
Q Consensus 542 ~~~~~~~~~--------~~~~~~~~~~s~~sDVySfGvvllElltG~~p 582 (680)
......... .|+.. .+....++|+||.|++++++.++..+
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l-~g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELF-AENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCccccCceechhhccHHHh-CCCCCCcccccccccchhhhccccch
Confidence 543222111 12222 23456678999999988877666544
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=252.65 Aligned_cols=244 Identities=23% Similarity=0.294 Sum_probs=156.9
Q ss_pred hcccCCchHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCCccceeeeCCCcEeEEEcCCCCCccc---CCc---------
Q 005734 22 LQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGT---LAP--------- 89 (680)
Q Consensus 22 ~~~~~~~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c~w~gv~c~~~~l~~L~l~~~~l~g~---~p~--------- 89 (680)
++++.+.+.|++||++||+++. ||. .+++|+ .+.+||.|.||+|+.++|+.|+|+++.+.|. +|+
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~-~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP-DKN-LLPDWS-SNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS-CTT-SSTTCC-TTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred CccccCCHHHHHHHHHHHhhCC-Ccc-cccCCC-CCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 3444556789999999999986 777 899997 3568999999999989999999999999987 554
Q ss_pred --------------ccCCCCCCCEEEccCccCcccCCc--ccCCCCCCCEEEccCCcCCccCcccc-CCCCCCcEEEccC
Q 005734 90 --------------DLGKLSDLRFLVLQKNHFSGVIPK--ELGELTKLELLDLSNNKLSGIIPVEI-SRLPSLKRLLLGN 152 (680)
Q Consensus 90 --------------~~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~L~~ 152 (680)
.++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 566666777777777777766666 67777777777777777776666655 6677777777777
Q ss_pred CcccccCChh---hcCCCCCCeeeccCcccccccCCcccc--------ccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 153 NKFEGSIPLE---LSRFTLLSELQFDDYLTSAEVAGIRSV--------NRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 153 N~l~g~~P~~---l~~l~~L~~L~l~~N~~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|.+++..|.. ++++++|++|++++|.+++.+|..... .+.+......+..+..++.++++.|++++.+|
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHH
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCccc
Confidence 7777666655 566777777777777766655531100 01111112235666677777777777777766
Q ss_pred hhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCCCCCC
Q 005734 222 THLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSGTFPA 274 (680)
Q Consensus 222 ~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~ 274 (680)
..+.+ +.+++ .+.++.|++.+..+......++..++..+..+|.+|.
T Consensus 241 ~~l~~----l~~L~--~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~ 287 (768)
T 3rgz_A 241 RAIST----CTELK--LLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 287 (768)
T ss_dssp HHTTT----CSSCC--EEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCC
T ss_pred HHHhc----CCCCC--EEECCCCcccCccCccccCCCCEEECcCCccCCccCH
Confidence 65542 11222 2334455554433322222344455555555555544
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-23 Score=242.59 Aligned_cols=152 Identities=24% Similarity=0.281 Sum_probs=137.7
Q ss_pred chHHHHHHHHHHHhCcCCCCCCCCCCCCCC----CCC--Ccc------------ceeeeC-CCcEeEEEcCCCCCcccCC
Q 005734 28 LNLEGMALLEFRTRVISDPFGVFSNWNKND----STP--CLW------------SGVRCL-NGKVQMLDMKERSLEGTLA 88 (680)
Q Consensus 28 ~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~----~~~--c~w------------~gv~c~-~~~l~~L~l~~~~l~g~~p 88 (680)
...|+.||++||+++. +| +|+.++ .+| |.| .||.|+ .++|+.|+|+++++.|.+|
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 4578999999999984 44 787554 355 999 999998 5899999999999999999
Q ss_pred cccCCCCCCCEEEc-cCccCccc---------------------------------------------------------
Q 005734 89 PDLGKLSDLRFLVL-QKNHFSGV--------------------------------------------------------- 110 (680)
Q Consensus 89 ~~~~~l~~L~~L~L-~~N~l~g~--------------------------------------------------------- 110 (680)
+++++|++|++|+| ++|.++|.
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 77766555
Q ss_pred -------------------CCcccCCCCCCCEEEccCCcCCc-----------------cCccccC--CCCCCcEEEccC
Q 005734 111 -------------------IPKELGELTKLELLDLSNNKLSG-----------------IIPVEIS--RLPSLKRLLLGN 152 (680)
Q Consensus 111 -------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~L~~ 152 (680)
+|..++++++|++|+|++|+|+| .+|..++ ++++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 88899999999999999999998 4999988 999999999999
Q ss_pred CcccccCChhhcCCCCCCeeeccCcc-ccc-ccCC
Q 005734 153 NKFEGSIPLELSRFTLLSELQFDDYL-TSA-EVAG 185 (680)
Q Consensus 153 N~l~g~~P~~l~~l~~L~~L~l~~N~-~~g-~~p~ 185 (680)
|.+.|.+|..++++++|+.|+|++|. ++| .+|.
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~ 535 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKA 535 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHH
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchH
Confidence 99999999999999999999999998 998 7876
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-23 Score=235.96 Aligned_cols=194 Identities=17% Similarity=0.208 Sum_probs=164.0
Q ss_pred hHHHHHHHHHHHhCcCCCCCC-------CCCCCCCCCCCCcc---ceeeeC-CCcEeEEEcCCCCCcccCCcccCCCCCC
Q 005734 29 NLEGMALLEFRTRVISDPFGV-------FSNWNKNDSTPCLW---SGVRCL-NGKVQMLDMKERSLEGTLAPDLGKLSDL 97 (680)
Q Consensus 29 ~~~~~~ll~~~~~~~~~~~~~-------l~~W~~~~~~~c~w---~gv~c~-~~~l~~L~l~~~~l~g~~p~~~~~l~~L 97 (680)
..|+.||.+++.++.++.+.. ..+|+. +.+||.| .||+|+ .++|+.|+|+++++.|.+|+++++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 368899999999986554442 338985 4689999 999996 5799999999999999999999999999
Q ss_pred CEEEccCc------------------------------------------------------------------------
Q 005734 98 RFLVLQKN------------------------------------------------------------------------ 105 (680)
Q Consensus 98 ~~L~L~~N------------------------------------------------------------------------ 105 (680)
++|+|++|
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 99999988
Q ss_pred ------cCcccCCcccCCCCCCCEEEccCCcCCcc-----------------CccccC--CCCCCcEEEccCCcccccCC
Q 005734 106 ------HFSGVIPKELGELTKLELLDLSNNKLSGI-----------------IPVEIS--RLPSLKRLLLGNNKFEGSIP 160 (680)
Q Consensus 106 ------~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~g~~P 160 (680)
+|+| +|..++++++|++|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 4456 899999999999999999999986 999999 99999999999999999999
Q ss_pred hhhcCCCCCCeeeccCcc-ccc-ccCCcccc----------------ccccCCccc--ccCCCCCCcccCCCCCCCCCCc
Q 005734 161 LELSRFTLLSELQFDDYL-TSA-EVAGIRSV----------------NRKFGQYGF--KIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 161 ~~l~~l~~L~~L~l~~N~-~~g-~~p~~~~~----------------~~~~~~~~~--~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
..++++++|++|++++|. ++| .+|..... .+.+..++. .+..+..++.++++.|+++|.+
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~i 346 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKL 346 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEEC
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccch
Confidence 999999999999999998 998 77753211 122333344 5777888888999999998888
Q ss_pred chhhh
Q 005734 221 ETHLV 225 (680)
Q Consensus 221 ~~~~~ 225 (680)
| .+.
T Consensus 347 p-~~~ 350 (636)
T 4eco_A 347 P-AFG 350 (636)
T ss_dssp C-CCE
T ss_pred h-hhC
Confidence 7 544
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-23 Score=231.08 Aligned_cols=179 Identities=8% Similarity=0.111 Sum_probs=132.5
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh---hHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD---WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
.++||+|+||.||+|+. .+..+++|+...+.... ......+.|.+|++++++++||||+++..++...+ ..++|
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lV 417 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIM 417 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEE
Confidence 37899999999999955 46788998765443221 11223567999999999999999997777777666 56999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.+++.. +.+|+.|+++||+|||+. +|+||||||+|||+++ .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999964 568999999999999998 9999999999999999 9999999999987542
Q ss_pred CCcc----------cccccCCCCC-------CCCCCCCeeehhHHHHHHHhCCCCCC
Q 005734 545 SKVS----------DDIENSVLPP-------LADPETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 545 ~~~~----------~~~~~~~~~~-------~~s~~sDVySfGvvllElltG~~p~~ 584 (680)
.... ...+.+..|+ .++..+|+||..+-.+|-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1111 0112222222 23556789999888888888877764
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.7e-23 Score=215.58 Aligned_cols=198 Identities=16% Similarity=0.159 Sum_probs=156.5
Q ss_pred ccCCchHHHHHHHHHHHhCcCCCCCCCCCCC---CCCCCCCccceeeeC----------CCcEeEEEcCCCCCcccCCcc
Q 005734 24 GCWSLNLEGMALLEFRTRVISDPFGVFSNWN---KNDSTPCLWSGVRCL----------NGKVQMLDMKERSLEGTLAPD 90 (680)
Q Consensus 24 ~~~~~~~~~~~ll~~~~~~~~~~~~~l~~W~---~~~~~~c~w~gv~c~----------~~~l~~L~l~~~~l~g~~p~~ 90 (680)
.+....+|+.+|++||..+..++.+.+.+|. ....++|.|.|+.|. ..+|+.|+|++|.++ .+|+.
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 3445678999999999988667777778894 345678999999994 378999999999998 88999
Q ss_pred cCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcC-----
Q 005734 91 LGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSR----- 165 (680)
Q Consensus 91 ~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~----- 165 (680)
++.+++|++|+|++|.|+ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 89999999999999999999999 89999999999999999999999999988765
Q ss_pred ----CCCCCeeeccCcccccccCCccccc----------cccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 166 ----FTLLSELQFDDYLTSAEVAGIRSVN----------RKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 166 ----l~~L~~L~l~~N~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+++|++|++++|.++ .+|...... +.+..++..+..+..++.++++.|++.+.+|..+.
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~ 250 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFG 250 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTT
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhc
Confidence 999999999999998 666521110 11222223344445555555555555555554443
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-20 Score=190.52 Aligned_cols=134 Identities=7% Similarity=0.088 Sum_probs=109.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchh-------------hHHHHHHHHHHHHHHHHcCCCCcccceeeEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKD-------------WLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~-------------~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 455 (680)
+.||+|+||.||+|...+|+.||||.+....... |.......+.+|++++++++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 8999999999999999889999999986432110 11124567999999999999 5 777776654
Q ss_pred CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccc
Q 005734 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEI 535 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DF 535 (680)
+ ..++||||+++|+|.+ +.. .....++.++++||+|||+. +|+||||||+|||++ ++.+||+||
T Consensus 173 ~---~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 173 E---GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp E---TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCC
T ss_pred c---ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 3 4599999999999998 521 12457999999999999998 999999999999999 999999999
Q ss_pred cccccc
Q 005734 536 CFTTIA 541 (680)
Q Consensus 536 Gla~~~ 541 (680)
|+++..
T Consensus 237 G~a~~~ 242 (282)
T 1zar_A 237 PQSVEV 242 (282)
T ss_dssp TTCEET
T ss_pred CCCeEC
Confidence 999764
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-18 Score=204.10 Aligned_cols=115 Identities=36% Similarity=0.508 Sum_probs=90.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+.+.+|..++.+++|++|+|++|.++|.+|..+.++++|++|+|++|+++|.+|..++.+++|++|+|
T Consensus 442 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 521 (768)
T 3rgz_A 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEEC
Confidence 45667777777777777777777777777777777777777777777888888888888888778888888888888888
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++|+++|.+|..++++++|+.|++++|.++|.+|.
T Consensus 522 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred CCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 88888888888888888888888888888887775
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-18 Score=175.04 Aligned_cols=138 Identities=15% Similarity=0.120 Sum_probs=104.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCE--EEEEEeeeccchhh-------------------HHHHHHHHHHHHHHHHcCCCCc
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVE--IAVAATAITSSKDW-------------------LKSQEMAYRKQVDTLSRINHKN 445 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~--vaVK~~~~~~~~~~-------------------~~~~~~~f~~E~~~l~~l~H~n 445 (680)
.+.||+|+||.||+|.. .+|+. ||||+......... .......+.+|++.+.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 47899999999999998 78989 99998654321100 1122346889999999998886
Q ss_pred c--cceeeEEecCCCCceEEEEEecCC-C----ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeeecCC
Q 005734 446 F--VNLIGYCEDDEPFNRMMVFEYAPN-G----TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMH-HELNPPVAHSNL 517 (680)
Q Consensus 446 i--v~l~g~~~~~~~~~~~lV~ey~~~-G----sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH-~~~~~~ivHrDl 517 (680)
+ ...+++ . ..+|||||+.+ | +|.++... .++.....++.+++.||+||| +. +|+||||
T Consensus 132 i~~p~~~~~--~----~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDl 197 (258)
T 1zth_A 132 VSVPQPYTY--M----KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHADL 197 (258)
T ss_dssp CCCCCEEEE--E----TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSC
T ss_pred CCCCeEEEc--C----CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCC
Confidence 5 333332 2 34899999942 4 66665432 234467889999999999999 77 9999999
Q ss_pred CCCCeeecCCCCeEEccccccccc
Q 005734 518 SSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 518 Kp~NILld~~~~~ki~DFGla~~~ 541 (680)
||+|||+++ .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999765
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=164.27 Aligned_cols=150 Identities=23% Similarity=0.286 Sum_probs=131.6
Q ss_pred CCCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 58 STPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 58 ~~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
.+.|.|++|.|.. .+++.|+|++|.+++..|..|..+++|++|+|++|.|++..+..|..+++|++|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 4689999999963 36899999999999988999999999999999999998666677899999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLH 206 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (680)
++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|.+++..+. .+..+..+
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L 161 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG-------------AFDRLSSL 161 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT-------------TTTTCTTC
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH-------------HHhCCCCC
Confidence 999999766667899999999999999999 7999999999999999999999864433 35566778
Q ss_pred cccCCCCCCCCCCcc
Q 005734 207 TNGDHSCANLPGSSE 221 (680)
Q Consensus 207 ~~l~~s~n~l~~~~~ 221 (680)
..++++.|.+....+
T Consensus 162 ~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 162 THAYLFGNPWDCECR 176 (229)
T ss_dssp CEEECTTSCBCTTBG
T ss_pred CEEEeeCCCccCCcc
Confidence 889999999987654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-17 Score=168.37 Aligned_cols=141 Identities=22% Similarity=0.271 Sum_probs=99.1
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.|+|++|.+++..+..+..+++|++|+|++|.|++..|..|..+++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 46777777777777666677777777777777777777666667777777777777777776555666777777777777
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+|.+++..+..+..+++|++|+|++|.+++..+. .|..+..++.++++.|++++..+..+.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 176 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG-------------AFDKLTNLQTLSLSTNQLQSVPHGAFD 176 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHH-------------HcCcCcCCCEEECCCCcCCccCHHHHh
Confidence 7777755555567777777777777777654332 344555666777777777766654443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.4e-17 Score=158.09 Aligned_cols=150 Identities=20% Similarity=0.223 Sum_probs=128.0
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+.|.|++|.|.. .+++.|++++|.+++..+..+..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 5 C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 568999999963 368999999999997766678999999999999999997666778999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHT 207 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 207 (680)
+|++++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+++..+. .+..+..++
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-------------~~~~l~~L~ 151 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG-------------VFDRLTSLQ 151 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCC
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH-------------HhccCCCcc
Confidence 9999976666689999999999999999976666789999999999999999864443 345567788
Q ss_pred ccCCCCCCCCCCcc
Q 005734 208 NGDHSCANLPGSSE 221 (680)
Q Consensus 208 ~l~~s~n~l~~~~~ 221 (680)
.++++.|.+.+..|
T Consensus 152 ~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 152 YIWLHDNPWDCTCP 165 (208)
T ss_dssp EEECCSCCBCCCTT
T ss_pred EEEecCCCeecCCC
Confidence 89999998887654
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.4e-17 Score=160.23 Aligned_cols=150 Identities=16% Similarity=0.152 Sum_probs=131.7
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCc-ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAP-DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
+-|.|+.+.|.. ..++.|+|++|.+++..+. .|..+++|++|+|++|.|++..|..|..+++|++|+|
T Consensus 9 C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 9 CRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 88 (220)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEEC
Confidence 447899999863 2578999999999987664 5789999999999999999888889999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLH 206 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (680)
++|++++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|. .|..+..+
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L 155 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG-------------AFDTLHSL 155 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT-------------TTTTCTTC
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH-------------HhcCCCCC
Confidence 99999988888899999999999999999998899999999999999999999987665 35566778
Q ss_pred cccCCCCCCCCCCcc
Q 005734 207 TNGDHSCANLPGSSE 221 (680)
Q Consensus 207 ~~l~~s~n~l~~~~~ 221 (680)
+.++++.|.+.+..+
T Consensus 156 ~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 156 STLNLLANPFNCNCY 170 (220)
T ss_dssp CEEECCSCCEECSGG
T ss_pred CEEEecCcCCcCCCc
Confidence 889999999987654
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=162.51 Aligned_cols=147 Identities=23% Similarity=0.265 Sum_probs=84.7
Q ss_pred CCCccceeeeC-CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcc
Q 005734 59 TPCLWSGVRCL-NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV 137 (680)
Q Consensus 59 ~~c~w~gv~c~-~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 137 (680)
+.|.|.|+.|. .+.++.+++++++++ .+|..+. +.|+.|+|++|.+++..+..|.++++|++|+|++|+++...+.
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~ 79 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh
Confidence 56788877775 234556666666666 3454433 4566666666666655445666666666666666666633333
Q ss_pred ccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 138 EISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
.+..+++|++|+|++|.+++..+..+..+++|++|++++|.+++..+. .|..+..++.++++.|+++
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~Ls~n~l~ 146 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPR-------------VFDSLTKLTYLSLGYNELQ 146 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCC
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHH-------------HhCcCcCCCEEECCCCcCC
Confidence 445666666666666666654444556666666666666666544332 2333444555555555555
Q ss_pred CCcc
Q 005734 218 GSSE 221 (680)
Q Consensus 218 ~~~~ 221 (680)
+..+
T Consensus 147 ~~~~ 150 (270)
T 2o6q_A 147 SLPK 150 (270)
T ss_dssp CCCT
T ss_pred ccCH
Confidence 4433
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.70 E-value=7.5e-17 Score=159.17 Aligned_cols=147 Identities=18% Similarity=0.175 Sum_probs=128.5
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+.|.|..+.|.. .+++.|+|++|.+++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|+
T Consensus 9 C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 88 (220)
T 2v9t_B 9 CTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY 88 (220)
T ss_dssp SEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECC
T ss_pred CEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECC
Confidence 457899999963 368999999999998877789999999999999999999889999999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHT 207 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 207 (680)
+|++++..+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..+. .|..+..++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~ 155 (220)
T 2v9t_B 89 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG-------------TFSPLRAIQ 155 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCC
T ss_pred CCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH-------------HHhCCCCCC
Confidence 9999955555578999999999999999988889999999999999999999876554 345566778
Q ss_pred ccCCCCCCCCC
Q 005734 208 NGDHSCANLPG 218 (680)
Q Consensus 208 ~l~~s~n~l~~ 218 (680)
.++++.|.+..
T Consensus 156 ~L~L~~N~~~c 166 (220)
T 2v9t_B 156 TMHLAQNPFIC 166 (220)
T ss_dssp EEECCSSCEEC
T ss_pred EEEeCCCCcCC
Confidence 89999998865
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-17 Score=173.79 Aligned_cols=199 Identities=21% Similarity=0.297 Sum_probs=155.9
Q ss_pred CCcEeEEEcCC-CCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKE-RSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~-~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++.|+|++ |.+.+.+|..++.+++|++|+|++|.+++.+|..+.++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 75 l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (313)
T 1ogq_A 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154 (313)
T ss_dssp CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE
T ss_pred CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE
Confidence 35799999995 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCcccccCChhhcCCC-CCCeeeccCcccccccCCcccccc---------cc-CCcccccCCCCCCcccCCCCCCCC
Q 005734 149 LLGNNKFEGSIPLELSRFT-LLSELQFDDYLTSAEVAGIRSVNR---------KF-GQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~-~L~~L~l~~N~~~g~~p~~~~~~~---------~~-~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
+|++|.++|.+|..++.++ +|++|++++|.+++.+|....... .+ +..+..+..+..++.++++.|+++
T Consensus 155 ~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 234 (313)
T 1ogq_A 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234 (313)
T ss_dssp ECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC
T ss_pred ECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCcee
Confidence 9999999999999999998 999999999999998886432211 11 112245667777888888888888
Q ss_pred CCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCC-CC-CCCccccccCCCCCCCCCCCC
Q 005734 218 GSSETHLVQHSQNLINVARRKLLEQSSNLAAEPAT-VG-SSSDQVIALPTSRSSGTFPAI 275 (680)
Q Consensus 218 ~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~-~~-~~~~~~~~~~~~~~~g~~p~~ 275 (680)
+.+|. +. .+.++. .+.++.|++.+..+. .. ...++..++..|..+|.+|..
T Consensus 235 ~~~~~-~~----~l~~L~--~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 235 FDLGK-VG----LSKNLN--GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp CBGGG-CC----CCTTCC--EEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred eecCc-cc----ccCCCC--EEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 76665 22 112222 344566777643322 21 123566777788788877764
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=8.6e-16 Score=156.95 Aligned_cols=182 Identities=16% Similarity=0.113 Sum_probs=142.9
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..+..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36899999999999887778999999999999999999887889999999999999999999888889999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQ 229 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~ 229 (680)
++|.+++..+..++.+++|++|++++|.+++ .+|. .+..+..++.++++.|++++..+..+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~---- 170 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-------------YFSNLTNLEHLDLSSNKIQSIYCTDLR---- 170 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG-------------GGGGCTTCCEEECCSSCCCEECGGGGH----
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCch-------------hhccCCCCCEEECCCCCCCcCCHHHhh----
Confidence 9999998767689999999999999999876 3454 455667888899999999987766554
Q ss_pred hhhhHHhh--hhhhcccccCCCCCCC-CCCCccccccCCCCCC
Q 005734 230 NLINVARR--KLLEQSSNLAAEPATV-GSSSDQVIALPTSRSS 269 (680)
Q Consensus 230 ~~~~l~~~--~l~~~~n~l~~~~~~~-~~~~~~~~~~~~~~~~ 269 (680)
.+.++..+ .+.++.|++...+... ....++..++..|..+
T Consensus 171 ~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~ 213 (276)
T 2z62_A 171 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLK 213 (276)
T ss_dssp HHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCS
T ss_pred hhhhccccceeeecCCCcccccCccccCCCcccEEECCCCcee
Confidence 22233322 3445666665443221 1113445556666544
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.65 E-value=4.2e-16 Score=150.35 Aligned_cols=132 Identities=21% Similarity=0.273 Sum_probs=94.8
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCc-ccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCC
Q 005734 75 MLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPK-ELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153 (680)
Q Consensus 75 ~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 153 (680)
.+++++|+++ .+|..+.. +|++|+|++|.|++..|. .+..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3455566663 55655543 778888888888765554 3777888888888888888777777888888888888888
Q ss_pred cccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 154 KFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 154 ~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
++++..|..|.++++|++|+|++|.+++.+|. .+..+..+..++++.|++.+..+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPG-------------SFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTT-------------SSTTCTTCCEEECTTCCBCCSGGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHH-------------HhhcCCCCCEEEeCCCCccCcCcc
Confidence 88877777777788888888888887776664 344556667777888888776654
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.65 E-value=4.8e-16 Score=158.61 Aligned_cols=141 Identities=19% Similarity=0.213 Sum_probs=116.3
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+.+. +.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46789999999998863 4788999999999999999987777788999999999999999977777788999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
|++|.+++..|..++.+++|+.|++++|.+++..+. .+..+..++.++++.|++++..+..+.
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 202 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG-------------VFDKLTQLKDLRLYQNQLKSVPDGVFD 202 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHH-------------HhcCCccCCEEECCCCcCCccCHHHHh
Confidence 999999976666788999999999999988865443 345566778888888888887765544
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.8e-16 Score=183.65 Aligned_cols=201 Identities=15% Similarity=0.092 Sum_probs=128.3
Q ss_pred chHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCCccceeeeCCCcEeEEEcCC------------------CCCcc----
Q 005734 28 LNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKE------------------RSLEG---- 85 (680)
Q Consensus 28 ~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c~w~gv~c~~~~l~~L~l~~------------------~~l~g---- 85 (680)
.+.++.+|+++........+..-..|.......+.|.++.+..++++.|+|.. |.+.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 45667889988876643334444567554445678988877665555555543 33332
Q ss_pred -----cCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCC
Q 005734 86 -----TLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP 160 (680)
Q Consensus 86 -----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P 160 (680)
..+..+..++.|+.|+|++|.|. .+|..+..+++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 23556788999999999999998 78888889999999999999999 89999999999999999999999 889
Q ss_pred hhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhhHHhhhhh
Q 005734 161 LELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLL 240 (680)
Q Consensus 161 ~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~l~~~~l~ 240 (680)
..|++|++|++|+|++|.++ .+|. .|+.+.++..|+++.|+|++.+|..+... .+..+.+.
T Consensus 287 ~~~~~l~~L~~L~L~~N~l~-~lp~-------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~~-----~~~~~~l~ 347 (727)
T 4b8c_D 287 AELGSCFQLKYFYFFDNMVT-TLPW-------------EFGNLCNLQFLGVEGNPLEKQFLKILTEK-----SVTGLIFY 347 (727)
T ss_dssp SSGGGGTTCSEEECCSSCCC-CCCS-------------STTSCTTCCCEECTTSCCCSHHHHHHHHH-----HHHHHHHH
T ss_pred hhhcCCCCCCEEECCCCCCC-ccCh-------------hhhcCCCccEEeCCCCccCCCChHHHhhc-----chhhhHHh
Confidence 99999999999999999886 5665 46677888999999999999998877622 12222344
Q ss_pred hcccccCCCC
Q 005734 241 EQSSNLAAEP 250 (680)
Q Consensus 241 ~~~n~l~~~~ 250 (680)
+..|++.+..
T Consensus 348 l~~N~l~~~~ 357 (727)
T 4b8c_D 348 LRDNRPEIPL 357 (727)
T ss_dssp HHHCCCCCCC
T ss_pred hccCcccCcC
Confidence 5667766544
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.63 E-value=5e-16 Score=162.97 Aligned_cols=152 Identities=16% Similarity=0.194 Sum_probs=117.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCC---------
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISR--------- 141 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--------- 141 (680)
.+++.|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 57888888888888 78888888888888888888888 77888888888888888888888888877654
Q ss_pred CCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCcccc----------ccccCCcccccCCCCCCcccCC
Q 005734 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV----------NRKFGQYGFKIGEDSLHTNGDH 211 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~----------~~~~~~~~~~~~~~~~~~~l~~ 211 (680)
+++|++|+|++|.++ .+|..++++++|++|++++|.+++..+..... +...+..+..+..+..++.+++
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 888888888888888 78888888888888888888887643322111 1112223346777888899999
Q ss_pred CCCCCCCCcchhhh
Q 005734 212 SCANLPGSSETHLV 225 (680)
Q Consensus 212 s~n~l~~~~~~~~~ 225 (680)
+.|++.+.+|..+.
T Consensus 261 ~~n~~~~~~p~~~~ 274 (328)
T 4fcg_A 261 KDCSNLLTLPLDIH 274 (328)
T ss_dssp TTCTTCCBCCTTGG
T ss_pred CCCCchhhcchhhh
Confidence 99999999987765
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=162.00 Aligned_cols=157 Identities=22% Similarity=0.189 Sum_probs=131.9
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccC-CCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLG-KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
+.|.+..+.|.. ..++.|+|++|.+++..+..+. .+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 16 C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 16 CLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp CEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 347888899953 3578999999999988777787 9999999999999999888889999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLH 206 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (680)
++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..+.. + ..+..+..+
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~------~----~~~~~l~~L 165 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVEL------I----KDGNKLPKL 165 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGG------T----C----CTTC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHH------h----cCcccCCcC
Confidence 999999777778999999999999999999888999999999999999999998632221 0 112456778
Q ss_pred cccCCCCCCCCCCcchhhh
Q 005734 207 TNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 207 ~~l~~s~n~l~~~~~~~~~ 225 (680)
..++++.|+|++..+..+.
T Consensus 166 ~~L~L~~N~l~~l~~~~~~ 184 (361)
T 2xot_A 166 MLLDLSSNKLKKLPLTDLQ 184 (361)
T ss_dssp CEEECCSSCCCCCCHHHHH
T ss_pred CEEECCCCCCCccCHHHhh
Confidence 8899999999987765554
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-15 Score=174.72 Aligned_cols=142 Identities=17% Similarity=0.158 Sum_probs=125.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|||++|.|++..+.+|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|.+|++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999887889999999999999999999888889999999999999999999777778999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++|++++..+..|+++++|++|++++|.+++ .+|. .+..+..++.++++.|++++..+..+.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-------------YFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG-------------GGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCch-------------hhccchhhhhhcccCcccccccccccc
Confidence 9999997666779999999999999999875 3343 345567788899999999988877665
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5e-16 Score=170.46 Aligned_cols=154 Identities=20% Similarity=0.253 Sum_probs=134.1
Q ss_pred CCccce--eeeCC----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccC-CcccCCCCCCCEEEc
Q 005734 60 PCLWSG--VRCLN----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI-PKELGELTKLELLDL 126 (680)
Q Consensus 60 ~c~w~g--v~c~~----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~L 126 (680)
.|.|.+ |.|.. .++++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 355444 88863 46899999999999988999999999999999999998766 567999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChh--hcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLE--LSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDS 204 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~--l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~ 204 (680)
++|++++..|..++++++|++|+|++|.+++.+|.. ++.+++|++|++++|.+++..|.. .+..+.
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------------~~~~l~ 154 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS------------FFLNMR 154 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG------------GGGGCT
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc------------ccCCCC
Confidence 999999888999999999999999999999877765 999999999999999999876651 245667
Q ss_pred CCcccCCCCCCCCCCcchhhh
Q 005734 205 LHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 205 ~~~~l~~s~n~l~~~~~~~~~ 225 (680)
.++.++++.|++++..+..+.
T Consensus 155 ~L~~L~L~~n~l~~~~~~~l~ 175 (455)
T 3v47_A 155 RFHVLDLTFNKVKSICEEDLL 175 (455)
T ss_dssp TCCEEECTTCCBSCCCTTTSG
T ss_pred cccEEeCCCCcccccChhhhh
Confidence 788899999999998887665
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-15 Score=158.20 Aligned_cols=207 Identities=20% Similarity=0.122 Sum_probs=144.6
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcc--cCCcccCCCCCCCEEE
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSG--VIPKELGELTKLELLD 125 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ 125 (680)
+.|.|+++.|.. .+++.|+|++|.++...+..+..+++|++|+|++|.++. ..|..+..+++|++|+
T Consensus 5 C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 558999999963 368999999999985444457999999999999999983 3467777899999999
Q ss_pred ccCCcCCccCccccCCCCCCcEEEccCCcccccCC-hhhcCCCCCCeeeccCcccccccCCccccc----------cccC
Q 005734 126 LSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP-LELSRFTLLSELQFDDYLTSAEVAGIRSVN----------RKFG 194 (680)
Q Consensus 126 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P-~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~----------~~~~ 194 (680)
|++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++..|...... +.+.
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 9999998 578888899999999999999986544 578889999999999998887666522111 1111
Q ss_pred C--cccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCC-CC-CCCccccccCCCCCCC
Q 005734 195 Q--YGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPAT-VG-SSSDQVIALPTSRSSG 270 (680)
Q Consensus 195 ~--~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~-~~-~~~~~~~~~~~~~~~g 270 (680)
. .+..+..+..++.++++.|++++..|..+. .+.++. .+.+++|++...+.. .. ...++..+++.|..++
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~----~l~~L~--~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN----SLSSLQ--VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTT----TCTTCC--EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhc----CCCCCC--EEECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 1 223556667778888888888876665554 122222 334456666544321 11 1234455566665554
Q ss_pred CC
Q 005734 271 TF 272 (680)
Q Consensus 271 ~~ 272 (680)
..
T Consensus 238 ~~ 239 (306)
T 2z66_A 238 SK 239 (306)
T ss_dssp CS
T ss_pred cC
Confidence 43
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-15 Score=154.46 Aligned_cols=142 Identities=19% Similarity=0.153 Sum_probs=120.3
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCc-CCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK-LSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+..+++|++|+|++|. ++...|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 478999999999998777889999999999999999998889999999999999999997 7766688899999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+++|.+++..|..+.++++|++|++++|.+++..+. .+..+..++.++++.|++++..+..+.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~ 174 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD-------------TFRDLGNLTHLFLHGNRISSVPERAFR 174 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh-------------HhccCCCccEEECCCCcccccCHHHhc
Confidence 999999988788899999999999999998864443 345556677778888877765544343
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-15 Score=143.23 Aligned_cols=137 Identities=20% Similarity=0.211 Sum_probs=87.6
Q ss_pred CCCccceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccc
Q 005734 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE 138 (680)
Q Consensus 59 ~~c~w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 138 (680)
+.|.|+++.|...+ ++ .+|..+ .++|+.|++++|.+++..+..+..+++|++|+|++|++++..+..
T Consensus 5 C~C~~~~l~~~~~~----------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 5 CSCSGTEIRCNSKG----------LT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp CEEETTEEECCSSC----------CS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred CEeCCCEEEecCCC----------Cc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 45789888886432 32 233322 256777777777777555555677777777777777777544455
Q ss_pred cCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 139 ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 139 ~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
+..+++|+.|+|++|.+++..+..+..+++|++|++++|.+++..+. .+..+..++.++++.|++.+
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-------------~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDG-------------IFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCCEEECCSSCBCC
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHH-------------HhcCCcccCEEEecCCCeec
Confidence 66777777777777777755555567777777777777777643222 23445556667777777777
Q ss_pred Ccc
Q 005734 219 SSE 221 (680)
Q Consensus 219 ~~~ 221 (680)
..|
T Consensus 139 ~~~ 141 (177)
T 2o6r_A 139 SCP 141 (177)
T ss_dssp CHH
T ss_pred cCc
Confidence 665
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=6.1e-16 Score=174.02 Aligned_cols=153 Identities=24% Similarity=0.273 Sum_probs=132.7
Q ss_pred CCccceeeeCC-------------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 60 PCLWSGVRCLN-------------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 60 ~c~w~gv~c~~-------------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
.|.|.|+ |+. .+++.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5888888 752 37999999999999988899999999999999999999988899999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccc-cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEG-SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSL 205 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 205 (680)
++|++++..|..++++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+|. ..+..+..
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~------------~~~~~l~~ 149 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR------------IDFAGLTS 149 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT------------TTTTTCCE
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH------------hhhhcccc
Confidence 9999998777779999999999999999986 4678899999999999999997777664 13455666
Q ss_pred CcccCCCCCCCCCCcchhhh
Q 005734 206 HTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 206 ~~~l~~s~n~l~~~~~~~~~ 225 (680)
++.++++.|++++.+|..+.
T Consensus 150 L~~L~L~~n~l~~~~~~~l~ 169 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLK 169 (549)
T ss_dssp EEEEEEEETTCCEECTTTTT
T ss_pred cCeeeccCCcccccChhhhh
Confidence 77788888888877776655
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=172.02 Aligned_cols=142 Identities=17% Similarity=0.204 Sum_probs=129.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 47899999999999888889999999999999999999988999999999999999999999888999999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++|.+++..|..++++++|++|++++|.+++ .+|. .+..+.+++.++++.|++++..+..+.
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~-------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPA-------------YFSNLTNLVHVDLSYNYIQTITVNDLQ 174 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCG-------------GGGTCTTCCEEECCSSCCCEECTTTTH
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechH-------------hHhhcCCCCEEEccCCcceecChhhhh
Confidence 9999998777889999999999999999975 5565 466778888999999999987776655
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.8e-15 Score=162.91 Aligned_cols=162 Identities=20% Similarity=0.233 Sum_probs=127.8
Q ss_pred cceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcC
Q 005734 63 WSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131 (680)
Q Consensus 63 w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 131 (680)
|..|.|.. ..++.|+|++|.+.+..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 67888853 4689999999999998889999999999999999999988889999999999999999999
Q ss_pred CccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCcc-cc----------ccccCCccccc
Q 005734 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIR-SV----------NRKFGQYGFKI 200 (680)
Q Consensus 132 ~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~-~~----------~~~~~~~~~~~ 200 (680)
++..+..+..+++|++|+|++|.++...+..|.++++|+.|++++|...+.++... .. .+.+..+ ..+
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~ 203 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNL 203 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-ccc
Confidence 96666679999999999999999997767789999999999999976655555411 00 0111111 234
Q ss_pred CCCCCCcccCCCCCCCCCCcchhhh
Q 005734 201 GEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 201 ~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
..+..++.++++.|++++..|..+.
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~ 228 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQ 228 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTT
T ss_pred CCCcccCEEECCCCccCccChhhhc
Confidence 5555666677777777766655544
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.61 E-value=4.7e-15 Score=149.35 Aligned_cols=139 Identities=20% Similarity=0.183 Sum_probs=122.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..+..+++|++|+|++|.|++..|..|..+++|++|+|++|++++..+..+..+++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 36899999999999998888899999999999999999987778899999999999999999976666689999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|++|++++..|..++.+++|++|+|++|.+++..+. .+..+..++.++++.|++.+...
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG-------------AFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCCEEECCSCCBCTTST
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH-------------HHhCCCCCCEEEeeCCceeCCcc
Confidence 999999976666899999999999999999865553 35566778889999999987643
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.60 E-value=4.6e-15 Score=143.02 Aligned_cols=127 Identities=21% Similarity=0.292 Sum_probs=116.2
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCc-ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAP-DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDL 126 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 126 (680)
+.|.|+.+.|.. .+++.|+|++|.+++..+. .++.+++|++|+|++|.|++..|..|.++++|++|+|
T Consensus 6 C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 85 (192)
T 1w8a_A 6 CHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp SEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEEC
Confidence 458899999963 3789999999999877665 4899999999999999999999999999999999999
Q ss_pred cCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 127 SNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 127 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++|++++..|..|..+++|++|+|++|++++.+|..+..+++|++|++++|.+++..+-
T Consensus 86 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 99999998888899999999999999999999999999999999999999999987653
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.60 E-value=9e-16 Score=179.79 Aligned_cols=183 Identities=16% Similarity=0.208 Sum_probs=143.4
Q ss_pred CCcEeEEEcCCCCCcc-----------------cCCcccC--CCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCc
Q 005734 70 NGKVQMLDMKERSLEG-----------------TLAPDLG--KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g-----------------~~p~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 130 (680)
..+++.|+|++|.++| .+|+.++ ++++|++|+|++|.+.|.+|..++++++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4689999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred -CCc-cCccccCCCC-------CCcEEEccCCcccccCCh--hhcCCCCCCeeeccCcccccccCCccccccccCCcccc
Q 005734 131 -LSG-IIPVEISRLP-------SLKRLLLGNNKFEGSIPL--ELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFK 199 (680)
Q Consensus 131 -l~g-~~p~~~~~l~-------~L~~L~L~~N~l~g~~P~--~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~ 199 (680)
++| .+|..++.++ +|+.|+|++|+++ .+|. .++++++|+.|+|++|.++ .+|.
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~-------------- 590 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEA-------------- 590 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCC--------------
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchh--------------
Confidence 999 8998777665 9999999999999 8999 9999999999999999998 6763
Q ss_pred cCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhh-HHhhhhhhcccccCCCCCCCCCC---CccccccCCCCCCCCCCCC
Q 005734 200 IGEDSLHTNGDHSCANLPGSSETHLVQHSQNLIN-VARRKLLEQSSNLAAEPATVGSS---SDQVIALPTSRSSGTFPAI 275 (680)
Q Consensus 200 ~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~-l~~~~l~~~~n~l~~~~~~~~~~---~~~~~~~~~~~~~g~~p~~ 275 (680)
+..+..++.++++.|+++ .+|..+.+ +.+ +. .+.++.|++...+...... .++..+++.|..+|.+|..
T Consensus 591 ~~~L~~L~~L~Ls~N~l~-~lp~~l~~----l~~~L~--~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l 663 (876)
T 4ecn_A 591 FGTNVKLTDLKLDYNQIE-EIPEDFCA----FTDQVE--GLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNI 663 (876)
T ss_dssp CCTTSEESEEECCSSCCS-CCCTTSCE----ECTTCC--EEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSC
T ss_pred hcCCCcceEEECcCCccc-cchHHHhh----ccccCC--EEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccc
Confidence 344556677888888887 56655442 111 22 3445566665433222211 1455667777777766543
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.7e-15 Score=164.65 Aligned_cols=151 Identities=19% Similarity=0.166 Sum_probs=129.5
Q ss_pred ccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCc
Q 005734 62 LWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130 (680)
Q Consensus 62 ~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 130 (680)
.|..|.|.. ..++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 367888853 368999999999999888899999999999999999999889999999999999999999
Q ss_pred CCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccC
Q 005734 131 LSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGD 210 (680)
Q Consensus 131 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~ 210 (680)
+++..+..|.++++|++|+|++|.+++..|..+.++++|+.|++++|.+++..|. .|..+..++.++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~ 158 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR-------------AFSGLNSLEQLT 158 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT-------------SSTTCTTCCEEE
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh-------------hccCCCCCCEEE
Confidence 9965556689999999999999999998899999999999999999999876554 345556677777
Q ss_pred CCCCCCCCCcchhhh
Q 005734 211 HSCANLPGSSETHLV 225 (680)
Q Consensus 211 ~s~n~l~~~~~~~~~ 225 (680)
++.|++++..+..+.
T Consensus 159 l~~n~l~~~~~~~l~ 173 (477)
T 2id5_A 159 LEKCNLTSIPTEALS 173 (477)
T ss_dssp EESCCCSSCCHHHHT
T ss_pred CCCCcCcccChhHhc
Confidence 888877766554443
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.59 E-value=8.6e-15 Score=149.28 Aligned_cols=139 Identities=18% Similarity=0.165 Sum_probs=124.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..++.+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 46899999999999988777889999999999999999988788899999999999999999977777789999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
+++|.+++..|..++.+++|++|++++|.+++..|. .+..+..++.++++.|.+.+..|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDG-------------VFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHH-------------HHhCCcCCCEEEccCCCccccCc
Confidence 999999987777789999999999999999976554 35566778889999999988765
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.6e-15 Score=151.66 Aligned_cols=143 Identities=17% Similarity=0.093 Sum_probs=122.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCcc-CcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNH-FSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++.|+|++|.+++..|..+..+++|++|+|++|. +....|..+..+++|++|+|++|.+++..|..+..+++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3589999999999998888899999999999999997 876668899999999999999999998888889999999999
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++++|.+++..+..++.+++|++|++++|.+++..+. .+..+..++.++++.|++++..|..+.
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~ 198 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER-------------AFRGLHSLDRLLLHQNRVAHVHPHAFR 198 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT-------------TTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHH-------------HhcCccccCEEECCCCcccccCHhHcc
Confidence 9999999976667799999999999999998854433 345566677788888888877666554
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.5e-16 Score=160.07 Aligned_cols=108 Identities=21% Similarity=0.275 Sum_probs=55.9
Q ss_pred EeEEEcCCCCC-cccCCcccC-------CCCCCCEEEccCccCcccCCccc--CCCCCCCEEEccCCcCCccCccccCCC
Q 005734 73 VQMLDMKERSL-EGTLAPDLG-------KLSDLRFLVLQKNHFSGVIPKEL--GELTKLELLDLSNNKLSGIIPVEISRL 142 (680)
Q Consensus 73 l~~L~l~~~~l-~g~~p~~~~-------~l~~L~~L~L~~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~~l 142 (680)
++.|+|++|.+ .+.+|..+. .+++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44555555555 233444333 45555555555555555555544 5555555555555555543 4444444
Q ss_pred -----CCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 143 -----PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 143 -----~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
++|++|+|++|++++..|..++++++|++|++++|.+.+
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 187 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG 187 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCc
Confidence 555555555555554444555555555555555555444
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.59 E-value=8.5e-15 Score=160.67 Aligned_cols=162 Identities=19% Similarity=0.192 Sum_probs=128.5
Q ss_pred cceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcC
Q 005734 63 WSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131 (680)
Q Consensus 63 w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 131 (680)
|..|.|.. .+++.|+|++|++++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 57888853 3689999999999999899999999999999999999998889999999999999999999
Q ss_pred CccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCcc-cc----------ccccCCccccc
Q 005734 132 SGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIR-SV----------NRKFGQYGFKI 200 (680)
Q Consensus 132 ~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~-~~----------~~~~~~~~~~~ 200 (680)
++..+..+..+++|++|+|++|.++...+..|.++++|+.|++++|...+.++... .. .+.+... ..+
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~ 214 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNL 214 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccc
Confidence 97666779999999999999999997666689999999999999976655555411 00 0111111 234
Q ss_pred CCCCCCcccCCCCCCCCCCcchhhh
Q 005734 201 GEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 201 ~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
..+..++.++++.|++++..|..+.
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~ 239 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFH 239 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGT
T ss_pred cccccccEEECcCCcCcccCccccc
Confidence 4555666777777777766665554
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.1e-14 Score=150.84 Aligned_cols=118 Identities=24% Similarity=0.323 Sum_probs=106.8
Q ss_pred CCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccC
Q 005734 60 PCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128 (680)
Q Consensus 60 ~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 128 (680)
.|.|+.+.|.. .+++.|+|++|.+.+..|..+..+++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 47899999962 3689999999999988888999999999999999999998899999999999999999
Q ss_pred CcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 129 NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 129 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
|+++ .+|..+. ++|++|++++|.+++..+..++++++|+.|++++|.++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccc
Confidence 9999 7887765 89999999999999766667999999999999999986
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-15 Score=158.14 Aligned_cols=138 Identities=7% Similarity=0.081 Sum_probs=97.3
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccch-----------------hhHHHHHHHHHHHHHHHHcCCCCccccee
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSK-----------------DWLKSQEMAYRKQVDTLSRINHKNFVNLI 450 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~-----------------~~~~~~~~~f~~E~~~l~~l~H~niv~l~ 450 (680)
...||+|++|.||+|...+|+.||||+.+..... .+.........+|...|.++.+.++....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 4789999999999999999999999986532110 00011112234566667766544432222
Q ss_pred eEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC--
Q 005734 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-- 528 (680)
Q Consensus 451 g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-- 528 (680)
-+... ..+|||||+++++|.++.... ...+++.|++.+|.|||.. +||||||||.|||+++++
T Consensus 180 p~~~~----~~~LVME~i~G~~L~~l~~~~--------~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 180 PIAQS----RHTIVMSLVDALPMRQVSSVP--------DPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp EEEEE----TTEEEEECCSCEEGGGCCCCS--------CHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECS
T ss_pred eeecc----CceEEEEecCCccHhhhcccH--------HHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCc
Confidence 22222 237999999998887765311 2346789999999999998 999999999999998776
Q ss_pred --------CeEEcccccccc
Q 005734 529 --------AAKVAEICFTTI 540 (680)
Q Consensus 529 --------~~ki~DFGla~~ 540 (680)
.+.|+||+-+..
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEE
T ss_pred ccccccccceEEEEeCCccc
Confidence 388999986654
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=6.6e-15 Score=174.20 Aligned_cols=153 Identities=18% Similarity=0.143 Sum_probs=134.1
Q ss_pred CccceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccC-CcccCCCCCCCEEEccCCcCCccCcccc
Q 005734 61 CLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI-PKELGELTKLELLDLSNNKLSGIIPVEI 139 (680)
Q Consensus 61 c~w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 139 (680)
|.|+.|-+...+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 456666665578999999999999999999999999999999999777776 7889999999999999999999899999
Q ss_pred CCCCCCcEEEccCCcccccCChh--hcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 140 SRLPSLKRLLLGNNKFEGSIPLE--LSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 140 ~~l~~L~~L~L~~N~l~g~~P~~--l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
.++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..+. ..|+.+.+++.++++.|+++
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~------------~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH------------PSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCC------------GGGGTCSSCCEEEEESSCCC
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccc------------hhHhhCCCCCEEECCCCcCC
Confidence 99999999999999999888776 99999999999999999876553 24566778888899999998
Q ss_pred CCcchhhh
Q 005734 218 GSSETHLV 225 (680)
Q Consensus 218 ~~~~~~~~ 225 (680)
+..+..+.
T Consensus 162 ~~~~~~l~ 169 (844)
T 3j0a_A 162 LVCEHELE 169 (844)
T ss_dssp CCCSGGGH
T ss_pred eeCHHHcc
Confidence 88877665
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.58 E-value=9.6e-15 Score=150.39 Aligned_cols=138 Identities=22% Similarity=0.196 Sum_probs=111.8
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|+|++|.+++..+..+..+++|++|+|++|.|++. |.. +.+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 4688999999999888788889999999999999999864 333 78899999999999998 78888888999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
++|++++..|..|.++++|++|+|++|.+++..+. .|..+..++.++++.|+|++..+..+
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~l~~~~~ 168 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPG-------------LLTPTPKLEKLSLANNNLTELPAGLL 168 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTT-------------TTTTCTTCCEEECTTSCCSCCCTTTT
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChh-------------hcccccCCCEEECCCCcCCccCHHHh
Confidence 99999976667788999999999999988864443 34556677778888888886555443
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.57 E-value=9.7e-15 Score=143.97 Aligned_cols=143 Identities=19% Similarity=0.216 Sum_probs=122.3
Q ss_pred ceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCC
Q 005734 64 SGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLP 143 (680)
Q Consensus 64 ~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 143 (680)
.+-.|.. +.+++++++++ .+|..+. +.|+.|+|++|.|++..|..|..+++|+.|+|++|++++..|..|..++
T Consensus 7 ~~C~C~~---~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 80 (220)
T 2v9t_B 7 AACTCSN---NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR 80 (220)
T ss_dssp TTSEEET---TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCS
T ss_pred CCCEECC---CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCc
Confidence 3456654 47899999998 5676654 6899999999999988788999999999999999999988899999999
Q ss_pred CCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchh
Q 005734 144 SLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETH 223 (680)
Q Consensus 144 ~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~ 223 (680)
+|++|+|++|.++...+..|..+++|++|+|++|.+++..|. .|..+..++.++++.|++++..+..
T Consensus 81 ~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 81 SLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD-------------AFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-------------TTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHH-------------HcCCCCCCCEEECCCCcCCEECHHH
Confidence 999999999999954445579999999999999999886664 4566778889999999999887765
Q ss_pred hh
Q 005734 224 LV 225 (680)
Q Consensus 224 ~~ 225 (680)
+.
T Consensus 148 ~~ 149 (220)
T 2v9t_B 148 FS 149 (220)
T ss_dssp TT
T ss_pred Hh
Confidence 54
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.2e-15 Score=172.58 Aligned_cols=152 Identities=16% Similarity=0.188 Sum_probs=125.2
Q ss_pred CCcEeEEEcCCCCCccc-----------------CCcccC--CCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCc
Q 005734 70 NGKVQMLDMKERSLEGT-----------------LAPDLG--KLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK 130 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 130 (680)
..+++.|+|++|.++|. +|+.++ ++++|++|+|++|.+.|.+|..++++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 46899999999999996 999999 99999999999999999999999999999999999998
Q ss_pred -CCc-cCccccCCC------CCCcEEEccCCcccccCCh--hhcCCCCCCeeeccCcccccccCCcccc---------cc
Q 005734 131 -LSG-IIPVEISRL------PSLKRLLLGNNKFEGSIPL--ELSRFTLLSELQFDDYLTSAEVAGIRSV---------NR 191 (680)
Q Consensus 131 -l~g-~~p~~~~~l------~~L~~L~L~~N~l~g~~P~--~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~ 191 (680)
++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|++|++++|.++|.+|.+... .+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 999 899999887 99999999999999 8998 9999999999999999999999842111 01
Q ss_pred ccCCcccccCCCCC-CcccCCCCCCCCCCcchh
Q 005734 192 KFGQYGFKIGEDSL-HTNGDHSCANLPGSSETH 223 (680)
Q Consensus 192 ~~~~~~~~~~~~~~-~~~l~~s~n~l~~~~~~~ 223 (680)
.+..++..+..+.. ++.++++.|+++ .+|..
T Consensus 364 ~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 364 QITEIPANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp EEEECCTTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred ccccccHhhhhhcccCcEEEccCCcCc-ccchh
Confidence 11122233444555 666666666665 44443
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-15 Score=159.35 Aligned_cols=154 Identities=24% Similarity=0.274 Sum_probs=122.6
Q ss_pred CCCCccceeeeCC-------------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEE
Q 005734 58 STPCLWSGVRCLN-------------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELL 124 (680)
Q Consensus 58 ~~~c~w~gv~c~~-------------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 124 (680)
.++|.|.++ |+. .+++.|++++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 356888887 641 378999999999998777789999999999999999998888899999999999
Q ss_pred EccCCcCCccCccccCCCCCCcEEEccCCcccccCCh--hhcCCCCCCeeeccCcccccccCCccccccccCCcccccCC
Q 005734 125 DLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPL--ELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGE 202 (680)
Q Consensus 125 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~--~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~ 202 (680)
+|++|++++..+..+..+++|++|+|++|.+++ +|. .+.++++|++|++++|...+.++. ..+..
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~------------~~~~~ 172 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQR------------KDFAG 172 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECT------------TTTTT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCH------------HHccC
Confidence 999999996544558999999999999999994 665 789999999999999954333332 13444
Q ss_pred CCCCcccCCCCCCCCCCcchhhh
Q 005734 203 DSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 203 ~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+..++.++++.|++++..|..+.
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~ 195 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLK 195 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTT
T ss_pred CCCCCEEECCCCCcCccCHHHHh
Confidence 55566666777776666555444
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=4.2e-15 Score=169.01 Aligned_cols=113 Identities=13% Similarity=0.139 Sum_probs=67.6
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+++.+++++|.+....+..+..+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 34566666666554433345556666666666666666555566666666666666666665555555666666666666
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+|.+++..+..|+++++|++|+|++|.+++..|
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 164 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 164 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh
Confidence 666664333334666666666666666655444
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=139.89 Aligned_cols=128 Identities=24% Similarity=0.332 Sum_probs=94.8
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCc
Q 005734 75 MLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154 (680)
Q Consensus 75 ~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~ 154 (680)
.+++++|+++ .+|..+. +.|+.|+|++|.|+ .+|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3455556665 4555443 57888888888887 677888888888888888888887666778888888888888888
Q ss_pred ccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 155 FEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 155 l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
+++..|..|..+++|++|+|++|.+++..+. .|..+..+..++++.|.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEG-------------AFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTT-------------TTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChh-------------hhhcCccccEEEeCCCCeecC
Confidence 8877677788888888888888888753332 344556677788888888754
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=6.2e-15 Score=167.89 Aligned_cols=160 Identities=16% Similarity=0.120 Sum_probs=132.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|+|++|.+++..|..|+++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..|..++.+++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47899999999999988999999999999999999999999999999999999999999999989999999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQ 229 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~ 229 (680)
++|.+++..|..++++++|++|++++|.+++ .+|. +..+..++.++++.|++++..+..+.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~--------------~~~l~~L~~L~L~~n~l~~~~~~~~~---- 174 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK--------------GFPTEKLKVLDFQNNAIHYLSKEDMS---- 174 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCT--------------TCCCTTCCEEECCSSCCCEECHHHHH----
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCccc--------------ccCCcccCEEEcccCcccccChhhhh----
Confidence 9999998667889999999999999999987 3343 22256677788888888877666555
Q ss_pred hhhhHHhhhhhhcccccCC
Q 005734 230 NLINVARRKLLEQSSNLAA 248 (680)
Q Consensus 230 ~~~~l~~~~l~~~~n~l~~ 248 (680)
.+.++..+.+..+.|++..
T Consensus 175 ~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 175 SLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TTTTCCSEEEECTTCCCCE
T ss_pred hhcccceeEEecCCCccCc
Confidence 2223332234455555544
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.9e-14 Score=146.47 Aligned_cols=162 Identities=20% Similarity=0.226 Sum_probs=131.2
Q ss_pred CCCCCCCCCCCC--ccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccC
Q 005734 50 FSNWNKNDSTPC--LWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG 116 (680)
Q Consensus 50 l~~W~~~~~~~c--~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 116 (680)
...|.+. .+.| .|..+.|.. ..++.|+|++|.+++..+..|..+++|++|+|++|.++...+..|.
T Consensus 4 ~C~~~~~-~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~ 82 (270)
T 2o6q_A 4 LCKKDGG-VCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFK 82 (270)
T ss_dssp CBGGGTC-SBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTS
T ss_pred cCCCCCC-CCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhc
Confidence 4567543 2334 478888853 3589999999999977777899999999999999999966566678
Q ss_pred CCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCc
Q 005734 117 ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQY 196 (680)
Q Consensus 117 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~ 196 (680)
.+++|++|+|++|++++..+..+..+++|++|+|++|.+++..|..++.+++|++|++++|.+++..+.
T Consensus 83 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~----------- 151 (270)
T 2o6q_A 83 ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG----------- 151 (270)
T ss_dssp SCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----------
T ss_pred CCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh-----------
Confidence 999999999999999976667789999999999999999987778899999999999999998864433
Q ss_pred ccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 197 GFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 197 ~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
.|..+..++.++++.|++++..+..+.
T Consensus 152 --~~~~l~~L~~L~L~~n~l~~~~~~~~~ 178 (270)
T 2o6q_A 152 --VFDKLTSLKELRLYNNQLKRVPEGAFD 178 (270)
T ss_dssp --TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred --HccCCcccceeEecCCcCcEeChhHhc
Confidence 245556677788888888776655443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.5e-15 Score=143.72 Aligned_cols=136 Identities=20% Similarity=0.190 Sum_probs=117.3
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..+..+++|++|+|++|.|++..+..+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 36899999999999976666789999999999999999977677789999999999999999976666789999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
|++|.+++..+..+..+++|+.|++++|.+.+..|. +..++++.|+++|.+|..++
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~--------------------l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG--------------------IRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT--------------------THHHHHHHHHCTTTBBCTTS
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCCC--------------------HHHHHHHHHhCCceeeccCc
Confidence 999999976666689999999999999988876554 34466777888888887665
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=147.59 Aligned_cols=187 Identities=20% Similarity=0.195 Sum_probs=137.6
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+.++++|++|++++|++++..+..+..+++|++|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 36899999999999988778899999999999999999988889999999999999999999977776899999999999
Q ss_pred ccCCcccc-cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCc-ccCCCCCCCCCCcchhhhhh
Q 005734 150 LGNNKFEG-SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHT-NGDHSCANLPGSSETHLVQH 227 (680)
Q Consensus 150 L~~N~l~g-~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~l~~s~n~l~~~~~~~~~~~ 227 (680)
+++|.+++ .+|..++++++|++|++++|.+++..+.... .+..+..+. .++++.|++++..+..+..
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----------~l~~L~~l~l~L~ls~n~l~~~~~~~~~~- 199 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR----------VLHQMPLLNLSLDLSLNPMNFIQPGAFKE- 199 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH----------HHHTCTTCCEEEECCSSCCCEECTTSSCS-
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhh----------hhhhccccceeeecCCCcccccCccccCC-
Confidence 99999986 4799999999999999999999876543211 111111121 4677777777655443331
Q ss_pred hhhhhhHHhhhhhhcccccCCCCCCC-C-CCCccccccCCCCCCCCCC
Q 005734 228 SQNLINVARRKLLEQSSNLAAEPATV-G-SSSDQVIALPTSRSSGTFP 273 (680)
Q Consensus 228 ~~~~~~l~~~~l~~~~n~l~~~~~~~-~-~~~~~~~~~~~~~~~g~~p 273 (680)
.++. .+.++.|++...+... . ...++..++..|..++..|
T Consensus 200 ----~~L~--~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 200 ----IRLK--ELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp ----CCEE--EEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ----Cccc--EEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 0111 3344556665544321 1 1234455666666555543
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.6e-14 Score=141.81 Aligned_cols=143 Identities=19% Similarity=0.193 Sum_probs=120.0
Q ss_pred cceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCC
Q 005734 63 WSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRL 142 (680)
Q Consensus 63 w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 142 (680)
|..-.|.. +.++++++.++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|++++..+..|..+
T Consensus 14 ~~~~~Cs~---~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 87 (229)
T 3e6j_A 14 PSQCSCSG---TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSL 87 (229)
T ss_dssp CTTCEEET---TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEeC---CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccC
Confidence 45567764 46899999887 6676554 899999999999999889999999999999999999985555667999
Q ss_pred CCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 143 ~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
++|++|+|++|++++..+..+..+++|++|+|++|.++ .+|. .+..+..++.++++.|++++..+.
T Consensus 88 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~-------------~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 88 TQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPR-------------GIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCT-------------TGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCc-------------ccccCCCCCEEECCCCcCCccCHH
Confidence 99999999999999766677899999999999999998 5554 345567788899999999987765
Q ss_pred hhh
Q 005734 223 HLV 225 (680)
Q Consensus 223 ~~~ 225 (680)
.+.
T Consensus 154 ~~~ 156 (229)
T 3e6j_A 154 AFD 156 (229)
T ss_dssp TTT
T ss_pred HHh
Confidence 444
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.5e-15 Score=154.58 Aligned_cols=183 Identities=19% Similarity=0.182 Sum_probs=133.4
Q ss_pred CCcEeEEEcCCCCCcccCCccc--CCCCCCCEEEccCccCcccCCcccCCC-----CCCCEEEccCCcCCccCccccCCC
Q 005734 70 NGKVQMLDMKERSLEGTLAPDL--GKLSDLRFLVLQKNHFSGVIPKELGEL-----TKLELLDLSNNKLSGIIPVEISRL 142 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~--~~l~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l 142 (680)
..+++.|+|++|.+++.+|..+ +.+++|++|+|++|.+++. |..++.+ ++|++|+|++|++++..|..++.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 3579999999999999999876 8999999999999999977 8888877 999999999999998888899999
Q ss_pred CCCcEEEccCCccccc--CChhh--cCCCCCCeeeccCccccc--ccCCccccccccCCcccccCCCCCCcccCCCCCCC
Q 005734 143 PSLKRLLLGNNKFEGS--IPLEL--SRFTLLSELQFDDYLTSA--EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANL 216 (680)
Q Consensus 143 ~~L~~L~L~~N~l~g~--~P~~l--~~l~~L~~L~l~~N~~~g--~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l 216 (680)
++|++|+|++|++.|. +|..+ +.+++|++|++++|.+++ .++. ..+..+..++.++++.|++
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~------------~~~~~l~~L~~L~Ls~N~l 240 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCS------------ALAAARVQLQGLDLSHNSL 240 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHH------------HHHHTTCCCSEEECTTSCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHH------------HHHhcCCCCCEEECCCCcC
Confidence 9999999999998876 34455 889999999999999874 2221 1123345667778888888
Q ss_pred CCCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCCC
Q 005734 217 PGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSGT 271 (680)
Q Consensus 217 ~~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g~ 271 (680)
++.+|..... .+.++. .+.+++|++...+.... ..++..+++.|..++.
T Consensus 241 ~~~~~~~~~~---~l~~L~--~L~Ls~N~l~~ip~~~~-~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 241 RDAAGAPSCD---WPSQLN--SLNLSFTGLKQVPKGLP-AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CSSCCCSCCC---CCTTCC--EEECTTSCCSSCCSSCC-SEEEEEECCSSCCCSC
T ss_pred Ccccchhhhh---hcCCCC--EEECCCCccChhhhhcc-CCceEEECCCCCCCCC
Confidence 7766432111 111122 34455666664443332 3345566666666554
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.9e-14 Score=147.83 Aligned_cols=119 Identities=22% Similarity=0.352 Sum_probs=103.1
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+.|.|+.+.|.. ..++.|+|++|.+++..+..|+.+++|++|+|++|.+++..|..+..+++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 347899999962 468999999999998877789999999999999999998889999999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
+|+++ .+|..+. ++|+.|++++|.+++..+..+.++++|+.|++++|.++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 158 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLK 158 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCC
Confidence 99998 6777654 78888888888888766677888888888888888775
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=162.93 Aligned_cols=112 Identities=20% Similarity=0.209 Sum_probs=103.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+|+.|+|++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.+++..+..|+.+++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 47899999999999988889999999999999999999988888999999999999999999555555799999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAE 182 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~ 182 (680)
++|.+++..|..++.+++|++|++++|.+++.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 99999998888999999999999999998864
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-14 Score=166.37 Aligned_cols=141 Identities=18% Similarity=0.147 Sum_probs=120.3
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..+..|+++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47999999999999887778999999999999999999988999999999999999999999544457999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
++|.+++..|..|+++++|++|++++|.+++..|. .+..+.+++.++++.|++++..+..+
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-------------~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG-------------TQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCC-------------SSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCch-------------hhcccccCCEEEccCCcccccCHHHh
Confidence 99999977778899999999999999999887665 23445566667777777766655543
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=2.5e-14 Score=156.87 Aligned_cols=139 Identities=20% Similarity=0.141 Sum_probs=118.8
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.|++++|.+.+.+|..++.+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 57888999999998888888899999999999999999888888999999999999999998877888889999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
++|++++..|..+..+++|++|++++|.+++..+. .+..+..++.+++++|++++..|.
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDG-------------IFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT-------------TTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHh-------------HhccCCcccEEEccCCCcccCCCc
Confidence 99999888888899999999999999988864333 345667778889999999888773
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=150.47 Aligned_cols=142 Identities=17% Similarity=0.143 Sum_probs=117.4
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++.|+|++|.+. .+|..+..+++|++|++++|.+++..+ ..+..+++|++|+|++|.+++..|..+..+++|+.|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 468999999999988 467778899999999999999986554 578899999999999999998888889999999999
Q ss_pred EccCCcccc-cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 149 LLGNNKFEG-SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 149 ~L~~N~l~g-~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++++|.+++ .+|..+..+++|++|++++|.+++..|. .+..+..++.++++.|++++..+..+.
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 220 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT-------------AFNSLSSLQVLNMSHNNFFSLDTFPYK 220 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT-------------TTTTCTTCCEEECTTSCCSBCCSGGGT
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHH-------------HhcCCCCCCEEECCCCccCccChhhcc
Confidence 999999987 5788899999999999999998876554 344556667777888887766554443
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=140.67 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=108.8
Q ss_pred CCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 69 ~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
...+++.|+|++|.+++..+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|++++..|..+..+++|++|
T Consensus 55 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp GCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred cCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 34689999999999998888899999999999999999998888889999999999999999999889999999999999
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+|++|++++..|..|..+++|+.|++++|.+++..+
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999999889999999999999999999987654
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.4e-14 Score=136.16 Aligned_cols=135 Identities=22% Similarity=0.205 Sum_probs=115.0
Q ss_pred CcEeEEEcCCCCCc-ccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLE-GTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|.++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57899999999998 88898889999999999999999975 7899999999999999999988888888899999999
Q ss_pred ccCCcccccCC--hhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIP--LELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P--~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
|++|.+++ +| ..++.+++|++|++++|.+++..+.. ...+..+..++.++++.|.+..
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~----------~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYR----------ESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHH----------HHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHH----------HHHHHhCccCcEecCCCCChhh
Confidence 99999996 44 78999999999999999998654410 0134556677888888887754
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.1e-14 Score=134.05 Aligned_cols=112 Identities=24% Similarity=0.317 Sum_probs=101.3
Q ss_pred CcEeEEEcCCCCCc-ccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLE-GTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47899999999998 88999899999999999999999975 7899999999999999999988998888899999999
Q ss_pred ccCCccccc-CChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGS-IPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~-~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+++|.+++. .|..++.+++|++|++++|.+++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999973 45789999999999999999987544
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-14 Score=162.91 Aligned_cols=199 Identities=20% Similarity=0.242 Sum_probs=132.9
Q ss_pred CCCCCCCCCCCC-----cccee-eeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCE
Q 005734 50 FSNWNKNDSTPC-----LWSGV-RCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLEL 123 (680)
Q Consensus 50 l~~W~~~~~~~c-----~w~gv-~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~ 123 (680)
+.+|.. +..|| .|.|+ .|..++++.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|+.
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 445643 34577 79999 7987899999999999997 787664 78999999999999 678 56899999
Q ss_pred EEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccc-------cccccCCc
Q 005734 124 LDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRS-------VNRKFGQY 196 (680)
Q Consensus 124 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~-------~~~~~~~~ 196 (680)
|+|++|+|++ +|. +.. +|++|+|++|.+++ +|. .+++|+.|++++|.+++ +|.... ..+.+..+
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~l 175 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTFL 175 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCCc
Confidence 9999999996 887 665 99999999999997 787 68899999999999987 554110 01122222
Q ss_pred ccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhh-hhHHh-hhhhhcccccCCCCCCCC-CCCccccccCCCCCCCCCC
Q 005734 197 GFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNL-INVAR-RKLLEQSSNLAAEPATVG-SSSDQVIALPTSRSSGTFP 273 (680)
Q Consensus 197 ~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~-~~l~~-~~l~~~~n~l~~~~~~~~-~~~~~~~~~~~~~~~g~~p 273 (680)
+. |. .++..+++++|+|+ .+|. +.. ++ ..... ..+.+++|++...+.... ...+...++..|.+++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~---~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV---RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC-----------CCEEEECCSSCCCCCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH---hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 22 32 45666777777777 3333 331 11 00000 133455666654443221 1124455566665555443
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.8e-14 Score=168.81 Aligned_cols=111 Identities=21% Similarity=0.240 Sum_probs=98.6
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+.+..|..+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 47889999999999888888899999999999999999888888999999999999999998888888999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
++|.+++..|..+..+++|++|++++|.+++
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 9999987777778889999999999888765
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=7.8e-15 Score=152.59 Aligned_cols=185 Identities=15% Similarity=0.144 Sum_probs=128.6
Q ss_pred cEeEEEcCCCCCcccCCccc--CCCCCCCEEEccCccCcccCC----cccCCCCCCCEEEccCCcCCccCccccCCCCCC
Q 005734 72 KVQMLDMKERSLEGTLAPDL--GKLSDLRFLVLQKNHFSGVIP----KELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~--~~l~~L~~L~L~~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 145 (680)
+++.|++++|.+.+..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 48889999999988888887 888899999999999887665 345578889999999999987777888889999
Q ss_pred cEEEccCCccccc--CC--hhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 146 KRLLLGNNKFEGS--IP--LELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 146 ~~L~L~~N~l~g~--~P--~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
++|+|++|++.+. ++ ..++.+++|++|++++|.++. ++.... ..+..+..++.+++++|++++..|
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~---------~l~~~l~~L~~L~Ls~N~l~~~~p 241 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCA---------ALAAAGVQPHSLDLSHNSLRATVN 241 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHH---------HHHHHTCCCSSEECTTSCCCCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHH---------HHHhcCCCCCEEECCCCCCCccch
Confidence 9999999987653 22 234688889999999988863 121000 012445667788899999988877
Q ss_pred hhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCC
Q 005734 222 THLVQHSQNLINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSG 270 (680)
Q Consensus 222 ~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g 270 (680)
..+.... ...++. .+.+++|++...+.... ..++..+++.|..++
T Consensus 242 ~~~~~~~-~~~~L~--~L~Ls~N~l~~lp~~~~-~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 242 PSAPRCM-WSSALN--SLNLSFAGLEQVPKGLP-AKLRVLDLSSNRLNR 286 (310)
T ss_dssp SCCSSCC-CCTTCC--CEECCSSCCCSCCSCCC-SCCSCEECCSCCCCS
T ss_pred hhHHhcc-CcCcCC--EEECCCCCCCchhhhhc-CCCCEEECCCCcCCC
Confidence 6654211 001222 34456777765443332 345566677776654
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.3e-14 Score=142.99 Aligned_cols=136 Identities=17% Similarity=0.170 Sum_probs=116.6
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCcc-CcccCCcccCCCCCCCEEEccC-CcCCccCccccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNH-FSGVIPKELGELTKLELLDLSN-NKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L 148 (680)
..++.|++++|++++..+..|..+++|++|++++|. +++..+..|.++++|++|+|++ |++++..+..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 579999999999998777789999999999999997 8876677899999999999999 99997667789999999999
Q ss_pred EccCCcccccCChhhcCCCCCC---eeeccCc-ccccccCCccccccccCCcccccCCCCCCc-ccCCCCCCCCCCcch
Q 005734 149 LLGNNKFEGSIPLELSRFTLLS---ELQFDDY-LTSAEVAGIRSVNRKFGQYGFKIGEDSLHT-NGDHSCANLPGSSET 222 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~---~L~l~~N-~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~l~~s~n~l~~~~~~ 222 (680)
++++|.+++ +|. ++.+++|+ +|++++| .+++..+. .|..+..++ .++++.|+++ .+|.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~-------------~~~~l~~L~~~L~l~~n~l~-~i~~ 173 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVN-------------AFQGLCNETLTLKLYNNGFT-SVQG 173 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTT-------------TTTTTBSSEEEEECCSCCCC-EECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcc-------------cccchhcceeEEEcCCCCCc-ccCH
Confidence 999999996 887 88999998 9999999 77654332 355667777 8899999988 4443
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.6e-14 Score=162.69 Aligned_cols=111 Identities=17% Similarity=0.108 Sum_probs=78.6
Q ss_pred CcEeEEEcCCCCCccc--CCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCc-cccCCCCCCcE
Q 005734 71 GKVQMLDMKERSLEGT--LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP-VEISRLPSLKR 147 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~--~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 147 (680)
.+++.|++++|.+++. +|..+..+++|++|++++|.+.+ +|..+..+++|+.|+|++|++++..| ..+..+++|++
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 5677777777777755 36666777777777777777764 55667777777777777777776655 46677777777
Q ss_pred EEccCCcccccCChhhcCCCCCCeeeccCcccccc
Q 005734 148 LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE 182 (680)
Q Consensus 148 L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~ 182 (680)
|++++|.+++.+|..++.+++|++|++++|.+++.
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 463 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDN 463 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCc
Confidence 77777777776777777777777777777777663
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-13 Score=133.61 Aligned_cols=122 Identities=25% Similarity=0.308 Sum_probs=110.3
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+.|.|..+.|.. ..++.|+|++|.++ .+|..|..+++|++|+|++|.|++..|..|.++++|++|+|+
T Consensus 8 C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 8 CTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC
Confidence 457788888853 36899999999998 778899999999999999999998888899999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
+|++++..|..|..+++|++|+|++|.+++..+..|..+++|+.|++++|.+..
T Consensus 87 ~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999998888889999999999999999996555679999999999999998875
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.7e-13 Score=130.02 Aligned_cols=115 Identities=23% Similarity=0.273 Sum_probs=103.2
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+++..+..+..+++|++|+|++|.|++..+..+..+++|++|+|++|++++..+..+..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 57999999999999776677899999999999999999776777899999999999999999777777899999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++|.+++..+..+..+++|++|++++|.+++..|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99999965555578999999999999999987764
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=5.3e-14 Score=151.13 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=114.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+++++.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..+..+++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 46788999999887554445788999999999999999887889999999999999999999877888999999999999
Q ss_pred cCCcccccCChh-hcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 151 GNNKFEGSIPLE-LSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 151 ~~N~l~g~~P~~-l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
++|.++ .+|.. ++++++|++|++++|.+++..|. .+..+..++.++++.|++++..
T Consensus 125 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~ 181 (390)
T 3o6n_A 125 ERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDD-------------TFQATTSLQNLQLSSNRLTHVD 181 (390)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTT-------------TTSSCTTCCEEECCSSCCSBCC
T ss_pred CCCccC-cCCHHHhcCCCCCcEEECCCCccCccChh-------------hccCCCCCCEEECCCCcCCccc
Confidence 999999 45654 68999999999999998875554 3556667778888888887653
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=148.06 Aligned_cols=111 Identities=21% Similarity=0.247 Sum_probs=101.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccc-cCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~ 149 (680)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..++++++|++|+|++|+++ .+|.. +..+++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 57999999999999887889999999999999999999888888999999999999999999 55554 68999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE 182 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~ 182 (680)
+++|.+++..|..++.+++|++|++++|.+++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999987788899999999999999998753
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.48 E-value=8.1e-14 Score=134.78 Aligned_cols=132 Identities=11% Similarity=0.138 Sum_probs=111.2
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+. .+| .+..+++|++|++++|.++ .++.+..+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 46889999999998 556 6889999999999999775 3457899999999999999999888889999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
++|.+++..|..++.+++|++|++++|.+.+.+|. +..+..++.+++++|++++..
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~--------------l~~l~~L~~L~l~~n~i~~~~ 175 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP--------------LKTLPELKSLNIQFDGVHDYR 175 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG--------------GGGCSSCCEEECTTBCCCCCT
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh--------------hcCCCCCCEEECCCCCCcChH
Confidence 99999988888999999999999999984444442 345566788889999888743
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.4e-13 Score=139.88 Aligned_cols=134 Identities=21% Similarity=0.165 Sum_probs=113.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+ .+.+++|++|+|++|.|+ .+|..+..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 4689999999999986533 378999999999999998 7888899999999999999999977678899999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
|++|++++..|..|..+++|+.|+|++|++++..+. .|..+..++.++++.|+++..
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~-------------~~~~l~~L~~L~L~~N~l~~i 187 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAG-------------LLNGLENLDTLLLQENSLYTI 187 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTT-------------TTTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHH-------------HhcCcCCCCEEECCCCcCCcc
Confidence 999999976666788999999999999999853332 345567778888999988843
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.3e-14 Score=158.59 Aligned_cols=171 Identities=20% Similarity=0.149 Sum_probs=113.6
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+|+.|+|++|.+++..|..|+.+++|++|+|++|.|++..| +..+++|++|+|++|.+++. |. .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~~----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-LV----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-EE----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-CC----CCCcCEEECc
Confidence 78999999999998878889999999999999999987665 88899999999999998853 32 2777888888
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhh
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNL 231 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~ 231 (680)
+|.+++..+. .+++|+.|++++|.+++..|. .++.+..+..+++++|++++.+|..+....
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l--- 168 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDL-------------DEGCRSRVQYLDLKLNEIDTVNFAELAASS--- 168 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGB-------------CGGGGSSEEEEECTTSCCCEEEGGGGGGGT---
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCch-------------hhcCCCCCCEEECCCCCCCCcChHHHhhhC---
Confidence 8887765443 356777888888877776554 233445566677777777776665543211
Q ss_pred hhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCC
Q 005734 232 INVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSG 270 (680)
Q Consensus 232 ~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g 270 (680)
.++. .+.+++|++.+.++......+...+++.|.+++
T Consensus 169 ~~L~--~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~ 205 (487)
T 3oja_A 169 DTLE--HLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF 205 (487)
T ss_dssp TTCC--EEECTTSCCCEEECCCCCTTCCEEECCSSCCCE
T ss_pred Cccc--EEecCCCccccccccccCCCCCEEECCCCCCCC
Confidence 1111 233445555443322222234445555555444
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-13 Score=155.59 Aligned_cols=142 Identities=17% Similarity=0.158 Sum_probs=124.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999888888999999999999999999888889999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc-ccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA-EVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++|.+++..+..++++++|++|++++|.+++ .+|. .+..+.+++.++++.|++++..+..+.
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~ 170 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE-------------YFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCG-------------GGGGCTTCCEEECTTSCCCEECGGGGH
T ss_pred cccccccCCCccccccccccEEecCCCccceecChh-------------hhcccCCCCEEeCcCCccceecHHHcc
Confidence 9999996555579999999999999999876 4564 456677888899999999887776555
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-13 Score=156.86 Aligned_cols=144 Identities=19% Similarity=0.147 Sum_probs=116.4
Q ss_pred CcEeEEEcCCCCCcccC--CcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccc-cCCCCCCcE
Q 005734 71 GKVQMLDMKERSLEGTL--APDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLKR 147 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~--p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~ 147 (680)
.+++.|++++|.+.+.. +..+..+++|++|++++|.+.+..|..+..+++|+.|+|++|++++..|.. +..+++|+.
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 429 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKV 429 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCE
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCE
Confidence 57899999999998765 778899999999999999999888999999999999999999998877654 889999999
Q ss_pred EEccCCcccccCChhhcCCCCCCeeeccCcccccc-cCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 148 LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAE-VAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 148 L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
|++++|.+++..|..++.+++|+.|++++|.+++. +|.. ..+..+..++.++++.|++++..|..+.
T Consensus 430 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 497 (606)
T 3t6q_A 430 LNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKT-----------NSLQTLGRLEILVLSFCDLSSIDQHAFT 497 (606)
T ss_dssp EECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSS-----------CGGGGCTTCCEEECTTSCCCEECTTTTT
T ss_pred EECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccc-----------hhhccCCCccEEECCCCccCccChhhhc
Confidence 99999999988888899999999999999998763 2221 1234445556666666666665555443
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=6.1e-14 Score=145.79 Aligned_cols=161 Identities=18% Similarity=0.109 Sum_probs=121.8
Q ss_pred CCcEeEEEcCCCCCcccCC----cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCcc--Cc--cccCC
Q 005734 70 NGKVQMLDMKERSLEGTLA----PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI--IP--VEISR 141 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p----~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p--~~~~~ 141 (680)
..+++.|+|++|.+++..+ ..+..+++|++|+|++|.+.+..|..++.+++|++|+|++|++.+. ++ ..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4578999999999998655 3456799999999999999988889999999999999999998753 32 23478
Q ss_pred CCCCcEEEccCCcccccCCh----hhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 142 LPSLKRLLLGNNKFEGSIPL----ELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~~P~----~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
+++|++|+|++|+++ .+|. .++.+++|++|+|++|.+++.+|... . .+..+..++.+++++|+++
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~------~----~~~~~~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA------P----RCMWSSALNSLNLSFAGLE 264 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC------S----SCCCCTTCCCEECCSSCCC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhH------H----hccCcCcCCEEECCCCCCC
Confidence 999999999999997 3343 25788999999999999998877521 1 1222357788999999998
Q ss_pred CCcchhhhhhhhhhhhHHhhhhhhcccccCCCC
Q 005734 218 GSSETHLVQHSQNLINVARRKLLEQSSNLAAEP 250 (680)
Q Consensus 218 ~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~ 250 (680)
.+|..+. .++. .+.+++|++.+.+
T Consensus 265 -~lp~~~~------~~L~--~L~Ls~N~l~~~~ 288 (310)
T 4glp_A 265 -QVPKGLP------AKLR--VLDLSSNRLNRAP 288 (310)
T ss_dssp -SCCSCCC------SCCS--CEECCSCCCCSCC
T ss_pred -chhhhhc------CCCC--EEECCCCcCCCCc
Confidence 4555442 1122 4556777777643
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-13 Score=144.82 Aligned_cols=142 Identities=19% Similarity=0.155 Sum_probs=120.7
Q ss_pred ceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccC-CCCCCCEEEccCCcCCccCccccCCC
Q 005734 64 SGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG-ELTKLELLDLSNNKLSGIIPVEISRL 142 (680)
Q Consensus 64 ~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l 142 (680)
..-.|.. +.+++++++|+. +|..+. ..++.|+|++|+|++..+..+. .+++|+.|+|++|++++..|..|..+
T Consensus 14 ~~C~C~~---~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l 87 (361)
T 2xot_A 14 ANCLCAS---NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPV 87 (361)
T ss_dssp TTCEEET---TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCEECC---CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCC
Confidence 4556653 478999999984 676554 4689999999999988788887 99999999999999998777889999
Q ss_pred CCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 143 PSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 143 ~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
++|++|+|++|++++..+..|..+++|+.|+|++|.+++..|. .|..+..++.|+++.|+|++..+.
T Consensus 88 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~-------------~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 88 PNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN-------------AFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-------------TTTTCTTCCEEECCSSCCCSCCGG
T ss_pred CCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHH-------------HhCCcccCCEEECCCCcCCeeCHH
Confidence 9999999999999987777899999999999999999876554 466677888999999999986655
Q ss_pred hh
Q 005734 223 HL 224 (680)
Q Consensus 223 ~~ 224 (680)
.+
T Consensus 155 ~~ 156 (361)
T 2xot_A 155 LI 156 (361)
T ss_dssp GT
T ss_pred Hh
Confidence 44
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.46 E-value=3.3e-13 Score=127.19 Aligned_cols=108 Identities=20% Similarity=0.287 Sum_probs=93.8
Q ss_pred eEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCC
Q 005734 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153 (680)
Q Consensus 74 ~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 153 (680)
+.+++++|.++. +|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 356677788774 676653 89999999999999988999999999999999999999766667899999999999999
Q ss_pred cccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 154 KFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 154 ~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
++++..|..|..+++|++|+|++|.++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997666679999999999999999887654
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=152.78 Aligned_cols=112 Identities=21% Similarity=0.254 Sum_probs=74.0
Q ss_pred cEeEEEcCCCCCcccCCccc-----CCCCCCCEEEccCccCcccCCc-c-------------------------cCCCCC
Q 005734 72 KVQMLDMKERSLEGTLAPDL-----GKLSDLRFLVLQKNHFSGVIPK-E-------------------------LGELTK 120 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~-----~~l~~L~~L~L~~N~l~g~~p~-~-------------------------~~~l~~ 120 (680)
+++.|++++|.++|.+|..+ +.++.|+.+++++|.+ .+|. . +..+++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 67777777777777777766 5555555555555554 2331 0 156677
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEccCCcccc--cCChhhcCCCCCCeeeccCcccccccCC
Q 005734 121 LELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEG--SIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 121 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
|++|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..++.+++|++|++++|.+++.+|.
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~ 392 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK 392 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc
Confidence 7777777777776677777777777777777777775 5556677777777777777777665554
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=9.3e-14 Score=147.16 Aligned_cols=115 Identities=22% Similarity=0.237 Sum_probs=102.1
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcc--ccCCCCCCcE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV--EISRLPSLKR 147 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 147 (680)
..+++.|+|++|.+++..|..++.+++|++|+|++|.+++..+..+.++++|++|+|++|+++ .+|. .+..+++|++
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 468999999999999888888999999999999999999655555999999999999999999 4665 7899999999
Q ss_pred EEccCC-cccccCChhhcCCCCCCeeeccCcccccccCC
Q 005734 148 LLLGNN-KFEGSIPLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 148 L~L~~N-~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
|++++| .+.+..|..++++++|+.|++++|.+++..|.
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 192 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHH
Confidence 999999 47766677899999999999999999887665
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-13 Score=154.61 Aligned_cols=93 Identities=18% Similarity=0.209 Sum_probs=53.1
Q ss_pred CCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCc--cCccccCCCCCCcEEEccCCcccccCChh-hcCCCC
Q 005734 92 GKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG--IIPVEISRLPSLKRLLLGNNKFEGSIPLE-LSRFTL 168 (680)
Q Consensus 92 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~P~~-l~~l~~ 168 (680)
..+++|++|++++|.+++.+|..++.+++|+.|+|++|++++ .+|..+..+++|+.|++++|.+++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 445556666666666665555556666666666666666654 22344555666666666666665544443 455556
Q ss_pred CCeeeccCcccccccC
Q 005734 169 LSELQFDDYLTSAEVA 184 (680)
Q Consensus 169 L~~L~l~~N~~~g~~p 184 (680)
|+.|++++|.+++.+|
T Consensus 430 L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CCEEECCSSCCCGGGG
T ss_pred CCEEECCCCCCCcchh
Confidence 6666666666555444
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.45 E-value=3e-13 Score=148.32 Aligned_cols=174 Identities=20% Similarity=0.150 Sum_probs=131.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|++|++++..+..+.++++|+.|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 36899999999999998888999999999999999999977777799999999999999999976666888899999999
Q ss_pred ccCCcccccCCh-hhcCCCCCCeeeccCcccccccCCcccc---------ccccCCc-ccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIPL-ELSRFTLLSELQFDDYLTSAEVAGIRSV---------NRKFGQY-GFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P~-~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~~~~~~-~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
|++|+..+.+|. .+..+++|++|++++|.+++. |..... .+.+... +..|..+..++.++++.|++++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 988544445554 588888999999998888753 432111 1111111 2456777888889999999988
Q ss_pred CcchhhhhhhhhhhhHHhhhhhhcccccCCCC
Q 005734 219 SSETHLVQHSQNLINVARRKLLEQSSNLAAEP 250 (680)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~ 250 (680)
..+..+. .+.++. .+.+++|++...+
T Consensus 257 ~~~~~~~----~l~~L~--~L~L~~N~l~~~~ 282 (452)
T 3zyi_A 257 IERNAFD----GLASLV--ELNLAHNNLSSLP 282 (452)
T ss_dssp ECTTTTT----TCTTCC--EEECCSSCCSCCC
T ss_pred ECHHHhc----CCCCCC--EEECCCCcCCccC
Confidence 7776655 222222 3445667766544
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.6e-13 Score=147.13 Aligned_cols=174 Identities=18% Similarity=0.169 Sum_probs=129.2
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+
T Consensus 87 l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 166 (440)
T 3zyj_A 87 LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLD 166 (440)
T ss_dssp CSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeC
Confidence 36899999999999988888899999999999999999976667899999999999999999976667888899999999
Q ss_pred ccCCcccccCCh-hhcCCCCCCeeeccCcccccccCCcccc---------ccccCCc-ccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIPL-ELSRFTLLSELQFDDYLTSAEVAGIRSV---------NRKFGQY-GFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P~-~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~~~~~~-~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
|++|+..+.+|. .|.++++|++|++++|.++ .+|..... .+.+... ...|..+..++.++++.|++++
T Consensus 167 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp CCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 988554445554 6888888999998888887 34542111 0111111 2456777888889999999988
Q ss_pred CcchhhhhhhhhhhhHHhhhhhhcccccCCCC
Q 005734 219 SSETHLVQHSQNLINVARRKLLEQSSNLAAEP 250 (680)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~ 250 (680)
..+..+. .+.++. .+.+++|++...+
T Consensus 246 ~~~~~~~----~l~~L~--~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 246 IERNAFD----NLQSLV--EINLAHNNLTLLP 271 (440)
T ss_dssp ECTTSST----TCTTCC--EEECTTSCCCCCC
T ss_pred EChhhhc----CCCCCC--EEECCCCCCCccC
Confidence 7776554 222222 3445666666544
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=152.49 Aligned_cols=115 Identities=21% Similarity=0.237 Sum_probs=105.6
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+..+++|+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 46899999999999998899999999999999999999976666789999999999999999998899999999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
|++|.+++..|..|.++++|+.|++++|.+++..+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99999998888899999999999999999886443
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.45 E-value=2e-14 Score=166.63 Aligned_cols=141 Identities=19% Similarity=0.185 Sum_probs=121.6
Q ss_pred CCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 69 ~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
....|+.|+|++|.+. .+|..++.+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|+.|++|++|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 3468999999999998 78888899999999999999999 89999999999999999999999 899999999999999
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+|++|.|+ .+|..|+.+++|++|+|++|.+++.+|........ ....++++.|.+++.+|..+.
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~------------~~~~l~l~~N~l~~~~p~~l~ 362 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV------------TGLIFYLRDNRPEIPLPHERR 362 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH------------HHHHHHHHHCCCCCCCCCC--
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcch------------hhhHHhhccCcccCcCccccc
Confidence 99999998 89999999999999999999999988873221100 011256788999998887665
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.2e-13 Score=131.63 Aligned_cols=131 Identities=19% Similarity=0.145 Sum_probs=110.4
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|++++|.+. .++.+..+++|++|++++|.+++..|..++.+++|++|+|++|++++..|..+..+++|++|+
T Consensus 65 l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 358999999999665 345789999999999999999988899999999999999999999988899999999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
+++|.+.+.+| .+..+++|+.|++++|.+++ ++ .+..+..++.+++++|++.+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~--------------~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR--------------GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT--------------TGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH--------------HhccCCCCCEEEeeCcccCC
Confidence 99998444677 69999999999999999875 22 23455677888999998754
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-13 Score=152.50 Aligned_cols=29 Identities=7% Similarity=-0.019 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHcCCCCcccceeeEEecCC
Q 005734 429 MAYRKQVDTLSRINHKNFVNLIGYCEDDE 457 (680)
Q Consensus 429 ~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 457 (680)
++|..|++++++++|+|+|+++|||....
T Consensus 324 ~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 324 ETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 46999999999999999999999998765
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.44 E-value=8.8e-13 Score=138.34 Aligned_cols=189 Identities=18% Similarity=0.168 Sum_probs=134.8
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..|..++.+++|++|+|++|.++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 468999999999999988999999999999999999998 6777665 8999999999999976666799999999999
Q ss_pred ccCCccc--ccCChhhcCCCCCCeeeccCcccccccCCcccc--------ccccCCcc-cccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFE--GSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV--------NRKFGQYG-FKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~--g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~--------~~~~~~~~-~~~~~~~~~~~l~~s~n~l~~ 218 (680)
+++|.++ +..|..+..+ +|+.|++++|.+++ +|..... .+.+.... ..+..+..++.++++.|++++
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 9999996 4778888888 99999999999886 4431110 11111111 345666777778888888877
Q ss_pred CcchhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCC-CCccccccCCCCCC
Q 005734 219 SSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGS-SSDQVIALPTSRSS 269 (680)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~-~~~~~~~~~~~~~~ 269 (680)
..+..+. .+.++. .+.++.|++...+..... ..++..++..|..+
T Consensus 232 ~~~~~~~----~l~~L~--~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 232 IENGSLS----FLPTLR--ELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNIT 277 (332)
T ss_dssp CCTTGGG----GCTTCC--EEECCSSCCCBCCTTGGGCTTCCEEECCSSCCC
T ss_pred CChhHhh----CCCCCC--EEECCCCcCeecChhhhcCccCCEEECCCCCCC
Confidence 6665544 112222 334455666544332211 12344455555433
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=2.4e-13 Score=151.84 Aligned_cols=177 Identities=20% Similarity=0.159 Sum_probs=119.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCc--cCccccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG--IIPVEISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L 148 (680)
.+++.|++++|.+.+.. .+..+++|++|++++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|
T Consensus 302 ~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L 379 (520)
T 2z7x_B 302 MNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379 (520)
T ss_dssp CCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE
T ss_pred CceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE
Confidence 45888888888876432 12677888888888888888888888888888888888888886 566778888888888
Q ss_pred EccCCcccccCChh-hcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhh
Q 005734 149 LLGNNKFEGSIPLE-LSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQH 227 (680)
Q Consensus 149 ~L~~N~l~g~~P~~-l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~ 227 (680)
++++|.+++.+|.. +..+++|+.|++++|.+++.+|.. +. ..++.++++.|+++ .+|..+.
T Consensus 380 ~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------l~--~~L~~L~Ls~N~l~-~ip~~~~-- 441 (520)
T 2z7x_B 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC-------------LP--PRIKVLDLHSNKIK-SIPKQVV-- 441 (520)
T ss_dssp ECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGS-------------CC--TTCCEEECCSSCCC-CCCGGGG--
T ss_pred ECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhh-------------hc--ccCCEEECCCCccc-ccchhhh--
Confidence 88888888767764 777888888888888888766641 11 34556777777776 4444433
Q ss_pred hhhhhhHHhhhhhhcccccCCCCCC-CC-CCCccccccCCCCCCCC
Q 005734 228 SQNLINVARRKLLEQSSNLAAEPAT-VG-SSSDQVIALPTSRSSGT 271 (680)
Q Consensus 228 ~~~~~~l~~~~l~~~~n~l~~~~~~-~~-~~~~~~~~~~~~~~~g~ 271 (680)
.+.++. .+.+++|++...+.. .. ...++..++..|..++.
T Consensus 442 --~l~~L~--~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 442 --KLEALQ--ELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp --GCTTCC--EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred --cCCCCC--EEECCCCcCCccCHHHhccCCcccEEECcCCCCccc
Confidence 111222 333455666544332 11 11244455566655443
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.43 E-value=6.2e-13 Score=125.85 Aligned_cols=107 Identities=19% Similarity=0.274 Sum_probs=93.8
Q ss_pred eEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCC
Q 005734 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153 (680)
Q Consensus 74 ~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 153 (680)
+.+++++|.++ .+|..+. +.|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999986 6777664 89999999999999988999999999999999999999755556789999999999999
Q ss_pred cccccCChhhcCCCCCCeeeccCccccccc
Q 005734 154 KFEGSIPLELSRFTLLSELQFDDYLTSAEV 183 (680)
Q Consensus 154 ~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~ 183 (680)
++++..+..|..+++|++|+|++|.+....
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999655556999999999999999887543
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-13 Score=137.47 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=116.5
Q ss_pred CCcEeEEEcCCCC-CcccCCcccCCCCCCCEEEccC-ccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCc-
Q 005734 70 NGKVQMLDMKERS-LEGTLAPDLGKLSDLRFLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLK- 146 (680)
Q Consensus 70 ~~~l~~L~l~~~~-l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~- 146 (680)
..+++.|++++|. +++..+..|..+++|++|++++ |.+++..+..|.++++|++|+|++|++++ +|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3689999999997 8876666899999999999998 99998777889999999999999999996 887 88999998
Q ss_pred --EEEccCC-cccccCChhhcCCCCCC-eeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCC-CCCCcc
Q 005734 147 --RLLLGNN-KFEGSIPLELSRFTLLS-ELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCAN-LPGSSE 221 (680)
Q Consensus 147 --~L~L~~N-~l~g~~P~~l~~l~~L~-~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~-l~~~~~ 221 (680)
+|++++| .+++..+..|.++++|+ .|++++|.++ .+|.. .+.. ..++.++++.|. +++..+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~------------~~~~-~~L~~L~L~~n~~l~~i~~ 197 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY------------AFNG-TKLDAVYLNKNKYLTVIDK 197 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT------------TTTT-CEEEEEECTTCTTCCEECT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh------------hcCC-CCCCEEEcCCCCCcccCCH
Confidence 9999999 99976667799999999 9999999998 66652 1222 456678888884 876555
Q ss_pred hhhh
Q 005734 222 THLV 225 (680)
Q Consensus 222 ~~~~ 225 (680)
..+.
T Consensus 198 ~~~~ 201 (239)
T 2xwt_C 198 DAFG 201 (239)
T ss_dssp TTTT
T ss_pred HHhh
Confidence 4444
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6.3e-13 Score=153.44 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=84.1
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.++.|++++|.+++..|..+..+++|++|+|++|.+++.+| ..+..+++|++|+|++|++++..|..+..+++|+.|++
T Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l 461 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 461 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEEC
T ss_pred cCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchh
Confidence 56777777777877777778888888888888888877666 56778888888888888877666666777777777777
Q ss_pred cCCccc--ccCChhhcCCCCCCeeeccCcccccccC
Q 005734 151 GNNKFE--GSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 151 ~~N~l~--g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
++|.++ +.+|..++++++|+.|++++|.+++..|
T Consensus 462 ~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~ 497 (680)
T 1ziw_A 462 RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIND 497 (680)
T ss_dssp TTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCT
T ss_pred ccccccccccCCcccccCCCCCEEECCCCCCCcCCh
Confidence 777665 4566777777777777777777765444
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=6e-13 Score=150.13 Aligned_cols=142 Identities=15% Similarity=0.140 Sum_probs=120.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++.|++++|.+.+..+ .+..+++|++|++++|.+.+..| ..+..+++|++|+|++|.+++..|..+..+++|+.|
T Consensus 372 ~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 372 TTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp CSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred cCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 3689999999999986544 48999999999999999988766 568899999999999999998889899999999999
Q ss_pred EccCCccc-ccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 149 LLGNNKFE-GSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 149 ~L~~N~l~-g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++++|.++ +.+|..++.+++|+.|++++|.+++..|. .+..+..++.+++++|++++.++..+.
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~l~~n~l~~~~~~~~~ 515 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT-------------AFNSLSSLQVLNMASNQLKSVPDGIFD 515 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT-------------TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChh-------------hhhcccCCCEEeCCCCcCCCCCHHHhh
Confidence 99999997 67899999999999999999999887665 345566777888888888887776655
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.2e-13 Score=150.02 Aligned_cols=135 Identities=17% Similarity=0.187 Sum_probs=113.4
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcc--cCCcccCCCCCCCEEEccCCcCCccCccc-cCCCCCCc
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSG--VIPKELGELTKLELLDLSNNKLSGIIPVE-ISRLPSLK 146 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 146 (680)
..+++.|++++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|+.|+|++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4689999999999999999999999999999999999997 34577999999999999999999867764 78899999
Q ss_pred EEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 147 RLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 147 ~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
.|+|++|.+++.+|..+. ++|+.|++++|.++ .+|. .+..+..++.++++.|++++..
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~-------------~~~~l~~L~~L~L~~N~l~~l~ 489 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPK-------------DVTHLQALQELNVASNQLKSVP 489 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCT-------------TTTSSCCCSEEECCSSCCCCCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccCh-------------hhcCCCCCCEEECCCCCCCCCC
Confidence 999999999988877654 78999999999888 4554 2235566777888888887533
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=6.9e-13 Score=149.10 Aligned_cols=109 Identities=28% Similarity=0.375 Sum_probs=100.7
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.|+|++|.|++ +|. ++.+++|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|++ +| .++.|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 57899999999997 665 999999999999999999 889999999999999999999996 78 89999999999999
Q ss_pred CCcccccC-ChhhcCCCCCCeeeccCcccccccCC
Q 005734 152 NNKFEGSI-PLELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 152 ~N~l~g~~-P~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
+|++++.. |..++.+++|+.|+|++|.+++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999876 99999999999999999999987665
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1e-12 Score=137.66 Aligned_cols=174 Identities=19% Similarity=0.239 Sum_probs=120.9
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC--ccCccccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS--GIIPVEISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L 148 (680)
.+++.|+|++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|+.|+|++|.++ +..|..+..+++|++|
T Consensus 100 ~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 100 VKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp TTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 57899999999988 5666554 78999999999998777777888999999999999885 3677788888899999
Q ss_pred EccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhh
Q 005734 149 LLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHS 228 (680)
Q Consensus 149 ~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~ 228 (680)
++++|.++ .+|..+. ++|+.|++++|.+++..|. .+..+..++.++++.|++++..+..+.
T Consensus 177 ~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~--- 237 (330)
T 1xku_A 177 RIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAA-------------SLKGLNNLAKLGLSFNSISAVDNGSLA--- 237 (330)
T ss_dssp ECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTG-------------GGTTCTTCCEEECCSSCCCEECTTTGG---
T ss_pred ECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHH-------------HhcCCCCCCEEECCCCcCceeChhhcc---
Confidence 99988888 4676554 7888888888888765543 344556677777888877776654443
Q ss_pred hhhhhHHhhhhhhcccccCCCCCCCCC-CCccccccCCCCCC
Q 005734 229 QNLINVARRKLLEQSSNLAAEPATVGS-SSDQVIALPTSRSS 269 (680)
Q Consensus 229 ~~~~~l~~~~l~~~~n~l~~~~~~~~~-~~~~~~~~~~~~~~ 269 (680)
.+.++. .+.+++|++...+..... ..++..++..|..+
T Consensus 238 -~l~~L~--~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 238 -NTPHLR--ELHLNNNKLVKVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp -GSTTCC--EEECCSSCCSSCCTTTTTCSSCCEEECCSSCCC
T ss_pred -CCCCCC--EEECCCCcCccCChhhccCCCcCEEECCCCcCC
Confidence 111222 334455666544332221 12445555555444
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=149.41 Aligned_cols=140 Identities=18% Similarity=0.174 Sum_probs=66.7
Q ss_pred cEeEEEcCCCCCcccCC-cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC-ccCccccCCCCCCcEEE
Q 005734 72 KVQMLDMKERSLEGTLA-PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS-GIIPVEISRLPSLKRLL 149 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~ 149 (680)
.++.+++..++.....+ ..+..+..++.++++.|.+.+..|..+..+++|+.|+|++|.+. +.+|..+..+++|++|+
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 44555555444443332 23444555555555555555444444555555555555555422 23344445555555555
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
|++|++++..|..|+++++|++|+|++|++++..|. .|..+..++.++++.|+|++.+|..+
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~l 562 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF-------------PYKCLNSLQVLDYSLNHIMTSKKQEL 562 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCG-------------GGTTCTTCCEEECTTSCCCBCCSSCT
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChh-------------HHhCCCCCCEEECCCCcCCCCCHHHH
Confidence 555555544444555555555555555554443332 23333444445555555555444444
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-13 Score=141.11 Aligned_cols=131 Identities=22% Similarity=0.176 Sum_probs=89.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+++..|..+..+++|++|+|++|.+++..| +..+++|++|+|++|++++ +| .+++|+.|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-cc----CCCCcCEEEC
Confidence 367888888888887766778888888888888888876544 7788888888888888874 33 2367777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
++|.+++..+. .+++|+.|++++|.+++..|. .+..+..++.++++.|++++..+..+
T Consensus 107 ~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~-------------~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDL-------------DEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp CSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGB-------------CTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred CCCccCCcCcc---ccCCCCEEECCCCCCCCccch-------------hhhccCCCCEEECCCCCCCcccHHHH
Confidence 77777754333 356677777777777664443 23334455666666666666555444
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2.6e-13 Score=152.47 Aligned_cols=116 Identities=22% Similarity=0.290 Sum_probs=106.4
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCc-cCccccCCCCCCcEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG-IIPVEISRLPSLKRL 148 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 148 (680)
..++++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|++++ .+|..++++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 4689999999999999888899999999999999999998877789999999999999999996 467889999999999
Q ss_pred EccCCcccccCC-hhhcCCCCCCeeeccCcccccccCC
Q 005734 149 LLGNNKFEGSIP-LELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 149 ~L~~N~l~g~~P-~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++++|.+.+.+| ..++++++|++|++++|.+++.+|.
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 999999666676 5799999999999999999988776
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-12 Score=133.91 Aligned_cols=128 Identities=20% Similarity=0.267 Sum_probs=81.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+..+++|+.|+|++|++++ +|. +..+++|+.|++
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 466777777777764333 6777777777777777764 33 56677777777777777764 443 667777777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
++|.+++ +|. ++.+++|+.|++++|.+++..+ +..+..++.++++.|++++..+
T Consensus 137 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~---------------l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 137 DLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP---------------LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG---------------GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh---------------hcCCCCCCEEECCCCccCcChh
Confidence 7777764 333 6677777777777776654211 3344555666666666665443
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=135.90 Aligned_cols=136 Identities=17% Similarity=0.115 Sum_probs=66.6
Q ss_pred EeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccC-CCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 73 VQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG-ELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 73 l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
++.|++++|.+++..+..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|++++. |. ...+++|+.|+|+
T Consensus 122 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls 199 (317)
T 3o53_A 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLS 199 (317)
T ss_dssp CEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECC
T ss_pred CCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECC
Confidence 44444444444444444444445555555555555444444332 345555555555555422 22 2234555555555
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC-CCcchhhh
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP-GSSETHLV 225 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~-~~~~~~~~ 225 (680)
+|.+++ +|..+..+++|+.|++++|.++. +|. .+..+..++.+++++|++. +.+|..+.
T Consensus 200 ~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~-------------~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 200 SNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEK-------------ALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp SSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECT-------------TCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred CCcCCc-chhhhcccCcccEEECcCCcccc-hhh-------------HhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 555553 33335555555555555555442 222 3445566777788888877 44444433
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-12 Score=131.78 Aligned_cols=102 Identities=21% Similarity=0.315 Sum_probs=51.9
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+++.|++++|.+... +.+..+++|++|+|++|.+++. +. +..+++|+.|+|++|++++ +| .+..+++|++|+|+
T Consensus 47 ~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 445555555555432 2245555555555555555532 22 5555555555555555553 22 25555555555555
Q ss_pred CCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
+|.+++ + ..+..+++|+.|++++|.+++
T Consensus 121 ~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~ 148 (291)
T 1h6t_A 121 HNGISD-I-NGLVHLPQLESLYLGNNKITD 148 (291)
T ss_dssp TSCCCC-C-GGGGGCTTCCEEECCSSCCCC
T ss_pred CCcCCC-C-hhhcCCCCCCEEEccCCcCCc
Confidence 555553 2 235555555555555555543
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=4.4e-12 Score=131.59 Aligned_cols=169 Identities=19% Similarity=0.205 Sum_probs=127.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+++++.+.. ++ .+..+++|++|+|++|.+++ +|. +..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 478999999999985 44 68999999999999999996 444 9999999999999999995 55 6999999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQN 230 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~ 230 (680)
++|.+++ +|. +..+++|++|++++|.+++..+ +..+..++.++++.|++++..+ +. .
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~---------------l~~l~~L~~L~l~~n~l~~~~~--l~----~ 171 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP---------------LAGLTNLQYLSIGNAQVSDLTP--LA----N 171 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG---------------GGGCTTCCEEECCSSCCCCCGG--GT----T
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc---------------ccCCCCccEEEccCCcCCCChh--hc----C
Confidence 9999996 554 9999999999999999876322 3456678889999999987554 33 2
Q ss_pred hhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCCC
Q 005734 231 LINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSSG 270 (680)
Q Consensus 231 ~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~g 270 (680)
+.++. .+.++.|++...+.-.....++..++..|..++
T Consensus 172 l~~L~--~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~ 209 (308)
T 1h6u_A 172 LSKLT--TLKADDNKISDISPLASLPNLIEVHLKNNQISD 209 (308)
T ss_dssp CTTCC--EEECCSSCCCCCGGGGGCTTCCEEECTTSCCCB
T ss_pred CCCCC--EEECCCCccCcChhhcCCCCCCEEEccCCccCc
Confidence 22222 344556666654432122234445555554443
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.35 E-value=8.1e-13 Score=121.43 Aligned_cols=114 Identities=20% Similarity=0.257 Sum_probs=100.1
Q ss_pred CCCCCCEEEccCccCc-ccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCe
Q 005734 93 KLSDLRFLVLQKNHFS-GVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSE 171 (680)
Q Consensus 93 ~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~ 171 (680)
..++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..++.+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 88999999999999999999999965 78999999999999999999889998999999999
Q ss_pred eeccCcccccc-cCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 172 LQFDDYLTSAE-VAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 172 L~l~~N~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|++++|.+++. .+. .+..+..++.++++.|++++..+
T Consensus 93 L~ls~N~i~~~~~~~-------------~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIE-------------PLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHG-------------GGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHH-------------HHhhCCCCCEEeCcCCcccchHH
Confidence 99999998863 222 35566778889999999987665
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.5e-12 Score=123.27 Aligned_cols=132 Identities=19% Similarity=0.171 Sum_probs=104.2
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCC-CCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLS-DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|.++. +| .+..+. +|++|+|++|.|++. ..+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 478999999999984 44 455555 999999999999975 6899999999999999999965445558999999999
Q ss_pred ccCCcccccCCh--hhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 150 LGNNKFEGSIPL--ELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 150 L~~N~l~g~~P~--~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
|++|.++ .+|. .++.+++|+.|++++|.++. +|... ...+..+..++.++++.|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~---------~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYR---------LYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHH---------HHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHH---------HHHHHHCCccceeCCCcCCHH
Confidence 9999996 5776 79999999999999999873 34310 002344566777888777653
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.7e-12 Score=135.50 Aligned_cols=109 Identities=25% Similarity=0.312 Sum_probs=93.7
Q ss_pred CCccceeeeCCCcEeEEEcCCC-CCcccCCcccCCCCCCCEEEccC-ccCcccCCcccCCCCCCCEEEccCCcCCccCcc
Q 005734 60 PCLWSGVRCLNGKVQMLDMKER-SLEGTLAPDLGKLSDLRFLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPV 137 (680)
Q Consensus 60 ~c~w~gv~c~~~~l~~L~l~~~-~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 137 (680)
.|.|..|.|. ++ +|+ .+|. +..+++|+.|+|++ |.|++..|..|.+|++|+.|+|++|+|++..|.
T Consensus 7 ~C~~~~v~~~----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 7 PHGSSGLRCT----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp CSSSSCEECC----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred cccCCEEEcC----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 4888777665 44 566 3787 99999999999996 999988888999999999999999999998899
Q ss_pred ccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 138 EISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
.|.+|++|+.|+|++|+|++..|..+..++ |+.|+|.+|.+..
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999999999999999999965555566665 9999999998864
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.8e-12 Score=142.50 Aligned_cols=134 Identities=17% Similarity=0.202 Sum_probs=86.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+|++|.|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 46788888888887 566 456788888888888876 666 554 78888888888875 665 5677777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccc-------cccccCCcccccCCCCCC-------cccCCCCCCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRS-------VNRKFGQYGFKIGEDSLH-------TNGDHSCANL 216 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~-------~~~~~~~~~~~~~~~~~~-------~~l~~s~n~l 216 (680)
++|.+++ +|. .+++|+.|+|++|.+++ +|.+.. ..+.+..++. +.. ++ ..+++++|+|
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cchhhCCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcc
Confidence 7777775 665 45677777777777766 554210 0111222222 222 44 7788888888
Q ss_pred CCCcchhhh
Q 005734 217 PGSSETHLV 225 (680)
Q Consensus 217 ~~~~~~~~~ 225 (680)
+. +|..+.
T Consensus 220 ~~-lp~~l~ 227 (571)
T 3cvr_A 220 TH-IPENIL 227 (571)
T ss_dssp CC-CCGGGG
T ss_pred ee-cCHHHh
Confidence 75 555444
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.32 E-value=4.4e-12 Score=119.43 Aligned_cols=102 Identities=24% Similarity=0.323 Sum_probs=90.5
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
+-|.|+.+.|.. ..++.|+|++|.+++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 7 C~C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 7 CSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 447888888853 468999999999999889999999999999999999997777778999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccccCC
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIP 160 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P 160 (680)
+|+|++..|..|..+++|++|+|++|.+++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999997666679999999999999999986543
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.2e-12 Score=141.51 Aligned_cols=138 Identities=18% Similarity=0.159 Sum_probs=90.3
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+++ +| ++.+++|+.|++++|.+++. .++.+++|+.|+|++|++++ +| ++.+++|+.|++
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 568888888888886 44 77788888888888888764 37778888888888888886 66 777888888888
Q ss_pred cCCcccccCChhhcCCC-------CCCeeeccCcccccccCCcccc---------c----------cccCCcccccCCCC
Q 005734 151 GNNKFEGSIPLELSRFT-------LLSELQFDDYLTSAEVAGIRSV---------N----------RKFGQYGFKIGEDS 204 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~-------~L~~L~l~~N~~~g~~p~~~~~---------~----------~~~~~~~~~~~~~~ 204 (680)
++|++++..+..+.++. +|+.|++++|.+.|.+|..... + ..+.. ..+....
T Consensus 241 ~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~--L~l~~~~ 318 (457)
T 3bz5_A 241 SVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITE--LDLSQNP 318 (457)
T ss_dssp CSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSC--CCCTTCT
T ss_pred eCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceE--echhhcc
Confidence 88888765444444443 4455555555555555431100 0 00111 1344556
Q ss_pred CCcccCCCCCCCCCC
Q 005734 205 LHTNGDHSCANLPGS 219 (680)
Q Consensus 205 ~~~~l~~s~n~l~~~ 219 (680)
.++.++++.|++++.
T Consensus 319 ~L~~L~L~~N~l~~l 333 (457)
T 3bz5_A 319 KLVYLYLNNTELTEL 333 (457)
T ss_dssp TCCEEECTTCCCSCC
T ss_pred cCCEEECCCCccccc
Confidence 667777888888774
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.31 E-value=4e-12 Score=119.33 Aligned_cols=109 Identities=26% Similarity=0.231 Sum_probs=98.1
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCc--cccCCCCCCcE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP--VEISRLPSLKR 147 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~ 147 (680)
..+++.|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+|++|++++ +| ..+..+++|++
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKS 124 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCE
Confidence 46899999999999976 789999999999999999998889888889999999999999995 44 78999999999
Q ss_pred EEccCCcccccCC---hhhcCCCCCCeeeccCccccc
Q 005734 148 LLLGNNKFEGSIP---LELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 148 L~L~~N~l~g~~P---~~l~~l~~L~~L~l~~N~~~g 181 (680)
|++++|.+++..+ ..+..+++|++|++++|.+..
T Consensus 125 L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 125 LDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999996554 479999999999999998764
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.9e-12 Score=141.82 Aligned_cols=46 Identities=11% Similarity=-0.000 Sum_probs=12.5
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCC
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGEL 118 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 118 (680)
+++.|++++|.+ |.+|++++++++|++|++++|.+.|.+|..++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l 57 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQ 57 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccc
Confidence 445555555555 4555555555555555555555555555544443
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.30 E-value=3.9e-12 Score=143.83 Aligned_cols=127 Identities=30% Similarity=0.363 Sum_probs=102.3
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+|+.|+|++|.+.+..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++ +| .+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEE
Confidence 4678899999998886544 8888999999999999885 34 68888999999999999885 43 588889999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
|++|.+++. ..++.+++|+.|+|++|.+++..| +..+..|..|++++|+|++.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~---------------l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP---------------LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG---------------GTTCTTCCEEECCSSCCCBC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh---------------hccCCCCCEEECcCCCCCCC
Confidence 999998864 568888999999999998876544 34456677889999998874
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-11 Score=134.54 Aligned_cols=104 Identities=17% Similarity=0.166 Sum_probs=93.5
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|++++|...+.+ .++.+++|+.|++++|++++ +| ++.+++|+.|++++|++++. .++.+++|+.|+
T Consensus 147 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~ 218 (457)
T 3bz5_A 147 NTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLD 218 (457)
T ss_dssp CTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEE
T ss_pred CCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEE
Confidence 468999999999777776 48899999999999999997 56 89999999999999999964 389999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+++|++++ +| ++.+++|+.|++++|.+++..+
T Consensus 219 Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 219 CSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC
T ss_pred CcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH
Confidence 99999997 77 8999999999999999998644
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.8e-11 Score=125.94 Aligned_cols=127 Identities=30% Similarity=0.361 Sum_probs=109.7
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ + +.+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 4689999999999997544 9999999999999999986 34 59999999999999999996 4 4689999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
+++|.+++. ..++.+++|+.|++++|.+++..| +..+..++.++++.|++++.
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~---------------l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP---------------LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG---------------GTTCTTCCEEECCSSCCCBC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh---------------hcCCCccCEEECCCCcCCCC
Confidence 999999964 579999999999999999886433 34566788899999999874
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1e-11 Score=140.47 Aligned_cols=128 Identities=17% Similarity=0.240 Sum_probs=103.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..|+.|+|++|.+.. ++ .+..|++|+.|+|++|.|++..| +..+++|+.|+|++|.+++ +| .+..|++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 467888899888874 33 58889999999999999986544 8889999999999999985 44 6888999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
++|.+++ +| .+..+++|+.|+|++|.+++. + .+..+..|+.|+++.|++++..|
T Consensus 117 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~--------------~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 117 EHNGISD-IN-GLVHLPQLESLYLGNNKITDI-T--------------VLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp TTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC-G--------------GGGSCTTCSEEECCSSCCCCCGG
T ss_pred cCCCCCC-Cc-cccCCCccCEEECCCCccCCc-h--------------hhcccCCCCEEECcCCcCCCchh
Confidence 9999985 43 588899999999999988753 2 34556778888999999988766
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2e-11 Score=134.34 Aligned_cols=141 Identities=27% Similarity=0.347 Sum_probs=82.8
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+.+. +.+..+++|++|++++|.+.+..| ++.+++|+.|+|++|++++ ++ .+..+++|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l 250 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDL 250 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEEC
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEEC
Confidence 4677777777776643 236667777777777777765444 5566677777777777663 33 4566666777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCcccc---------ccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSV---------NRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
++|.+++..| +..+++|+.|++++|.+++..+ .... .+.+... ..+..+..++.++++.|++++..|
T Consensus 251 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCC-GGGGGCTTCSEEECCSSCCSCCGG
T ss_pred CCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCc-hhhcCCCCCCEEECcCCcCCCchh
Confidence 7776665433 6666667777776666655332 1000 0001111 123445566667777777776654
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.3e-11 Score=130.38 Aligned_cols=152 Identities=16% Similarity=0.080 Sum_probs=90.3
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCE-EE
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLEL-LD 125 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~-L~ 125 (680)
|-|.|+.|.|.. .+++.|+|++|.|+...+..|.++++|++|+|++|.+.+.+| ..|.++++|.. +.
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 347899999963 246667777777764434456677777777777777655554 34566666554 45
Q ss_pred ccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCC-C
Q 005734 126 LSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGED-S 204 (680)
Q Consensus 126 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~-~ 204 (680)
++.|++++..|..|..+++|++|++++|.+++..+..+....++..|++.++.....+|.. .|..+ .
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~------------~f~~~~~ 154 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERN------------SFVGLSF 154 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTT------------SSTTSBS
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccccc------------chhhcch
Confidence 5566776555666667777777777777776544444555555666666554332333321 12222 2
Q ss_pred CCcccCCCCCCCCCCcch
Q 005734 205 LHTNGDHSCANLPGSSET 222 (680)
Q Consensus 205 ~~~~l~~s~n~l~~~~~~ 222 (680)
.+..++++.|+++...+.
T Consensus 155 ~l~~L~L~~N~i~~i~~~ 172 (350)
T 4ay9_X 155 ESVILWLNKNGIQEIHNS 172 (350)
T ss_dssp SCEEEECCSSCCCEECTT
T ss_pred hhhhhccccccccCCChh
Confidence 345677888888754433
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.5e-11 Score=122.85 Aligned_cols=125 Identities=24% Similarity=0.279 Sum_probs=102.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.++. ++ .+..+++|++|+|++|.|++. |. +..+++|+.|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 578999999999884 45 688899999999999999864 44 8999999999999999985 55433 3 89999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
++|++++ +| .++.+++|+.|++++|.+++. + .+..+..++.++++.|++++.
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~--------------~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V--------------MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G--------------GGGGCTTCCEEECTTSCCCBC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h--------------HHccCCCCCEEECCCCcCcch
Confidence 9999996 44 588999999999999988763 2 244566778889999998876
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.2e-11 Score=113.99 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=93.4
Q ss_pred CCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccC
Q 005734 97 LRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176 (680)
Q Consensus 97 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~ 176 (680)
-+.+++++|.+. .+|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999996 7888775 8999999999999988899999999999999999999975555679999999999999
Q ss_pred cccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 177 YLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 177 N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
|.+++..+. .|..+..++.++++.|++....+
T Consensus 91 N~l~~l~~~-------------~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRG-------------AFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTT-------------TTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHH-------------HhccccCCCEEEeCCCCcccccc
Confidence 999864433 35667788889999999986543
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.24 E-value=5.7e-11 Score=130.07 Aligned_cols=134 Identities=22% Similarity=0.314 Sum_probs=97.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+++ +|.. .++|++|++++|.+++ +| .++++++|++|++++|++++ +|..+ .+|++|++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 456777777776664 2221 1689999999999996 78 59999999999999999995 77644 58999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccc-------cccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRS-------VNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~-------~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
++|.+++ +| .++++++|++|++++|.+++ +|.... ..+.+..++ .+..+..++.++++.|++++
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNNILEELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCCcCCccc-ccCCCCCCCEEECCCCcCCc
Confidence 9999996 77 68999999999999999887 443211 011222222 35566667777777777775
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=139.49 Aligned_cols=108 Identities=20% Similarity=0.232 Sum_probs=83.7
Q ss_pred CCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeecc
Q 005734 96 DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFD 175 (680)
Q Consensus 96 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~ 175 (680)
.|+.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..++.|++|+.|+|++|.+++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46778888888875 665 888888888888888888 778888888888888888888885 67 78888888888888
Q ss_pred Cccccccc-CCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 176 DYLTSAEV-AGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 176 ~N~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
+|.+++.+ |. .+..+..+..+++++|++++.+|
T Consensus 517 ~N~l~~~~~p~-------------~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQ-------------PLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTG-------------GGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcH-------------HHhcCCCCCEEEecCCcCCCCcc
Confidence 88887765 54 34556677778888888877655
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1.7e-11 Score=134.87 Aligned_cols=107 Identities=29% Similarity=0.352 Sum_probs=87.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|++++|.+.+. +.+..+++|+.|++++|.+++..| +..+++|+.|+|++|.+++. |. +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 35788999999988753 457888999999999999986544 88899999999999999854 44 88899999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
+++|.+++..| ++.+++|+.|++++|.+++..|
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 99999986443 7888999999999998887654
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.23 E-value=8.8e-12 Score=141.21 Aligned_cols=117 Identities=26% Similarity=0.384 Sum_probs=92.2
Q ss_pred CCCCCCCCCCCCCccceee--------eCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCC
Q 005734 49 VFSNWNKNDSTPCLWSGVR--------CLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTK 120 (680)
Q Consensus 49 ~l~~W~~~~~~~c~w~gv~--------c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 120 (680)
....|.. +.+||.|+|.. |...+++.|++++|+++ .+|..+. ++|++|+|++|.|+ .+|. .+++
T Consensus 11 ~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 11 VWSAWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 3456753 34678997643 33456899999999998 7787665 79999999999998 5676 5789
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 121 LELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 121 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
|++|+|++|+++ .+|. .+++|++|+|++|.+++ +|. .+++|+.|++++|.+++
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc
Confidence 999999999998 5776 67889999999999885 665 56788888888888875
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.4e-11 Score=122.93 Aligned_cols=127 Identities=18% Similarity=0.172 Sum_probs=107.1
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++..+ +..+++|++|+|++|++++ +|... . ++|+.|+|++|++++ +| .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 4689999999999997544 9999999999999999996 55433 3 999999999999996 55 599999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
|++|++++ +| .++.+++|+.|++++|.+++. + .+..+..++.+++++|++++..
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~--------------~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-G--------------GLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-T--------------TSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-H--------------HhccCCCCCEEeCCCCcccCCc
Confidence 99999996 55 699999999999999999864 2 3455667788888888887653
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.22 E-value=1e-11 Score=117.60 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=95.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcc--ccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV--EISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L 148 (680)
.+++.|+|++|.+++. +.++.+++|++|+|++|.|++..|..+..+++|++|+|++|+++ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999976 67999999999999999999755555699999999999999997 6776 88999999999
Q ss_pred EccCCcccccCChh----hcCCCCCCeeeccCccccc
Q 005734 149 LLGNNKFEGSIPLE----LSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 149 ~L~~N~l~g~~P~~----l~~l~~L~~L~l~~N~~~g 181 (680)
++++|.++ .+|.. +..+++|+.|++++|....
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999998 57775 8999999999999987653
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.4e-11 Score=126.80 Aligned_cols=103 Identities=25% Similarity=0.400 Sum_probs=70.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.+.+..+ +..+++|+.|++++|.+.+ ++. +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l 228 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEc
Confidence 467777887777765433 6777777777777777764 333 6677777777777777764333 666777777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
++|.+++ +|. +..+++|+.|++++|.+++
T Consensus 229 ~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~ 257 (347)
T 4fmz_A 229 GNNKITD-LSP-LANLSQLTWLEIGTNQISD 257 (347)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCC
T ss_pred cCCccCC-Ccc-hhcCCCCCEEECCCCccCC
Confidence 7777764 333 6677777777777776654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.21 E-value=2.2e-12 Score=135.35 Aligned_cols=108 Identities=23% Similarity=0.299 Sum_probs=95.9
Q ss_pred CcEeEEEcCCCCCccc-CCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCC-cCCcc-CccccCCCCCCcE
Q 005734 71 GKVQMLDMKERSLEGT-LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNN-KLSGI-IPVEISRLPSLKR 147 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 147 (680)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+..+++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5799999999998876 7888899999999999999999888999999999999999999 78863 7777888999999
Q ss_pred EEccCC-ccccc-CChhhcCCC-CCCeeeccCcc
Q 005734 148 LLLGNN-KFEGS-IPLELSRFT-LLSELQFDDYL 178 (680)
Q Consensus 148 L~L~~N-~l~g~-~P~~l~~l~-~L~~L~l~~N~ 178 (680)
|++++| .+++. +|..+..++ +|++|++++|.
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 999999 88864 677889999 99999999983
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.20 E-value=4.4e-14 Score=136.79 Aligned_cols=134 Identities=17% Similarity=0.186 Sum_probs=97.1
Q ss_pred cEeEEEcCCCCCcccCCc------ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCC
Q 005734 72 KVQMLDMKERSLEGTLAP------DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSL 145 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~------~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 145 (680)
.++.++++.+.++|.+|+ .++.+++|++|+|++|.+++ +| .+..+++|+.|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 445556666666666665 77888888888888888876 66 7788888888888888887 677777777888
Q ss_pred cEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcch
Q 005734 146 KRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 146 ~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~ 222 (680)
+.|+|++|.+++ +| .++.+++|++|++++|.+++..+. ..+..+..+..+++++|.+++.+|.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~------------~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEI------------DKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHH------------HHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHH------------HHHhcCCCCCEEEecCCcccccccc
Confidence 888888888885 55 577888888888888877642110 1244556677788888877665543
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.19 E-value=5.9e-11 Score=124.98 Aligned_cols=131 Identities=19% Similarity=0.254 Sum_probs=108.1
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|++++|.+.+..+ +..+++|+.|++++|.+++. |. +..+++|+.|+|++|.+++ + +.+..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLN 271 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEE
T ss_pred CCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEE
Confidence 3578999999999886544 78899999999999999854 44 8899999999999999985 4 4688999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcc
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSE 221 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~ 221 (680)
+++|.+++ +| .+..+++|+.|++++|.+++..|. .+..+..++.+++++|++++..|
T Consensus 272 l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~-------------~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 272 VGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDME-------------VIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHH-------------HHHTCTTCSEEECCSSSCCCCGG
T ss_pred ccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChh-------------HhhccccCCEEEccCCccccccC
Confidence 99999986 44 588899999999999998876554 34456677888999999988877
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-12 Score=135.85 Aligned_cols=111 Identities=20% Similarity=0.158 Sum_probs=100.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCccc-CCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGV-IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 6799999999999987665 67899999999999999876 888899999999999999999999999999999999999
Q ss_pred ccCC-cccc-cCChhhcCCCCCCeeeccCc-ccccc
Q 005734 150 LGNN-KFEG-SIPLELSRFTLLSELQFDDY-LTSAE 182 (680)
Q Consensus 150 L~~N-~l~g-~~P~~l~~l~~L~~L~l~~N-~~~g~ 182 (680)
|++| .+++ .+|..+.++++|++|++++| .+++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 9999 7886 37888999999999999999 88753
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.2e-12 Score=134.20 Aligned_cols=146 Identities=18% Similarity=0.119 Sum_probs=97.7
Q ss_pred CcEeEEEcCCCCCcccCC----cccCCCC-CCCEEEccCccCcccCCcccCCC-----CCCCEEEccCCcCCccCccccC
Q 005734 71 GKVQMLDMKERSLEGTLA----PDLGKLS-DLRFLVLQKNHFSGVIPKELGEL-----TKLELLDLSNNKLSGIIPVEIS 140 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p----~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~ 140 (680)
.+++.|+|++|.+++..+ ..+..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 457888888888876655 5666777 78888888888887767666664 7888888888888866665443
Q ss_pred ----CC-CCCcEEEccCCcccccCChhhc----C-CCCCCeeeccCcccccccCCccccccccCCcccccCCC-CCCccc
Q 005734 141 ----RL-PSLKRLLLGNNKFEGSIPLELS----R-FTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGED-SLHTNG 209 (680)
Q Consensus 141 ----~l-~~L~~L~L~~N~l~g~~P~~l~----~-l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~l 209 (680)
.+ ++|+.|+|++|.+++..+..++ . .++|++|+|++|.++...+.. + ...+... ..++.+
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~------l---~~~l~~~~~~L~~L 172 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDE------L---IQILAAIPANVNSL 172 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHH------H---HHHHHTSCTTCCEE
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHH------H---HHHHhcCCccccEe
Confidence 33 7888888888888766554443 3 257888888888777532221 0 0011222 256667
Q ss_pred CCCCCCCCCCcchhhh
Q 005734 210 DHSCANLPGSSETHLV 225 (680)
Q Consensus 210 ~~s~n~l~~~~~~~~~ 225 (680)
+++.|++++..+..+.
T Consensus 173 ~Ls~n~l~~~~~~~l~ 188 (362)
T 3goz_A 173 NLRGNNLASKNCAELA 188 (362)
T ss_dssp ECTTSCGGGSCHHHHH
T ss_pred eecCCCCchhhHHHHH
Confidence 7788877766665554
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1e-11 Score=132.98 Aligned_cols=146 Identities=21% Similarity=0.249 Sum_probs=101.8
Q ss_pred CCcEeEEEcCCCCCcc----cCCcccCCC---------CCCCEEEccCccCc-ccCC---cccCCCCCCCEEEccCCcCC
Q 005734 70 NGKVQMLDMKERSLEG----TLAPDLGKL---------SDLRFLVLQKNHFS-GVIP---KELGELTKLELLDLSNNKLS 132 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g----~~p~~~~~l---------~~L~~L~L~~N~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~ 132 (680)
..+++.|+|++|.+++ .++..+..+ ++|++|+|++|.++ +.+| ..+..+++|+.|+|++|+++
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 4678888888888863 345556555 78888888888887 4455 45667888888888888887
Q ss_pred --c---cCccccCCCCCCcEEEccCCccc----ccCChhhcCCCCCCeeeccCcccccccCCccccccccCCccccc--C
Q 005734 133 --G---IIPVEISRLPSLKRLLLGNNKFE----GSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKI--G 201 (680)
Q Consensus 133 --g---~~p~~~~~l~~L~~L~L~~N~l~----g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~--~ 201 (680)
| .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++..... +...+ .
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~---------l~~~l~~~ 271 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA---------VVDAFSKL 271 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH---------HHHHHHTC
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH---------HHHHHhhc
Confidence 3 34547778888888888888886 667888888888888888888877641110 00011 2
Q ss_pred CCCCCcccCCCCCCCCC----Ccchhh
Q 005734 202 EDSLHTNGDHSCANLPG----SSETHL 224 (680)
Q Consensus 202 ~~~~~~~l~~s~n~l~~----~~~~~~ 224 (680)
.+..+..+++++|++++ .+|..+
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 24556667777777776 355554
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.10 E-value=3.4e-12 Score=136.81 Aligned_cols=111 Identities=23% Similarity=0.337 Sum_probs=73.6
Q ss_pred CCcEeEEEcCCC---CCcccCCccc-------CCCCCCCEEEccCccCcc----cCCcccCCCCCCCEEEccCCcCCccC
Q 005734 70 NGKVQMLDMKER---SLEGTLAPDL-------GKLSDLRFLVLQKNHFSG----VIPKELGELTKLELLDLSNNKLSGII 135 (680)
Q Consensus 70 ~~~l~~L~l~~~---~l~g~~p~~~-------~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~ 135 (680)
..+++.|+|++| .+.+.+|..+ ..+++|++|+|++|.|++ .+|..+..+++|++|+|++|.+++..
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 356777777774 4455555544 567777777777777776 46667777777777777777776433
Q ss_pred ccccC----CC---------CCCcEEEccCCccc-ccCC---hhhcCCCCCCeeeccCcccc
Q 005734 136 PVEIS----RL---------PSLKRLLLGNNKFE-GSIP---LELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 136 p~~~~----~l---------~~L~~L~L~~N~l~-g~~P---~~l~~l~~L~~L~l~~N~~~ 180 (680)
+..+. .+ ++|++|+|++|.++ +.+| ..+..+++|+.|++++|.++
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 33332 33 67777777777776 4455 35667777777777777765
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.5e-10 Score=116.98 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=104.6
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
..++.|+++.||+.... |..+++|+....... ....+.+|+++++.++ |..+.++++++.+.+ ..++||||
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~-----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e~ 91 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG-----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMSE 91 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT-----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEEC
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCC-----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEEEEe
Confidence 56777888899999865 678999987542111 1224788999999884 677888999988766 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE---------------------------------------- 507 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~---------------------------------------- 507 (680)
+++.+|.+.+.. ......++.+++++|+.||+.
T Consensus 92 i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T 3tm0_A 92 ADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp CSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSS
T ss_pred cCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccC
Confidence 999999876421 122457889999999999981
Q ss_pred ----------------CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 508 ----------------LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 508 ----------------~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
..+.++|||++|.||+++++..+.|.||+.+..
T Consensus 165 ~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766678999987654
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.09 E-value=2.3e-10 Score=120.58 Aligned_cols=106 Identities=16% Similarity=0.040 Sum_probs=90.8
Q ss_pred CEEEccCc-cCcccCCcccCCCCCCCEEEccC-CcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeecc
Q 005734 98 RFLVLQKN-HFSGVIPKELGELTKLELLDLSN-NKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFD 175 (680)
Q Consensus 98 ~~L~L~~N-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~ 175 (680)
..++++++ .|+ .+|. +..+++|+.|+|++ |+|++..|..|..|++|+.|+|++|+|++..|..|+++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45688888 898 5888 99999999999996 99998888899999999999999999999989999999999999999
Q ss_pred CcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 176 DYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 176 ~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
+|+|++..+.. +..+. +..+++..|++...
T Consensus 89 ~N~l~~~~~~~-------------~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKT-------------VQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTT-------------TCSCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHH-------------cccCC-ceEEEeeCCCccCC
Confidence 99999654431 22222 67789999998754
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.6e-11 Score=130.47 Aligned_cols=142 Identities=14% Similarity=0.050 Sum_probs=114.0
Q ss_pred EEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC----cccCCCC-CCCEEEccCCcCCccCccccCCC-----CC
Q 005734 75 MLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP----KELGELT-KLELLDLSNNKLSGIIPVEISRL-----PS 144 (680)
Q Consensus 75 ~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~ 144 (680)
.++++.|+++|.+|..+...++|++|+|++|.|++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46789999999998877777889999999999997766 7788898 99999999999998888877775 99
Q ss_pred CcEEEccCCcccccCChhhc----CC-CCCCeeeccCcccccccCCccccccccCCcccccCC-CCCCcccCCCCCCCCC
Q 005734 145 LKRLLLGNNKFEGSIPLELS----RF-TLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGE-DSLHTNGDHSCANLPG 218 (680)
Q Consensus 145 L~~L~L~~N~l~g~~P~~l~----~l-~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~l~~s~n~l~~ 218 (680)
|++|+|++|.+++..+..++ .+ ++|+.|++++|.+++..+... . ..+.. ...++.+++++|+++.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l------~---~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF------K---QAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH------H---HHHTTSCTTCCEEECTTSCGGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH------H---HHHHhCCCceeEEEccCCcCCH
Confidence 99999999999987776544 44 899999999999976544311 0 11222 2467889999999987
Q ss_pred Ccchhhh
Q 005734 219 SSETHLV 225 (680)
Q Consensus 219 ~~~~~~~ 225 (680)
..+..+.
T Consensus 153 ~~~~~l~ 159 (362)
T 3goz_A 153 KSSDELI 159 (362)
T ss_dssp SCHHHHH
T ss_pred HHHHHHH
Confidence 6655554
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.07 E-value=5.2e-10 Score=112.41 Aligned_cols=131 Identities=8% Similarity=0.064 Sum_probs=97.5
Q ss_pred ccC-CCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc--ccceeeEEecCCCCceEEEEE
Q 005734 390 IID-TQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN--FVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG-~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lV~e 466 (680)
.++ .|..+.||+....+|..++||...... ...+.+|+++++.+++.+ +.+++++...++ ..++|||
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~--------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e 95 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLG 95 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEE
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCccc--------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEE
Confidence 344 556689999988888889999864321 134778899998886545 455888877665 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-------------------------------------- 508 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~-------------------------------------- 508 (680)
|+++.+|. ... .+ ...++.++++.|+.||+..
T Consensus 96 ~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 96 EVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp CCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred ecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 99998884 211 12 2367888889999999742
Q ss_pred -----------------CCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 509 -----------------NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 509 -----------------~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+.++|||++|.||+++++..+.|.||+.+..
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876678999998754
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.1e-10 Score=127.51 Aligned_cols=76 Identities=22% Similarity=0.250 Sum_probs=38.0
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccC-----------------CCCCCCEEEccCCcCCcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELG-----------------ELTKLELLDLSNNKLSGI 134 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~-----------------~l~~L~~L~Ls~N~l~g~ 134 (680)
+++.|++++|.+++ +|.. +++|++|+|++|.|++ +|..+. .+++|+.|+|++|.+++
T Consensus 122 ~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 122 GLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-
T ss_pred CcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-
Confidence 45555555555543 3332 2555555555555553 222222 12677777777777774
Q ss_pred CccccCCCCCCcEEEccCCccc
Q 005734 135 IPVEISRLPSLKRLLLGNNKFE 156 (680)
Q Consensus 135 ~p~~~~~l~~L~~L~L~~N~l~ 156 (680)
+|..+ ++|+.|++++|.++
T Consensus 196 l~~~~---~~L~~L~L~~N~l~ 214 (622)
T 3g06_A 196 LPTLP---SELYKLWAYNNRLT 214 (622)
T ss_dssp CCCCC---TTCCEEECCSSCCS
T ss_pred CCCcc---chhhEEECcCCccc
Confidence 44332 34444444444444
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.03 E-value=5.3e-10 Score=118.06 Aligned_cols=113 Identities=17% Similarity=0.195 Sum_probs=93.8
Q ss_pred eeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCcc-ccCCCCC
Q 005734 66 VRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPV-EISRLPS 144 (680)
Q Consensus 66 v~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~ 144 (680)
-.|.. +.++.++++|+ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++
T Consensus 7 C~C~~---~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 7 CHCSN---RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp SEEET---TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred cEeeC---CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 35654 35778899998 678766 36899999999999965556799999999999999999877775 5788998
Q ss_pred CcE-EEccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 145 LKR-LLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 145 L~~-L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
|+. +.++.|+++...|..|..+++|++|++++|.++...+
T Consensus 81 l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp CCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred hhhhhcccCCcccccCchhhhhccccccccccccccccCCc
Confidence 775 6777899998778889999999999999999986544
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=98.99 E-value=5.2e-12 Score=122.08 Aligned_cols=112 Identities=21% Similarity=0.257 Sum_probs=99.4
Q ss_pred CCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEE
Q 005734 69 LNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 69 ~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 148 (680)
...+++.|+|++|.+++ +| .+..+++|++|++++|.|+ .+|..+..+++|+.|+|++|++++ +| .+..+++|++|
T Consensus 46 ~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L 120 (198)
T 1ds9_A 46 TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVL 120 (198)
T ss_dssp HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEE
T ss_pred cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEE
Confidence 34689999999999997 66 8999999999999999998 688888888999999999999996 66 68899999999
Q ss_pred EccCCcccccCC-hhhcCCCCCCeeeccCcccccccCC
Q 005734 149 LLGNNKFEGSIP-LELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 149 ~L~~N~l~g~~P-~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
++++|.+++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 121 ~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred ECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999995322 4789999999999999999887765
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.8e-09 Score=111.85 Aligned_cols=144 Identities=10% Similarity=0.149 Sum_probs=105.7
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEee--eccchhhHHHHHHHHHHHHHHHHcCC--CCcccceeeEEecCCC-CceEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATA--ITSSKDWLKSQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEP-FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~--~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~-~~~~l 463 (680)
+.++.|.++.||+....+ ..+++|+.. .... ......+.+|.++++.++ +..+.++++++.+... ...++
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~----~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL----LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC--------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC----CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 578899999999998765 467777654 2110 112346788999999987 4567889999876531 14689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL----------------------------------- 508 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~----------------------------------- 508 (680)
||||+++..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 119 vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 99999998875422 124788899999999999999999731
Q ss_pred --------------------CCCeeecCCCCCCeeecCCCC--eEEccccccccc
Q 005734 509 --------------------NPPVAHSNLSSHCIYLTDDYA--AKVAEICFTTIA 541 (680)
Q Consensus 509 --------------------~~~ivHrDlKp~NILld~~~~--~ki~DFGla~~~ 541 (680)
.+.++|||+++.||++++++. +.|.||+.+...
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997753 689999988653
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.79 E-value=2.6e-10 Score=124.94 Aligned_cols=147 Identities=18% Similarity=0.118 Sum_probs=107.1
Q ss_pred CCcEeEEEcCCCCCcccC----Cc-ccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCCccCccccC
Q 005734 70 NGKVQMLDMKERSLEGTL----AP-DLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGIIPVEIS 140 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~----p~-~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 140 (680)
..+++.|+|++|.+++.- .+ .+..+++|++|++++|.+++. ++..+..+++|+.|+|++|.+++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 468999999999987542 22 234688999999999999864 677788899999999999999765444443
Q ss_pred -----CCCCCcEEEccCCccccc----CChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccC-CCCCCcccC
Q 005734 141 -----RLPSLKRLLLGNNKFEGS----IPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIG-EDSLHTNGD 210 (680)
Q Consensus 141 -----~l~~L~~L~L~~N~l~g~----~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~l~ 210 (680)
..++|+.|++++|.+++. +|..+..+++|+.|++++|.+++..+.... ..+. ....++.++
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~---------~~l~~~~~~L~~L~ 376 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC---------QGLGQPGSVLRVLW 376 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH---------HHHTSTTCCCCEEE
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH---------HHHcCCCCceEEEE
Confidence 236999999999999865 677788889999999999988765332100 0111 134566677
Q ss_pred CCCCCCCC----Ccchhhh
Q 005734 211 HSCANLPG----SSETHLV 225 (680)
Q Consensus 211 ~s~n~l~~----~~~~~~~ 225 (680)
+++|++++ .+|..+.
T Consensus 377 L~~n~i~~~~~~~l~~~l~ 395 (461)
T 1z7x_W 377 LADCDVSDSSCSSLAATLL 395 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHH
T ss_pred CCCCCCChhhHHHHHHHHH
Confidence 78887775 5565554
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=98.75 E-value=2.7e-10 Score=124.76 Aligned_cols=146 Identities=17% Similarity=0.141 Sum_probs=112.6
Q ss_pred CcEeEEEcCCCCCccc----CCcccCCCCCCCEEEccCccCcccC-----CcccCCCCCCCEEEccCCcCCcc----Ccc
Q 005734 71 GKVQMLDMKERSLEGT----LAPDLGKLSDLRFLVLQKNHFSGVI-----PKELGELTKLELLDLSNNKLSGI----IPV 137 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 137 (680)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++.- +..+..+++|+.|+|++|.+++. ++.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 4899999999999874 5777888999999999999997642 33344689999999999999964 678
Q ss_pred ccCCCCCCcEEEccCCcccccCChhhcC-----CCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCC
Q 005734 138 EISRLPSLKRLLLGNNKFEGSIPLELSR-----FTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHS 212 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g~~P~~l~~-----l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s 212 (680)
.+..+++|++|+|++|.+++..+..+.. .++|+.|++++|.+++..... +...+..+..++.++++
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~---------l~~~l~~~~~L~~L~Ls 349 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSH---------FSSVLAQNRFLLELQIS 349 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH---------HHHHHHHCSSCCEEECC
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHH---------HHHHHhhCCCccEEEcc
Confidence 8888999999999999998655544443 369999999999987642110 01134455677889999
Q ss_pred CCCCCCCcchhhh
Q 005734 213 CANLPGSSETHLV 225 (680)
Q Consensus 213 ~n~l~~~~~~~~~ 225 (680)
+|++++..+..+.
T Consensus 350 ~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 350 NNRLEDAGVRELC 362 (461)
T ss_dssp SSBCHHHHHHHHH
T ss_pred CCccccccHHHHH
Confidence 9998876555444
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.5e-08 Score=104.68 Aligned_cols=181 Identities=15% Similarity=0.173 Sum_probs=118.5
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCc--ccceeeEEecCCC-CceEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKN--FVNLIGYCEDDEP-FNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~n--iv~l~g~~~~~~~-~~~~lV 464 (680)
+.++.|....||+.. ..+++|..... .....+.+|.++++.+. +.. +.+++++....+. ...++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 457889999999863 45777764321 23456889999998884 333 3344444433221 124789
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE------------------------------------- 507 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~------------------------------------- 507 (680)
|||+++.+|.+... ..++..++..++.++++.|+.||..
T Consensus 95 m~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999988875432 2467778888889999998888861
Q ss_pred ------------------CCCCeeecCCCCCCeeecC--CCCeEEcccccccccCCCCCc----cc---cccc---CCC-
Q 005734 508 ------------------LNPPVAHSNLSSHCIYLTD--DYAAKVAEICFTTIALPKSKV----SD---DIEN---SVL- 556 (680)
Q Consensus 508 ------------------~~~~ivHrDlKp~NILld~--~~~~ki~DFGla~~~~~~~~~----~~---~~~~---~~~- 556 (680)
..+.++|+|++|.||++++ ...+.|.||+.+....+.... .. ..+. ...
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 1245899999999999998 456789999988764321100 00 0000 000
Q ss_pred -CCCCC-C--------CCCeeehhHHHHHHHhCCCCCC
Q 005734 557 -PPLAD-P--------ETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 557 -~~~~s-~--------~sDVySfGvvllElltG~~p~~ 584 (680)
.+..+ + ..+.|+++++++++.+|+.+|.
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 01111 1 1578999999999999998764
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.60 E-value=6.9e-10 Score=118.02 Aligned_cols=141 Identities=11% Similarity=0.045 Sum_probs=94.8
Q ss_pred CcEeEEEcCCCCCcccCCcccC-----CCCCCCEEEccCccCcccCCccc-CCCCCCCEEEccCCcCCccCcccc-----
Q 005734 71 GKVQMLDMKERSLEGTLAPDLG-----KLSDLRFLVLQKNHFSGVIPKEL-GELTKLELLDLSNNKLSGIIPVEI----- 139 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~-----~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~----- 139 (680)
..++.|+|++|.++......+. ..++|+.|+|++|.|+..-...+ ..+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 5688999999988754333322 23689999999998865333232 345688999999999875433333
Q ss_pred CCCCCCcEEEccCCcccc----cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCC
Q 005734 140 SRLPSLKRLLLGNNKFEG----SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCAN 215 (680)
Q Consensus 140 ~~l~~L~~L~L~~N~l~g----~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~ 215 (680)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.++..-.. .+...+.....++.+++++|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~---------~L~~~L~~~~~L~~L~Ls~N~ 222 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE---------LLAAQLDRNRQLQELNVAYNG 222 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH---------HHHHHGGGCSCCCEEECCSSC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH---------HHHHHHhcCCCcCeEECCCCC
Confidence 346789999999998864 3455567888899999999987642111 001123344567788888888
Q ss_pred CCCCc
Q 005734 216 LPGSS 220 (680)
Q Consensus 216 l~~~~ 220 (680)
++...
T Consensus 223 i~~~g 227 (372)
T 3un9_A 223 AGDTA 227 (372)
T ss_dssp CCHHH
T ss_pred CCHHH
Confidence 87543
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.2e-09 Score=111.91 Aligned_cols=140 Identities=19% Similarity=0.116 Sum_probs=103.6
Q ss_pred CcEeEEEcCCCCCcccCCccc-CCCCCCCEEEccCccCcccCCccc-----CCCCCCCEEEccCCcCCc----cCccccC
Q 005734 71 GKVQMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKEL-----GELTKLELLDLSNNKLSG----IIPVEIS 140 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g----~~p~~~~ 140 (680)
.+++.|+|++|.++..-...+ ..+++|+.|+|++|.|+..-...+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999975433333 345689999999999975433443 356899999999999974 2455567
Q ss_pred CCCCCcEEEccCCcccc----cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCC
Q 005734 141 RLPSLKRLLLGNNKFEG----SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANL 216 (680)
Q Consensus 141 ~l~~L~~L~L~~N~l~g----~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l 216 (680)
.+++|++|+|++|.++. .++..+...++|+.|+|++|.++..-... +...+.....+..+++++|.+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~---------l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA---------LARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH---------HHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH---------HHHHHHhCCCCCEEeccCCCC
Confidence 89999999999999975 34566788899999999999987532210 001233345678899999998
Q ss_pred CCC
Q 005734 217 PGS 219 (680)
Q Consensus 217 ~~~ 219 (680)
+..
T Consensus 252 ~~~ 254 (372)
T 3un9_A 252 SSE 254 (372)
T ss_dssp CHH
T ss_pred CHH
Confidence 753
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.55 E-value=3.6e-09 Score=106.15 Aligned_cols=66 Identities=29% Similarity=0.374 Sum_probs=37.4
Q ss_pred CCCCCCEEEccCCcCCc--cCccccCCCCCCcEEEccCCcccccCChhhcCCC--CCCeeeccCcccccccC
Q 005734 117 ELTKLELLDLSNNKLSG--IIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFT--LLSELQFDDYLTSAEVA 184 (680)
Q Consensus 117 ~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~--~L~~L~l~~N~~~g~~p 184 (680)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+.|+|++|.+++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 45566666666666665 3444555566666666666666643 2233333 56666666666665544
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.37 E-value=2.5e-07 Score=92.70 Aligned_cols=81 Identities=23% Similarity=0.301 Sum_probs=68.0
Q ss_pred CCCCCCCEEEccCccCcc--cCCcccCCCCCCCEEEccCCcCCccCccccCCCC--CCcEEEccCCcccccCCh------
Q 005734 92 GKLSDLRFLVLQKNHFSG--VIPKELGELTKLELLDLSNNKLSGIIPVEISRLP--SLKRLLLGNNKFEGSIPL------ 161 (680)
Q Consensus 92 ~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~L~~N~l~g~~P~------ 161 (680)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 357899999999999998 5677788999999999999999965 3444455 999999999999988873
Q ss_pred -hhcCCCCCCeeec
Q 005734 162 -ELSRFTLLSELQF 174 (680)
Q Consensus 162 -~l~~l~~L~~L~l 174 (680)
.+..+++|+.||-
T Consensus 245 ~il~~~P~L~~LDg 258 (267)
T 3rw6_A 245 AIRERFPKLLRLDG 258 (267)
T ss_dssp HHHHHCTTCCEESS
T ss_pred HHHHHCcccCeECC
Confidence 3778899998863
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.30 E-value=3.1e-08 Score=111.92 Aligned_cols=136 Identities=8% Similarity=0.025 Sum_probs=85.6
Q ss_pred CcEeEEEcCC-----------CCCccc-CCcccCCCCCCCEEEccCccCcccCCcccCC-CCCCCEEEcc----CCcCCc
Q 005734 71 GKVQMLDMKE-----------RSLEGT-LAPDLGKLSDLRFLVLQKNHFSGVIPKELGE-LTKLELLDLS----NNKLSG 133 (680)
Q Consensus 71 ~~l~~L~l~~-----------~~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~-l~~L~~L~Ls----~N~l~g 133 (680)
++++.|++++ +.+++. ++.-...+++|++|+++.|.+++..+..++. +++|+.|+|+ .|.+++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 5688888883 555543 2222345778888888888887766666665 7788888885 667775
Q ss_pred c-----CccccCCCCCCcEEEccCC--cccccCChhhc-CCCCCCeeeccCcccccc-cCCccccccccCCcccccCCCC
Q 005734 134 I-----IPVEISRLPSLKRLLLGNN--KFEGSIPLELS-RFTLLSELQFDDYLTSAE-VAGIRSVNRKFGQYGFKIGEDS 204 (680)
Q Consensus 134 ~-----~p~~~~~l~~L~~L~L~~N--~l~g~~P~~l~-~l~~L~~L~l~~N~~~g~-~p~~~~~~~~~~~~~~~~~~~~ 204 (680)
. ++..+..+++|+.|+|+++ .+++..+..++ .+++|+.|++++|.+++. ++. .+..+.
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-------------~~~~~~ 488 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME-------------FSRGCP 488 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH-------------HHTCCT
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH-------------HHhcCc
Confidence 3 3444566778888888643 35555555554 367788888887776642 221 123345
Q ss_pred CCcccCCCCCCCCCC
Q 005734 205 LHTNGDHSCANLPGS 219 (680)
Q Consensus 205 ~~~~l~~s~n~l~~~ 219 (680)
.++.+++++|++++.
T Consensus 489 ~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 489 NLQKLEMRGCCFSER 503 (592)
T ss_dssp TCCEEEEESCCCBHH
T ss_pred ccCeeeccCCCCcHH
Confidence 566677777776543
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=5.5e-06 Score=85.30 Aligned_cols=136 Identities=11% Similarity=0.045 Sum_probs=92.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC---cccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK---NFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lV~ 465 (680)
..++.|....||+. |..++||+-. . ......+.+|.++|..+++. .+.+.++++..... ..++||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g-~~~~v~ 92 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--S-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG-NPFVGY 92 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--S-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS-CEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--C-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC-ceEEEE
Confidence 45678888899987 4567777632 1 12345788999999999753 35566777753222 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE-------------------------------------- 507 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~-------------------------------------- 507 (680)
||+++.++.+... ..++..++..++.++++.|+.||+.
T Consensus 93 e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 93 RKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp ECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred eccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999988876321 1234455555555555555555532
Q ss_pred -------------------CCCCeeecCCCCCCeeecC---CCC-eEEcccccccc
Q 005734 508 -------------------LNPPVAHSNLSSHCIYLTD---DYA-AKVAEICFTTI 540 (680)
Q Consensus 508 -------------------~~~~ivHrDlKp~NILld~---~~~-~ki~DFGla~~ 540 (680)
..+.++|+|+++.||++++ ++. ..|.||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2345799999999999987 455 48999998765
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=5e-06 Score=83.77 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=92.7
Q ss_pred cccCCCCCC-eEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGC-TIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g-~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+..|..+ .||+-... ++..+.||+-... ...++.+|...|+.+. +--+.++++++.+++ ..++||
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvm 99 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS--------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLT 99 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH--------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC--------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEE
Confidence 445555555 69998765 4567888875421 2346788999988874 334667889988776 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE-------------------------------------- 507 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~-------------------------------------- 507 (680)
|++++.++.+..... ...+..++.++++.|+-||..
T Consensus 100 e~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (272)
T 4gkh_A 100 TAIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNG 173 (272)
T ss_dssp ECCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTT
T ss_pred EeeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccc
Confidence 999998877654211 112334455555555555531
Q ss_pred -----------------CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 508 -----------------LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 508 -----------------~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
..+.++|+|+.+.||+++++..+-|.||+.+..
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 174 WPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112379999999999999887778999988764
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.20 E-value=3.3e-06 Score=87.85 Aligned_cols=57 Identities=11% Similarity=0.252 Sum_probs=39.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccC
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN 128 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 128 (680)
.+++.|+|+. ++...-+..|.++++|+.|++++|.+...-+..|..+.++..+.++.
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 5788888888 77755556788888888888888887655555566555555554443
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.18 E-value=3.4e-07 Score=87.03 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=67.6
Q ss_pred CCcEeEEEcCCC-CCccc----CCcccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCCcc----Cc
Q 005734 70 NGKVQMLDMKER-SLEGT----LAPDLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGI----IP 136 (680)
Q Consensus 70 ~~~l~~L~l~~~-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 136 (680)
...++.|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.++.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 456777777777 66532 334455566777777777777532 233344556677777777777642 34
Q ss_pred cccCCCCCCcEEEc--cCCccccc----CChhhcCCCCCCeeeccCcccc
Q 005734 137 VEISRLPSLKRLLL--GNNKFEGS----IPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 137 ~~~~~l~~L~~L~L--~~N~l~g~----~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
..+...++|++|+| ++|.+... +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 45566667777777 66776542 3334455566777777766553
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.13 E-value=5.5e-06 Score=86.18 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=57.9
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCC-EEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLE-LLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|+|++|+++..-+..|.++++|+.|+|.+| +...-+..|.++++|+ .++|++ +++..-+..|.+|++|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 35666666666665444445666666666666665 5544445566666666 666665 45433345566666666666
Q ss_pred ccCCcccccCChhhcCCCCCCeee
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQ 173 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~ 173 (680)
+++|+++..-+..|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 666666543344566666666554
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.13 E-value=5.7e-07 Score=101.51 Aligned_cols=105 Identities=14% Similarity=0.142 Sum_probs=83.8
Q ss_pred cEeEEEcCCCC-Ccc-cCCcccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCC----ccCccccCC
Q 005734 72 KVQMLDMKERS-LEG-TLAPDLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLS----GIIPVEISR 141 (680)
Q Consensus 72 ~l~~L~l~~~~-l~g-~~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~----g~~p~~~~~ 141 (680)
+++.|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+..+++|+.|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 221 1223334789999999999998765 4445567899999999999997 345556678
Q ss_pred CCCCcEEEccCCcccccCChhhcCCCCCCeeeccCc
Q 005734 142 LPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
+++|+.|++++|.+.+ +|..+..+++|+.|+++.+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 9999999999999986 7888999999999999864
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.5e-05 Score=83.79 Aligned_cols=149 Identities=6% Similarity=0.028 Sum_probs=88.0
Q ss_pred ccc-CCCCCCeEEEEEeC-------CCCEEEEEEeeeccc-hhhHHHHHHHHHHHHHHHHcCC-C--CcccceeeEEecC
Q 005734 389 NII-DTQSGCTIYKGTLS-------SGVEIAVAATAITSS-KDWLKSQEMAYRKQVDTLSRIN-H--KNFVNLIGYCEDD 456 (680)
Q Consensus 389 ~~i-G~G~~g~Vyk~~~~-------~g~~vaVK~~~~~~~-~~~~~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~ 456 (680)
+.| +.|....+|+.... ++..+++|....... ... ....+.+|+++++.++ + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~---~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~ 102 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF---PTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG 102 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSS---SCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccC---chhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence 456 78888899998765 256778876543210 000 0124667788887774 2 3467788887654
Q ss_pred CC-CceEEEEEecCCCChhhhhcc----CCCCCCCHHHHHHHHHHHHHHH------------------------------
Q 005734 457 EP-FNRMMVFEYAPNGTVFEHLHI----KEMDHLDWNARMRIIMGTAYCL------------------------------ 501 (680)
Q Consensus 457 ~~-~~~~lV~ey~~~GsL~~~l~~----~~~~~l~~~~rl~ia~~ia~gL------------------------------ 501 (680)
.. ...++||||+++..+.+.+.. .....++..++..++.++++.|
T Consensus 103 ~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (357)
T 3ats_A 103 DVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHF 182 (357)
T ss_dssp TTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHH
T ss_pred CccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHH
Confidence 21 135899999998776543200 0000122222333333333333
Q ss_pred ------------------------HHHhcCC-------CCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 502 ------------------------QYMHHEL-------NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 502 ------------------------~yLH~~~-------~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+|.... .+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 183 NWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred HHHHHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 3332211 35789999999999999654578999998764
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.86 E-value=5.9e-07 Score=101.36 Aligned_cols=86 Identities=10% Similarity=0.054 Sum_probs=38.7
Q ss_pred CCCCCEEEccCccCcccCCcccC-CCCCCCEEEcc--C----CcCCcc-----CccccCCCCCCcEEEccCCcccccCCh
Q 005734 94 LSDLRFLVLQKNHFSGVIPKELG-ELTKLELLDLS--N----NKLSGI-----IPVEISRLPSLKRLLLGNNKFEGSIPL 161 (680)
Q Consensus 94 l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls--~----N~l~g~-----~p~~~~~l~~L~~L~L~~N~l~g~~P~ 161 (680)
+++|+.|.+..|.+++..+..+. .+++|+.|+|+ + |.+++. ++..+..+++|+.|+|++ .+++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 45555555555555544333333 35555555555 2 333311 111133445555555544 33333333
Q ss_pred hhcC-CCCCCeeeccCcccc
Q 005734 162 ELSR-FTLLSELQFDDYLTS 180 (680)
Q Consensus 162 ~l~~-l~~L~~L~l~~N~~~ 180 (680)
.++. +++|+.|++++|.++
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~ 469 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDS 469 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSS
T ss_pred HHHHhchhccEeeccCCCCc
Confidence 3333 445555555555443
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=1.6e-06 Score=82.37 Aligned_cols=122 Identities=15% Similarity=0.056 Sum_probs=89.5
Q ss_pred CCcccCCCCCCCEEEccCc-cCccc----CCcccCCCCCCCEEEccCCcCCcc----CccccCCCCCCcEEEccCCcccc
Q 005734 87 LAPDLGKLSDLRFLVLQKN-HFSGV----IPKELGELTKLELLDLSNNKLSGI----IPVEISRLPSLKRLLLGNNKFEG 157 (680)
Q Consensus 87 ~p~~~~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g 157 (680)
+...+...+.|+.|+|++| .|... +...+...++|++|+|++|.+... +...+...++|++|+|++|.+..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4445677899999999999 88642 445567789999999999999742 34455667899999999999985
Q ss_pred c----CChhhcCCCCCCeeec--cCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 158 S----IPLELSRFTLLSELQF--DDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 158 ~----~P~~l~~l~~L~~L~l--~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
. +...+...++|++|+| ++|.++..-... + ...+.....+..++++.|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~------l---~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEME------I---ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH------H---HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH------H---HHHHHhCCCcCEEeccCCCCC
Confidence 3 5567788889999999 889886532210 0 112333456778889888764
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=97.80 E-value=1.9e-06 Score=97.20 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=65.0
Q ss_pred CcEeEEEcCCCCCcccCCcccC-CCCCCCEEEccCc-cCccc-CCcccCCCCCCCEEEccCCcCCccCcccc----CCCC
Q 005734 71 GKVQMLDMKERSLEGTLAPDLG-KLSDLRFLVLQKN-HFSGV-IPKELGELTKLELLDLSNNKLSGIIPVEI----SRLP 143 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~----~~l~ 143 (680)
++++.|+|+++.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4677777777777665555554 5677777777777 44432 34444467777777777777665443333 2556
Q ss_pred CCcEEEccCCc--ccc-cCChhhcCCCCCCeeeccCc
Q 005734 144 SLKRLLLGNNK--FEG-SIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 144 ~L~~L~L~~N~--l~g-~~P~~l~~l~~L~~L~l~~N 177 (680)
+|+.|++++|. ++. .++..+.++++|++|++++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 77777777775 221 11222345677777777776
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.68 E-value=1e-05 Score=85.23 Aligned_cols=40 Identities=13% Similarity=0.141 Sum_probs=19.6
Q ss_pred CCCCcEEEccCCcccccCChhhc---CCCCCCeeeccCccccc
Q 005734 142 LPSLKRLLLGNNKFEGSIPLELS---RFTLLSELQFDDYLTSA 181 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~~P~~l~---~l~~L~~L~l~~N~~~g 181 (680)
+++|++|+|.+|.+.+..+..+. .+++|++|+|+.|.++.
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 45555555555555433322222 34555555555555443
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=9.9e-05 Score=78.77 Aligned_cols=79 Identities=10% Similarity=-0.053 Sum_probs=47.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccc-hhhH-HHHHHHHHHHHHHHHcCCC--Cccc-ceeeEEecCCCCceE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSS-KDWL-KSQEMAYRKQVDTLSRINH--KNFV-NLIGYCEDDEPFNRM 462 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~-~~~~-~~~~~~f~~E~~~l~~l~H--~niv-~l~g~~~~~~~~~~~ 462 (680)
+.+|.|..+.||+++.. ++..++||....... .... ......+..|.+++..+.. +..+ +++.+. .+ ..+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~~ 111 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MAV 111 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TTE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--ccE
Confidence 67899999999999864 467899997643211 0000 0012345678888887742 4444 455443 33 348
Q ss_pred EEEEecCCC
Q 005734 463 MVFEYAPNG 471 (680)
Q Consensus 463 lV~ey~~~G 471 (680)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999764
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00038 Score=71.52 Aligned_cols=136 Identities=15% Similarity=0.174 Sum_probs=89.6
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC---CCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN---HKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.|+.|....+|+.... +..++||+.... ....|..|.+.|+.+. ...+.++++++...+ ..++||
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvm 110 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLL 110 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEE
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEE
Confidence 56789999999998864 567888876422 1345788888888874 356888888887665 679999
Q ss_pred EecCCCChhh-----------hhccCCC-C-------------------CCCHHH-----HHHHHHH-------------
Q 005734 466 EYAPNGTVFE-----------HLHIKEM-D-------------------HLDWNA-----RMRIIMG------------- 496 (680)
Q Consensus 466 ey~~~GsL~~-----------~l~~~~~-~-------------------~l~~~~-----rl~ia~~------------- 496 (680)
||+++..+.. .||.... . .-+|.. |+.-..+
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 9999876532 1332111 0 125653 2221111
Q ss_pred -HH-HHHHHHh-cCCCCCeeecCCCCCCeeecCCCCeEEcccc
Q 005734 497 -TA-YCLQYMH-HELNPPVAHSNLSSHCIYLTDDYAAKVAEIC 536 (680)
Q Consensus 497 -ia-~gL~yLH-~~~~~~ivHrDlKp~NILld~~~~~ki~DFG 536 (680)
+. +....|. ....|.++|+|+.+.|++++.++ +.|.||.
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 1123343 23467899999999999999887 8899974
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00029 Score=73.12 Aligned_cols=44 Identities=9% Similarity=0.117 Sum_probs=34.2
Q ss_pred HHHHHHHHhc----------CCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 497 TAYCLQYMHH----------ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 497 ia~gL~yLH~----------~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+.+++++|+. ...+.++|||+++.||+++.+..+.|.||+.+..
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 3446677763 1245899999999999998888899999997653
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.57 E-value=1.5e-05 Score=83.78 Aligned_cols=110 Identities=14% Similarity=0.213 Sum_probs=71.2
Q ss_pred cEeEEEcCCCCCcccCCcccC--CCCCCCEEEccC--ccCccc-----CCccc--CCCCCCCEEEccCCcCCccCcccc-
Q 005734 72 KVQMLDMKERSLEGTLAPDLG--KLSDLRFLVLQK--NHFSGV-----IPKEL--GELTKLELLDLSNNKLSGIIPVEI- 139 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~--~l~~L~~L~L~~--N~l~g~-----~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~- 139 (680)
+|+.|+|..+++.......++ .+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.+.+..+..+
T Consensus 194 ~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la 273 (362)
T 2ra8_A 194 NLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFL 273 (362)
T ss_dssp TCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHH
T ss_pred CCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHH
Confidence 445555544444322222232 678888888753 222111 11122 247899999999999875444333
Q ss_pred --CCCCCCcEEEccCCccccc----CChhhcCCCCCCeeeccCccccc
Q 005734 140 --SRLPSLKRLLLGNNKFEGS----IPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 140 --~~l~~L~~L~L~~N~l~g~----~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
..+++|++|+|+.|.+.+. ++..+.++++|+.|++++|.++.
T Consensus 274 ~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 274 ESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred hCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 3588999999999999863 45555678999999999997764
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00019 Score=72.94 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=51.7
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC---cccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK---NFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lV~ 465 (680)
..+|.|..+.||+.++.||+.+.||+-...... ....|..|.+.|+.+.-. -+.+++++ +. .++||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~----~~lv~ 89 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPA-----LDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD----RTLAM 89 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-----CTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET----TEEEE
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-----hhhHHHHHHHHHHHHHhhCCCCcceEEec--cC----ceEEE
Confidence 567899999999999999999999975432211 122477898888887422 23444443 22 27999
Q ss_pred EecCCCChh
Q 005734 466 EYAPNGTVF 474 (680)
Q Consensus 466 ey~~~GsL~ 474 (680)
||++.+...
T Consensus 90 e~l~~~~~~ 98 (288)
T 3f7w_A 90 EWVDERPPT 98 (288)
T ss_dssp ECCCCCCCC
T ss_pred EeecccCCC
Confidence 999876543
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0013 Score=70.15 Aligned_cols=103 Identities=16% Similarity=0.188 Sum_probs=70.0
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.+.|..+ +...-...|.++++|+.+++..| ++..-...|.+ .+|+.++|. |.++..-+..|.+|++|+.+++
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEe
Confidence 46778888744 66555567888888888888865 55344455666 678888884 4455344567778888888888
Q ss_pred cCCccc-----ccCChhhcCCCCCCeeeccCc
Q 005734 151 GNNKFE-----GSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 151 ~~N~l~-----g~~P~~l~~l~~L~~L~l~~N 177 (680)
.+|.+. ..-+..|.+|++|+.+.|.++
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~ 310 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPES 310 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCCc
Confidence 777664 223356778888888877643
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0016 Score=69.83 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=27.8
Q ss_pred CCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 509 ~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
.+.++|||+++.||+++++. ++|.||+.+...
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 45899999999999998876 999999887654
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0016 Score=69.38 Aligned_cols=135 Identities=10% Similarity=0.073 Sum_probs=95.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCC-----ccCccccCCCCCC
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLS-----GIIPVEISRLPSL 145 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~~L 145 (680)
.+|+.++|..+ +...-...|.+ .+|+.+.| .|.++..-+..|.++++|+.+++.+|.+. ..-+..|.+|++|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 46888888864 55344446666 78999999 45566555788999999999999998875 2345678899999
Q ss_pred cEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhh
Q 005734 146 KRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHL 224 (680)
Q Consensus 146 ~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~ 224 (680)
+.++|.+ .++-.-...|.+|++|+.+.|.+|. + .|+. ..|..+ .+..+.++.|.++......|
T Consensus 303 ~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~l-~-~I~~------------~aF~~~-~L~~l~l~~n~~~~l~~~~F 365 (401)
T 4fdw_A 303 ARFEIPE-SIRILGQGLLGGNRKVTQLTIPANV-T-QINF------------SAFNNT-GIKEVKVEGTTPPQVFEKVW 365 (401)
T ss_dssp CEECCCT-TCCEECTTTTTTCCSCCEEEECTTC-C-EECT------------TSSSSS-CCCEEEECCSSCCBCCCSSC
T ss_pred CeEEeCC-ceEEEhhhhhcCCCCccEEEECccc-c-EEcH------------HhCCCC-CCCEEEEcCCCCcccccccc
Confidence 9999984 4664445678899999999987662 1 1221 245555 67778888887766544333
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.003 Score=65.33 Aligned_cols=33 Identities=6% Similarity=0.112 Sum_probs=28.0
Q ss_pred CCCeeecCCCCCCeeecCC----CCeEEccccccccc
Q 005734 509 NPPVAHSNLSSHCIYLTDD----YAAKVAEICFTTIA 541 (680)
Q Consensus 509 ~~~ivHrDlKp~NILld~~----~~~ki~DFGla~~~ 541 (680)
.+.++|||+.+.||+++.+ ..+.|.||+.+...
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 4579999999999999875 67899999987654
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00052 Score=63.76 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=41.0
Q ss_pred CCCEEEccCccCcccCCcccCCCCCCCEEEccCCc-CCccCccccCCC----CCCcEEEccCCc-ccccCChhhcCCCCC
Q 005734 96 DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNK-LSGIIPVEISRL----PSLKRLLLGNNK-FEGSIPLELSRFTLL 169 (680)
Q Consensus 96 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~L~~N~-l~g~~P~~l~~l~~L 169 (680)
.|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. ++..-=..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555543322334556666666666653 443222223332 356666666653 443222235566666
Q ss_pred CeeeccCc
Q 005734 170 SELQFDDY 177 (680)
Q Consensus 170 ~~L~l~~N 177 (680)
+.|++++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666654
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0035 Score=64.36 Aligned_cols=142 Identities=8% Similarity=0.067 Sum_probs=77.2
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc--ccceeeEE------ecCCCCc
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN--FVNLIGYC------EDDEPFN 460 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~------~~~~~~~ 460 (680)
+.|+.|....+|+....+| .+++|...... ...++..|++++..++... +.+++... ...+ .
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-------~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g--~ 97 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV-------EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSG--R 97 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETT--E
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC-------CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECC--E
Confidence 4466777789999988766 46777765321 1123445666666653222 23333211 1112 4
Q ss_pred eEEEEEecCCCChhh--------------hhccC--C--CC------CCCHHHHHHH------------HHHHHHHHHHH
Q 005734 461 RMMVFEYAPNGTVFE--------------HLHIK--E--MD------HLDWNARMRI------------IMGTAYCLQYM 504 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~--------------~l~~~--~--~~------~l~~~~rl~i------------a~~ia~gL~yL 504 (680)
.+++++|+++..+.. .+|.. . .. ...|...+.- ...+.+.++++
T Consensus 98 ~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l 177 (322)
T 2ppq_A 98 PAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYL 177 (322)
T ss_dssp EEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 589999998865421 12211 0 00 0124432211 11244455565
Q ss_pred hcC----CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 505 HHE----LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 505 H~~----~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+.. ..+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 178 ~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 178 AAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 532 234789999999999999876668999987653
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00047 Score=64.04 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=64.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCcc-CcccCCcccCCC----CCCCEEEccCCc-CCccCccccCCCCC
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNH-FSGVIPKELGEL----TKLELLDLSNNK-LSGIIPVEISRLPS 144 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 144 (680)
-+++.||++++.++..--..+..+++|+.|+|+++. |+..-=..+..+ ++|++|+|+++. ++..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876544567899999999999985 664323345554 479999999974 77433345778999
Q ss_pred CcEEEccCCc
Q 005734 145 LKRLLLGNNK 154 (680)
Q Consensus 145 L~~L~L~~N~ 154 (680)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999874
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0023 Score=65.25 Aligned_cols=30 Identities=3% Similarity=0.046 Sum_probs=25.0
Q ss_pred CCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 510 PPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 510 ~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
+.++|+|+.+.||+ .+++.+.+.||..+..
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 45899999999999 5666789999987654
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0049 Score=66.29 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=46.9
Q ss_pred cccCCCCCCeEEEEEeCC--------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLSS--------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~ 459 (680)
..|+.|....||+...++ +..+.+|+...... ...+.+|..++..+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~-------~~~li~E~~~l~~L~~~g~~P~l~~~~~--~-- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-------ESHLVAESVIFTLLSERHLGPKLYGIFS--G-- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-------HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc-------HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--
Confidence 567788888999998763 46788887632110 1234578888887753344 56666543 2
Q ss_pred ceEEEEEecCCCCh
Q 005734 460 NRMMVFEYAPNGTV 473 (680)
Q Consensus 460 ~~~lV~ey~~~GsL 473 (680)
.+|+||+++.++
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986444
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.038 Score=56.59 Aligned_cols=140 Identities=7% Similarity=0.020 Sum_probs=77.3
Q ss_pred ccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCC--cccceeeE-----EecCCCCceE
Q 005734 390 IIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK--NFVNLIGY-----CEDDEPFNRM 462 (680)
Q Consensus 390 ~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~-----~~~~~~~~~~ 462 (680)
.++ |....||+....+|+.+++|....... ....+..|..++..++.. .+.+++.. ....+ ..+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~------~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g--~~~ 103 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW------TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYF 103 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS------CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEE
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC------CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC--EEE
Confidence 355 777899998887787788888752211 122455677777666322 24445443 11122 457
Q ss_pred EEEEecCCCChhh-----h---------hccC-------CCCCCCHHHH----HHH---------------HHHHHHHHH
Q 005734 463 MVFEYAPNGTVFE-----H---------LHIK-------EMDHLDWNAR----MRI---------------IMGTAYCLQ 502 (680)
Q Consensus 463 lV~ey~~~GsL~~-----~---------l~~~-------~~~~l~~~~r----l~i---------------a~~ia~gL~ 502 (680)
+|+||+++..+.. . +|.. .....++... ..+ ...+.+.++
T Consensus 104 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 183 (328)
T 1zyl_A 104 AVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIA 183 (328)
T ss_dssp EEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHH
Confidence 8999998754421 0 1210 0112333211 001 011112233
Q ss_pred HHhc----CCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 503 YMHH----ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 503 yLH~----~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+.. ...+.++|||+++.||+++ + .+.|.||+.+..
T Consensus 184 ~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 184 AVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 3321 1234689999999999999 4 899999987654
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0053 Score=54.07 Aligned_cols=53 Identities=28% Similarity=0.389 Sum_probs=20.6
Q ss_pred EEEcCCCCCc-ccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCC
Q 005734 75 MLDMKERSLE-GTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNN 129 (680)
Q Consensus 75 ~L~l~~~~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 129 (680)
.++.++++|+ ..+|..+. .+|++|+|++|+|+..-+..|..+++|+.|+|++|
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 65 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGAN 65 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCC
Confidence 4445555554 23333211 23444444444444222223333333443333333
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.011 Score=62.24 Aligned_cols=140 Identities=9% Similarity=0.094 Sum_probs=79.4
Q ss_pred cccCCCCCCeEEEEEeCC--------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCc-ccceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLSS--------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKN-FVNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~ 459 (680)
+.+..|-...+|+...++ +..+.+|+-.... .....+.+|.++++.+.-.+ ..++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~------~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~-- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL------QGVDSLVLESVMFAILAERSLGPQLYGVFP--E-- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc------chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--
Confidence 456667778899998753 4678887642211 01234568888888774223 355666653 2
Q ss_pred ceEEEEEecCCCChhhh-----------------hccCC---CCCCC--HHHHHHHHHHHH-------------------
Q 005734 460 NRMMVFEYAPNGTVFEH-----------------LHIKE---MDHLD--WNARMRIIMGTA------------------- 498 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~-----------------l~~~~---~~~l~--~~~rl~ia~~ia------------------- 498 (680)
.+|+||+++.+|..- ||... ..... |.+..++..++.
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 389999988665421 12111 11222 444444443332
Q ss_pred HHHHHHh----c-CCCCCeeecCCCCCCeeecCC----CCeEEcccccccc
Q 005734 499 YCLQYMH----H-ELNPPVAHSNLSSHCIYLTDD----YAAKVAEICFTTI 540 (680)
Q Consensus 499 ~gL~yLH----~-~~~~~ivHrDlKp~NILld~~----~~~ki~DFGla~~ 540 (680)
+.+.+|. . .....++|+|+.+.||+++++ +.+.+.||..+..
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1233332 2 123468999999999999876 6899999987754
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0082 Score=52.83 Aligned_cols=57 Identities=21% Similarity=0.385 Sum_probs=46.7
Q ss_pred CEEEccCccCc-ccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCccc
Q 005734 98 RFLVLQKNHFS-GVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFE 156 (680)
Q Consensus 98 ~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 156 (680)
..++.+++.|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47889999986 35676543 47999999999999655566788999999999999886
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0081 Score=63.07 Aligned_cols=73 Identities=5% Similarity=0.034 Sum_probs=41.5
Q ss_pred cccCCCCCCeEEEEEeCC---------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCC
Q 005734 389 NIIDTQSGCTIYKGTLSS---------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEP 458 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~---------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~ 458 (680)
..++.|....+|+....+ +..+.+|+..... .. ..+...|.+++..+...++ .++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~-----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~- 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DE-----LYNTISEFEVYKTMSKYKIAPQLLNTF--NG- 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GG-----TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT-
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cc-----eecHHHHHHHHHHHHhcCCCCceEEec--CC-
Confidence 466778888999998764 2577777653221 11 0123567777777743343 3566543 22
Q ss_pred CceEEEEEecCCCCh
Q 005734 459 FNRMMVFEYAPNGTV 473 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL 473 (680)
++||||+++..+
T Consensus 110 ---~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 ---GRIEEWLYGDPL 121 (369)
T ss_dssp ---EEEEECCCSEEC
T ss_pred ---cEEEEEecCCcC
Confidence 689999987544
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.031 Score=60.38 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=45.8
Q ss_pred cccCCCCCCeEEEEEeCC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTLSS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~lV~e 466 (680)
..|+.|-...+|+....+ +..+.+|+........ -+-.+|..++..+...++ .++++++. + .+|+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~------idR~~E~~vl~~L~~~gl~P~ll~~~~--~----G~v~e 181 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI------INREREKKISCILYNKNIAKKIYVFFT--N----GRIEE 181 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC------SCHHHHHHHHHHHTTSSSBCCEEEEET--T----EEEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh------cCHHHHHHHHHHHHhcCCCCCEEEEeC--C----eEEEE
Confidence 567788888999998875 4677787653221110 012478888888865555 45777662 2 35999
Q ss_pred ecCCCCh
Q 005734 467 YAPNGTV 473 (680)
Q Consensus 467 y~~~GsL 473 (680)
|+++.+|
T Consensus 182 ~I~G~~l 188 (458)
T 2qg7_A 182 FMDGYAL 188 (458)
T ss_dssp CCCSEEC
T ss_pred eeCCccC
Confidence 9987554
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.037 Score=57.31 Aligned_cols=33 Identities=9% Similarity=0.144 Sum_probs=28.2
Q ss_pred CCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 509 ~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
.+.++|+|+.+.||++++++.+.|.||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 357999999999999998888999999876543
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0033 Score=59.42 Aligned_cols=84 Identities=11% Similarity=0.131 Sum_probs=39.9
Q ss_pred CCcEeEEEcCCC-CCcc----cCCcccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCCcc----Cc
Q 005734 70 NGKVQMLDMKER-SLEG----TLAPDLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGI----IP 136 (680)
Q Consensus 70 ~~~l~~L~l~~~-~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 136 (680)
+..++.|+|++| .+.. .+-..+..-+.|+.|+|++|.|... +-..+..-+.|+.|+|++|.|+.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345666666654 5432 1223344445566666666666421 112233345566666666666521 11
Q ss_pred cccCCCCCCcEEEccCC
Q 005734 137 VEISRLPSLKRLLLGNN 153 (680)
Q Consensus 137 ~~~~~l~~L~~L~L~~N 153 (680)
..+..-+.|+.|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 12333344555555543
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.078 Score=55.52 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=69.5
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.+.+..+ +...-...+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|..|.+|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 4566666443 33333446677888888888765 55444567778888888888654 442334567788888888888
Q ss_pred CCcccccCChhhcCCCCCCeeeccCc
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
++.++..-...|.++++|+.+.|.++
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc
Confidence 88777433456788888888887654
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.12 Score=54.62 Aligned_cols=84 Identities=10% Similarity=0.103 Sum_probs=42.4
Q ss_pred ccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCC
Q 005734 90 DLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLL 169 (680)
Q Consensus 90 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L 169 (680)
.|.++..|+.+.+.++... .-...|.++.+|+.+.+. +.++..-...|.+|.+|+.+++..| ++-.-...|.+|++|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 4555666666666544332 333455556666666664 2333222334555666666666543 332222345566666
Q ss_pred CeeeccC
Q 005734 170 SELQFDD 176 (680)
Q Consensus 170 ~~L~l~~ 176 (680)
+.+.+.+
T Consensus 337 ~~i~ip~ 343 (394)
T 4gt6_A 337 ERIAIPS 343 (394)
T ss_dssp CEEEECT
T ss_pred CEEEECc
Confidence 6665543
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=94.77 E-value=0.055 Score=57.17 Aligned_cols=105 Identities=10% Similarity=0.158 Sum_probs=78.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.+.+..+-.. .-...|.+++.|+.+.+. +.+...-...|.++.+|+.++|..| ++..-...|.+|.+|+.+.+
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 46778888765432 334568889999999996 4565455577899999999999865 55344567899999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLT 179 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~ 179 (680)
..+ ++-.-...|.+|++|+.+++.+|..
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 765 5522245799999999999988754
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=94.29 E-value=0.019 Score=54.20 Aligned_cols=87 Identities=17% Similarity=0.148 Sum_probs=60.8
Q ss_pred cCCCCCCCEEEccCc-cCcc----cCCcccCCCCCCCEEEccCCcCCcc----CccccCCCCCCcEEEccCCccccc---
Q 005734 91 LGKLSDLRFLVLQKN-HFSG----VIPKELGELTKLELLDLSNNKLSGI----IPVEISRLPSLKRLLLGNNKFEGS--- 158 (680)
Q Consensus 91 ~~~l~~L~~L~L~~N-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~--- 158 (680)
+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|++... +-..+..-+.|+.|+|++|.+...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445578999999985 7753 1334566778899999999998732 222344457899999999998742
Q ss_pred -CChhhcCCCCCCeeeccCc
Q 005734 159 -IPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 159 -~P~~l~~l~~L~~L~l~~N 177 (680)
+-..+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 3334555567999998765
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=93.94 E-value=0.077 Score=56.01 Aligned_cols=86 Identities=13% Similarity=0.021 Sum_probs=67.9
Q ss_pred cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCC
Q 005734 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTL 168 (680)
Q Consensus 89 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~ 168 (680)
..+..+.+|+.+.+.++ +...-...|.++++|+.++|.++ ++..-...|.+|.+|+.+++..| ++-.-...|.++++
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 35778899999999765 65455678999999999999765 66344567899999999999877 66333457999999
Q ss_pred CCeeeccCc
Q 005734 169 LSELQFDDY 177 (680)
Q Consensus 169 L~~L~l~~N 177 (680)
|+.+++.++
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 999998765
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=93.47 E-value=0.5 Score=49.24 Aligned_cols=90 Identities=13% Similarity=0.119 Sum_probs=62.3
Q ss_pred CcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCC
Q 005734 88 APDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFT 167 (680)
Q Consensus 88 p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~ 167 (680)
...+.....|+.+.+..+ +...-...+.++.+|+.+.+..+ ++..-...+.++.+|+.+.+..+ +...-...|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 345666778888888655 33344567788889999988776 55344556778888998888654 4422334678888
Q ss_pred CCCeeeccCcccc
Q 005734 168 LLSELQFDDYLTS 180 (680)
Q Consensus 168 ~L~~L~l~~N~~~ 180 (680)
+|+.+.+.++.++
T Consensus 287 ~L~~i~l~~~~i~ 299 (379)
T 4h09_A 287 NLTKVVMDNSAIE 299 (379)
T ss_dssp TCCEEEECCTTCC
T ss_pred ccccccccccccc
Confidence 9999888776543
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=93.31 E-value=0.13 Score=54.13 Aligned_cols=100 Identities=15% Similarity=0.065 Sum_probs=72.6
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.+.+..+... .-...+..+..|+.+.+..+.+. ...+..+.+|+.+.+..+ ++..-...|.+|.+|+.+++.
T Consensus 254 ~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 3455555544322 33456778889999988776543 356888999999999876 653445678899999999997
Q ss_pred CCcccccCChhhcCCCCCCeeeccCc
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
++ ++-.-...|.++++|+.+.+..|
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc
Confidence 55 65333467899999999999766
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.33 E-value=0.1 Score=35.74 Aligned_cols=27 Identities=15% Similarity=0.194 Sum_probs=14.9
Q ss_pred EeehhHHHHHHHHHHHHHHHhhhcccc
Q 005734 325 FLIIPGLFAVLIIAAAAFFTCQTRAVR 351 (680)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (680)
++++++++++++++++.++++|||+.+
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred eehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 344555555555555556666665543
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=91.08 E-value=0.68 Score=44.03 Aligned_cols=162 Identities=15% Similarity=0.086 Sum_probs=82.4
Q ss_pred ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCccccc
Q 005734 472 TVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551 (680)
Q Consensus 472 sL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~~~~ 551 (680)
||.++|... +.+++..+.+.++.|.+.+|.-+-....+. .+=+-|..|++..+|.+...+ ..+.. .......
T Consensus 34 SL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~--~~i~~~~~i~l~~dG~V~f~~-~~s~~----~~~~~~~ 105 (229)
T 2yle_A 34 SLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPR--HRVRSAAQIRVWRDGAVTLAP-AADDA----GEPPPVA 105 (229)
T ss_dssp EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCC--CCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCC--ceecCCcceEEecCCceeccc-ccccc----cccCCCC
Confidence 788888643 458999999999999999987762110011 122346889999999888764 11110 0000111
Q ss_pred ccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcccc--ccHHHHHHHHhcCCCCcccccCcccCCCCHHH-HHHHHHHH
Q 005734 552 ENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKE--LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE-LEAICEVI 628 (680)
Q Consensus 552 ~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~-~~~~~~l~ 628 (680)
|+. .+...+.+.=|||+|+++|.-+-=..|-+.... ..+...+..+... ..-....|..+....++. -++
T Consensus 106 pe~-~~~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt~~-~~d~~~~DeG~~~~~eg~~d~~----- 178 (229)
T 2yle_A 106 GKL-GYSQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMANT-VEADGSNDEGYEAAEEGLGDED----- 178 (229)
T ss_dssp -CC-SSSSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHTTC-CC-------------------------
T ss_pred hhh-ccccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHHhc-cccccccccccccccccccccc-----
Confidence 111 122345677899999999998873333222111 2334444333322 111112222222100000 000
Q ss_pred HHccccCCCCCCCHHHHHHHHHH
Q 005734 629 KECIKTDLRQRPTMNDIIVQLRQ 651 (680)
Q Consensus 629 ~~C~~~~P~~RPtm~ev~~~L~~ 651 (680)
. ...+..|++.++|++.=..
T Consensus 179 -~--~~~~~~~~sl~~Vi~~C~~ 198 (229)
T 2yle_A 179 -E--KRKISAIRSYRDVMKLCAA 198 (229)
T ss_dssp -C--CSCCCCCCSHHHHHHHHHT
T ss_pred -c--cccccCcCCHHHHHHHHHh
Confidence 0 3467899999999876554
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=90.93 E-value=0.43 Score=50.43 Aligned_cols=29 Identities=10% Similarity=0.260 Sum_probs=24.2
Q ss_pred eeecCCCCCCeee------cCCCCeEEcccccccc
Q 005734 512 VAHSNLSSHCIYL------TDDYAAKVAEICFTTI 540 (680)
Q Consensus 512 ivHrDlKp~NILl------d~~~~~ki~DFGla~~ 540 (680)
++|+|+.+.|||+ +++..+++.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4566799999987754
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=90.67 E-value=0.66 Score=49.29 Aligned_cols=139 Identities=12% Similarity=0.128 Sum_probs=80.0
Q ss_pred cccCCCCCCeEEEEEeCC--------CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLSS--------GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~--------g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~ 459 (680)
..+..|-...+|+....+ +..+.+|+-...... .-+-.+|.++++.+.-.++ .++++.+ .+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~------~idR~~E~~~l~~L~~~gi~P~l~~~~--~~-- 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK------FYDSKVELDVFRYLSNINIAPNIIADF--PE-- 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C------CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch------hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--
Confidence 456677888999998763 567888775332111 0123467777777642233 4455533 22
Q ss_pred ceEEEEEecCCCChhhh-----------------hccC-----------CCCCCCHHHHHHHHHHH--------------
Q 005734 460 NRMMVFEYAPNGTVFEH-----------------LHIK-----------EMDHLDWNARMRIIMGT-------------- 497 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~-----------------l~~~-----------~~~~l~~~~rl~ia~~i-------------- 497 (680)
++|+||+++..|..- +|.. ...+--|.+..++..++
T Consensus 146 --~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~ 223 (424)
T 3mes_A 146 --GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKE 223 (424)
T ss_dssp --EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHH
T ss_pred --CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccc
Confidence 689999998664321 1110 11111244433333222
Q ss_pred -----HHHHHHHhc---------------------CCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 498 -----AYCLQYMHH---------------------ELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 498 -----a~gL~yLH~---------------------~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
...+.+|.. .....++|+|+.+.||+ ++++.+.+.||..+..
T Consensus 224 ~~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 224 LYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred cHHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 223334321 11236899999999999 8888899999987754
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.38 E-value=0.13 Score=35.16 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=15.1
Q ss_pred EeehhHHHHHHHHHHHHHHHhhhcccc
Q 005734 325 FLIIPGLFAVLIIAAAAFFTCQTRAVR 351 (680)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (680)
.+++++++++++++++.++++|||+.+
T Consensus 14 ~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 14 AGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred EeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 344555555555555556666665544
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=85.26 E-value=1.3 Score=42.03 Aligned_cols=116 Identities=10% Similarity=0.120 Sum_probs=77.6
Q ss_pred CCCcccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 005734 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHC 521 (680)
Q Consensus 442 ~H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~N 521 (680)
.||+.+.. ..-.+.+ -++..|-...+...+-. -..++-..|++++..|+.--.+++.. +|--|.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD----~v~~~y~~~~~~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD----SFQIHYDINDNHTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSS----EEEEEECCCTTSEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEccc----EEEEEEEcCcccCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888766 3333333 34444444333333322 12478899999999999887666643 677899999
Q ss_pred eeecCCCCeEEcccccccccCCCCCcccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCC
Q 005734 522 IYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYC 584 (680)
Q Consensus 522 ILld~~~~~ki~DFGla~~~~~~~~~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~ 584 (680)
+++|.++.+++.=.|+...+.+ ...+++.=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P--------------~~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP--------------LPVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC--------------CCCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCCC--------------CCCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998877544322 122222234467788999999998875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 680 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-37 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 7e-31 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 7e-31 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 4e-30 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-30 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 5e-30 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 5e-29 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 8e-29 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-28 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-28 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-28 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-28 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-28 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-27 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 5e-27 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 4e-26 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-25 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 6e-25 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-24 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-24 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-24 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-24 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-24 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-23 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-23 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-23 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-23 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-23 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-23 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-23 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 6e-23 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-22 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 2e-22 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-22 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-22 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-21 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-21 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-20 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-19 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 6e-19 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 3e-18 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-18 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 6e-18 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-17 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 3e-17 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 6e-17 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 6e-17 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 9e-17 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 9e-17 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-16 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 4e-16 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-16 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 7e-16 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-14 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-13 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-12 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-06 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-04 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-04 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 8e-13 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 1e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 8e-09 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 8e-07 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 8e-12 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 6e-11 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-10 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-09 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 8e-09 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 9e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 0.001 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 1e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 8e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 1e-06 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 2e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 6e-04 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 2e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 7e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 0.003 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 9e-06 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.003 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-05 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 3e-04 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.002 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 5e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 9e-05 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 2e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.002 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 3e-04 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 0.004 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 5e-04 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 0.002 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 0.002 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 0.003 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 4e-37
Identities = 55/275 (20%), Positives = 109/275 (39%), Gaps = 35/275 (12%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
T+YKG V + + + Q A++ +V L + H N + +GY +
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPT-----PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ 77
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
+V ++ +++ HLHI E + + I TA + Y+H + H +L
Sbjct: 78 LA---IVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 130
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPL--------------ADPE 563
S+ I+L +D K+ + T+ + S E L +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 564 TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEA 623
+++Y+FGI++ E+++G+LPY + + P L + N +A
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG--------RGYLSPDLSKVRSNCPKA 241
Query: 624 ICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPE 658
+ ++ EC+K +RP I+ + + P+
Sbjct: 242 MKRLMAECLKKKRDERPLFPQILASIELLARSLPK 276
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (301), Expect = 7e-31
Identities = 40/262 (15%), Positives = 97/262 (37%), Gaps = 35/262 (13%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
++ G + ++AV + + + + + + ++ H+ V L +
Sbjct: 28 EVWMGYYNGHTKVAVK----SLKQGSMSPDAF--LAEANLMKQLQHQRLVRLYAVVTQEP 81
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
+ ++ EY NG++ + L L N + + A + ++ H +L
Sbjct: 82 IY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDL 135
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA---------DPETNIYS 568
+ I ++D + K+A+ + + + + A +++++S
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 569 FGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEV 627
FGIL+ EI++ G++PY + + R +C E + ++
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP-------------EELYQL 242
Query: 628 IKECIKTDLRQRPTMNDIIVQL 649
++ C K RPT + + L
Sbjct: 243 MRLCWKERPEDRPTFDYLRSVL 264
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 7e-31
Identities = 46/289 (15%), Positives = 105/289 (36%), Gaps = 45/289 (15%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+++G G E+AV + + W + E + + H+N + I D
Sbjct: 18 EVWRGKWR-GEEVAVKIFSSREERSWFREAE------IYQTVMLRHENILGFIAADNKDN 70
Query: 458 P--FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL-----NP 510
+V +Y +G++F++L+ + +++ + TA L ++H E+ P
Sbjct: 71 GTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPL----------- 559
+AH +L S I + + +A++ + D N +
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187
Query: 560 -------ADPETNIYSFGILMLEIISGKLPYCEEKE-------LSIEKWAADYLNEPRNF 605
+ +IY+ G++ EI ++ L + + + +
Sbjct: 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 247
Query: 606 SCMIDPSLKSFKQN--ELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
+ P++ + Q+ L + ++++EC + R T I L Q+
Sbjct: 248 QKL-RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 4e-30
Identities = 49/265 (18%), Positives = 100/265 (37%), Gaps = 35/265 (13%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMA--YRKQVDTLSRINHKNFVNLIGYCED 455
+ G G ++AV +K+ A + + ++++ H N V L+G +
Sbjct: 22 DVMLGDYR-GNKVAVKC---------IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 71
Query: 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
++ +V EY G++ ++L + L + ++ + ++Y+ H
Sbjct: 72 EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHR 127
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA-----DPETNIYSFG 570
+L++ + +++D AKV++ T A P +++++SFG
Sbjct: 128 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 187
Query: 571 ILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
IL+ EI S G++PY + C A+ EV+K
Sbjct: 188 ILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP-------------PAVYEVMK 234
Query: 630 ECIKTDLRQRPTMNDIIVQLRQVIN 654
C D RP+ + QL +
Sbjct: 235 NCWHLDAAMRPSFLQLREQLEHIKT 259
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 4e-30
Identities = 43/282 (15%), Positives = 107/282 (37%), Gaps = 33/282 (11%)
Query: 387 FSNIIDTQSGCTIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHK 444
F+ +I +Y GTL + G +I A ++ D + + + + +H
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD--IGEVSQFLTEGIIMKDFSHP 88
Query: 445 NFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM 504
N ++L+G C E + ++V Y +G + + + + + + A ++++
Sbjct: 89 NVLSLLGICLRSE-GSPLVVLPYMKHGDLRNFIRNETHN-PTVKDLIGFGLQVAKGMKFL 146
Query: 505 HHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA---- 560
H +L++ L + + KVA+ K S + P+
Sbjct: 147 AS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 203
Query: 561 --------DPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612
+++++SFG+L+ E+++ P + + L R ++ P
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--NTFDITVYLLQGRR----LLQPE 257
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ + EV+ +C RP+ ++++ ++ + +
Sbjct: 258 YCP------DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 5e-30
Identities = 41/266 (15%), Positives = 102/266 (38%), Gaps = 35/266 (13%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
++ G + ++A+ T + + ++ ++ + + +++H V L G C +
Sbjct: 20 LVHLGYWLNKDKVAIK----TIREGAMSEEDF--IEEAEVMMKLSHPKLVQLYGVCLEQA 73
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
P +VFE+ +G + ++ + + + + + M + V H +L
Sbjct: 74 PI--CLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCL---DVCEGMAYLEEACVIHRDL 127
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPE----------TNIY 567
++ + ++ KV++ T + + + A PE ++++
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 568 SFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEV 627
SFG+LM E+ S E + S + + + + P L S + ++
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYKPRLAS------THVYQI 234
Query: 628 IKECIKTDLRQRPTMNDIIVQLRQVI 653
+ C K RP + ++ QL ++
Sbjct: 235 MNHCWKERPEDRPAFSRLLRQLAEIA 260
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (287), Expect = 5e-29
Identities = 37/269 (13%), Positives = 94/269 (34%), Gaps = 39/269 (14%)
Query: 398 TIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
++ +G +I VA + + K+ ++ + ++++ V LIG C+
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA- 80
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
M+V E A G + + L + + + + ++ + ++Y+ H +
Sbjct: 81 --EALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRD 134
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPL-----------ADPETN 565
L++ + L + + AK+++ + P ++
Sbjct: 135 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 194
Query: 566 IYSFGILMLEIIS-GKLPYCEEKELSIEKW--AADYLNEPRNFSCMIDPSLKSFKQNELE 622
++S+G+ M E +S G+ PY + K + + + P
Sbjct: 195 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP---------------P 239
Query: 623 AICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
+ ++ +C RP + ++R
Sbjct: 240 ELYALMSDCWIYKWEDRPDFLTVEQRMRA 268
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (285), Expect = 8e-29
Identities = 39/262 (14%), Positives = 83/262 (31%), Gaps = 29/262 (11%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
K S G + ++++ +V+ L + H N V D
Sbjct: 19 RCQKIRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR 75
Query: 457 EPFNRMMVFEYAPNGTVFEHLH--IKEMDHLDWNARMRIIMGTAYCLQYMH--HELNPPV 512
+V EY G + + KE +LD +R++ L+ H + V
Sbjct: 76 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTV 135
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV--LPPL------ADPET 564
H +L ++L K+ + I + + + + P + ++
Sbjct: 136 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKS 195
Query: 565 NIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAI 624
+I+S G L+ E+ + P+ + + + + R L
Sbjct: 196 DIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPYRYSDELNEI-------- 245
Query: 625 CEVIKECIKTDLRQRPTMNDII 646
I + RP++ +I+
Sbjct: 246 ---ITRMLNLKDYHRPSVEEIL 264
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (283), Expect = 1e-28
Identities = 50/287 (17%), Positives = 109/287 (37%), Gaps = 30/287 (10%)
Query: 379 ELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAI-TSSKDWLKSQEMAYRKQVDT 437
E+ +C +I +YKG L + AI T + + Q + + +
Sbjct: 3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62
Query: 438 LSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGT 497
+ + +H N + L G + M++ EY NG + ++ + ++ G
Sbjct: 63 MGQFSHHNIIRLEGVISKYK--PMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGI 119
Query: 498 AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP 557
A ++Y+ N H +L++ I + + KV++ + + + + +P
Sbjct: 120 AAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 176
Query: 558 PL-ADPE----------TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606
PE ++++SFGI+M E+++ E L+
Sbjct: 177 IRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE------------LSNHEVMK 224
Query: 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
+ D + AI +++ +C + + +RP DI+ L ++I
Sbjct: 225 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 271
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (282), Expect = 2e-28
Identities = 52/264 (19%), Positives = 104/264 (39%), Gaps = 38/264 (14%)
Query: 398 TIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T+YKG + VE+A + KS+ ++++ + L + H N V E
Sbjct: 24 TVYKGLDTETTVEVAWC---ELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST 80
Query: 457 EPFNR--MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
+ ++V E +GT+ +L + LQ++H PP+ H
Sbjct: 81 VKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIH 137
Query: 515 SNLSSHCIYLTD-DYAAKVAEICFTTIALPKSKVSDDIENSVL--PPLADPE-------- 563
+L I++T + K+ ++ T+ +V+ P PE
Sbjct: 138 RDLKCDNIFITGPTGSVKIGDLGLATL------KRASFAKAVIGTPEFMAPEMYEEKYDE 191
Query: 564 -TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622
++Y+FG+ MLE+ + + PY E + + +P +F + P +K
Sbjct: 192 SVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI------ 245
Query: 623 AICEVIKECIKTDLRQRPTMNDII 646
I+ CI+ + +R ++ D++
Sbjct: 246 -----IEGCIRQNKDERYSIKDLL 264
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (282), Expect = 2e-28
Identities = 44/268 (16%), Positives = 100/268 (37%), Gaps = 37/268 (13%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
T+ KG + A I ++ + + + + + ++++ V +IG CE +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE- 80
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
+ M+V E A G + ++L + H+ + ++ + ++Y+ H +L
Sbjct: 81 --SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDL 133
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPL-ADPE----------TNI 566
++ + L + AK+++ + + P PE +++
Sbjct: 134 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 193
Query: 567 YSFGILMLEIIS-GKLPYCEEKELSIEKW--AADYLNEPRNFSCMIDPSLKSFKQNELEA 623
+SFG+LM E S G+ PY K + + + P
Sbjct: 194 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCP---------------RE 238
Query: 624 ICEVIKECIKTDLRQRPTMNDIIVQLRQ 651
+ +++ C D+ RP + ++LR
Sbjct: 239 MYDLMNLCWTYDVENRPGFAAVELRLRN 266
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 3e-28
Identities = 41/275 (14%), Positives = 98/275 (35%), Gaps = 35/275 (12%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
++ GT + +A+ T + + ++ + ++ H+ V L ++
Sbjct: 32 EVWMGTWNGTTRVAIK----TLKPGTMSPEAF--LQEAQVMKKLRHEKLVQLYAVVSEEP 85
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
+ +V EY G++ + L + +L + + A + Y+ H +L
Sbjct: 86 IY---IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 139
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA---------DPETNIYS 568
+ I + ++ KVA+ + + + A +++++S
Sbjct: 140 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 199
Query: 569 FGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEV 627
FGIL+ E+ + G++PY + P C E++ ++
Sbjct: 200 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP-------------ESLHDL 246
Query: 628 IKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVP 662
+ +C + + +RPT + L + Q P
Sbjct: 247 MCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 281
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (277), Expect = 6e-28
Identities = 46/265 (17%), Positives = 90/265 (33%), Gaps = 35/265 (13%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+ G ++A+ + + E ++ + ++H+ V L G C
Sbjct: 19 VVKYGKWRGQYDVAIK----MIKEGSMSEDEF--IEEAKVMMNLSHEKLVQLYGVCTKQR 72
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
P ++ EY NG + +L + + ++Y+ H +L
Sbjct: 73 PI--FIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDL 126
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA---------DPETNIYS 568
++ + D KV++ + L S + +++I++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 569 FGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEV 627
FG+LM EI S GK+PY + A L R P L S E + +
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR-------PHLAS------EKVYTI 233
Query: 628 IKECIKTDLRQRPTMNDIIVQLRQV 652
+ C +RPT ++ + V
Sbjct: 234 MYSCWHEKADERPTFKILLSNILDV 258
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 110 bits (277), Expect = 1e-27
Identities = 46/294 (15%), Positives = 110/294 (37%), Gaps = 37/294 (12%)
Query: 373 PKLNRLELDTACEDFSNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAY 431
P ++ E++ + + +Y+G + +AV T +D ++ +E
Sbjct: 7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVK----TLKEDTMEVEEF-- 60
Query: 432 RKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARM 491
K+ + I H N V L+G C + PF + E+ G + ++L + +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--EFMTYGNLLDYLRECNRQEVSAVVLL 118
Query: 492 RIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI 551
+ + ++Y+ H +L++ + +++ KVA+ + + + +
Sbjct: 119 YMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175
Query: 552 ENSVLPPLA---------DPETNIYSFGILMLEIISGKLPYCEEKELS--IEKWAADYLN 600
+ A ++++++FG+L+ EI + + +LS E DY
Sbjct: 176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 235
Query: 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
E + E + E+++ C + + RP+ +I +
Sbjct: 236 E--------------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 109 bits (273), Expect = 5e-27
Identities = 45/289 (15%), Positives = 102/289 (35%), Gaps = 33/289 (11%)
Query: 379 ELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTL 438
E+D +C +I + G L + + T + + Q + + +
Sbjct: 22 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81
Query: 439 SRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTA 498
+ +H N ++L G P M++ E+ NG++ + + ++ G A
Sbjct: 82 GQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSLD-SFLRQNDGQFTVIQLVGMLRGIA 138
Query: 499 YCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS--KVSDDIENSVL 556
++Y+ H +L++ I + + KV++ + + +
Sbjct: 139 AGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 195
Query: 557 PPL-----------ADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRN 604
P ++++S+GI+M E++S G+ PY + + P
Sbjct: 196 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP 255
Query: 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
C A+ +++ +C + D RP I+ L ++I
Sbjct: 256 MDCP-------------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 291
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (264), Expect = 4e-26
Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 35/270 (12%)
Query: 398 TIYKGTL--SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455
+ +G SG ++VA + + ++V+ + ++H+N + L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
MV E AP G++ + K H R + A + Y+ H
Sbjct: 83 PPMK---MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHR 135
Query: 516 NLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA-----------DPET 564
+L++ + L K+ + E+ +P +
Sbjct: 136 DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS 195
Query: 565 NIYSFGILMLEIIS-GKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622
+ + FG+ + E+ + G+ P+ I K + PR C +
Sbjct: 196 DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP-------------Q 242
Query: 623 AICEVIKECIKTDLRQRPTMNDIIVQLRQV 652
I V+ +C RPT + L +
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 103 bits (259), Expect = 4e-25
Identities = 38/257 (14%), Positives = 87/257 (33%), Gaps = 29/257 (11%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+Y + + +A+ + + + + K+V L ++ H N + G +
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 87
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+V EY K+ L + G L Y+H + H +
Sbjct: 88 H--TAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRD 140
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKV-------SDDIENSVLPPLADPETNIYSF 569
+ + I L++ K+ + +I P + + ++ ++ D + +++S
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200
Query: 570 GILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIK 629
GI +E+ K P +S + P S ++F +
Sbjct: 201 GITCIELAERKPPLFNMNAMSA-LYHIAQNESPALQSGHWSEYFRNF-----------VD 248
Query: 630 ECIKTDLRQRPTMNDII 646
C++ + RPT ++
Sbjct: 249 SCLQKIPQDRPTSEVLL 265
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 6e-25
Identities = 54/294 (18%), Positives = 116/294 (39%), Gaps = 48/294 (16%)
Query: 386 DFSNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NH 443
F ++I + + K + G+ + A + + K + +++ L ++ +H
Sbjct: 13 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKLGHH 70
Query: 444 KNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH--------------LDWNA 489
N +NL+G CE + EYAP+G + + L + L
Sbjct: 71 PNIINLLGACEHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128
Query: 490 RMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSD 549
+ A + Y+ H +L++ I + ++Y AK+A+ + K +
Sbjct: 129 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 185
Query: 550 DI-------ENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSI-EKWAADY-L 599
S+ + ++++S+G+L+ EI+S G PYC + EK Y L
Sbjct: 186 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL 245
Query: 600 NEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
+P N + + +++++C + +RP+ I+V L +++
Sbjct: 246 EKPLNCD---------------DEVYDLMRQCWREKPYERPSFAQILVSLNRML 284
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 2e-24
Identities = 54/285 (18%), Positives = 103/285 (36%), Gaps = 54/285 (18%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE 457
G +GV I VA + D S+ A ++ ++++ +H+N VNL+G C
Sbjct: 57 TAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114
Query: 458 PFNRMMVFEYAPNGTVFEHLHIK---------------------EMDHLDWNARMRIIMG 496
P ++FEY G + +L K +++ L + +
Sbjct: 115 PI--YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 172
Query: 497 TAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVL 556
A ++++ H +L++ + +T K+ + + S +
Sbjct: 173 VAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 229
Query: 557 PPLADPE----------TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNF 605
PE ++++S+GIL+ EI S G PY + NF
Sbjct: 230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG-------------IPVDANF 276
Query: 606 SCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQL 649
+I K E I +++ C D R+RP+ ++ L
Sbjct: 277 YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 2e-24
Identities = 50/294 (17%), Positives = 98/294 (33%), Gaps = 55/294 (18%)
Query: 398 TIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLI 450
+ + T + + +AV ++ A ++ LS + NH N VNL+
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVK----MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 93
Query: 451 GYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH----------------LDWNARMRII 494
G C P +++ EY G + L K LD +
Sbjct: 94 GACTIGGP--TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 151
Query: 495 MGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFT-TIALPKSKVSDDIEN 553
A + ++ + H +L++ I LT K+ + I + V
Sbjct: 152 YQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 554 SVLPPLA---------DPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN 604
+ +A E++++S+GI + E+ S +
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------------PGMPVDSK 256
Query: 605 FSCMIDPSLK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657
F MI + ++ + +++K C D +RPT I+ + + I+ S
Sbjct: 257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 3e-24
Identities = 51/255 (20%), Positives = 92/255 (36%), Gaps = 28/255 (10%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+Y I +A + ++ E R++V+ S + H N + L GY D
Sbjct: 21 NVYLAREKQSKFI-LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT 79
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
++ EYAP GTV+ L ++ D I A L Y H + V H ++
Sbjct: 80 RV--YLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH---SKRVIHRDI 132
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPP------LADPETNIYSFGI 571
+ L K+A+ ++ A + + LPP + D + +++S G+
Sbjct: 133 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 192
Query: 572 LMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKEC 631
L E + GK P+ K F + + I
Sbjct: 193 LCYEFLVGKPPFEANTYQETYKRI---SRVEFTFPDFVTEGARDL-----------ISRL 238
Query: 632 IKTDLRQRPTMNDII 646
+K + QRP + +++
Sbjct: 239 LKHNPSQRPMLREVL 253
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 3e-24
Identities = 38/268 (14%), Positives = 91/268 (33%), Gaps = 34/268 (12%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+++G S A+A T S + ++ T+ + +H + V LIG ++
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP 81
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
+ ++ E G + LD + + + L Y+ H ++
Sbjct: 82 VW---IIMELCTLGELRSF-LQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDI 134
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA---------DPETNIYS 568
++ + ++ + K+ + + + + +A ++++
Sbjct: 135 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 194
Query: 569 FGILMLEII-SGKLPYCEEKELSIEKW--AADYLNEPRNFSCMIDPSLKSFKQNELEAIC 625
FG+ M EI+ G P+ K + + L P N +
Sbjct: 195 FGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP---------------PTLY 239
Query: 626 EVIKECIKTDLRQRPTMNDIIVQLRQVI 653
++ +C D +RP ++ QL ++
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQLSTIL 267
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 101 bits (251), Expect = 4e-24
Identities = 42/313 (13%), Positives = 102/313 (32%), Gaps = 51/313 (16%)
Query: 373 PKLNRLELDTACEDFSNIIDTQSGCTIYKGTLSSGVEIAVAAT-AI-TSSKDWLKSQEMA 430
PKL LE ++ I + +++ + A+ ++ +
Sbjct: 3 PKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD 62
Query: 431 YRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLH------------ 478
++++ ++ ++ N V L+G C +P ++FEY G + E L
Sbjct: 63 FQREAALMAEFDNPNIVKLLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120
Query: 479 ----------IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528
L ++ I A + Y+ H +L++ + ++
Sbjct: 121 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENM 177
Query: 529 AAKVAEICFTTIALPKSKVSDD----------IENSVLPPLADPETNIYSFGILMLEIIS 578
K+A+ + D S+ E++++++G+++ EI S
Sbjct: 178 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 237
Query: 579 GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQ 638
L + + D ++ + +N + +++ C
Sbjct: 238 YGLQPYYG------------MAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPAD 285
Query: 639 RPTMNDIIVQLRQ 651
RP+ I L++
Sbjct: 286 RPSFCSIHRILQR 298
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 99 bits (248), Expect = 1e-23
Identities = 36/279 (12%), Positives = 101/279 (36%), Gaps = 37/279 (13%)
Query: 399 IYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP 458
+ KG + E VA + ++ + + + + + N + V L+G +P
Sbjct: 40 VAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 97
Query: 459 FNRMMVFEYAPNGTVFEHLH--------IKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
+++ E G + +L + + +++ A + Y++
Sbjct: 98 --TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN--- 152
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPE------- 563
H +L++ + +D+ K+ + T + + PE
Sbjct: 153 KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF 212
Query: 564 ---TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620
++++SFG+++ EI + + L+ + +++ L N
Sbjct: 213 TTYSDVWSFGVVLWEIATLAEQPYQG------------LSNEQVLRFVMEGGLLDKPDNC 260
Query: 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQ 659
+ + E+++ C + + + RP+ +II +++ + +
Sbjct: 261 PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.5 bits (245), Expect = 1e-23
Identities = 37/260 (14%), Positives = 90/260 (34%), Gaps = 34/260 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+ + +AV + + D ++ +K++ +NH+N V G+ +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKMLNHENVVKFYGHRREG 75
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+ + EY G +F+ + + R + Y+H + H +
Sbjct: 76 N--IQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRD 128
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPE-----------TN 565
+ + L + K+++ T+ ++ + P PE +
Sbjct: 129 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 188
Query: 566 IYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAIC 625
++S GI++ +++G+LP+ + + E N ID + +
Sbjct: 189 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL--------- 239
Query: 626 EVIKECIKTDLRQRPTMNDI 645
+ + + + R T+ DI
Sbjct: 240 --LHKILVENPSARITIPDI 257
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 98.6 bits (245), Expect = 2e-23
Identities = 42/269 (15%), Positives = 94/269 (34%), Gaps = 38/269 (14%)
Query: 398 TIYKGT-LSSGVEIAV----AATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIG 451
+ + + E AV + S + ++ A K+VD L +++ H N + L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP 511
E + +VF+ G +F++ + E L +I+ + +H
Sbjct: 78 TYETN--TFFFLVFDLMKKGELFDY--LTEKVTLSEKETRKIMRALLEVICALHKL---N 130
Query: 512 VAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-------------ENSVLPP 558
+ H +L I L DD K+ + F+ P K+ + + P
Sbjct: 131 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP 190
Query: 559 LADPETNIYSFGILMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFK 617
E +++S G++M +++G P+ K++ + + ++K
Sbjct: 191 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL- 249
Query: 618 QNELEAICEVIKECIKTDLRQRPTMNDII 646
+ + ++R T + +
Sbjct: 250 ----------VSRFLVVQPQKRYTAEEAL 268
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.4 bits (247), Expect = 2e-23
Identities = 39/307 (12%), Positives = 95/307 (30%), Gaps = 51/307 (16%)
Query: 378 LELDTACEDFS--NIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQ 434
+EL +DF + + +G ++K + SG+ +A + + ++
Sbjct: 1 MELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARK----LIHLEIKPAIRNQIIRE 54
Query: 435 VDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRII 494
+ L N V G D + E+ G++ + L + + ++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDG--EISICMEHMDGGSLDQVLK--KAGRIPEQILGKVS 110
Query: 495 MGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENS 554
+ L Y+ + + H ++ I + K+ + + + S S
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 555 VLPP------LADPETNIYSFGILMLEIISGKLPYC----EEKELSIEKWAADYLNEPRN 604
+ P +++I+S G+ ++E+ G+ P +E EL E
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 605 FSCMIDPSLKSFKQNEL--------------------------EAICEVIKECIKTDLRQ 638
L S+ + + + +C+ + +
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 288
Query: 639 RPTMNDI 645
R + +
Sbjct: 289 RADLKQL 295
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.1 bits (244), Expect = 3e-23
Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 33/258 (12%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T+Y +++G E+A+ + +E+ ++ + + N VN +
Sbjct: 35 TVYTAMDVATGQEVAIR----QMNLQQQPKKELIIN-EILVMRENKNPNIVNYLDSYLVG 89
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+ +V EY G++ + + MD + L+++H V H +
Sbjct: 90 D--ELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSV--LPP------LADPETNIYS 568
+ S I L D + K+ + F P+ + + + P P+ +I+S
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 569 FGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVI 628
GI+ +E+I G+ PY E L A + + F +
Sbjct: 202 LGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF-----------L 250
Query: 629 KECIKTDLRQRPTMNDII 646
C+ D+ +R + +++
Sbjct: 251 NRCLDMDVEKRGSAKELL 268
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 99.4 bits (247), Expect = 3e-23
Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 33/260 (12%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+++ T ++G A D + RK++ T+S + H VNL EDD
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESD-----KETVRKEIQTMSVLRHPTLVNLHDAFEDD 95
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+M++E+ G +FE + E + + + + + L +MH H +
Sbjct: 96 NEM--VMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLD 149
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA---------DPETNIY 567
L I T + ++ I F A K S + A T+++
Sbjct: 150 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMW 209
Query: 568 SFGILMLEIISGKLPYCEEKELS-IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICE 626
S G+L ++SG P+ E + + + N + I K F
Sbjct: 210 SVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF---------- 259
Query: 627 VIKECIKTDLRQRPTMNDII 646
I++ + D R T++ +
Sbjct: 260 -IRKLLLADPNTRMTIHQAL 278
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.7 bits (243), Expect = 5e-23
Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 42/266 (15%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+YK +A A T S++ L+ Y ++D L+ +H N V L+ +
Sbjct: 27 KVYKAQNKETSVLAAAKVIDTKSEEELED----YMVEIDILASCDHPNIVKLLDAFYYEN 82
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
N ++ E+ G V + E L + + T L Y+H + + H +L
Sbjct: 83 --NLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 136
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-------------ENSVLPPLADPET 564
+ I T D K+A+ + + D + D +
Sbjct: 137 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 196
Query: 565 NIYSFGILMLEIISGKLPYCEEKELS----IEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620
+++S GI ++E+ + P+ E + I K L +P +S + K F
Sbjct: 197 DVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS----SNFKDF---- 248
Query: 621 LEAICEVIKECIKTDLRQRPTMNDII 646
+K+C++ ++ R T + ++
Sbjct: 249 -------LKKCLEKNVDARWTTSQLL 267
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.4 bits (242), Expect = 6e-23
Identities = 46/287 (16%), Positives = 102/287 (35%), Gaps = 41/287 (14%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T+ L++ E A+ + +++ ++ D +SR++H FV L +DD
Sbjct: 23 TVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 80
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
E YA NG + +++ ++ D L+Y+H + H +
Sbjct: 81 E--KLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHG---KGIIHRD 133
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPE----------TNI 566
L I L +D ++ + + P+SK + PE +++
Sbjct: 134 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDL 193
Query: 567 YSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICE 626
++ G ++ ++++G P+ E I + + +F P +
Sbjct: 194 WALGCIIYQLVAGLPPFRAGNEYLIFQ---KIIKLEYDFPEKFFPKARDL---------- 240
Query: 627 VIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVPRLSPLWWAELE 673
+++ + D +R ++ P +A P + W L
Sbjct: 241 -VEKLLVLDATKRLGC-------EEMEGYGPLKAHPFFESVTWENLH 279
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.0 bits (241), Expect = 1e-22
Identities = 36/235 (15%), Positives = 81/235 (34%), Gaps = 35/235 (14%)
Query: 425 KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDH 484
+ ++ +K++ L+ H+N ++L E E +M+FE+ +FE ++
Sbjct: 42 GTDQVLVKKEISILNIARHRNILHLHESFESMEEL--VMIFEFISGLDIFERIN-TSAFE 98
Query: 485 LDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICF------- 537
L+ + + LQ++H + + H ++ I ++ + I F
Sbjct: 99 LNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155
Query: 538 ------TTIALPKSKVSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSI 591
P+ + ++ V+ D ++S G L+ ++SG P+ E I
Sbjct: 156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATD----MWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 592 -EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645
E I F + + + + R T ++
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMDF-----------VDRLLVKERKSRMTASEA 255
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 95.9 bits (238), Expect = 2e-22
Identities = 38/258 (14%), Positives = 84/258 (32%), Gaps = 28/258 (10%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+ + +A+ +K L+ +E + ++ L +I H N V L E
Sbjct: 24 EVILAEDKRTQKLVAIK----CIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 79
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
++ + G +F+ I E R+I ++Y+H
Sbjct: 80 GHL--YLIMQLVSGGELFD--RIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKP 135
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-------ENSVLPPLADPETNIYSF 569
+ L +D +++ + + P S +S + + +S
Sbjct: 136 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 195
Query: 570 GILMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVI 628
G++ ++ G P+ +E + + E+ + I S K F I
Sbjct: 196 GVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF-----------I 244
Query: 629 KECIKTDLRQRPTMNDII 646
+ ++ D +R T +
Sbjct: 245 RHLMEKDPEKRFTCEQAL 262
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.0 bits (238), Expect = 3e-22
Identities = 36/284 (12%), Positives = 99/284 (34%), Gaps = 34/284 (11%)
Query: 385 EDFS--NIIDTQSGCTIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI 441
+F ++ + + T+YKG + G ++ + + + ++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 442 NHKNFVNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCL 501
++ + L+G C ++ + P G + ++ + D++ + + A +
Sbjct: 69 DNPHVCRLLGICLTS---TVQLITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGM 124
Query: 502 QYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLAD 561
Y+ + H +L++ + + K+ + + + K V
Sbjct: 125 NYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 562 PE----------TNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610
E ++++S+G+ + E+++ G PY I P+ C ID
Sbjct: 182 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID 241
Query: 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
+ ++ +C D RP ++I++ ++
Sbjct: 242 -------------VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 96.3 bits (239), Expect = 4e-22
Identities = 40/261 (15%), Positives = 94/261 (36%), Gaps = 35/261 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+++ ++G + + + ++ +++++H +NL ED
Sbjct: 44 VVHRCVEKATGRVFVAK----FINTPYPLDKYTVKN-EISIMNQLHHPKLINLHDAFEDK 98
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+++ E+ G +F+ + E + + + L++MH + H +
Sbjct: 99 YEM--VLILEFLSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLD 152
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPE----------TNI 566
+ I A+ V I F +A + + A PE T++
Sbjct: 153 IKPENIMCETKKASSVKIIDF-GLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDM 211
Query: 567 YSFGILMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAIC 625
++ G+L ++SG P+ E +L + + + P K F
Sbjct: 212 WAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF--------- 262
Query: 626 EVIKECIKTDLRQRPTMNDII 646
IK ++ + R+R T++D +
Sbjct: 263 --IKNLLQKEPRKRLTVHDAL 281
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.8 bits (232), Expect = 1e-21
Identities = 47/284 (16%), Positives = 102/284 (35%), Gaps = 52/284 (18%)
Query: 401 KGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPF 459
K + ++AV D + +++ + I HKN +NL+G C D P
Sbjct: 39 KDKPNRVTKVAVK----MLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 94
Query: 460 NRMMVFEYAPNGTVFEHLHIKEM--------------DHLDWNARMRIIMGTAYCLQYMH 505
++ EYA G + E+L + + L + A ++Y+
Sbjct: 95 --YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA 152
Query: 506 HELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPP------- 558
H +L++ + +T+D K+A+ +
Sbjct: 153 S---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 209
Query: 559 ---LADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKW--AADYLNEPRNFSCMIDPS 612
+ +++++SFG+L+ EI + G PY + K +++P N +
Sbjct: 210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT------ 263
Query: 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656
+ ++++C QRPT ++ L +++ ++
Sbjct: 264 ---------NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 298
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 92.5 bits (229), Expect = 2e-21
Identities = 43/274 (15%), Positives = 98/274 (35%), Gaps = 36/274 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
++ L ++AV ++D S + +R++ + +NH V + E +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALNHPAIVAVYDTGEAE 79
Query: 457 EPFNR--MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
P +V EY T+ + +H + + +I L + H + H
Sbjct: 80 TPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQ---NGIIH 134
Query: 515 SNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVL--PPLADPE--------- 563
++ I ++ A KV + + S S +V+ PE
Sbjct: 135 RDVKPANIMISATNAVKVMDFGIARA-IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA 193
Query: 564 -TNIYSFGILMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+++YS G ++ E+++G+ P+ + +S+ + + P + L +
Sbjct: 194 RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAV----- 248
Query: 622 EAICEVIKECIKTDLRQRP-TMNDIIVQLRQVIN 654
+ + + + R T ++ L +V N
Sbjct: 249 ------VLKALAKNPENRYQTAAEMRADLVRVHN 276
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.2 bits (220), Expect = 4e-20
Identities = 33/273 (12%), Positives = 86/273 (31%), Gaps = 27/273 (9%)
Query: 398 TIYKGT--LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCED 455
++K + G +A+ + + ++ + + + L H N V L C
Sbjct: 22 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 81
Query: 456 DEP--FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513
++ + + + +L + ++ L ++H V
Sbjct: 82 SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVV 138
Query: 514 HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-------ENSVLPPLADPETNI 566
H +L I +T K+A+ I + ++ + +L ++
Sbjct: 139 HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDL 198
Query: 567 YSFGILMLEIISGKLPYCEEKELSI-------------EKWAADYLNEPRNFSCMIDPSL 613
+S G + E+ K + ++ E W D + F +
Sbjct: 199 WSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI 258
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
+ F + E +++ +C+ + +R + +
Sbjct: 259 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 291
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.6 bits (219), Expect = 1e-19
Identities = 36/235 (15%), Positives = 81/235 (34%), Gaps = 21/235 (8%)
Query: 424 LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR--MMVFEYAPNGTVFEHLHIKE 481
L+ A R+ + V ++ E+ + ++V E G +F + +
Sbjct: 45 LQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG 104
Query: 482 MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541
I+ +QY+H + +AH ++ + T + ++ A
Sbjct: 105 DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161
Query: 542 LPKSKVSDDIENSVLPPLADPE----------TNIYSFGILMLEIISGKLPYCEEKELSI 591
+ + P PE +++S G++M ++ G P+ L+I
Sbjct: 162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 221
Query: 592 EKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
+ + + S S E + +I+ +KT+ QR T+ + +
Sbjct: 222 SPGMKTRIRMGQYEFPNPEWSEVS------EEVKMLIRNLLKTEPTQRMTITEFM 270
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.7 bits (211), Expect = 6e-19
Identities = 40/287 (13%), Positives = 91/287 (31%), Gaps = 50/287 (17%)
Query: 398 TIYKGT------LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIG 451
+ + ++ +AV + S+ A ++ L I H V +
Sbjct: 28 QVIEADAFGIDKTATCRTVAVK----MLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 83
Query: 452 YCEDDEPFNRMMVFEYAPNGTVFEHLHIKEM--------------DHLDWNARMRIIMGT 497
M++ E+ G + +L K D L +
Sbjct: 84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQV 143
Query: 498 AYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLP 557
A ++++ H +L++ I L++ K+ + + K ++ LP
Sbjct: 144 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARD-IYKDPDYVRKGDARLP 199
Query: 558 PL-----------ADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFS 606
+++++SFG+L+ EI S + I++ L E
Sbjct: 200 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP--GVKIDEEFCRRLKEGTRM- 256
Query: 607 CMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
+ + + +C + QRPT ++++ L ++
Sbjct: 257 --------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 84.4 bits (208), Expect = 3e-18
Identities = 31/255 (12%), Positives = 77/255 (30%), Gaps = 29/255 (11%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQE---MAYRKQVDTLSRINHKNFVNLIGYCE 454
+Y + ++ A + + +K E + R + +S + V +
Sbjct: 19 EVYGCRKADTGKM-YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH 77
Query: 455 DDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
+ + + G + HL + L++MH+ V +
Sbjct: 78 TPD--KLSFILDLMNGGDLHYHLSQHGVFS--EADMRFYAAEIILGLEHMHN---RFVVY 130
Query: 515 SNLSSHCIYLTDDYAAKVAEICF-------TTIALPKSKVSDDIENSVLPPLADPETNIY 567
+L I L + +++++ A + E D + +
Sbjct: 131 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWF 190
Query: 568 SFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEV 627
S G ++ +++ G P+ + K + L P L+S
Sbjct: 191 SLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL----------- 239
Query: 628 IKECIKTDLRQRPTM 642
++ ++ D+ +R
Sbjct: 240 LEGLLQRDVNRRLGC 254
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.7 bits (206), Expect = 4e-18
Identities = 33/281 (11%), Positives = 85/281 (30%), Gaps = 42/281 (14%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+ + V +A+ + + + + +++ L R H+N + +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQR----TLREIKILLRFRHENIIGINDIIRAP 78
Query: 457 --EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAH 514
E + + + +++ L + HL + + L+Y+H V H
Sbjct: 79 TIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLH 132
Query: 515 SNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPP------------LADP 562
+L + L K+ + +A P + + V
Sbjct: 133 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 192
Query: 563 ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ---- 618
+I+S G ++ E++S + + + L L P +LK+
Sbjct: 193 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL 252
Query: 619 -------------NELEAICEVIKECIKTDLRQRPTMNDII 646
N +++ + + + +R + +
Sbjct: 253 PHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.6 bits (203), Expect = 6e-18
Identities = 34/273 (12%), Positives = 87/273 (31%), Gaps = 31/273 (11%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T+YK ++ +A+ + + +++ L ++H N + L+
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
N +VF++ E + L + ++ T L+Y+H + H +
Sbjct: 73 S--NISLVFDFMET--DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRD 125
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI---------ENSVLPPLADPETNIY 567
L + + L ++ K+A+ ++ E + +++
Sbjct: 126 LKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMW 185
Query: 568 SFGILMLEIISGKLPYCEEKELSI-------------EKWAADY-LNEPRNFSCMIDPSL 613
+ G ++ E++ + +L E+W L + F L
Sbjct: 186 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL 245
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
+ + ++I+ + R T +
Sbjct: 246 HHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 278
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.8 bits (201), Expect = 2e-17
Identities = 37/279 (13%), Positives = 80/279 (28%), Gaps = 42/279 (15%)
Query: 398 TIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC--- 453
+Y+ L SG +A+ K L+ + R ++ + +++H N V L +
Sbjct: 35 VVYQAKLCDSGELVAI--------KKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFYSS 85
Query: 454 -EDDEPFNRMMVFEYAPNGTVFEHLH-IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPP 511
E + +V +Y P H + L + L Y+H
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FG 142
Query: 512 VAHSNLSSHCIYLTDD-YAAKVAEICFTTIALPKSKVSDDIENSVLPPLA--------DP 562
+ H ++ + L D K+ + + I +
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 202
Query: 563 ETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI------------- 609
+++S G ++ E++ G+ + + + L P
Sbjct: 203 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 262
Query: 610 --DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
P K F+ + ++ R T +
Sbjct: 263 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 80.3 bits (197), Expect = 3e-17
Identities = 40/273 (14%), Positives = 86/273 (31%), Gaps = 34/273 (12%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
+YK + G A+ + + + S + +++ L + H N V L
Sbjct: 17 VVYKAQNNYGETFALKKIRLEKEDEGIPSTTI---REISILKELKHSNIVKLYDVIHTK- 72
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
++VFE+ + L L+ ++ + Y H + V H +L
Sbjct: 73 -KRLVLVFEHLDQ--DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDL 126
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI---------ENSVLPPLADPETNIYS 568
+ + + K+A+ + + + +I+S
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWS 186
Query: 569 FGILMLEIISGKLPYCEEKELSIEKWAADYLNEP---------------RNFSCMIDPSL 613
G + E+++G + E L P NF+
Sbjct: 187 VGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPW 246
Query: 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
+SF + E+ +++ + +K D QR T +
Sbjct: 247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.2 bits (197), Expect = 6e-17
Identities = 35/260 (13%), Positives = 79/260 (30%), Gaps = 31/260 (11%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSR-INHKNFVNLIGYCEDD 456
++ + A A+ + + LS H ++ +
Sbjct: 17 KVFLAEFKKTNQF-FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK 75
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
E +M EY G + H I+ D + LQ++H + + +
Sbjct: 76 ENLFFVM--EYLNGGDLMYH--IQSCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRD 128
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI--------ENSVLPPLADPETNIYS 568
L I L D K+A+ + ++ +L + + +S
Sbjct: 129 LKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWS 188
Query: 569 FGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVI 628
FG+L+ E++ G+ P+ + E + + + ++ K +
Sbjct: 189 FGVLLYEMLIGQSPFHGQDEEELFHS---IRMDNPFYPRWLEKEAKDL-----------L 234
Query: 629 KECIKTDLRQRPTMNDIIVQ 648
+ + +R + I Q
Sbjct: 235 VKLFVREPEKRLGVRGDIRQ 254
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.5 bits (195), Expect = 6e-17
Identities = 35/274 (12%), Positives = 90/274 (32%), Gaps = 34/274 (12%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+YK +G +A+ + + + + S + +++ L +NH N V L+ +
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAI---REISLLKELNHPNIVKLLDVIHTE 73
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+VFE+ + + + + + + + LQ + + V H +
Sbjct: 74 N--KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQ---LLQGLAFCHSHRVLHRD 127
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVL---PPLA------DPETNIY 567
L + + + A K+A+ + ++ P + +I+
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 568 SFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK---------- 617
S G + E+++ + + + E+ L P S+ +K
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 618 -----QNELEAICEVIKECIKTDLRQRPTMNDII 646
E ++ + + D +R + +
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.0 bits (194), Expect = 9e-17
Identities = 46/265 (17%), Positives = 93/265 (35%), Gaps = 36/265 (13%)
Query: 398 TIYKGT-LSSGVEIAV---AATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC 453
+ K S+G++ A SS+ + +++ ++V L I H N + L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI--EREVSILKEIQHPNVITLHEVY 82
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513
E+ +++ E G +F+ L E + L + + Y+H + +A
Sbjct: 83 ENKTDV--ILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLH---SLQIA 135
Query: 514 HSNLSSHCIYLTDDYAAK-VAEICFTTIALPKSKVSDDIENSVLPPLADPE--------- 563
H +L I L D K +I +A ++ P PE
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGL 195
Query: 564 -TNIYSFGILMLEIISGKLPYCEEKELSI-EKWAADYLNEPRNFSCMIDPSLKSFKQNEL 621
+++S G++ ++SG P+ + + +A + K F
Sbjct: 196 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF----- 250
Query: 622 EAICEVIKECIKTDLRQRPTMNDII 646
I+ + D ++R T+ D +
Sbjct: 251 ------IRRLLVKDPKKRMTIQDSL 269
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.9 bits (196), Expect = 9e-17
Identities = 36/276 (13%), Positives = 85/276 (30%), Gaps = 38/276 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+ +G ++A+ + + +++ L + H+N + L+ D
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY---RELRLLKHMRHENVIGLLDVFTPD 89
Query: 457 EPF----NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
E + +V + + + + + L + ++ L+Y+H +
Sbjct: 90 ETLDDFTDFYLVMPFMGT----DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA---AGI 142
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA------DPETNI 566
H +L + + +D K+ + A + P + +I
Sbjct: 143 IHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDI 202
Query: 567 YSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP-----------------RNFSCMI 609
+S G +M E+I+GK + L K P + +
Sbjct: 203 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE 262
Query: 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645
S N ++++ + D QR T +
Sbjct: 263 KKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 77.4 bits (190), Expect = 4e-16
Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 27/249 (10%)
Query: 398 TIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE 457
++ A + Q + LS + H + + G +D +
Sbjct: 19 RVHLIRSRHNGRY-YAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ 77
Query: 458 PFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517
M+ +Y G +F L + L+Y+H + + +L
Sbjct: 78 --QIFMIMDYIEGGELFSLLRKSQRF--PNPVAKFYAAEVCLALEYLHS---KDIIYRDL 130
Query: 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA-----DPETNIYSFGIL 572
I L + K+ + F + + + P + + + +SFGIL
Sbjct: 131 KPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 190
Query: 573 MLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECI 632
+ E+++G P+ + + K LN F + +K + I
Sbjct: 191 IYEMLAGYTPFYDS---NTMKTYEKILNAELRFPPFFNEDVKDL-----------LSRLI 236
Query: 633 KTDLRQRPT 641
DL QR
Sbjct: 237 TRDLSQRLG 245
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.6 bits (190), Expect = 4e-16
Identities = 35/286 (12%), Positives = 90/286 (31%), Gaps = 46/286 (16%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
++K +G ++A+ + + K+ + +++ L + H+N VNLI C
Sbjct: 25 EVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTK 81
Query: 457 EPFNRM------MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNP 510
+VF++ + ++ L R+ ++ L +++
Sbjct: 82 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML-----LNGLYYIHRN 136
Query: 511 PVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA---------- 560
+ H ++ + + +T D K+A+ + + + L
Sbjct: 137 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE 196
Query: 561 ---DPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617
P +++ G +M E+ + E + + + ++
Sbjct: 197 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE 256
Query: 618 QNEL------------------EAICEVIKECIKTDLRQRPTMNDI 645
+ EL ++I + + D QR +D
Sbjct: 257 KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 76.8 bits (188), Expect = 5e-16
Identities = 34/275 (12%), Positives = 75/275 (27%), Gaps = 38/275 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
IY GT +++G E+A+ + +K++ + + + I +C +
Sbjct: 22 DIYLGTDIAAGEEVAI-------KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAE 74
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+N +MV E E L + + ++Y+H + H +
Sbjct: 75 GDYN-VMVMELLGPSL--EDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRD 128
Query: 517 LSSHCI-YLTDDYAAKVAEICFTTIALPKSKVSDDIENSVL-------PPLADPE----- 563
+ V I F + + A
Sbjct: 129 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI 188
Query: 564 -----TNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618
++ S G +++ G LP+ K A R + ++ +
Sbjct: 189 EQSRRDDLESLGYVLMYFNLGSLPWQ------GLKAATKRQKYERISEKKMSTPIEVLCK 242
Query: 619 NELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653
+ C +P + + R +
Sbjct: 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.3 bits (187), Expect = 7e-16
Identities = 36/259 (13%), Positives = 84/259 (32%), Gaps = 34/259 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMA-YRKQVDTLSRIN--HKNFVNLIGYC 453
++Y G +S + +A+ DW + +V L +++ + L+ +
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYM------HHE 507
E + F +++ E I E L +++ H +
Sbjct: 79 ERPDSF--VLILERPEPVQDLFDF-ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRD 135
Query: 508 LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLADPETNIY 567
+ +L+ + L D + + + T ++V E ++
Sbjct: 136 IKDENILIDLNRGELKLIDFGSGALLKDTVYT-DFDGTRVYSPPEWIRYHRYHGRSAAVW 194
Query: 568 SFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEV 627
S GIL+ +++ G +P+ ++E+ + F + +
Sbjct: 195 SLGILLYDMVCGDIPFEHDEEI---------IRGQVFFRQRVSSECQHL----------- 234
Query: 628 IKECIKTDLRQRPTMNDII 646
I+ C+ RPT +I
Sbjct: 235 IRWCLALRPSDRPTFEEIQ 253
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 71.8 bits (175), Expect = 3e-14
Identities = 27/278 (9%), Positives = 74/278 (26%), Gaps = 40/278 (14%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
I++GT L + ++A+ + +S R + T + + + Y +
Sbjct: 20 VIFEGTNLLNNQQVAI-------KFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQE 72
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
N ++V + G E L +Q +H + + +
Sbjct: 73 GLHN-VLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRD 126
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA---------------- 560
+ + + I + K + +
Sbjct: 127 IKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL 186
Query: 561 ----DPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616
++ + G + + + G LP+ K + ++ + ++ L+
Sbjct: 187 GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS------TPLREL 240
Query: 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654
E + + P + + +V+
Sbjct: 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 278
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.9 bits (170), Expect = 1e-13
Identities = 31/225 (13%), Positives = 69/225 (30%), Gaps = 31/225 (13%)
Query: 432 RKQVDTLSRINHKNF-VNLIGYCEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNAR 490
R + L I F V L + + + ++ +Y G +F HL +E
Sbjct: 76 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL--DYINGGELFTHLSQRERFTEHEVQI 133
Query: 491 MRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDD 550
+ + H + + ++ I L + + + + +
Sbjct: 134 Y-----VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY 188
Query: 551 IENSVLPPLA-----------DPETNIYSFGILMLEIISGKLPYCEEKEL-SIEKWAADY 598
+ +A D + +S G+LM E+++G P+ + E S + +
Sbjct: 189 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 248
Query: 599 LNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMN 643
L + + K I+ + D ++R
Sbjct: 249 LKSEPPYPQEMSALAKDL-----------IQRLLMKDPKKRLGCG 282
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 68.5 bits (166), Expect = 6e-13
Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 12/158 (7%)
Query: 19 INNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDM 78
+ +L L+L + P + + S + L G + ++
Sbjct: 237 LASLTNLTDLDLANNQISNL------APLSGLTKLTELKLGANQISNISPLAGLTALTNL 290
Query: 79 KERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE 138
+ + + L +L +L L N+ S + P + LTKL+ L +NNK+S
Sbjct: 291 ELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSS 346
Query: 139 ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
++ L ++ L G+N+ P L+ T +++L +D
Sbjct: 347 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLND 382
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 66.2 bits (160), Expect = 3e-12
Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 10/135 (7%)
Query: 19 INNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDM 78
++ L L L + S ++ L L +
Sbjct: 259 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNL----TYLTL 314
Query: 79 KERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE 138
++ + L+ L+ L N S L LT + L +N++S + P
Sbjct: 315 YFNNISDI--SPVSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP-- 368
Query: 139 ISRLPSLKRLLLGNN 153
++ L + +L L +
Sbjct: 369 LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 47.3 bits (111), Expect = 4e-06
Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L++ VL K + + + + +L ++ L + I + L +L ++ NN
Sbjct: 21 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNN 76
Query: 154 KFEGSIPLELSRFTLLSELQFDDY 177
+ P L T L ++ ++
Sbjct: 77 QLTDITP--LKNLTKLVDILMNNN 98
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Query: 52 NWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI 111
+ S + ++ L + + S + + L KL++L L+ N S +
Sbjct: 154 TSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDIT 213
Query: 112 PKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSE 171
P + T L+ L L+ N+L I ++ L +L L L NN+ P LS T L+E
Sbjct: 214 PLGIL--TNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTE 267
Query: 172 LQFDDY 177
L+
Sbjct: 268 LKLGAN 273
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKL 131
+ + + ++ T+ L + L + + + L L ++ SNN+L
Sbjct: 23 EKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQL 78
Query: 132 SGIIPVEISRLPSLKRL 148
+ I P + L L +
Sbjct: 79 TDITP--LKNLTKLVDI 93
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.9 bits (165), Expect = 8e-13
Identities = 38/255 (14%), Positives = 76/255 (29%), Gaps = 32/255 (12%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+ ++G A+ + K + + L H L +
Sbjct: 20 KVILVREKATGRYYAM--KILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH 77
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+ V EYA G +F HL + + R R A + + + + V + +
Sbjct: 78 DRL--CFVMEYANGGELFFHLS---RERVFTEERARFYG--AEIVSALEYLHSRDVVYRD 130
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI--------ENSVLPPLADPETNIYS 568
+ + L D K+ + + + + +
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 569 FGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVI 628
G++M E++ G+LP+ + E+ L E F + P KS +
Sbjct: 191 LGVVMYEMMCGRLPFYNQ---DHERLFELILMEEIRFPRTLSPEAKSL-----------L 236
Query: 629 KECIKTDLRQRPTMN 643
+K D +QR
Sbjct: 237 AGLLKKDPKQRLGGG 251
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 67.1 bits (162), Expect = 1e-12
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 102 LQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPL 161
L+ N G +P+ L +L L L++S N L G IP + L NNK PL
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSPL 309
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 55.5 bits (132), Expect = 8e-09
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 125 DLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDD 176
DL NN++ G +P +++L L L + N G IP + + +
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYAN 300
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 52.4 bits (124), Expect = 7e-08
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 53 WNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP 112
+ ++ G L+ + LD++ + GTL L +L L L + N+ G IP
Sbjct: 226 IHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Query: 113 KELGELTKLELLDLSNNKL 131
+ G L + ++ +NNK
Sbjct: 286 -QGGNLQRFDVSAYANNKC 303
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 49.0 bits (115), Expect = 8e-07
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 31 EGMALLEFRTRVISDPFGVFSNWNKN-DSTPCLWSGVRCLN----GKVQMLDMKERSLEG 85
+ ALL+ + + +P S+W D W GV C +V LD+ +L
Sbjct: 7 DKQALLQIKKD-LGNP-TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPK 64
Query: 86 --TLAPDLGKLSDLRFLVLQKNH-FSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRL 142
+ L L L FL + + G IP + +LT+L L +++ +SG IP +S++
Sbjct: 65 PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
Query: 143 PSLKRLLLGNNKFEGSIPLELSRFT 167
+L L N G++P +S
Sbjct: 125 KTLVTLDFSYNALSGTLPPSISSLP 149
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.2 bits (155), Expect = 8e-12
Identities = 32/274 (11%), Positives = 75/274 (27%), Gaps = 36/274 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
T++K + +A+ D + + +++ L + HKN V L D
Sbjct: 17 TVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD 73
Query: 457 EPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSN 516
+VFE+ + L+ + + V H +
Sbjct: 74 --KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF-----LFQLLKGLGFCHSRNVLHRD 126
Query: 517 LSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI---------ENSVLPPLADPETNIY 567
L + + + K+A + + L +++
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 568 SFGILMLEIISGKLPYCEEKELS-------------IEKWAADYLNEPRNFSCMIDPSLK 614
S G + E+ + P ++ E+ P + P+
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246
Query: 615 SFKQ---NELEAICEVIKECIKTDLRQRPTMNDI 645
S ++++ +K + QR + +
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 62.2 bits (150), Expect = 6e-11
Identities = 33/283 (11%), Positives = 83/283 (29%), Gaps = 51/283 (18%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCED 455
+++ +++ ++ V K ++ ++++ L + N + L +D
Sbjct: 50 EVFEAINITNNEKVVV--------KILKPVKKKKIKREIKILENLRGGPNIITLADIVKD 101
Query: 456 DEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHS 515
+VFE+ N + L + L Y H + H
Sbjct: 102 PVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHR 153
Query: 516 NLSSHCIYLT-DDYAAKVAEICFTTIALPKSKVSDDI--------ENSVLPPLADPETNI 566
++ H + + + ++ + P + + + E V + D ++
Sbjct: 154 DVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDM 213
Query: 567 YSFGILMLEIISGKLPYCEE-----------KELSIEKWAADYLNEPRNFSCMIDPSLKS 615
+S G ++ +I K P+ K L E + L
Sbjct: 214 WSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGR 273
Query: 616 FKQNELEAIC-------------EVIKECIKTDLRQRPTMNDI 645
+ E + + + ++ D + R T +
Sbjct: 274 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.7 bits (146), Expect = 2e-10
Identities = 35/275 (12%), Positives = 93/275 (33%), Gaps = 36/275 (13%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
++ +G+ +AV ++ + + YR ++ L + H+N + L+
Sbjct: 33 SVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPA 89
Query: 457 EP---FNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVA 513
FN + + + + +I + L + +I L+Y+H + +
Sbjct: 90 RSLEEFNDVYLVTHLMGA---DLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADII 143
Query: 514 HSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDIENSVLPPLA------DPETNIY 567
H +L + + +D K+ + + P + + +I+
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 568 SFGILMLEIISGKLPYCEE-----------------KELSIEKWAADYLNEPRNFSCMID 610
S G +M E+++G+ + EL + + N ++ + M
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 263
Query: 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDI 645
+ + +++++ + D +R T
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.9 bits (136), Expect = 3e-09
Identities = 32/289 (11%), Positives = 90/289 (31%), Gaps = 51/289 (17%)
Query: 398 TIYKGT-LSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD 456
+ +A+ S ++ +++ + +NHKN ++L+
Sbjct: 32 IVCAAYDAVLDRNVAIK---KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88
Query: 457 EPF----NRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
+ + +V E LD ++ ++++H +
Sbjct: 89 KTLEEFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGI 140
Query: 513 AHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVSDDI-------ENSVLPPLADPETN 565
H +L I + D K+ + A ++ + +L +
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 200
Query: 566 IYSFGILMLEIISGKLPYCEEKEL-------------------SIEKWAADYLNE----- 601
I+S G +M E++ K+ + + ++ +Y+
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA 260
Query: 602 ----PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDII 646
P+ F + P+ + + +++ + + D +R +++D +
Sbjct: 261 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.0 bits (131), Expect = 8e-09
Identities = 22/75 (29%), Positives = 30/75 (40%)
Query: 95 SDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
D L LQ N + + + L L L L NNK+S I P + L L+RL L N+
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 155 FEGSIPLELSRFTLL 169
+ L
Sbjct: 91 LKELPEKMPKTLQEL 105
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.9 bits (115), Expect = 9e-07
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 111 IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
+PK+L LLDL NNK++ I + L +L L+L NNK P + L
Sbjct: 25 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 82
Query: 171 ELQFDD 176
L
Sbjct: 83 RLYLSK 88
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 4/159 (2%)
Query: 19 INNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDM 78
L L L L E ++ + + N+ V++
Sbjct: 75 FAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTN 134
Query: 79 KERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVE 138
+S G + L ++ + + + IP+ L L L L NK++ +
Sbjct: 135 PLKSS-GIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAAS 190
Query: 139 ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDY 177
+ L +L +L L N L+ L EL ++
Sbjct: 191 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN 229
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.2 bits (109), Expect = 1e-06
Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 26/123 (21%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKL------------ 121
++L + + L T+ L +L + L L N + P L L L
Sbjct: 1 RVLHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALEN 57
Query: 122 ----------ELLDLSNNKLSGIIPVE-ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLS 170
+ L L NN+L ++ + P L L L N ++ +L
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLP 117
Query: 171 ELQ 173
+
Sbjct: 118 SVS 120
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.6 bits (102), Expect = 8e-06
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 98 RFLVLQKNHFSGV-IPKELGELTKLELLDLSNNKLSGIIPVE---ISRLPSLKRLL 149
+ L+L N + L +L LL+L N L ++ LPS+ +L
Sbjct: 68 QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 123
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 48.1 bits (113), Expect = 1e-06
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
L LS L L N S + P L L L + L NN++S + P ++ +L +
Sbjct: 167 TPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222
Query: 149 LLGN 152
L N
Sbjct: 223 TLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 3e-05
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 46 PFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKN 105
P +N S + L ++ +K + + L L +L + L+ N
Sbjct: 146 PLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNN 205
Query: 106 HFSGVIPKELGELTKLELLDLSN 128
S V P L + L ++ L+N
Sbjct: 206 QISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 103 QKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLE 162
+ L L+KL L +NK+S I P ++ LP+L + L NN+ PL
Sbjct: 157 SIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLA 214
Query: 163 -LSRFTLLS 170
S +++
Sbjct: 215 NTSNLFIVT 223
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 6e-04
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
PD L++ + K++ + + + +L + L ++ I + L +L L
Sbjct: 14 PDPA-LANAIKIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTIEG--VQYLNNLIGL 68
Query: 149 LLGNNKF 155
L +N+
Sbjct: 69 ELKDNQI 75
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 46.7 bits (110), Expect = 2e-06
Identities = 16/134 (11%), Positives = 42/134 (31%), Gaps = 15/134 (11%)
Query: 398 TIYKGTLSSGVEIAV-----AATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGY 452
++ E V T+ K+ ++ + +R + L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG- 73
Query: 453 CEDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPV 512
V+ + N + E + KE+ + ++ + +H +
Sbjct: 74 ------LAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYH---RGI 124
Query: 513 AHSNLSSHCIYLTD 526
H +LS + + +++
Sbjct: 125 VHGDLSQYNVLVSE 138
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 45.4 bits (106), Expect = 7e-06
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
++ L+K + + + EL ++ + +N+ + + I LP++ +L L N
Sbjct: 23 FAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGN 78
Query: 154 KFEGSIPLE 162
K PL
Sbjct: 79 KLTDIKPLA 87
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 37.3 bits (85), Expect = 0.003
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 7/136 (5%)
Query: 20 NNLQGCW---SLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQML 76
N L +L G L+ S + L Q+
Sbjct: 78 NKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLE 137
Query: 77 DMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP 136
+ + + T L +L+ L L L+ N S ++P L LTKL+ L LS N +S +
Sbjct: 138 SLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRA 195
Query: 137 VEISRLPSLKRLLLGN 152
++ L +L L L +
Sbjct: 196 --LAGLKNLDVLELFS 209
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (107), Expect = 9e-06
Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG 133
Q LD+ ++L + L + ++ + + +++ +DLSN+ +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQG-VIAFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEV 60
Query: 134 I-IPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
+ +S+ L+ L L + I L++ + L L
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 102
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (88), Expect = 0.002
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 4/116 (3%)
Query: 50 FSNWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQK-NHFS 108
S + KN L + VR V + L+ + +L+ L+ L L +
Sbjct: 155 LSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 214
Query: 109 GVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELS 164
ELGE+ L+ L + G + + LP L+ + + F +
Sbjct: 215 PETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQ---INCSHFTTIARPTIG 267
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (106), Expect = 1e-05
Identities = 27/162 (16%), Positives = 45/162 (27%), Gaps = 14/162 (8%)
Query: 1 MGGRWNSIGFQFFCFLVLINNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTP 60
G R + ++ C + SN D+
Sbjct: 298 EGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 357
Query: 61 CLWSGVRCLNG-KVQMLDMKERSLEGT----LAPDLGKLSDLRFLVLQKNHFSGVIPKEL 115
G +++L + + + + LA L LR L L N +L
Sbjct: 358 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL 417
Query: 116 GE-----LTKLELLDLSNNKLSGIIPVEISRL----PSLKRL 148
E LE L L + S + + L PSL+ +
Sbjct: 418 VESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (103), Expect = 3e-05
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 95 SDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGIIPVEISR-----LPSL 145
S LR L L S + L L LDLSNN L +++ L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 146 KRLLLGNNKFEGSIPLEL 163
++L+L + + + L
Sbjct: 429 EQLVLYDIYWSEEMEDRL 446
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (103), Expect = 3e-05
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 73 VQMLDMKERSLEGTLAPDL-GKLSDLRFLVLQKNHFSGVIPKELGE----LTKLELLDLS 127
+Q LD++ L +L L + + L + K++ L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 128 NNKLSGIIPVEISRL-----PSLKRLLLGNNKF 155
+N+L + + + +++L L N
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 4e-05
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 96 DLRFLVLQKNHFSGVIPKELGE-LTKLELLDLSNNKLSGIIPVEISR----LPSLKRLLL 150
D++ L +Q S EL L + +++ L + L+ +IS P+L L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 151 GNNKFEGSIPLELSR 165
+N+ + +
Sbjct: 63 RSNELGDVGVHCVLQ 77
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (87), Expect = 0.003
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query: 119 TKLELLDLSNNKLSGI----IPVEISRLPSLKRLLLGNNKFEGSIPLELSRF-----TLL 169
+ L +L L++ +S + + SL+ L L NN + L+L LL
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 170 SELQFDDYLTSAEVA 184
+L D S E+
Sbjct: 429 EQLVLYDIYWSEEME 443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.1 bits (105), Expect = 1e-05
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 103 QKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKF 155
N+ + + L L L+ L L N L IP L L N +
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 111 IPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKF 155
+P +L +L LS N L + L +L L +
Sbjct: 25 LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAEL 67
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 44.4 bits (103), Expect = 3e-05
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 12/82 (14%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L L + N +P L +L S N L+ + + +LK+L + N
Sbjct: 283 PPSLEELNVSNNKLIE-LPALPPRLERL---IASFNHLAEVPEL----PQNLKQLHVEYN 334
Query: 154 KFEGSIPLELSRFTLLSELQFD 175
P + +L+ +
Sbjct: 335 PLR-EFPDIPES---VEDLRMN 352
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 41.0 bits (94), Expect = 3e-04
Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 102 LQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPL 161
N S I LE L++SNNKL + + P L+RL+ N +P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLA-EVPE 321
Query: 162 ELSRFTLLS 170
L
Sbjct: 322 LPQNLKQLH 330
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 38.7 bits (88), Expect = 0.002
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 9/95 (9%)
Query: 52 NWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI 111
N +++ + L ++ L++ L L +L L+ NH + +
Sbjct: 265 NLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRL---ERLIASFNHLAE-V 319
Query: 112 PKELGELTKLELLDLSNNKLSGIIPVEISRLPSLK 146
P+ L +L + N L P + L+
Sbjct: 320 PELPQNLKQL---HVEYNPLRE-FPDIPESVEDLR 350
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 5e-05
Identities = 10/103 (9%), Positives = 31/103 (30%)
Query: 52 NWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI 111
+ + + L+ + +L + + ++ + N+ +
Sbjct: 134 IQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELP 193
Query: 112 PKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNK 154
+ +LD+S ++ + + L L+ N K
Sbjct: 194 NDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (95), Expect = 9e-05
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 88 APDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKR 147
A R L L+ VI L + + +D S+N++ + L LK
Sbjct: 11 AAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKT 67
Query: 148 LLLGNNKFEGSIP 160
LL+ NN+
Sbjct: 68 LLVNNNRICRIGE 80
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 14/89 (15%)
Query: 102 LQKNHFSGVIPKELGE------LTKLELLDLSNNKLSGIIPVEI-----SRLPSLKRLLL 150
L S + + L+ L L N++ + ++P L L L
Sbjct: 250 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLEL 309
Query: 151 GNNKF--EGSIPLELSR-FTLLSELQFDD 176
N+F E + E+ F+ + D+
Sbjct: 310 NGNRFSEEDDVVDEIREVFSTRGRGELDE 338
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.3 bits (87), Expect = 0.002
Identities = 10/84 (11%), Positives = 22/84 (26%), Gaps = 5/84 (5%)
Query: 96 DLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSG----IIPVEISRLPSLKRLLLG 151
L+ + + L E ++ + LS N + + I+ L+
Sbjct: 9 SLKLDAITTEDEKS-VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 152 NNKFEGSIPLELSRFTLLSELQFD 175
+ LL +
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLK 91
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (94), Expect = 3e-04
Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 26/182 (14%)
Query: 19 INNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQMLDM 78
+ L +L+L+ L E + + + ++++ L G + L +
Sbjct: 101 FHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160
Query: 79 KERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELT------------------- 119
+ L L L+L +N + V P +L
Sbjct: 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220
Query: 120 -----KLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQF 174
L+ L L++N L++ +++ S+P L+ L L
Sbjct: 221 LAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAGRDLK-RLAA 278
Query: 175 DD 176
+D
Sbjct: 279 ND 280
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.1 bits (84), Expect = 0.004
Identities = 25/112 (22%), Positives = 41/112 (36%)
Query: 52 NWNKNDSTPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI 111
+ + N + G++ L + L+ L+ L++L LQ N +
Sbjct: 86 DLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145
Query: 112 PKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLEL 163
+L L L L N++S + L SL RLLL N+ P
Sbjct: 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 197
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 5e-04
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 105 NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRL 148
N + + P L LT LE LD+S+NK+S I +++L +L+ L
Sbjct: 160 NQVTDLKP--LANLTTLERLDISSNKVSDISV--LAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 38.1 bits (87), Expect = 0.002
Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 94 LSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153
L++ VL K + + + + +L ++ L + I + L +L ++ NN
Sbjct: 17 LAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNN 72
Query: 154 KFEGSIPLE 162
+ PL+
Sbjct: 73 QLTDITPLK 81
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 0.003
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 9/141 (6%)
Query: 17 VLINNLQGCWSLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPCLWSGVRCLNGKVQML 76
L + + + + + L R+ + N+ S + ++ L
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSL 70
Query: 77 DMKERSLEGT--LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGI 134
++ L ++ + K +L+ L L N + + KLE L L N LS
Sbjct: 71 NLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130
Query: 135 IPVE-------ISRLPSLKRL 148
+ R P L RL
Sbjct: 131 FRDQSTYISAIRERFPKLLRL 151
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 680 | |||
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.97 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.94 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.86 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.57 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.55 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.51 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.49 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.4 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.36 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.34 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.32 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.3 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.28 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.21 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.18 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.14 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.14 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.13 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.11 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.1 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.08 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.04 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 98.86 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.85 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 98.84 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 98.82 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.8 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.76 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 98.72 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 98.62 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.55 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.06 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.01 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.0 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.99 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 97.95 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 97.88 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.87 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 97.85 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.78 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 97.7 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 97.44 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.96 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.83 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 96.31 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 96.21 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 95.52 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.66 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 94.16 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 92.31 |
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.7e-48 Score=402.41 Aligned_cols=244 Identities=16% Similarity=0.304 Sum_probs=187.4
Q ss_pred cccCCCCCCeEEEEEeC-CC---CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SG---VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g---~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
++||+|+||+||+|+.. +| ..||||++..... ....++|.+|+++|++++|||||+++|+|.+++ ..++|
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--~~~iv 105 (299)
T d1jpaa_ 32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT----EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST--PVMII 105 (299)
T ss_dssp EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC----HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCEEE
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC----HHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--EEEEE
Confidence 68999999999999975 33 2578887754332 344568999999999999999999999998877 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
||||++|+|.+++... ...++|.++++|+.|||+||+|||+. +|+||||||+|||+|.++++||+|||+++.....
T Consensus 106 ~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~ 181 (299)
T d1jpaa_ 106 TEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 181 (299)
T ss_dssp EECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEccCC
Confidence 9999999999988743 34699999999999999999999998 9999999999999999999999999999876532
Q ss_pred CCcc-------------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccC
Q 005734 545 SKVS-------------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMID 610 (680)
Q Consensus 545 ~~~~-------------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 610 (680)
.... ...|+......+++++|||||||++|||+| |+.||.+....++...+....+. .
T Consensus 182 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~----~---- 253 (299)
T d1jpaa_ 182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL----P---- 253 (299)
T ss_dssp --------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC----C----
T ss_pred CCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC----C----
Confidence 2111 112233334567889999999999999998 89999876544444443322111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+.+++.++.+|+.+||+.||++||||+||++.|+++...
T Consensus 254 -----~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 254 -----PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----CCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence 1223346789999999999999999999999999998753
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-48 Score=391.93 Aligned_cols=243 Identities=16% Similarity=0.294 Sum_probs=189.5
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||+||+|++.++..||||++..... ..++|.+|++++++++|||||+++|+|.+++ ..++|||
T Consensus 9 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~--~~~lv~E 80 (263)
T d1sm2a_ 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFE 80 (263)
T ss_dssp EEEEEECCSSCCEEEEEETTTEEEEEEECCSSSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcC------cHHHHHHHHHHHHhcCCCCcccccceeccCC--ceEEEEE
Confidence 3488999999999999999899999999865332 2357999999999999999999999999877 5699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++... ...++|..+++|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+++.......
T Consensus 81 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~ 156 (263)
T d1sm2a_ 81 FMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156 (263)
T ss_dssp CCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC----------
T ss_pred ecCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCc
Confidence 99999999998744 35689999999999999999999998 999999999999999999999999999987653221
Q ss_pred c---------ccccccCCCCCCCCCCCCeeehhHHHHHHHhC-CCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V---------SDDIENSVLPPLADPETNIYSFGILMLEIISG-KLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~---------~~~~~~~~~~~~~s~~sDVySfGvvllElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....||......+++++|||||||++|||+|+ +.|+.......+.+.+....+. ..
T Consensus 157 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~-------~~------ 223 (263)
T d1sm2a_ 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL-------YK------ 223 (263)
T ss_dssp --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCC-------CC------
T ss_pred eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCC-------CC------
Confidence 1 12224444456788999999999999999995 5555543333333333332111 11
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
+..+..++.+++.+||+.||++||||+||+++|++|.+
T Consensus 224 p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 224 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 11223678999999999999999999999999999875
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-47 Score=389.42 Aligned_cols=248 Identities=23% Similarity=0.397 Sum_probs=192.4
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
.+.||+|+||+||+|++++ .||||++...... ....++|.+|++++++++|||||+++|++.++ ..++||||
T Consensus 13 ~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~---~~~lv~Ey 84 (276)
T d1uwha_ 13 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVTQW 84 (276)
T ss_dssp CSEEEECSSCEEEEEESSS--EEEEEECCCSSCC---TTHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred EEEEeeCCCcEEEEEEECC--EEEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeeeeEEEecc---EEEEEEec
Confidence 4889999999999998753 5999998654322 23456899999999999999999999998754 46899999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.++++... ..++|..+++|+.|||+||+|||+. +||||||||+|||+|+++.+||+|||+|+........
T Consensus 85 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~ 160 (276)
T d1uwha_ 85 CEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 160 (276)
T ss_dssp CCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred CCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence 99999999997443 4699999999999999999999998 9999999999999999999999999999876432111
Q ss_pred ----------ccccccCCC---CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHH-HHHHHHhcCCCCcccccCccc
Q 005734 548 ----------SDDIENSVL---PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIE-KWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 548 ----------~~~~~~~~~---~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~l 613 (680)
....||... ...++.++|||||||++|||+||+.||.+....... ..+..... .+.+
T Consensus 161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~---------~p~~ 231 (276)
T d1uwha_ 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL---------SPDL 231 (276)
T ss_dssp -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSC---------CCCG
T ss_pred ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCC---------CCcc
Confidence 111233221 234688999999999999999999999865433222 22222111 1222
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
......++.++.+++.+||+.||++||||+||++.|+.+....
T Consensus 232 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~ 274 (276)
T d1uwha_ 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274 (276)
T ss_dssp GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence 2223344578999999999999999999999999999987643
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.3e-48 Score=396.37 Aligned_cols=256 Identities=13% Similarity=0.254 Sum_probs=201.0
Q ss_pred CCHHHHHHHhhhhccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEE
Q 005734 375 LNRLELDTACEDFSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC 453 (680)
Q Consensus 375 ~~~~~l~~~~~~~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~ 453 (680)
+..+|+......+.+.||+|+||+||+|+.. +|+.||||+++.... ..++|.+|+++|++++|||||+++|+|
T Consensus 9 ~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~------~~~~~~~E~~il~~l~HpnIv~~~~~~ 82 (287)
T d1opja_ 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVC 82 (287)
T ss_dssp CCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc------hHHHHHHHHHHHHhCCCCCEecCCccE
Confidence 3334444333344589999999999999985 688999999864331 245799999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEc
Q 005734 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533 (680)
Q Consensus 454 ~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~ 533 (680)
.+++ ..++|||||++|+|.+++.......++|..+++|+.|||+||+|||+. +|+||||||+|||+|+++.+||+
T Consensus 83 ~~~~--~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~ 157 (287)
T d1opja_ 83 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVA 157 (287)
T ss_dssp CSSS--SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred eeCC--eeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEc
Confidence 9877 679999999999999999876667899999999999999999999998 99999999999999999999999
Q ss_pred ccccccccCCCCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCcc-ccccHHHHHHHHhcCCC
Q 005734 534 EICFTTIALPKSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEE-KELSIEKWAADYLNEPR 603 (680)
Q Consensus 534 DFGla~~~~~~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~-~~~~~~~~~~~~~~~~~ 603 (680)
|||+|+......... ...|+......+++++|||||||++|||+||..|+... ....+.+.+......
T Consensus 158 DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~-- 235 (287)
T d1opja_ 158 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM-- 235 (287)
T ss_dssp CCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC--
T ss_pred cccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCC--
Confidence 999999875432211 11233333456789999999999999999977765433 222232322221111
Q ss_pred CcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 604 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+.++.+|+.+||+.||++||||+||++.|+.+..
T Consensus 236 -----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~ 275 (287)
T d1opja_ 236 -----------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275 (287)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred -----------CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1122234678999999999999999999999999998754
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-48 Score=394.91 Aligned_cols=243 Identities=15% Similarity=0.222 Sum_probs=191.3
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||+||+|+++++..||||++..... ..++|.+|++++++++|||||+++|+|.++ ..++|||
T Consensus 17 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~---~~~iv~E 87 (272)
T d1qpca_ 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITE 87 (272)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEE
T ss_pred EeEEEecCCCcEEEEEEECCCCEEEEEEEccCcC------CHHHHHHHHHHHHhCCCCCEeEEEeeeccC---CeEEEEE
Confidence 3488999999999999999889999999864331 235799999999999999999999998754 3589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.......++|..+++|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+|+.......
T Consensus 88 y~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~ 164 (272)
T d1qpca_ 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (272)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred eCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCcc
Confidence 99999999988755555799999999999999999999998 999999999999999999999999999998753321
Q ss_pred cc---------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCC-CccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 VS---------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPY-CEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~~---------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...|+......+++++|||||||++|||+||..|+ .......+...+....+. . .
T Consensus 165 ~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~----~---------~ 231 (272)
T d1qpca_ 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM----V---------R 231 (272)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC----C---------C
T ss_pred ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC----C---------C
Confidence 11 11122222345688899999999999999966554 433323333333221111 0 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
+...+.++.+|+.+||+.||++||||+||++.|+++..
T Consensus 232 p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 12233678999999999999999999999999998643
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-46 Score=384.81 Aligned_cols=241 Identities=14% Similarity=0.283 Sum_probs=191.5
Q ss_pred c-ccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEE
Q 005734 389 N-IIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMV 464 (680)
Q Consensus 389 ~-~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 464 (680)
+ .||+|+||+||+|... ++..||||+++.... +...++|.+|+++|++++|||||+++|+|.++ ..++|
T Consensus 14 ~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~----~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~---~~~lv 86 (285)
T d1u59a_ 14 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---ALMLV 86 (285)
T ss_dssp EEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEE
T ss_pred CcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcC----HHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC---eEEEE
Confidence 5 4999999999999864 455799999864432 34467899999999999999999999999754 46899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
||||++|+|.+++... ...++|..+++|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 mE~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~ 162 (285)
T d1u59a_ 87 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 162 (285)
T ss_dssp EECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhccccc
Confidence 9999999999998543 34799999999999999999999998 9999999999999999999999999999877533
Q ss_pred CCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 545 SKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 545 ~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
.... ...|+....+.+++++|||||||++|||+| |+.||.+....++...+... ...
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~----~~~------- 231 (285)
T d1u59a_ 163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG----KRM------- 231 (285)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT----CCC-------
T ss_pred ccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----CCC-------
Confidence 2111 111222223456889999999999999998 99999875544444333321 111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
..+..++.++.+|+.+||+.+|++||||.+|++.|+.+.
T Consensus 232 --~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 232 --ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp --CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 112233468899999999999999999999999998764
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=379.99 Aligned_cols=241 Identities=18% Similarity=0.332 Sum_probs=194.7
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
|.+.||+|+||+||+|+.++++.||||+++.... ..++|.+|++++++++|||||+++|+|.+++ ..++|||
T Consensus 8 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~------~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~--~~~iv~E 79 (258)
T d1k2pa_ 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM------SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITE 79 (258)
T ss_dssp CCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS------CHHHHHHHHHHHHTCCCTTBCCEEEEECCSS--SEEEEEE
T ss_pred EeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC------CHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--ceEEEEE
Confidence 4589999999999999999899999999875432 2357999999999999999999999999877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.+++.... ..++|..+++|+.|+|+||+|||+. +|+||||||+|||+|+++.+||+|||+++.......
T Consensus 80 y~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~ 155 (258)
T d1k2pa_ 80 YMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 155 (258)
T ss_dssp CCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC
T ss_pred ccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCc
Confidence 999999999976443 4689999999999999999999998 999999999999999999999999999987653322
Q ss_pred ccc---------ccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 VSD---------DIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~~~---------~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
... ..|+......++.++|||||||++|||+| |+.||.+....++...+.... .. ..
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~----~~---~~------ 222 (258)
T d1k2pa_ 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RL---YR------ 222 (258)
T ss_dssp CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC----CC---CC------
T ss_pred eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC----CC---CC------
Confidence 111 11232233467889999999999999998 899998755444333332211 11 11
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
+...+.++.+++.+||+.||++||||+||++.|.+|
T Consensus 223 p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 223 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred cccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence 122336889999999999999999999999998764
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-46 Score=382.74 Aligned_cols=240 Identities=17% Similarity=0.268 Sum_probs=188.5
Q ss_pred cccCCCCCCeEEEEEeC---CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 389 NIIDTQSGCTIYKGTLS---SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~---~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.||+|+||+||+|.+. .++.||||+++.... .+...++|.+|+++|++++|||||+++|+|.++ ..+|||
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~---~~~lvm 86 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN---DPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVM 86 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS---SEEEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC---CHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC---CEEEEE
Confidence 47999999999999874 346799999864331 234457899999999999999999999999754 358999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|||++|+|.++++.. ..++|..+++|+.|||+||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 87 E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~ 161 (277)
T d1xbba_ 87 EMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161 (277)
T ss_dssp ECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EcCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhccccc
Confidence 999999999999754 4699999999999999999999998 99999999999999999999999999998765332
Q ss_pred Ccc------cccccCCC-----CCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 546 KVS------DDIENSVL-----PPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 546 ~~~------~~~~~~~~-----~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
... ...+.+.+ ...++.++|||||||++|||+| |+.||.+....++...+... ...
T Consensus 162 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~----~~~-------- 229 (277)
T d1xbba_ 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG----ERM-------- 229 (277)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT----CCC--------
T ss_pred cccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcC----CCC--------
Confidence 111 11122222 3456788999999999999998 89999875544443333221 111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
..+..++.++.+|+.+||+.||++||||++|+++|+..
T Consensus 230 -~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 230 -GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence 11223346889999999999999999999999988865
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-46 Score=383.71 Aligned_cols=246 Identities=18% Similarity=0.297 Sum_probs=189.2
Q ss_pred hccccCCCCCCeEEEEEeCCC-----CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 387 FSNIIDTQSGCTIYKGTLSSG-----VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g-----~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
..++||+|+||+||+|++++. ..||||++..... .....+|.+|++++++++|||||+++|+|.+.+ ..
T Consensus 11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~--~~ 84 (283)
T d1mqba_ 11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT----EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PM 84 (283)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SE
T ss_pred eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC----hHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC--ce
Confidence 458999999999999997532 3699998864332 334567999999999999999999999999877 67
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++|||||.+|++.+.+... ...++|.++++|+.|||+||+|||+. +|+||||||+|||+|.++.+||+|||+++..
T Consensus 85 ~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 85 MIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEEEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcc
Confidence 9999999999999988644 34799999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCc-----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCC-ccccccHHHHHHHHhcCCCCccccc
Q 005734 542 LPKSKV-----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYC-EEKELSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 542 ~~~~~~-----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (680)
...... ....||....+.++.++|||||||++|||+||..|+. +.....+.+.+....+.
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~-------- 232 (283)
T d1mqba_ 161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL-------- 232 (283)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC--------
T ss_pred cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCC--------
Confidence 532111 1122343345578889999999999999999766654 33323333333221111
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..+.+++.++.+|+.+||+.+|++||||.||++.|+++...
T Consensus 233 -----~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 233 -----PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp -----CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----CCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 11223346789999999999999999999999999998764
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-47 Score=386.97 Aligned_cols=251 Identities=14% Similarity=0.223 Sum_probs=195.2
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||+||+|+.+++..||||++..... ..++|.+|+.++++++|||||+++|+|.++ ..++|||
T Consensus 21 i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~---~~~lv~E 91 (285)
T d1fmka3 21 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---PIYIVTE 91 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEC
T ss_pred EeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC------CHHHHHHHHHHHHhcccCCEeEEEEEEecC---CeEEEEE
Confidence 4489999999999999999888999999864331 235799999999999999999999999654 4589999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|..++.......++|.++++|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+++.......
T Consensus 92 y~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~ 168 (285)
T d1fmka3 92 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 168 (285)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred ecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCCc
Confidence 99999999999765556799999999999999999999998 999999999999999999999999999987643221
Q ss_pred cc---------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCc-cccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 VS---------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCE-EKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~~---------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.. ...|+....+.+++++|||||||++|||+||..|+.. .....+...+...... ..
T Consensus 169 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~-------------~~ 235 (285)
T d1fmka3 169 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-------------PC 235 (285)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC-------------CC
T ss_pred eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC-------------CC
Confidence 11 1223333445778999999999999999997666543 3323333333221111 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCCCCCCC
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISPEQAVP 662 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~~~~~~ 662 (680)
+..+++++.+++.+||+.||++||+|++|+++|++......++..|
T Consensus 236 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p 281 (285)
T d1fmka3 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 281 (285)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCC
Confidence 1223467899999999999999999999999999987655544444
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-46 Score=379.57 Aligned_cols=243 Identities=19% Similarity=0.331 Sum_probs=190.8
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.+.||+|+||.||+|+++ |..||||+++... ..++|.+|++++++++|||||+++|+|.+++. ..++|||
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~-------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~~~lv~e 81 (262)
T d1byga_ 11 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTE 81 (262)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEEC
T ss_pred EeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCC-cEEEEEe
Confidence 4588999999999999995 7889999986432 23579999999999999999999999976432 4699999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
|+++|+|.++++.+....++|..+++|+.|||.||+|||+. +|+||||||+|||++.++.+|++|||+++.......
T Consensus 82 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~ 158 (262)
T d1byga_ 82 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 158 (262)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCCCc
Confidence 99999999999765445689999999999999999999998 999999999999999999999999999987653322
Q ss_pred cc-----cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 547 VS-----DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 547 ~~-----~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.. ...|+......+++++|||||||++|||+| |+.||......++...+....+. ..+...
T Consensus 159 ~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~-------------~~~~~~ 225 (262)
T d1byga_ 159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-------------DAPDGC 225 (262)
T ss_dssp ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC-------------CCCTTC
T ss_pred cccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-------------CCCccC
Confidence 21 223343334578999999999999999999 78888766555665555332111 112223
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..++.+++.+||+.||++||||.||+++|++++.
T Consensus 226 ~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 226 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence 3678999999999999999999999999998864
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-45 Score=379.42 Aligned_cols=245 Identities=16% Similarity=0.263 Sum_probs=194.0
Q ss_pred ccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||+||+|+.+ +++.||||++..... ....++|.+|++++++++||||++++++|...+ ..
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~--~~ 91 (301)
T d1lufa_ 18 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS----ADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PM 91 (301)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SC
T ss_pred eEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC----hHHHHHHHHHHHHHHhcCCCCcccceeeeccCC--ce
Confidence 489999999999999863 457899999864332 344678999999999999999999999999877 67
Q ss_pred EEEEEecCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005734 462 MMVFEYAPNGTVFEHLHIKE----------------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSS 519 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~----------------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp 519 (680)
++||||+++|+|.++++... ...++|..+++|+.|+|.||+|||+. +||||||||
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp 168 (301)
T d1lufa_ 92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 168 (301)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcc
Confidence 99999999999999986321 23589999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccccccccCCCCCc-----cc-----ccccCCCCCCCCCCCCeeehhHHHHHHHhCC-CCCCcccc
Q 005734 520 HCIYLTDDYAAKVAEICFTTIALPKSKV-----SD-----DIENSVLPPLADPETNIYSFGILMLEIISGK-LPYCEEKE 588 (680)
Q Consensus 520 ~NILld~~~~~ki~DFGla~~~~~~~~~-----~~-----~~~~~~~~~~~s~~sDVySfGvvllElltG~-~p~~~~~~ 588 (680)
+|||+|.++.+||+|||+++........ .. ..|+......+++++|||||||++|||+||. .||.+...
T Consensus 169 ~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~ 248 (301)
T d1lufa_ 169 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 248 (301)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred cceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH
Confidence 9999999999999999999876432111 11 1122233346789999999999999999986 56766554
Q ss_pred ccHHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 589 LSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.++...+.. . . .. ..+...+.++.+|+.+||+.+|++||||.||+++|++|.+
T Consensus 249 ~e~~~~v~~---~-~-~~--------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~ 301 (301)
T d1lufa_ 249 EEVIYYVRD---G-N-IL--------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301 (301)
T ss_dssp HHHHHHHHT---T-C-CC--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHc---C-C-CC--------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 444433322 1 1 11 1122334678999999999999999999999999999853
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=375.05 Aligned_cols=250 Identities=16% Similarity=0.300 Sum_probs=192.6
Q ss_pred hhhccccCCCCCCeEEEEEeCCC----CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 385 EDFSNIIDTQSGCTIYKGTLSSG----VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 385 ~~~~~~iG~G~~g~Vyk~~~~~g----~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
.+|+++||+|+||+||+|++.++ ..||||++.... .....++|.+|++++++++|||||+++|+|.+.+. .
T Consensus 29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-~ 103 (311)
T d1r0pa_ 29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-S 103 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCC----CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTT-E
T ss_pred eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc----CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCC-c
Confidence 35568999999999999997532 258888875322 13456789999999999999999999999876442 5
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++|||||++|+|.++++.. ...++|..+++++.|+|+||.|||+. +|+||||||+|||+|+++.+||+|||+++.
T Consensus 104 ~~lv~E~~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~ 179 (311)
T d1r0pa_ 104 PLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 179 (311)
T ss_dssp EEEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCC
T ss_pred eEEEEEEeecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhh
Confidence 79999999999999998744 34688999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcc------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccc-cccHHHHHHHHhcCCCCccc
Q 005734 541 ALPKSKVS------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEK-ELSIEKWAADYLNEPRNFSC 607 (680)
Q Consensus 541 ~~~~~~~~------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~ 607 (680)
........ ...|+......++.++||||||+++|||+||+.||.... ..++...+. .... .
T Consensus 180 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~---~g~~-~-- 253 (311)
T d1r0pa_ 180 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL---QGRR-L-- 253 (311)
T ss_dssp TTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHH---TTCC-C--
T ss_pred ccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHH---cCCC-C--
Confidence 65332111 111222334567899999999999999999888875432 222223222 2111 1
Q ss_pred ccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 608 MIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 608 ~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
.. +..++.++.+++.+||+.||++||+|.||+++|+++....
T Consensus 254 -~~------p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~ 295 (311)
T d1r0pa_ 254 -LQ------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295 (311)
T ss_dssp -CC------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred -CC------cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhh
Confidence 11 1223367899999999999999999999999999997653
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-44 Score=366.26 Aligned_cols=237 Identities=21% Similarity=0.313 Sum_probs=190.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|+.||||++....... ......+.+|++++++++|||||++++++.+++ ..++|||
T Consensus 11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~ivmE 86 (263)
T d2j4za1 11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILE 86 (263)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccC--hHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC--EEEEEEe
Confidence 389999999999999985 78999999986432111 223567899999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++... ..+++.....|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 87 y~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~ 161 (263)
T d2j4za1 87 YAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 161 (263)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCC
T ss_pred ecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCCcc
Confidence 99999999999643 3699999999999999999999998 999999999999999999999999999987653321
Q ss_pred c------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 547 V------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 547 ~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
. ....||......+++++|||||||++|||+||+.||.+........ ...+....+ +...
T Consensus 162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~---~i~~~~~~~-----------p~~~ 227 (263)
T d2j4za1 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK---RISRVEFTF-----------PDFV 227 (263)
T ss_dssp EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---HHHTTCCCC-----------CTTS
T ss_pred cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHH---HHHcCCCCC-----------CccC
Confidence 1 1122444445567899999999999999999999997654333322 222221111 1122
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+++.+++.+|++.||++|||++|+++
T Consensus 228 s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 228 TEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 367889999999999999999999986
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-45 Score=373.08 Aligned_cols=247 Identities=17% Similarity=0.224 Sum_probs=183.6
Q ss_pred hhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 385 EDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 385 ~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
++|. +.||+|+||+||+|+. .+|+.||||++...... +...+.|.+|++++++++|||||++++++.+......
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~ 80 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 80 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC---HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC---HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEE
Confidence 3454 8999999999999997 47899999998765432 3345679999999999999999999999976443257
Q ss_pred EEEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeecCCCCeEEccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIK--EMDHLDWNARMRIIMGTAYCLQYMHHEL--NPPVAHSNLSSHCIYLTDDYAAKVAEICF 537 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~--~~~~l~~~~rl~ia~~ia~gL~yLH~~~--~~~ivHrDlKp~NILld~~~~~ki~DFGl 537 (680)
++|||||++|+|.+++... ....+++..++.|+.|++.||+|||+.. ..+|+||||||+|||+++++.+||+|||+
T Consensus 81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~ 160 (269)
T d2java1 81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 160 (269)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHH
T ss_pred EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccc
Confidence 8999999999999998642 3457999999999999999999999862 23599999999999999999999999999
Q ss_pred ccccCCCCCcc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccccc
Q 005734 538 TTIALPKSKVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI 609 (680)
Q Consensus 538 a~~~~~~~~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (680)
++......... ...||......+++++|||||||++|||+||+.||.+....++...+.. .. ..
T Consensus 161 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~---~~--~~--- 232 (269)
T d2java1 161 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE---GK--FR--- 232 (269)
T ss_dssp HHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---TC--CC---
T ss_pred eeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHc---CC--CC---
Confidence 98875332211 1223333445678999999999999999999999986544333333222 11 10
Q ss_pred CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 610 DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 610 d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+.....++.+++.+||+.||++|||++|+++
T Consensus 233 -----~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 233 -----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 111122367899999999999999999999975
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-44 Score=364.79 Aligned_cols=237 Identities=14% Similarity=0.220 Sum_probs=183.0
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+.. +|+.||||++...... ...+.|.+|++++++++|||||++++++.+++ ..++||||
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~----~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~--~~~ivmEy 84 (271)
T d1nvra_ 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEY 84 (271)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc----hHHHHHHHHHHHHHhCCCCCEeeEeeeeccCc--eeEEEEec
Confidence 89999999999999974 7899999998754322 23456899999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC-
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK- 546 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~- 546 (680)
|++|+|.+++... ..+++.+...|+.|+++||+|||+. +|+||||||+|||+++++.+||+|||+|+.......
T Consensus 85 ~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~ 159 (271)
T d1nvra_ 85 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159 (271)
T ss_dssp CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCcc
Confidence 9999999999643 4799999999999999999999998 999999999999999999999999999987642211
Q ss_pred ----cccccccCCCC-----C-CCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 ----VSDDIENSVLP-----P-LADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ----~~~~~~~~~~~-----~-~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
.....+.|.+| . +.+.++||||+||++|||+||+.||....+...... ....... .. + .
T Consensus 160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~--~~~~~~~-~~----~----~ 228 (271)
T d1nvra_ 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DWKEKKT-YL----N----P 228 (271)
T ss_dssp CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHH--HHHTTCT-TS----T----T
T ss_pred ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHH--HHhcCCC-CC----C----c
Confidence 11112233333 2 345679999999999999999999976543222111 1111111 00 0 0
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
......++.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 229 WKKIDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1122357889999999999999999999865
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-45 Score=381.85 Aligned_cols=243 Identities=19% Similarity=0.342 Sum_probs=187.4
Q ss_pred hhccccCCCCCCeEEEEEeCC-C-----CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC
Q 005734 386 DFSNIIDTQSGCTIYKGTLSS-G-----VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~~~-g-----~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 458 (680)
.+.+.||+|+||+||+|+... + ..||||++..... ......|.+|++++.++ +|||||+++|+|.+.+
T Consensus 40 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~- 114 (325)
T d1rjba_ 40 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 114 (325)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred EEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC----HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC-
Confidence 345899999999999998742 2 3588887754321 23456799999999998 8999999999999887
Q ss_pred CceEEEEEecCCCChhhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKE---------------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNL 517 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~---------------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDl 517 (680)
..++|||||++|+|.++++.+. ...++|..++.|+.|||+||+|||+. +|+||||
T Consensus 115 -~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDl 190 (325)
T d1rjba_ 115 -PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 190 (325)
T ss_dssp -SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred -eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccC
Confidence 6799999999999999997542 13589999999999999999999998 9999999
Q ss_pred CCCCeeecCCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCcc
Q 005734 518 SSHCIYLTDDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEE 586 (680)
Q Consensus 518 Kp~NILld~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~ 586 (680)
||+|||++.++.+||+|||+|+......... ...|+......+++++|||||||++|||+| |+.||.+.
T Consensus 191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~ 270 (325)
T d1rjba_ 191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 270 (325)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred chhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999998765332211 112333334567899999999999999998 89999764
Q ss_pred cccc-HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 005734 587 KELS-IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLR 650 (680)
Q Consensus 587 ~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~ 650 (680)
.... +.+.+....+ + ..+..++.++.+|+.+||+.||++||||+||+++|.
T Consensus 271 ~~~~~~~~~~~~~~~----~---------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 271 PVDANFYKLIQNGFK----M---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp CCSHHHHHHHHTTCC----C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCC----C---------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 4322 2232222111 1 111223467899999999999999999999999986
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=364.34 Aligned_cols=235 Identities=18% Similarity=0.294 Sum_probs=188.6
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivmEy 98 (293)
T d1yhwa1 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVMEY 98 (293)
T ss_dssp EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEecccCh-----HHHHHHHHHHHHHhCCCCCEeeEeEEEEECC--EEEEEEEe
Confidence 7899999999999996 57999999998754322 2356899999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+++..+ .+++.+...|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+........
T Consensus 99 ~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~ 172 (293)
T d1yhwa1 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (293)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred cCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeecccccc
Confidence 9999999988643 589999999999999999999998 9999999999999999999999999999876533211
Q ss_pred c--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 S--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 ~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
. ...||......+++++||||+||++|||+||+.||.+.........+...... .+ ..+..
T Consensus 173 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~--~~---------~~~~~ 241 (293)
T d1yhwa1 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP--EL---------QNPEK 241 (293)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC--CC---------SSGGG
T ss_pred ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC--CC---------CCccc
Confidence 1 12234344556789999999999999999999999765433332222221111 01 01122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
...++.+++.+||+.||++|||++|+++
T Consensus 242 ~s~~~~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 3367889999999999999999999975
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.7e-44 Score=360.83 Aligned_cols=243 Identities=21% Similarity=0.305 Sum_probs=185.6
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecC--CCCceEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDD--EPFNRMM 463 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~l 463 (680)
|.+.||+|+||+||+|+.. ++..||||++..... .+...+.|.+|+++|++++|||||++++++.+. +....++
T Consensus 13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~i 89 (270)
T d1t4ha_ 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 89 (270)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEE
Confidence 4568999999999999975 688999999865432 234456799999999999999999999998642 2225689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec-CCCCeEEcccccccccC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT-DDYAAKVAEICFTTIAL 542 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~ki~DFGla~~~~ 542 (680)
|||||++|+|.+++... ..+++..+..|+.||++||+|||+. .++|+||||||+|||++ +++.+||+|||+|+...
T Consensus 90 vmE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 90 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 166 (270)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence 99999999999999643 3689999999999999999999987 23499999999999996 57899999999998755
Q ss_pred CCCCc------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 543 PKSKV------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 543 ~~~~~------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
..... ....||... +.+++++|||||||++|||+||+.||.+... ............. ...++
T Consensus 167 ~~~~~~~~GT~~Y~aPE~~~-~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~--~~~~~~~i~~~~~--~~~~~------ 235 (270)
T d1t4ha_ 167 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVK--PASFD------ 235 (270)
T ss_dssp TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTCC--CGGGG------
T ss_pred CCccCCcccCccccCHHHhC-CCCCCcCchhhHHHHHHHHHHCCCCCCCccc--HHHHHHHHHcCCC--CcccC------
Confidence 33221 112233332 3578899999999999999999999975432 2222222222111 00111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.....++.+++.+||+.||++|||++|+++
T Consensus 236 -~~~~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 236 -KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp -GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -ccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 112256889999999999999999999975
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-44 Score=367.66 Aligned_cols=238 Identities=18% Similarity=0.212 Sum_probs=188.9
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+.. +|..||||++.....+ ..+.|.+|+++|++++|||||++++++.+++ ..++|||
T Consensus 17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~lvmE 89 (288)
T d2jfla1 17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE-----ELEDYMVEIDILASCDHPNIVKLLDAFYYEN--NLWILIE 89 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSG-----GGGGTHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHH-----HHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--eEEEEEe
Confidence 378999999999999974 7899999998755422 2456899999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC--
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK-- 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~-- 544 (680)
||++|+|.+++... ...+++.++..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 90 y~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~ 165 (288)
T d2jfla1 90 FCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 165 (288)
T ss_dssp CCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH
T ss_pred cCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCcc
Confidence 99999999998643 34699999999999999999999998 9999999999999999999999999999765321
Q ss_pred ------CCcccccccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 545 ------SKVSDDIENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 545 ------~~~~~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
.+.....||.. ....+++++|||||||++|||+||+.||.+....+....+... ....+
T Consensus 166 ~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~--~~~~~-------- 235 (288)
T d2jfla1 166 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS--EPPTL-------- 235 (288)
T ss_dssp HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS--CCCCC--------
T ss_pred cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCC--------
Confidence 11112223322 2344688999999999999999999999876554444333221 11111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..+.....++.+++.+||+.||++|||++|+++
T Consensus 236 -~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 236 -AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp -SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111223367899999999999999999999875
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-44 Score=371.90 Aligned_cols=249 Identities=20% Similarity=0.383 Sum_probs=190.3
Q ss_pred hccccCCCCCCeEEEEEeC-CCC--EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCCceE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGV--EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~--~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 462 (680)
+.+.||+|+||+||+|++. +|. .||||++..... +...++|.+|+++|.++ +|||||+++|+|.+.+ ..+
T Consensus 14 ~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~ 87 (309)
T d1fvra_ 14 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS----KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLY 87 (309)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEE
T ss_pred EEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC----hHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC--eeE
Confidence 3489999999999999985 454 466666543221 23456799999999999 7999999999999887 789
Q ss_pred EEEEecCCCChhhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC
Q 005734 463 MVFEYAPNGTVFEHLHIK--------------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY 528 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~--------------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 528 (680)
+||||+++|+|.++++.. ....++|..+++++.|||+||.|||+. +|+||||||+|||++.++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCC
Confidence 999999999999999643 246799999999999999999999998 999999999999999999
Q ss_pred CeEEcccccccccCCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCC-CCCccccccHHHHHHHHhc
Q 005734 529 AAKVAEICFTTIALPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKL-PYCEEKELSIEKWAADYLN 600 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~-p~~~~~~~~~~~~~~~~~~ 600 (680)
.+||+|||+++......... ...|+......++.++|||||||++|||+||.. ||.+.....+...+. .
T Consensus 165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~---~ 241 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP---Q 241 (309)
T ss_dssp CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG---G
T ss_pred ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHH---h
Confidence 99999999998654221111 111222223456889999999999999999765 566544333333322 1
Q ss_pred CCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccCC
Q 005734 601 EPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINISP 657 (680)
Q Consensus 601 ~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~~ 657 (680)
. ... ..+...+.++.+|+.+||+.||++||||+||++.|+++.+...
T Consensus 242 ~-~~~---------~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~ 288 (309)
T d1fvra_ 242 G-YRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 288 (309)
T ss_dssp T-CCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred c-CCC---------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCc
Confidence 1 111 1112233689999999999999999999999999999976443
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-43 Score=366.47 Aligned_cols=238 Identities=16% Similarity=0.212 Sum_probs=188.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||++....... ....+.|.+|+++|++++|||||++++++.+++ ..++||||
T Consensus 21 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~iv~E~ 96 (309)
T d1u5ra_ 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS--NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEY 96 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCH--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccC--HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECC--EEEEEEEe
Confidence 7899999999999996 578899999987554322 344567999999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|..++..+ ..+++.++..|+.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+........
T Consensus 97 ~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~ 171 (309)
T d1u5ra_ 97 CLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF 171 (309)
T ss_dssp CSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCC
T ss_pred cCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCCCCcc
Confidence 9999998766433 4699999999999999999999998 9999999999999999999999999999876543322
Q ss_pred cc----ccccCCC---CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHH
Q 005734 548 SD----DIENSVL---PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNE 620 (680)
Q Consensus 548 ~~----~~~~~~~---~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 620 (680)
.+ ..||... ...++.++|||||||++|||+||+.||.+....... ........ ....+ ...
T Consensus 172 ~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~---~~i~~~~~--~~~~~-------~~~ 239 (309)
T d1u5ra_ 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL---YHIAQNES--PALQS-------GHW 239 (309)
T ss_dssp CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHHHSCC--CCCSC-------TTS
T ss_pred ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHH---HHHHhCCC--CCCCC-------CCC
Confidence 22 2233221 235788999999999999999999999765433222 22222211 00111 112
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 621 LEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 621 ~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
..++.+++.+||+.||++|||++|+++
T Consensus 240 s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 240 SEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 367899999999999999999999976
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-44 Score=366.45 Aligned_cols=244 Identities=17% Similarity=0.244 Sum_probs=182.5
Q ss_pred ccccCCCCCCeEEEEEeC--CC--CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTLS--SG--VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~--~g--~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
.+.||+|+||.||+|+.. ++ ..||||++...... .....++|.+|+++|++++|||||+++|+|.++ ..++
T Consensus 13 ~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~---~~~l 87 (273)
T d1u46a_ 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS--QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---PMKM 87 (273)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEE
T ss_pred EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec---chhe
Confidence 388999999999999863 33 36888887543321 134456899999999999999999999999764 3589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+++|++.+++.... ..++|..+++++.|+|+||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 88 v~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 88 VTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 999999999999886433 4699999999999999999999998 999999999999999999999999999998753
Q ss_pred CCCcc-----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCc
Q 005734 544 KSKVS-----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDP 611 (680)
Q Consensus 544 ~~~~~-----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 611 (680)
..... ...|+......+++++|||||||++|||+| |+.||.+....+...++ ........
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i---~~~~~~~~----- 235 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGERLP----- 235 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HTSCCCCC-----
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHH---HhCCCCCC-----
Confidence 32211 111222223456788999999999999998 89999865544443333 22221111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 005734 612 SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQV 652 (680)
Q Consensus 612 ~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i 652 (680)
.+...+.++.+++.+||+.||++||||.||.+.|++.
T Consensus 236 ----~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 236 ----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1122336789999999999999999999999999874
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-44 Score=370.91 Aligned_cols=241 Identities=14% Similarity=0.273 Sum_probs=189.9
Q ss_pred cccCCCCCCeEEEEEeC-CCC----EEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGV----EIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~----~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 463 (680)
++||+|+||+||+|+.. +|+ .||||++.... .....++|.+|++++++++|||||+++|+|.+++ .++
T Consensus 15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---~~~ 87 (317)
T d1xkka_ 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQL 87 (317)
T ss_dssp EEEEECSSEEEEEEEECC----CCEEEEEEEECC--------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS---EEE
T ss_pred eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---eeE
Confidence 89999999999999874 554 47777764322 1234567999999999999999999999998754 589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
++||+++|+|.+++... ...++|..+++|+.|||+||+|||+. +|+||||||+|||+|.++.+||+|||+|+....
T Consensus 88 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 163 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163 (317)
T ss_dssp EEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred EEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence 99999999999988754 35799999999999999999999998 999999999999999999999999999998753
Q ss_pred CCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 544 KSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 544 ~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
..... ...||....+.++.++|||||||++|||+| |+.||.+.....+...+....+.+
T Consensus 164 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~---------- 233 (317)
T d1xkka_ 164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---------- 233 (317)
T ss_dssp TCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCC----------
T ss_pred ccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC----------
Confidence 22211 112333334567899999999999999999 889998766555555544322111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.+..++.++.+|+.+||+.||++||||.||++.|+.+.
T Consensus 234 ---~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~ 271 (317)
T d1xkka_ 234 ---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271 (317)
T ss_dssp ---CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence 11223367899999999999999999999999998875
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-44 Score=365.54 Aligned_cols=244 Identities=15% Similarity=0.253 Sum_probs=184.9
Q ss_pred hccccCCCCCCeEEEEEeCC----CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceE
Q 005734 387 FSNIIDTQSGCTIYKGTLSS----GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~----g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 462 (680)
+.+.||+|+||.||+|+... +..||||++.... .....+.|.+|++++++++|||||+++|+|.++ ..+
T Consensus 11 l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---~~~ 83 (273)
T d1mp8a_ 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PVW 83 (273)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SCE
T ss_pred EEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---eEE
Confidence 34899999999999998742 3457777764332 134456799999999999999999999999653 468
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+||||+++|+|.+++... ...+++..++.++.||++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 84 iv~E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~ 159 (273)
T d1mp8a_ 84 IIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159 (273)
T ss_dssp EEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheecc
Confidence 999999999999987643 34689999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCCcc---------cccccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHHHHHHHHhcCCCCcccccCcc
Q 005734 543 PKSKVS---------DDIENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPS 612 (680)
Q Consensus 543 ~~~~~~---------~~~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 612 (680)
...... ...|+......++.++|||||||++|||+| |+.||.+....++.+.+......
T Consensus 160 ~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~----------- 228 (273)
T d1mp8a_ 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL----------- 228 (273)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-----------
T ss_pred CCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-----------
Confidence 321111 111222233567889999999999999998 89999876656655544332111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 613 LKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 613 l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
..+...+.++.+|+.+||+.||++|||++||++.|+++.+
T Consensus 229 --~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 229 --PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 0122234679999999999999999999999999998864
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-43 Score=368.92 Aligned_cols=254 Identities=13% Similarity=0.198 Sum_probs=189.1
Q ss_pred hhhc--cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCce
Q 005734 385 EDFS--NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 385 ~~~~--~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 461 (680)
++|. +.||+|+||+||+|+. .+|+.||||++...... .....+.+|+++|++++|||||+++++|.+++ +.
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~ 79 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EI 79 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCT----THHHHHHHHGGGGGGCCCTTBCCEEEEEECSS--EE
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCH----HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EE
Confidence 4565 8999999999999997 47899999998754322 23467899999999999999999999999887 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++|||||++|+|.+++... ..+++..+..++.|++.||.|||+.+ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 80 ~iVmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~ 155 (322)
T d1s9ja_ 80 SICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155 (322)
T ss_dssp EEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred EEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCcccc
Confidence 9999999999999999644 36999999999999999999999732 7999999999999999999999999999876
Q ss_pred CCCCC------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC-CCCc---------
Q 005734 542 LPKSK------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE-PRNF--------- 605 (680)
Q Consensus 542 ~~~~~------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~--------- 605 (680)
..... .....||......+++++||||+||++|||+||+.||.................. ....
T Consensus 156 ~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (322)
T d1s9ja_ 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235 (322)
T ss_dssp HHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------------
T ss_pred CCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccc
Confidence 42211 1122344444567899999999999999999999999754322111110000000 0000
Q ss_pred --c-cccCcc----------------cCCCC-HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 606 --S-CMIDPS----------------LKSFK-QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 606 --~-~~~d~~----------------l~~~~-~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. ...+.. ....+ .....++.+++.+|++.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp ----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0 000000 00000 0123578899999999999999999999873
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-43 Score=366.20 Aligned_cols=247 Identities=17% Similarity=0.315 Sum_probs=189.7
Q ss_pred hccccCCCCCCeEEEEEeC--------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCC
Q 005734 387 FSNIIDTQSGCTIYKGTLS--------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDE 457 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~--------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 457 (680)
+.+.||+|+||.||+|+.. ++..||||++..... .....++.+|+..+.++ +|||||+++|+|.+++
T Consensus 17 l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT----EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp EEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred EeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC----hHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 3489999999999999853 234799998865432 33456799999999998 8999999999999877
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 005734 458 PFNRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIY 523 (680)
Q Consensus 458 ~~~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 523 (680)
..++|||||++|+|.+++..+. ...+++.++++++.|+|.||+|||+. +||||||||+|||
T Consensus 93 --~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiL 167 (299)
T d1fgka_ 93 --PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 167 (299)
T ss_dssp --SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred --eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeeccccee
Confidence 6799999999999999997442 24689999999999999999999999 9999999999999
Q ss_pred ecCCCCeEEcccccccccCCCCCcc-----cc-----cccCCCCCCCCCCCCeeehhHHHHHHHh-CCCCCCccccccHH
Q 005734 524 LTDDYAAKVAEICFTTIALPKSKVS-----DD-----IENSVLPPLADPETNIYSFGILMLEIIS-GKLPYCEEKELSIE 592 (680)
Q Consensus 524 ld~~~~~ki~DFGla~~~~~~~~~~-----~~-----~~~~~~~~~~s~~sDVySfGvvllEllt-G~~p~~~~~~~~~~ 592 (680)
++.++.+||+|||+++......... .. .|+....+.+++++|||||||++|||+| |+.||.+.....+.
T Consensus 168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~ 247 (299)
T d1fgka_ 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247 (299)
T ss_dssp ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHH
Confidence 9999999999999998765322111 11 1222334578999999999999999998 68888765433333
Q ss_pred HHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 593 KWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 593 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
..+.. ..... .+...+.++.+|+.+||+.||++||||.||++.|++|...
T Consensus 248 ~~i~~----~~~~~---------~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~ 297 (299)
T d1fgka_ 248 KLLKE----GHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297 (299)
T ss_dssp HHHHT----TCCCC---------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHc----CCCCC---------CCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence 33322 11111 1112236789999999999999999999999999998654
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-43 Score=362.10 Aligned_cols=253 Identities=17% Similarity=0.238 Sum_probs=186.5
Q ss_pred ccccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC--CceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP--FNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lV~ 465 (680)
.+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+.+. ...++||
T Consensus 8 ~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEECCSSSEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccc------hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 47899999999999997 58899999885432 111223345556677899999999999986542 2468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHE-----LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~-----~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
|||++|+|.++++.. .++|..+++++.++|.||+|||+. ..++|+||||||+|||+|+++.+||+|||+++.
T Consensus 81 Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~ 157 (303)
T d1vjya_ 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred ecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccc
Confidence 999999999999753 589999999999999999999974 245999999999999999999999999999988
Q ss_pred cCCCCCcc-------cccccCCCCC-----------CCCCCCCeeehhHHHHHHHhCCCCCCccccc-----------cH
Q 005734 541 ALPKSKVS-------DDIENSVLPP-----------LADPETNIYSFGILMLEIISGKLPYCEEKEL-----------SI 591 (680)
Q Consensus 541 ~~~~~~~~-------~~~~~~~~~~-----------~~s~~sDVySfGvvllElltG~~p~~~~~~~-----------~~ 591 (680)
........ ...+.|.+|+ .++.++|||||||++|||+||..|+...... ..
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T d1vjya_ 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccch
Confidence 75332111 1112333332 1456799999999999999998876432110 01
Q ss_pred HHHHHHHhcCCCCcccccCcccCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhcc
Q 005734 592 EKWAADYLNEPRNFSCMIDPSLKS--FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINI 655 (680)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~ 655 (680)
.+......... ..+|.+.. ...+.+..+.+++.+||+.||++||||.||++.|+++...
T Consensus 238 ~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 238 VEEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHTTS-----CCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc-----ccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 11222222111 12222221 1234567799999999999999999999999999998653
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-42 Score=358.77 Aligned_cols=241 Identities=15% Similarity=0.262 Sum_probs=179.3
Q ss_pred hccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 387 FSNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
+.+.||+|+||+||+|+.. +|+.||||++...... .....+.+|+++|++++|||||++++++.+++ ..++||
T Consensus 13 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~--~~~lvm 86 (307)
T d1a06a_ 13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE----GKEGSMENEIAVLHKIKHPNIVALDDIYESGG--HLYLIM 86 (307)
T ss_dssp EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC--------------CHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh----hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEE
Confidence 3489999999999999975 7899999998754322 22456889999999999999999999999887 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeEEcccccccccC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTIAL 542 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~ki~DFGla~~~~ 542 (680)
|||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||+++...
T Consensus 87 E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~ 161 (307)
T d1a06a_ 87 QLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED 161 (307)
T ss_dssp CCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred eccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence 999999999999643 4699999999999999999999998 999999999999994 57899999999998765
Q ss_pred CCCCc-------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCC
Q 005734 543 PKSKV-------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKS 615 (680)
Q Consensus 543 ~~~~~-------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 615 (680)
..... ....||......+++++|||||||++|||+||+.||.+.....+...+ ...........
T Consensus 162 ~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i---~~~~~~~~~~~------ 232 (307)
T d1a06a_ 162 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI---LKAEYEFDSPY------ 232 (307)
T ss_dssp -----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HTTCCCCCTTT------
T ss_pred CCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHH---hccCCCCCCcc------
Confidence 33211 122244444456799999999999999999999999865433333322 22211111111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 616 FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 616 ~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
....+.++.+++.+|++.||++|||++|+++.
T Consensus 233 -~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 233 -WDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp -TTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -ccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 11223678899999999999999999999873
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-43 Score=358.30 Aligned_cols=237 Identities=17% Similarity=0.251 Sum_probs=187.8
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .+|+.||||++...... .....+.+.+|++++++++|||||++++++.+++ ..++|||
T Consensus 13 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~~ivmE 88 (288)
T d1uu3a_ 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHII--KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFGLS 88 (288)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHcc--CHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECC--EEEEEEE
Confidence 48999999999999997 47899999998643211 1223457999999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSK 546 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~ 546 (680)
||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+.......
T Consensus 89 y~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 89 YAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp CCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCCc
Confidence 99999999998644 3699999999999999999999998 999999999999999999999999999987652211
Q ss_pred c----------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCC
Q 005734 547 V----------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSF 616 (680)
Q Consensus 547 ~----------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 616 (680)
. ....||......++.++||||+||++|||+||+.||.+.....+.. ........+
T Consensus 164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~---~i~~~~~~~----------- 229 (288)
T d1uu3a_ 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ---KIIKLEYDF----------- 229 (288)
T ss_dssp ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHTTCCCC-----------
T ss_pred ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHH---HHHcCCCCC-----------
Confidence 1 1122333334567889999999999999999999998654333332 222221111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 617 KQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 617 ~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.....++.+|+.+||+.||++|||++|+.+
T Consensus 230 p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 230 PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred CccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence 1122357889999999999999999999754
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-43 Score=361.99 Aligned_cols=246 Identities=14% Similarity=0.251 Sum_probs=191.9
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCc
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFN 460 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 460 (680)
+.+.||+|+||+||+|++. ++..||||++..... ......|.+|++++++++|||||+++|+|...+ .
T Consensus 24 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~----~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~ 97 (308)
T d1p4oa_ 24 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--P 97 (308)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC----HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--S
T ss_pred EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccC----hHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC--c
Confidence 3488999999999999873 357899999864321 234567999999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEE
Q 005734 461 RMMVFEYAPNGTVFEHLHIK--------EMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKV 532 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~--------~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki 532 (680)
.++|||||++|+|.++++.. ....++|..+.+|+.++|+||+|||+. +|+||||||+|||+|+++++||
T Consensus 98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl 174 (308)
T d1p4oa_ 98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 174 (308)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEE
T ss_pred eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEE
Confidence 79999999999999998632 234689999999999999999999998 9999999999999999999999
Q ss_pred cccccccccCCCCCcc-----cccccCC-----CCCCCCCCCCeeehhHHHHHHHhCC-CCCCccccccHHHHHHHHhcC
Q 005734 533 AEICFTTIALPKSKVS-----DDIENSV-----LPPLADPETNIYSFGILMLEIISGK-LPYCEEKELSIEKWAADYLNE 601 (680)
Q Consensus 533 ~DFGla~~~~~~~~~~-----~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~-~p~~~~~~~~~~~~~~~~~~~ 601 (680)
+|||+++......... ...+++. ....+++++||||||+++|||+||+ .||.+....... ......
T Consensus 175 ~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~---~~i~~~ 251 (308)
T d1p4oa_ 175 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL---RFVMEG 251 (308)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH---HHHHTT
T ss_pred eecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHH---HHHHhC
Confidence 9999998765322111 1112232 2346788999999999999999985 667654433333 222221
Q ss_pred CCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 602 PRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 602 ~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
... ..+..++.++.+++.+||+.+|++||||++|+++|++..+
T Consensus 252 -~~~---------~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 252 -GLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp -CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -CCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 111 1122233679999999999999999999999999988754
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-42 Score=355.94 Aligned_cols=243 Identities=17% Similarity=0.206 Sum_probs=190.5
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||+|+. .+|+.||||++......... ....+.|.+|+++|++++|||||++++++.+++ ..++||
T Consensus 15 ~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~iv~ 92 (293)
T d1jksa_ 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 92 (293)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEE
Confidence 48999999999999997 57999999998754432211 122467999999999999999999999999887 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC----CeEEccccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY----AAKVAEICFTTIA 541 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ki~DFGla~~~ 541 (680)
|||++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++ .+|++|||+++..
T Consensus 93 E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 93 ELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 999999999999654 3699999999999999999999998 999999999999998776 4999999999876
Q ss_pred CCCCCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...|+......++.++|||||||++|||+||+.||.+....+....+ ............+
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i---~~~~~~~~~~~~~--- 241 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---SAVNYEFEDEYFS--- 241 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HTTCCCCCHHHHT---
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHH---HhcCCCCCchhcC---
Confidence 5322111 12233334456899999999999999999999999865533333222 2221111111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
....++.+++.+||+.||++|||++|+++
T Consensus 242 ----~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 242 ----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 12357889999999999999999999986
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.7e-42 Score=361.99 Aligned_cols=240 Identities=20% Similarity=0.245 Sum_probs=189.6
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+ ..++|||
T Consensus 31 ~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~-----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivmE 103 (350)
T d1koaa2 31 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMIYE 103 (350)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECCCS-----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEcccc-----hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEE
Confidence 38999999999999997 478999999986543 223467899999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~ki~DFGla~~~~~~ 544 (680)
||++|+|.+++.... ..+++.....|+.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++.....
T Consensus 104 ~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~ 179 (350)
T d1koaa2 104 FMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 179 (350)
T ss_dssp CCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred cCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence 999999999986433 4699999999999999999999998 999999999999995 4678999999999887543
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...||......++.++||||+||++|||+||+.||.+....+... ............. .
T Consensus 180 ~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~---~i~~~~~~~~~~~-------~ 249 (350)
T d1koaa2 180 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR---NVKSCDWNMDDSA-------F 249 (350)
T ss_dssp SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCCCSCCGG-------G
T ss_pred cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHH---HHHhCCCCCCccc-------c
Confidence 3221 112333334567889999999999999999999997654333332 2222211111111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 250 SGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp GGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1123578899999999999999999999874
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-43 Score=360.36 Aligned_cols=247 Identities=17% Similarity=0.262 Sum_probs=181.4
Q ss_pred hccccCCCCCCeEEEEEeC------CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCCC
Q 005734 387 FSNIIDTQSGCTIYKGTLS------SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEPF 459 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~------~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 459 (680)
+.+.||+|+||.||+|+.. +++.||||++..... ....+.|.+|++.+.++ +|+|||++++++.+.+.
T Consensus 17 ~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~----~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~- 91 (299)
T d1ywna1 17 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG- 91 (299)
T ss_dssp EEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-
T ss_pred EeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC----cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC-
Confidence 3489999999999999863 356899999864332 33456788898888887 69999999999876553
Q ss_pred ceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec
Q 005734 460 NRMMVFEYAPNGTVFEHLHIKE--------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT 525 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~~~l~~~~--------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 525 (680)
..++|||||++|+|.++++... ...++|.++++|+.|||+||+|||+. +|+||||||+|||+|
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~ 168 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 168 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeEC
Confidence 4699999999999999996432 24589999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccccccccCCCCCcc----------cccccCCCCCCCCCCCCeeehhHHHHHHHhCC-CCCCcccccc-HHH
Q 005734 526 DDYAAKVAEICFTTIALPKSKVS----------DDIENSVLPPLADPETNIYSFGILMLEIISGK-LPYCEEKELS-IEK 593 (680)
Q Consensus 526 ~~~~~ki~DFGla~~~~~~~~~~----------~~~~~~~~~~~~s~~sDVySfGvvllElltG~-~p~~~~~~~~-~~~ 593 (680)
+++.+||+|||+|+......... ...|+......+++++|||||||++|||+||. .||....... +..
T Consensus 169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~ 248 (299)
T d1ywna1 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 248 (299)
T ss_dssp GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99999999999998765322111 11122223356789999999999999999975 5676543222 222
Q ss_pred HHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 594 WAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 594 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
.+...... ..+...+.++.+++.+||+.||++||||+||+++|+++.+
T Consensus 249 ~~~~~~~~-------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 249 RLKEGTRM-------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCCCC-------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 22221111 0112233678999999999999999999999999999864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=5.7e-42 Score=360.84 Aligned_cols=240 Identities=14% Similarity=0.211 Sum_probs=190.8
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+++|++++|||||++++++.+++ ..++|||
T Consensus 34 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~ivmE 106 (352)
T d1koba_ 34 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLILE 106 (352)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEECCcc-----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEE
Confidence 38999999999999997 479999999987543 223457889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec--CCCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT--DDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~ki~DFGla~~~~~~ 544 (680)
||++|+|.+++... ...+++.+...|+.||+.||+|||+. +|+||||||+|||++ +++.+||+|||+|+.....
T Consensus 107 ~~~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~ 182 (352)
T d1koba_ 107 FLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 182 (352)
T ss_dssp CCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred cCCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCCC
Confidence 99999999987533 34699999999999999999999998 999999999999998 6789999999999887643
Q ss_pred CCcc-------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS-------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~-------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...|+......++.++||||+||++|||+||+.||.+.........+. ......... ..
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~---~~~~~~~~~-------~~ 252 (352)
T d1koba_ 183 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK---RCDWEFDED-------AF 252 (352)
T ss_dssp SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH---HCCCCCCSS-------TT
T ss_pred CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCCCCCcc-------cc
Confidence 3211 122344445668899999999999999999999998654333333222 221111110 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.....++.+|+.+||+.||++|||++|+++.
T Consensus 253 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1223678899999999999999999999763
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.1e-41 Score=346.89 Aligned_cols=243 Identities=19% Similarity=0.301 Sum_probs=190.4
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchh----hHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCce
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKD----WLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~----~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~ 461 (680)
.+.||+|+||+||+|+. .+|+.||||++....... ..+...+.+.+|++++++++ |||||++++++.+++ ..
T Consensus 8 ~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~--~~ 85 (277)
T d1phka_ 8 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FF 85 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EE
T ss_pred ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCc--ce
Confidence 38999999999999997 578999999987654221 12334567999999999997 999999999999887 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++|||||++|+|.+++..+ ..+++.+..+++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 86 ~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 160 (277)
T d1phka_ 86 FLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 160 (277)
T ss_dssp EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeEc
Confidence 9999999999999999654 3699999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCccc-------ccccC------CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccc
Q 005734 542 LPKSKVSD-------DIENS------VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCM 608 (680)
Q Consensus 542 ~~~~~~~~-------~~~~~------~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 608 (680)
........ ..|+. .....+++++||||+||+++||+||+.||.+.........+. ........
T Consensus 161 ~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~---~~~~~~~~- 236 (277)
T d1phka_ 161 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM---SGNYQFGS- 236 (277)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HTCCCCCT-
T ss_pred cCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHH---hCCCCCCC-
Confidence 54322111 11111 112346889999999999999999999998765433333222 22111111
Q ss_pred cCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 609 IDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 609 ~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
+.. ....+++.+++.+||+.||++|||++||++
T Consensus 237 --~~~----~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 237 --PEW----DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp --TTG----GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --ccc----ccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111 122367899999999999999999999865
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-42 Score=356.84 Aligned_cols=249 Identities=20% Similarity=0.294 Sum_probs=193.5
Q ss_pred hhccccCCCCCCeEEEEEe------CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecCCC
Q 005734 386 DFSNIIDTQSGCTIYKGTL------SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDDEP 458 (680)
Q Consensus 386 ~~~~~iG~G~~g~Vyk~~~------~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 458 (680)
.+.+.||+|+||.||+|++ .+++.||||++..... .....+|.+|+.++.++ +|||||+++|+|.+++
T Consensus 26 ~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~- 100 (311)
T d1t46a_ 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (311)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred EEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC----HHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC-
Confidence 4458999999999999986 3567899999865432 33456799999999999 6999999999999877
Q ss_pred CceEEEEEecCCCChhhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005734 459 FNRMMVFEYAPNGTVFEHLHIKE----------------MDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCI 522 (680)
Q Consensus 459 ~~~~lV~ey~~~GsL~~~l~~~~----------------~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NI 522 (680)
..++|||||++|+|.++++... ...+++..+++|+.|||+||+|||+. +||||||||+||
T Consensus 101 -~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NI 176 (311)
T d1t46a_ 101 -PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (311)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred -EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccc
Confidence 5799999999999999997432 23689999999999999999999998 999999999999
Q ss_pred eecCCCCeEEcccccccccCCCCCcc-----ccc-----ccCCCCCCCCCCCCeeehhHHHHHHHhC-CCCCCcccccc-
Q 005734 523 YLTDDYAAKVAEICFTTIALPKSKVS-----DDI-----ENSVLPPLADPETNIYSFGILMLEIISG-KLPYCEEKELS- 590 (680)
Q Consensus 523 Lld~~~~~ki~DFGla~~~~~~~~~~-----~~~-----~~~~~~~~~s~~sDVySfGvvllElltG-~~p~~~~~~~~- 590 (680)
+++.++.+|++|||+++......... ... |+....+.+++++|||||||++|||+|+ +.|+.......
T Consensus 177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~ 256 (311)
T d1t46a_ 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (311)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999998765332211 111 2222335678999999999999999994 55554433222
Q ss_pred HHHHHHHHhcCCCCcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhccC
Q 005734 591 IEKWAADYLNEPRNFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVINIS 656 (680)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~~~ 656 (680)
+.+.+....+.. .+...+.++.+|+.+||+.||++||||++|+++|+++...+
T Consensus 257 ~~~~i~~~~~~~-------------~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~~ 309 (311)
T d1t46a_ 257 FYKMIKEGFRML-------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (311)
T ss_dssp HHHHHHHTCCCC-------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCC-------------CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhccC
Confidence 233333322110 11122367899999999999999999999999999876543
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-42 Score=354.59 Aligned_cols=253 Identities=12% Similarity=0.166 Sum_probs=186.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
++||+|+||+||+|+. .+|+.||||++.............+.+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~--~~~ivmE~ 81 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVFDF 81 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEEEC
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCC--ceeehhhh
Confidence 6899999999999997 47899999998755432222223457899999999999999999999999887 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+++|++..+.. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~ 156 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 156 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence 99887776653 334688999999999999999999998 9999999999999999999999999999876532211
Q ss_pred c--------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC--cccccC------
Q 005734 548 S--------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN--FSCMID------ 610 (680)
Q Consensus 548 ~--------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d------ 610 (680)
. ...|+... ...++.++|||||||++|||+||+.||.+..+.+....+.+....+.. ......
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T d1ua2a_ 157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 236 (299)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhh
Confidence 1 11122222 235688999999999999999999999876655554444443322111 000000
Q ss_pred -cccCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 611 -PSLKSFK-----QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 611 -~~l~~~~-----~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
......+ .....++.+|+.+|++.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 0000111 1223578999999999999999999999863
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.1e-41 Score=351.55 Aligned_cols=237 Identities=18% Similarity=0.222 Sum_probs=189.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||++...... .....+.+.+|++++++++|||||++++++.+++ ..++||||
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--~~~ivmE~ 85 (316)
T d1fota_ 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV--RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMDY 85 (316)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEchHHcc--CHHHHHHHHHHHHHHHhccCcChhheeeeEeeCC--eeeeEeee
Confidence 8999999999999997 47999999998643211 1223467899999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|..++.... .+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+........
T Consensus 86 ~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 160 (316)
T d1fota_ 86 IEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160 (316)
T ss_dssp CCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred cCCccccccccccc--cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence 99999999986543 678999999999999999999998 9999999999999999999999999999987643322
Q ss_pred ccc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 548 SDD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 548 ~~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
... .||......+++++||||+||++|||+||+.||.+.....+. ........... .....
T Consensus 161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~---~~i~~~~~~~p-----------~~~s~ 226 (316)
T d1fota_ 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY---EKILNAELRFP-----------PFFNE 226 (316)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHHHCCCCCC-----------TTSCH
T ss_pred ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHH---HHHHcCCCCCC-----------CCCCH
Confidence 222 234344556789999999999999999999999875433332 22222221111 11225
Q ss_pred HHHHHHHHccccCCCCCC-----CHHHHHHH
Q 005734 623 AICEVIKECIKTDLRQRP-----TMNDIIVQ 648 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RP-----tm~ev~~~ 648 (680)
++.+++.+|++.||.+|| |++|+++.
T Consensus 227 ~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 227 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence 788999999999999996 89998764
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.6e-41 Score=346.80 Aligned_cols=249 Identities=15% Similarity=0.229 Sum_probs=194.2
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC--CceEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP--FNRMMV 464 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lV 464 (680)
.+.||+|+||+||+|+. .+|+.||||++......+ ......|.+|++++++++|||||++++++...+. ...++|
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lv 89 (277)
T d1o6ya_ 12 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIV 89 (277)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred eEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccC--HHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEE
Confidence 48999999999999996 579999999987543322 3445679999999999999999999999876542 136899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
|||+++|+|.+++... ..+++.+...|+.||+.||+|||+. +|+||||||+|||++.++..+++|||.++.....
T Consensus 90 mE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~ 164 (277)
T d1o6ya_ 90 MEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS 164 (277)
T ss_dssp EECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred EECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhhccc
Confidence 9999999999988644 3699999999999999999999998 9999999999999999999999999998765422
Q ss_pred CC-----------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCccc
Q 005734 545 SK-----------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSL 613 (680)
Q Consensus 545 ~~-----------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 613 (680)
.. .....||......+++++|||||||++|||+||+.||.+.... +.....+...........+
T Consensus 165 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~-- 239 (277)
T d1o6ya_ 165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV---SVAYQHVREDPIPPSARHE-- 239 (277)
T ss_dssp --------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHCCCCCGGGTSS--
T ss_pred cccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHH---HHHHHHHhcCCCCCchhcc--
Confidence 11 1112233334456788999999999999999999999865433 2233333332211111111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhh
Q 005734 614 KSFKQNELEAICEVIKECIKTDLRQRP-TMNDIIVQLRQVI 653 (680)
Q Consensus 614 ~~~~~~~~~~~~~l~~~C~~~~P~~RP-tm~ev~~~L~~i~ 653 (680)
..+.++.+++.+|++.||++|| |++++...|.++.
T Consensus 240 -----~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 240 -----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp -----SCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 2236788999999999999999 8999999998875
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.8e-41 Score=356.39 Aligned_cols=242 Identities=12% Similarity=0.118 Sum_probs=186.2
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhh-HHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDW-LKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.++||+|+||.||+|+.. +|+.||||++........ ..........|+++++.++|||||++++++.+.+ ..++||
T Consensus 9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~--~~~ivm 86 (364)
T d1omwa3 9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFIL 86 (364)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC--EEEEEE
Confidence 389999999999999975 799999999864332111 0111223345577888889999999999999887 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|||++|+|.+++... ..+++.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+|+......
T Consensus 87 E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~ 161 (364)
T d1omwa3 87 DLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 161 (364)
T ss_dssp CCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC
T ss_pred EecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCCCc
Confidence 999999999999644 3688999999999999999999998 99999999999999999999999999998765332
Q ss_pred Cc-c-----cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCH
Q 005734 546 KV-S-----DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQ 618 (680)
Q Consensus 546 ~~-~-----~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 618 (680)
.. . ...|+... ...+++++|||||||++|||+||+.||......+................ .
T Consensus 162 ~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~-----------~ 230 (364)
T d1omwa3 162 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP-----------D 230 (364)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCC-----------S
T ss_pred ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCC-----------C
Confidence 11 1 12233332 34578999999999999999999999986554444443333322221111 1
Q ss_pred HHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 619 NELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 619 ~~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
....++.+++.+||+.||++||| ++|+++
T Consensus 231 ~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 231 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 12357899999999999999999 577765
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-41 Score=346.86 Aligned_cols=255 Identities=13% Similarity=0.177 Sum_probs=188.0
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||++...... .....++.+|++++++++|||||++++++.+++ ..++||||
T Consensus 8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~--~~~iv~e~ 82 (298)
T d1gz8a_ 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEF 82 (298)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcC---hHHHHHHHHHHHHHHhCCCCcEEEecccccccc--ceeEEEee
Confidence 8999999999999997 57999999998643311 223457899999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+.+ ++.+.+.......+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+........
T Consensus 83 ~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~ 158 (298)
T d1gz8a_ 83 LHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 158 (298)
T ss_dssp CSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred cCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCccc
Confidence 965 556666555556799999999999999999999998 9999999999999999999999999999877533221
Q ss_pred c---cccccCC------CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCc--ccc-cCcc---
Q 005734 548 S---DDIENSV------LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNF--SCM-IDPS--- 612 (680)
Q Consensus 548 ~---~~~~~~~------~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~-~d~~--- 612 (680)
. ...+.+. ...+.+.++||||+||++|||+||+.||.+....+....+......+... ... ..+.
T Consensus 159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T d1gz8a_ 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238 (298)
T ss_dssp TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccc
Confidence 1 1112222 22356889999999999999999999998655433322222222221110 000 0000
Q ss_pred -cC---CC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHh
Q 005734 613 -LK---SF-----KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQV 652 (680)
Q Consensus 613 -l~---~~-----~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i 652 (680)
.. .. ......++.+++.+|++.||++|||++|+++. ++++
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~ 289 (298)
T d1gz8a_ 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289 (298)
T ss_dssp TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence 00 00 01123578899999999999999999999875 4444
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-41 Score=349.13 Aligned_cols=236 Identities=14% Similarity=0.176 Sum_probs=189.6
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||++...... .....+.+.+|+++|++++|||||++++++.+.+ ..++||||
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~iv~ey 86 (337)
T d1o6la_ 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII--AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVMEY 86 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEchhhcc--CHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc--ccccceec
Confidence 8999999999999997 57999999998653211 1223567899999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
|++|+|.+++.... .++......++.|++.||+|||+. +|+||||||+|||+|+++.+||+|||+|+........
T Consensus 87 ~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~ 161 (337)
T d1o6la_ 87 ANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161 (337)
T ss_dssp CTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred cCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccCCcc
Confidence 99999999986543 688999999999999999999999 9999999999999999999999999999876532211
Q ss_pred --------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHH
Q 005734 548 --------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQN 619 (680)
Q Consensus 548 --------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 619 (680)
....|+......+++++||||+||++|||+||+.||.+.....+.+. .......+ +..
T Consensus 162 ~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~---i~~~~~~~-----------p~~ 227 (337)
T d1o6la_ 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL---ILMEEIRF-----------PRT 227 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHHCCCCC-----------CTT
T ss_pred cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHH---HhcCCCCC-----------Ccc
Confidence 12234444556679999999999999999999999987554333332 22221111 112
Q ss_pred HHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 620 ELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 620 ~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
...++.+|+.+|++.||++||+ ++|+++
T Consensus 228 ~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence 2357889999999999999995 778776
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-41 Score=348.22 Aligned_cols=239 Identities=15% Similarity=0.214 Sum_probs=187.5
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||+||+|... +|+.||||++..+. .....+.+|+++|++++|||||++++++.+++ ..|+|||
T Consensus 10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~------~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~lvmE 81 (321)
T d1tkia_ 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG------TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFE 81 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc------ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEe
Confidence 388999999999999975 78899999987543 22346889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC--CCCeEEcccccccccCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD--DYAAKVAEICFTTIALPK 544 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~ki~DFGla~~~~~~ 544 (680)
||++|+|.+++... ...+++.+...|+.||+.||+|||+. +|+||||||+|||++. ...+||+|||+++.....
T Consensus 82 ~~~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~ 157 (321)
T d1tkia_ 82 FISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred cCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence 99999999999643 34699999999999999999999998 9999999999999985 458999999999876533
Q ss_pred CCcc--cccccCC-----CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 545 SKVS--DDIENSV-----LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 545 ~~~~--~~~~~~~-----~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
.... ...+.+. ....+++++||||+||++|||+||+.||......++...+ ......+..... ..
T Consensus 158 ~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i---~~~~~~~~~~~~---~~-- 229 (321)
T d1tkia_ 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI---MNAEYTFDEEAF---KE-- 229 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---HHTCCCCCHHHH---TT--
T ss_pred CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCCCChhhc---cC--
Confidence 2111 1122222 3345688899999999999999999999875543333322 222111111111 11
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
...++.+++.+|++.||++|||++|+++.
T Consensus 230 --~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 230 --ISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 12568899999999999999999999873
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.3e-40 Score=350.40 Aligned_cols=236 Identities=17% Similarity=0.207 Sum_probs=189.2
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||.||+|+. .+|+.||||++...... .....+.+.+|+++|++++|||||++++++.+.+ ..++|+||
T Consensus 47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~~v~e~ 122 (350)
T d1rdqe_ 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV--KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEY 122 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEchHHcc--CHHHHHHHHHHHHHHHHcCCCcEeeccccccccc--cccccccc
Confidence 8999999999999997 47999999998643211 1223457899999999999999999999999877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+.+|+|.+++.... .+++.....|+.||+.||.|||+. +||||||||+|||++.++.+||+|||+|+........
T Consensus 123 ~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~ 197 (350)
T d1rdqe_ 123 VAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 197 (350)
T ss_dssp CTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred ccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeeccccccc
Confidence 99999999996443 699999999999999999999998 9999999999999999999999999999987643322
Q ss_pred ccc-----cccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCCHHHHH
Q 005734 548 SDD-----IENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFKQNELE 622 (680)
Q Consensus 548 ~~~-----~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 622 (680)
... .|+......+++++|||||||++|||+||+.||.+.....+.. ......... +.....
T Consensus 198 ~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~---~i~~~~~~~-----------p~~~s~ 263 (350)
T d1rdqe_ 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE---KIVSGKVRF-----------PSHFSS 263 (350)
T ss_dssp CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHCCCCC-----------CTTCCH
T ss_pred ccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHH---HHhcCCCCC-----------CccCCH
Confidence 222 2333445567899999999999999999999998654333332 222221111 111235
Q ss_pred HHHHHHHHccccCCCCCC-----CHHHHHH
Q 005734 623 AICEVIKECIKTDLRQRP-----TMNDIIV 647 (680)
Q Consensus 623 ~~~~l~~~C~~~~P~~RP-----tm~ev~~ 647 (680)
++.+++.+|++.||.+|+ |++|+++
T Consensus 264 ~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 788999999999999994 8999875
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-41 Score=349.46 Aligned_cols=240 Identities=15% Similarity=0.230 Sum_probs=180.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC-CCCcccceeeEEecC--CCCceEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI-NHKNFVNLIGYCEDD--EPFNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~~~lV 464 (680)
++||+|+||+||+|+. .+|+.||||++... ..+.+|++++.++ +|||||++++++.+. .....|+|
T Consensus 18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~iv 87 (335)
T d2ozaa1 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 87 (335)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeccCeEEEEEEECCCCCEEEEEEECCc----------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEE
Confidence 5799999999999997 57899999998532 2467899987655 899999999998642 11257999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC---CCCeEEccccccccc
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD---DYAAKVAEICFTTIA 541 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~ki~DFGla~~~ 541 (680)
||||++|+|.+++..+....+++.+...|+.|++.||+|||+. +|+||||||+|||+++ ++.+||+|||+|+..
T Consensus 88 mEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 88 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeec
Confidence 9999999999999866556799999999999999999999998 9999999999999985 467999999999876
Q ss_pred CCCCCcc--cccccCCCC-----CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS--DDIENSVLP-----PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~--~~~~~~~~~-----~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...+.+.+| ..+++++||||+||++|||+||+.||.+.........+........ . .+.
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~-~------~~~ 237 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ-Y------EFP 237 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCS-S------SCC
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCC-C------CCC
Confidence 5432211 122333333 3467889999999999999999999976543333322222111100 0 000
Q ss_pred C-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 615 S-FKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 615 ~-~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
. .......++.+|+.+|++.||++|||+.|+++.
T Consensus 238 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 238 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp TTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0 012234678999999999999999999999874
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-41 Score=349.69 Aligned_cols=237 Identities=15% Similarity=0.189 Sum_probs=185.8
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHH-cCCCCcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLS-RINHKNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||+|+.. +|+.||||++...... .....+.+..|..++. .++|||||++++++.+++ ..++||
T Consensus 7 ~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~--~~yivm 82 (320)
T d1xjda_ 7 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFFVM 82 (320)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeEEecCCCcEEEEEEECCCCCEEEEEEEchhhcc--ChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC--ceeEEE
Confidence 489999999999999975 7899999998643211 1222345677777765 689999999999999887 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
|||++|+|.++++... .++..+...++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 83 Ey~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~ 157 (320)
T d1xjda_ 83 EYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 157 (320)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred eecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhccccc
Confidence 9999999999997543 689999999999999999999999 99999999999999999999999999998754322
Q ss_pred Ccc--------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccCCCC
Q 005734 546 KVS--------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLKSFK 617 (680)
Q Consensus 546 ~~~--------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 617 (680)
... ...|+......+++++|||||||++|||+||+.||.+.....+...+. .....+ +
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~---~~~~~~-----------p 223 (320)
T d1xjda_ 158 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR---MDNPFY-----------P 223 (320)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH---HCCCCC-----------C
T ss_pred ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH---cCCCCC-----------C
Confidence 111 112343445678899999999999999999999998755443333222 221111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 005734 618 QNELEAICEVIKECIKTDLRQRPTMN-DIIV 647 (680)
Q Consensus 618 ~~~~~~~~~l~~~C~~~~P~~RPtm~-ev~~ 647 (680)
.....++.+|+.+||+.||++||++. |+++
T Consensus 224 ~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 224 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence 12236788999999999999999996 6753
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.5e-40 Score=339.60 Aligned_cols=249 Identities=16% Similarity=0.172 Sum_probs=187.1
Q ss_pred cccCCCCCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEec
Q 005734 389 NIIDTQSGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEYA 468 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey~ 468 (680)
+.||+|+||+||+|+.++|+.||||++...... ....+.|.+|+.+|++++|||||++++++.+.+ ..++++||+
T Consensus 8 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~i~~e~~ 82 (286)
T d1ob3a_ 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEHL 82 (286)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEECC
T ss_pred cEEecCCCcEEEEEEeCCCCEEEEEEEehhhcC---hHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC--ceeEEEEee
Confidence 789999999999999999999999998654322 223467999999999999999999999999887 679999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCcc
Q 005734 469 PNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKVS 548 (680)
Q Consensus 469 ~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~~ 548 (680)
.++.+..+.. ....++......|+.||++||+|||+. +||||||||+|||++.++.+|++|||++..........
T Consensus 83 ~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 157 (286)
T d1ob3a_ 83 DQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (286)
T ss_dssp SEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred hhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCcccc
Confidence 8776666653 335799999999999999999999998 99999999999999999999999999998765322111
Q ss_pred ---cccccCC------CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC--Ccccc-----cCcc
Q 005734 549 ---DDIENSV------LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR--NFSCM-----IDPS 612 (680)
Q Consensus 549 ---~~~~~~~------~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~d~~ 612 (680)
...+.+. ....+++++||||+||+++||+||+.||.+..+.+....+......+. ..... .+..
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T d1ob3a_ 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (286)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccc
Confidence 1112222 234568999999999999999999999986544333332222222110 00000 0000
Q ss_pred c--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 613 L--------KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 613 l--------~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
. ..........+.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 0111223367889999999999999999999975
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-38 Score=336.64 Aligned_cols=257 Identities=14% Similarity=0.182 Sum_probs=184.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||+||+|.. .+|+.||||++..... .....+.+.+|+++|++++|||||+++++|...+. .+.++
T Consensus 24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 100 (346)
T d1cm8a_ 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ---SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 100 (346)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEchhhc---ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEE
Confidence 7899999999999996 4799999999864332 23445678999999999999999999999976542 14599
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
||||+ +++|..+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+++....
T Consensus 101 v~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 101 VMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 173 (346)
T ss_dssp EEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceeccCC
Confidence 99999 5678777653 3599999999999999999999998 999999999999999999999999999988764
Q ss_pred CCCcccccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-C------------
Q 005734 544 KSKVSDDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-N------------ 604 (680)
Q Consensus 544 ~~~~~~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~------------ 604 (680)
........+.+.+| .+.+.++||||+||+++||++|+.||.+................+. .
T Consensus 174 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (346)
T d1cm8a_ 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 253 (346)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHH
T ss_pred ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhh
Confidence 43322222333322 3568999999999999999999999976543333222222111100 0
Q ss_pred ----cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhcc
Q 005734 605 ----FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVINI 655 (680)
Q Consensus 605 ----~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~~ 655 (680)
........+..........+.+|+.+|+..||++|||++|+++. ++++...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~ 310 (346)
T d1cm8a_ 254 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 310 (346)
T ss_dssp HHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred hhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCc
Confidence 00000001111112223577899999999999999999999985 6665433
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-38 Score=329.95 Aligned_cols=253 Identities=14% Similarity=0.171 Sum_probs=182.6
Q ss_pred cccCCCCCCeEEEEEe-CC-CCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcC---CCCcccceeeEEecC---CCCc
Q 005734 389 NIIDTQSGCTIYKGTL-SS-GVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRI---NHKNFVNLIGYCEDD---EPFN 460 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~-g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~---~~~~ 460 (680)
+.||+|+||+||+|+. .+ ++.||||++........ ....+.+|+++++.+ +|||||+++++|... ....
T Consensus 13 ~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~ 89 (305)
T d1blxa_ 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 89 (305)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS---CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEE
T ss_pred EEEecccCeEEEEEEEECCCCEEEEEEEEehhhccch---HHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCce
Confidence 8999999999999997 34 66799999876543221 122355677666655 899999999998632 1125
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 461 RMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 461 ~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.++++||+++|.+..... .....+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 90 ~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~~~~ 165 (305)
T d1blxa_ 90 LTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 165 (305)
T ss_dssp EEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence 689999998876654443 4445789999999999999999999998 999999999999999999999999999887
Q ss_pred cCCCCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccccc----
Q 005734 541 ALPKSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMI---- 609 (680)
Q Consensus 541 ~~~~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 609 (680)
...... .....||......+++++||||+||++|||+||+.||.+..+.+....+......+.......
T Consensus 166 ~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (305)
T d1blxa_ 166 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 245 (305)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred hcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccc
Confidence 542211 112234444456789999999999999999999999987654444333333322211100000
Q ss_pred ---------CcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 610 ---------DPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 610 ---------d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
............+.+.+|+.+|++.||++|||++|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000011122234678899999999999999999999863
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-39 Score=330.43 Aligned_cols=233 Identities=14% Similarity=0.254 Sum_probs=178.0
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhH-HHHHHHHHHHHHHHHcCC--CCcccceeeEEecCCCCceEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWL-KSQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEPFNRMM 463 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~-~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~l 463 (680)
.++||+|+||+||+|+. .+|+.||||++......... ......+.+|++++++++ |||||++++++.+++ ..++
T Consensus 9 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~--~~~l 86 (273)
T d1xwsa_ 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SFVL 86 (273)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EEEE
T ss_pred eEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC--eEEE
Confidence 48999999999999997 47899999998654321110 011234678999999996 999999999999887 7899
Q ss_pred EEEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-CCCeEEccccccccc
Q 005734 464 VFEYAPN-GTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-DYAAKVAEICFTTIA 541 (680)
Q Consensus 464 V~ey~~~-GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~ki~DFGla~~~ 541 (680)
||||+.+ +++.+++..+ ..+++.....++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+|+..
T Consensus 87 v~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~ 161 (273)
T d1xwsa_ 87 ILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL 161 (273)
T ss_dssp EEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccceec
Confidence 9999976 6777777543 3699999999999999999999998 9999999999999985 479999999999876
Q ss_pred CCCCCcc-cccccCCCC------CCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCcccccCcccC
Q 005734 542 LPKSKVS-DDIENSVLP------PLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSCMIDPSLK 614 (680)
Q Consensus 542 ~~~~~~~-~~~~~~~~~------~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 614 (680)
....... ...+.+.+| .+.+.++||||+||++|||+||+.||.... +. ...... +.+.
T Consensus 162 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----~i----~~~~~~----~~~~-- 226 (273)
T d1xwsa_ 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-----EI----IRGQVF----FRQR-- 226 (273)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-----HH----HHCCCC----CSSC--
T ss_pred ccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-----HH----hhcccC----CCCC--
Confidence 5332111 112222222 234567899999999999999999997532 11 111111 1111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 615 SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 615 ~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.+.++.+++.+|++.||++|||++|+++
T Consensus 227 -----~s~~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 227 -----VSSECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp -----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----CCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 2257889999999999999999999976
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-38 Score=322.54 Aligned_cols=249 Identities=15% Similarity=0.162 Sum_probs=187.6
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEEe
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFEY 467 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ey 467 (680)
+.||+|+||+||+|+. .+|+.||||+++..... ......+.+|+.++++++|||||++++++.+.. ..++|+||
T Consensus 8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~--~~~iv~~~ 82 (292)
T d1unla_ 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFEF 82 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS---TTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCC---hHHHHHHHHHHHHHHhcCcCCEEeecccccccc--ceeEEeee
Confidence 7899999999999997 57899999998654422 234567999999999999999999999999887 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCCCc
Q 005734 468 APNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKSKV 547 (680)
Q Consensus 468 ~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~~~ 547 (680)
+.+++|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.++........
T Consensus 83 ~~~~~l~~~~~~--~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~ 157 (292)
T d1unla_ 83 CDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp CSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC
T ss_pred cccccccccccc--ccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCcc
Confidence 999998887753 34689999999999999999999998 9999999999999999999999999999887533221
Q ss_pred cc---cc-----ccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccc-cccHHHHHHHHhcCCCC--cc---cccC--
Q 005734 548 SD---DI-----ENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEK-ELSIEKWAADYLNEPRN--FS---CMID-- 610 (680)
Q Consensus 548 ~~---~~-----~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~-~~~~~~~~~~~~~~~~~--~~---~~~d-- 610 (680)
.. .. ++.. .....++++||||+||+++||+||+.||.... ..+....+......+.. .. ...+
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T d1unla_ 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccc
Confidence 11 11 1111 12346889999999999999999999975432 22222222222221110 00 0000
Q ss_pred --------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 611 --------PSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 611 --------~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
.............+.+|+.+|++.||++|||++||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0001112233457889999999999999999999976
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-38 Score=332.07 Aligned_cols=254 Identities=13% Similarity=0.170 Sum_probs=182.8
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCC--ceEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPF--NRMMVF 465 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~--~~~lV~ 465 (680)
+.||+|+||+||+|+. .+|+.||||++..... ....+.+.+|+++|++++|||||++++++...... ..++++
T Consensus 14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~ 89 (345)
T d1pmea_ 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH----QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV 89 (345)
T ss_dssp EECC---CCCEEEEEETTTCSEEEEEEECCTTC----HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEeeccCeEEEEEEECCCCcEEEEEEEehhcC----hHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEE
Confidence 8999999999999986 5899999999864332 23456789999999999999999999999754311 235566
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCCC
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPKS 545 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~~ 545 (680)
+|+.+|+|.+++... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 90 ~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~ 163 (345)
T d1pmea_ 90 THLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163 (345)
T ss_dssp EECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence 777899999999643 589999999999999999999998 99999999999999999999999999998764321
Q ss_pred Cc-----------ccccccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCCccc------
Q 005734 546 KV-----------SDDIENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRNFSC------ 607 (680)
Q Consensus 546 ~~-----------~~~~~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 607 (680)
.. ....|+.. ....+++++||||+||+++||+||+.||......+...........+.....
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T d1pmea_ 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243 (345)
T ss_dssp CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhh
Confidence 11 11123322 2234578899999999999999999999765433333222222221110000
Q ss_pred ------ccCcccCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHh
Q 005734 608 ------MIDPSLKSFK-----QNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQV 652 (680)
Q Consensus 608 ------~~d~~l~~~~-----~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i 652 (680)
...+.....+ .....++.+++.+|++.||++|||++|+++. +++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~ 301 (345)
T d1pmea_ 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301 (345)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 0000000000 1112468899999999999999999999975 4544
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-38 Score=333.66 Aligned_cols=254 Identities=13% Similarity=0.163 Sum_probs=181.6
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC----CCceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE----PFNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~~l 463 (680)
++||+|+||+||+|+.. +|+.||||++..... .+.+|+++|++++|||||++++++.... ..+.++
T Consensus 26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred eEEeeCcCeEEEEEEECCCCCEEEEEEECccch---------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 78999999999999974 799999999865431 2347999999999999999999986432 224689
Q ss_pred EEEecCCCChhhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEccccccccc
Q 005734 464 VFEYAPNGTVFEHLH-IKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIA 541 (680)
Q Consensus 464 V~ey~~~GsL~~~l~-~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~ 541 (680)
|||||++|.+....+ ......+++.++..|+.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++..
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~ 173 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhc
Confidence 999998764444332 12345799999999999999999999998 999999999999999775 8999999999876
Q ss_pred CCCCCccc--cc-----ccCC-CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCC-----------
Q 005734 542 LPKSKVSD--DI-----ENSV-LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEP----------- 602 (680)
Q Consensus 542 ~~~~~~~~--~~-----~~~~-~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~----------- 602 (680)
........ .. |+.. ....+++++||||+||++|||+||+.||......+....+.+....+
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~ 253 (350)
T d1q5ka_ 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253 (350)
T ss_dssp CTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC-
T ss_pred cCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccc
Confidence 53322111 11 2211 23467899999999999999999999997654333222222111110
Q ss_pred ---CCcccccCccc-CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhc
Q 005734 603 ---RNFSCMIDPSL-KSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVIN 654 (680)
Q Consensus 603 ---~~~~~~~d~~l-~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~ 654 (680)
..+.......+ .........++.+|+.+|++.||++|||+.|+++. ++++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp --CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred hhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence 00000000000 01112234678899999999999999999999864 555543
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-37 Score=323.51 Aligned_cols=252 Identities=15% Similarity=0.190 Sum_probs=180.9
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCC------CCce
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDE------PFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~~ 461 (680)
+.||+|+||+||+|+. .+|+.||||++...... ....+++.+|+++|++++||||+++++++.... ....
T Consensus 16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~ 92 (318)
T d3blha1 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI 92 (318)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----CT---TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc---hHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceE
Confidence 8999999999999997 58999999998654322 223456889999999999999999999986532 1246
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEccccccccc
Q 005734 462 MMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIA 541 (680)
Q Consensus 462 ~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~ 541 (680)
++||||++++.+..... ....++......|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 93 ~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~ 167 (318)
T d3blha1 93 YLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 167 (318)
T ss_dssp EEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceeeec
Confidence 89999998877665543 334688899999999999999999998 9999999999999999999999999999765
Q ss_pred CCCCCcc------------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCC-Cccc
Q 005734 542 LPKSKVS------------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPR-NFSC 607 (680)
Q Consensus 542 ~~~~~~~------------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~ 607 (680)
....... ...|+... ...+++++||||+||+++||+||+.||.+..+......+........ ....
T Consensus 168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 247 (318)
T d3blha1 168 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 247 (318)
T ss_dssp CC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhcc
Confidence 4221110 11122222 23578999999999999999999999987654444444444332211 1000
Q ss_pred ccC-cc----c---C--CCC-HH------HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 608 MID-PS----L---K--SFK-QN------ELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 608 ~~d-~~----l---~--~~~-~~------~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
-.+ .. + . ... .+ ....+.+|+.+|++.||++|||++|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp TCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence 000 00 0 0 000 11 12466789999999999999999999863
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.3e-38 Score=324.29 Aligned_cols=243 Identities=12% Similarity=0.175 Sum_probs=178.8
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCCCceEEEEE
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+.||+|+||.||+|+. .+|+.||||++..... ..++..|++++++++|+|+|..++.|...+. ..++|||
T Consensus 12 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~-~~~ivme 83 (299)
T d1ckia_ 12 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVME 83 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-------SCCHHHHHHHHHHSTTSTTCCCEEEEEEETT-EEEEEEE
T ss_pred eEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-------CHHHHHHHHHHHHccCCCcccEEEEEEecCC-EEEEEEE
Confidence 48899999999999997 5789999998765432 2357889999999998887776666644332 5789999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeec---CCCCeEEcccccccccCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLT---DDYAAKVAEICFTTIALP 543 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~ki~DFGla~~~~~ 543 (680)
|+ +|+|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++ .+..+||+|||+|+....
T Consensus 84 ~~-~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 84 LL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred Ec-CCchhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 99 56777766533 34799999999999999999999998 999999999999875 456799999999998753
Q ss_pred CCCcc---------------cccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHH----HHhcCCCC
Q 005734 544 KSKVS---------------DDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAA----DYLNEPRN 604 (680)
Q Consensus 544 ~~~~~---------------~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~----~~~~~~~~ 604 (680)
..... ...|+......+++++|||||||++|||+||+.||......+....+. .....+
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~-- 236 (299)
T d1ckia_ 159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 236 (299)
T ss_dssp TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC--
T ss_pred cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCC--
Confidence 22111 011222233457889999999999999999999997543322222211 111110
Q ss_pred cccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 005734 605 FSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVI 653 (680)
Q Consensus 605 ~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~ 653 (680)
.. ......+.++.+++.+||+.+|++||+++++.+.|+.+.
T Consensus 237 ~~--------~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 237 IE--------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp HH--------HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred hh--------HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 00 011122367899999999999999999999999998874
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-38 Score=328.15 Aligned_cols=241 Identities=14% Similarity=0.189 Sum_probs=181.9
Q ss_pred ccccCCCCCCeEEEEEe----CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC-CcccceeeEEecCCCCceE
Q 005734 388 SNIIDTQSGCTIYKGTL----SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-KNFVNLIGYCEDDEPFNRM 462 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~----~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~ 462 (680)
.+.||+|+||+||+|+. .+|+.||||++........ ....+.+.+|++++++++| |||+++++++.+.. ..+
T Consensus 29 ~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~--~~~ 105 (322)
T d1vzoa_ 29 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK-AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KLH 105 (322)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE-ESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EEE
T ss_pred EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccc-hHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC--cee
Confidence 38999999999999985 2588999999865431110 1123458899999999976 89999999999887 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccC
Q 005734 463 MVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIAL 542 (680)
Q Consensus 463 lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~ 542 (680)
+|+||+.+|+|.+++.... .++......++.|++.||+|||+. +|+||||||+|||+|.++.+||+|||+++...
T Consensus 106 ~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~ 180 (322)
T d1vzoa_ 106 LILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 180 (322)
T ss_dssp EEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred eeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhhhc
Confidence 9999999999999996543 567888899999999999999998 99999999999999999999999999998764
Q ss_pred CCCCc-c---ccc-----ccCC--CCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHH-HHHhcCCCCcccccC
Q 005734 543 PKSKV-S---DDI-----ENSV--LPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWA-ADYLNEPRNFSCMID 610 (680)
Q Consensus 543 ~~~~~-~---~~~-----~~~~--~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~d 610 (680)
..... . ... ++.. ....++.++||||+||+||||+||+.||......+....+ ..........
T Consensus 181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~----- 255 (322)
T d1vzoa_ 181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----- 255 (322)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC-----
T ss_pred ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCC-----
Confidence 22111 1 111 1111 1235688999999999999999999999765433333322 2222221111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 005734 611 PSLKSFKQNELEAICEVIKECIKTDLRQRPT-----MNDIIV 647 (680)
Q Consensus 611 ~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPt-----m~ev~~ 647 (680)
+.....++.+++.+|++.||++||| ++|+++
T Consensus 256 ------~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 256 ------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ------cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 1223368899999999999999995 788875
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-37 Score=326.57 Aligned_cols=259 Identities=12% Similarity=0.161 Sum_probs=186.3
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC---CceEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP---FNRMMV 464 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~lV 464 (680)
+.||+|+||+||+|+. .+|+.||||++...... ....+.+.+|+++|++++|||||++++++..... ...+++
T Consensus 24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i 100 (348)
T d2gfsa1 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS---IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100 (348)
T ss_dssp EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECchhcC---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEE
Confidence 7899999999999996 57999999998754321 2345678999999999999999999999864321 134677
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCCC
Q 005734 465 FEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALPK 544 (680)
Q Consensus 465 ~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~~ 544 (680)
++|+.+|+|.+++.. ..+++.....++.||+.||+|||+. +|+||||||+|||++.++.+|++|||++......
T Consensus 101 ~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 101 VTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174 (348)
T ss_dssp EEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred EEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccCcc
Confidence 888899999999853 3599999999999999999999998 9999999999999999999999999999766432
Q ss_pred CCcccc-----cccC-CCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcCCCC-cccccC-------
Q 005734 545 SKVSDD-----IENS-VLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNEPRN-FSCMID------- 610 (680)
Q Consensus 545 ~~~~~~-----~~~~-~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~d------- 610 (680)
...... .++. ....+.+.++||||+||++|||+||+.||.+.........+......... ......
T Consensus 175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 254 (348)
T d2gfsa1 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254 (348)
T ss_dssp GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHH
T ss_pred cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhh
Confidence 222111 2222 22345688999999999999999999999865544333333222221100 000000
Q ss_pred ----cccCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHhhccC
Q 005734 611 ----PSLKSF-----KQNELEAICEVIKECIKTDLRQRPTMNDIIVQ--LRQVINIS 656 (680)
Q Consensus 611 ----~~l~~~-----~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~--L~~i~~~~ 656 (680)
+..... ......++.+|+.+|++.||++|||++|+++. +++.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~ 311 (348)
T d2gfsa1 255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311 (348)
T ss_dssp HTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred hhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCc
Confidence 000000 01123568899999999999999999999973 55554433
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=6e-37 Score=315.03 Aligned_cols=245 Identities=10% Similarity=0.098 Sum_probs=186.6
Q ss_pred ccccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCC-CcccceeeEEecCCCCceEEEE
Q 005734 388 SNIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINH-KNFVNLIGYCEDDEPFNRMMVF 465 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~~~lV~ 465 (680)
.+.||+|+||+||+|+.. +|+.||||++..... ...+.+|++.+..++| +|++.+++++.++. ..++||
T Consensus 10 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~~vm 80 (293)
T d1csna_ 10 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVI 80 (293)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-------cHHHHHHHHHHHHhcCCCCCCEEEEEeecCC--ccEEEE
Confidence 478999999999999964 789999998754331 2346788899999965 89999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecC-----CCCeEEcccccccc
Q 005734 466 EYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTD-----DYAAKVAEICFTTI 540 (680)
Q Consensus 466 ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-----~~~~ki~DFGla~~ 540 (680)
||+ +|+|.+++... ...+++.++..|+.+++.||+|||+. +|+||||||+|||++. ++.+||+|||+|+.
T Consensus 81 e~~-~~~l~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~ 155 (293)
T d1csna_ 81 DLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 155 (293)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhh-ccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEE
Confidence 999 78999998643 34699999999999999999999998 9999999999999974 56799999999988
Q ss_pred cCCCCCc---------------ccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC--CC
Q 005734 541 ALPKSKV---------------SDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE--PR 603 (680)
Q Consensus 541 ~~~~~~~---------------~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~--~~ 603 (680)
....... ....|+......+++++|||||||++|||+||+.||.+................ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (293)
T d1csna_ 156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235 (293)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence 6532110 111233333456788899999999999999999999765433332222211110 00
Q ss_pred CcccccCcccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhc
Q 005734 604 NFSCMIDPSLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQLRQVIN 654 (680)
Q Consensus 604 ~~~~~~d~~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~L~~i~~ 654 (680)
... +.....+.++.+++..|++.+|++||+++.+.+.|+++..
T Consensus 236 ~~~--------~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~ 278 (293)
T d1csna_ 236 PLR--------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 278 (293)
T ss_dssp CHH--------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred ChH--------HhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence 000 0111223678899999999999999999999999988754
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.7e-36 Score=317.15 Aligned_cols=243 Identities=12% Similarity=0.187 Sum_probs=179.1
Q ss_pred cccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEE
Q 005734 389 NIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
+.||+|+||+||+|+. .+|+.||||+++... .+++.+|+++|++++ ||||+++++++........++|||
T Consensus 41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e 112 (328)
T d3bqca1 41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVK--------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 112 (328)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSSC--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEECHHH--------HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence 8999999999999997 578999999986432 346889999999995 999999999998654336799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC-CeEEcccccccccCCCC
Q 005734 467 YAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY-AAKVAEICFTTIALPKS 545 (680)
Q Consensus 467 y~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ki~DFGla~~~~~~~ 545 (680)
||++|+|.+.. ..++......++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+|+......
T Consensus 113 ~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~ 184 (328)
T d3bqca1 113 HVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 184 (328)
T ss_dssp CCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred ecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCCC
Confidence 99999998764 2589999999999999999999998 999999999999998655 68999999998765432
Q ss_pred Ccc-------cccccCCC-CCCCCCCCCeeehhHHHHHHHhCCCCCCcccc-ccHHHHHHHHh------------c-C-C
Q 005734 546 KVS-------DDIENSVL-PPLADPETNIYSFGILMLEIISGKLPYCEEKE-LSIEKWAADYL------------N-E-P 602 (680)
Q Consensus 546 ~~~-------~~~~~~~~-~~~~s~~sDVySfGvvllElltG~~p~~~~~~-~~~~~~~~~~~------------~-~-~ 602 (680)
... ...|+... ...++.++||||+||+++||++|+.||....+ .+....+...+ . . .
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 264 (328)
T d3bqca1 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD 264 (328)
T ss_dssp CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence 211 11223222 23468899999999999999999999965431 11111111110 0 0 0
Q ss_pred CCcccccCc-------c-cC-CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 005734 603 RNFSCMIDP-------S-LK-SFKQNELEAICEVIKECIKTDLRQRPTMNDIIV 647 (680)
Q Consensus 603 ~~~~~~~d~-------~-l~-~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~ 647 (680)
......... . .. ........++.+|+.+|++.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000000 0 00 011223467889999999999999999999986
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-36 Score=320.13 Aligned_cols=249 Identities=12% Similarity=0.170 Sum_probs=179.1
Q ss_pred cccCCCCCCeEEEEEeC-CCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcccceeeEEecCCC----CceEE
Q 005734 389 NIIDTQSGCTIYKGTLS-SGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNFVNLIGYCEDDEP----FNRMM 463 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~-~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~l 463 (680)
+.||+|+||+||+|... +|+.||||++...... ......+.+|++++++++|||||++++++...+. ...|+
T Consensus 23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~i 99 (355)
T d2b1pa1 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 99 (355)
T ss_dssp EECSCC--CEEEEEEETTTTEEEEEEEEESTTSS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcC---HHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEE
Confidence 79999999999999975 7999999998754321 3445678999999999999999999999975421 26799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEcccccccccCC
Q 005734 464 VFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTIALP 543 (680)
Q Consensus 464 V~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~~~~ 543 (680)
|||||.++ +.+.+. ..+++.....++.|++.||+|||+. +|+||||||+|||++.++..|++|||+++....
T Consensus 100 v~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~ 171 (355)
T d2b1pa1 100 VMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_dssp EEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhcccc
Confidence 99999665 444443 3589999999999999999999999 999999999999999999999999999887653
Q ss_pred CCC-------cccccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccccHHHHHHHHhcC---------------
Q 005734 544 KSK-------VSDDIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKELSIEKWAADYLNE--------------- 601 (680)
Q Consensus 544 ~~~-------~~~~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~~~~~~~~~~~~~--------------- 601 (680)
... .....|+......+++++||||+||+++||++|+.||.+.........+......
T Consensus 172 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T d2b1pa1 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_dssp ---------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHH
Confidence 221 1122344445567899999999999999999999999765433222222111111
Q ss_pred ----CCCc-----ccccCcccC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 602 ----PRNF-----SCMIDPSLK----SFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 602 ----~~~~-----~~~~d~~l~----~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.... ......... ........++.+|+.+|++.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 000000000 0112345678999999999999999999999864
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2e-32 Score=290.04 Aligned_cols=252 Identities=14% Similarity=0.167 Sum_probs=175.8
Q ss_pred ccccCCCCCCeEEEEEe-CCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-----------CCcccceeeEEec
Q 005734 388 SNIIDTQSGCTIYKGTL-SSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-----------HKNFVNLIGYCED 455 (680)
Q Consensus 388 ~~~iG~G~~g~Vyk~~~-~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~ 455 (680)
.+.||+|+||+||+|+. .+|+.||||+++... .....+.+|++++++++ |+|||++++++..
T Consensus 18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~------~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~ 91 (362)
T d1q8ya_ 18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK------VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 91 (362)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH------HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc------cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence 38999999999999997 579999999986432 23356788888888775 5789999999876
Q ss_pred CCCCceEEEEEecCCCCh-hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCC------
Q 005734 456 DEPFNRMMVFEYAPNGTV-FEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDY------ 528 (680)
Q Consensus 456 ~~~~~~~lV~ey~~~GsL-~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~------ 528 (680)
......+++++++..+.. ...........+++..+..++.||+.||+|||+.. +|+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~--~IvHrDlKp~NIll~~~~~~~~~~ 169 (362)
T d1q8ya_ 92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLI 169 (362)
T ss_dssp EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEE
T ss_pred ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc--CcccccCChhHeeeeccCcccccc
Confidence 544356777777765543 33333445567899999999999999999999832 899999999999998654
Q ss_pred CeEEcccccccccCCCCCccc-----ccccCCCCCCCCCCCCeeehhHHHHHHHhCCCCCCccccc---c----HHHHHH
Q 005734 529 AAKVAEICFTTIALPKSKVSD-----DIENSVLPPLADPETNIYSFGILMLEIISGKLPYCEEKEL---S----IEKWAA 596 (680)
Q Consensus 529 ~~ki~DFGla~~~~~~~~~~~-----~~~~~~~~~~~s~~sDVySfGvvllElltG~~p~~~~~~~---~----~~~~~~ 596 (680)
.++++|||.++.......... ..|+......+++++||||+||+++||+||+.||...... . +...+.
T Consensus 170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~ 249 (362)
T d1q8ya_ 170 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 249 (362)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHH
Confidence 389999999986653322221 2233333456789999999999999999999998643211 0 111111
Q ss_pred HHhcCC------------------CCcccccCc----------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 005734 597 DYLNEP------------------RNFSCMIDP----------SLKSFKQNELEAICEVIKECIKTDLRQRPTMNDIIVQ 648 (680)
Q Consensus 597 ~~~~~~------------------~~~~~~~d~----------~l~~~~~~~~~~~~~l~~~C~~~~P~~RPtm~ev~~~ 648 (680)
.+... .....+... ...........++.+|+.+|+..||.+|||++|+++.
T Consensus 250 -~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 250 -LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp -HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred -HhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11100 000000000 0012345667889999999999999999999999874
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.94 E-value=3.1e-27 Score=244.55 Aligned_cols=156 Identities=28% Similarity=0.483 Sum_probs=142.5
Q ss_pred CchHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCC--ccceeeeCC----CcEeEEEcCCCCCcc--cCCcccCCCCCCC
Q 005734 27 SLNLEGMALLEFRTRVISDPFGVFSNWNKNDSTPC--LWSGVRCLN----GKVQMLDMKERSLEG--TLAPDLGKLSDLR 98 (680)
Q Consensus 27 ~~~~~~~~ll~~~~~~~~~~~~~l~~W~~~~~~~c--~w~gv~c~~----~~l~~L~l~~~~l~g--~~p~~~~~l~~L~ 98 (680)
|.+.|++||++||+++. +|. .+++|.. +.||| .|.||+|+. .+|+.|+|++++++| .+|+++++|++|+
T Consensus 3 c~~~e~~aLl~~k~~~~-~~~-~l~sW~~-~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~ 79 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp SCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCHHHHHHHHHHHHHCC-CCC-cCCCCCC-CCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCcccc
Confidence 56789999999999985 553 6899974 45788 599999973 379999999999998 5899999999999
Q ss_pred EEEccC-ccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCc
Q 005734 99 FLVLQK-NHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 99 ~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
+|+|++ |+++|.+|..|++|++|++|+|++|++.+..|..+..+.+|+++++++|.+.+.+|..+++++.|+.+++++|
T Consensus 80 ~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n 159 (313)
T d1ogqa_ 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeecccc
Confidence 999996 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCC
Q 005734 178 LTSAEVAG 185 (680)
Q Consensus 178 ~~~g~~p~ 185 (680)
.++|.+|.
T Consensus 160 ~l~~~ip~ 167 (313)
T d1ogqa_ 160 RISGAIPD 167 (313)
T ss_dssp CCEEECCG
T ss_pred cccccccc
Confidence 99998886
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=9.5e-23 Score=194.70 Aligned_cols=169 Identities=8% Similarity=0.038 Sum_probs=120.3
Q ss_pred hccccCCCCCCeEEEEEeCCCCEEEEEEeeeccch-------------hhHHHHHHHHHHHHHHHHcCCCCcccceeeEE
Q 005734 387 FSNIIDTQSGCTIYKGTLSSGVEIAVAATAITSSK-------------DWLKSQEMAYRKQVDTLSRINHKNFVNLIGYC 453 (680)
Q Consensus 387 ~~~~iG~G~~g~Vyk~~~~~g~~vaVK~~~~~~~~-------------~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~ 453 (680)
..+.||+|+||+||+|+..+|+.||||++...... .........+.+|.+.+.+++|.+++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 35799999999999999999999999986532110 11122344567899999999999999887653
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeecCCCCeEEc
Q 005734 454 EDDEPFNRMMVFEYAPNGTVFEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHELNPPVAHSNLSSHCIYLTDDYAAKVA 533 (680)
Q Consensus 454 ~~~~~~~~~lV~ey~~~GsL~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ki~ 533 (680)
..+++|||++++.+.+ ++.....+++.++++|++|||+. +|+||||||+|||+++++ ++|+
T Consensus 84 ------~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~~-~~li 144 (191)
T d1zara2 84 ------GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEEG-IWII 144 (191)
T ss_dssp ------TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETTE-EEEC
T ss_pred ------CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCCC-EEEE
Confidence 2379999998765543 23334567899999999999998 999999999999999754 8999
Q ss_pred ccccccccCCCCCccccc---c--cCCCCCCCCCCCCeeehhHHHH
Q 005734 534 EICFTTIALPKSKVSDDI---E--NSVLPPLADPETNIYSFGILML 574 (680)
Q Consensus 534 DFGla~~~~~~~~~~~~~---~--~~~~~~~~s~~sDVySfGvvll 574 (680)
|||+|+............ . .......++.++||||..--++
T Consensus 145 DFG~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~~ 190 (191)
T d1zara2 145 DFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRIL 190 (191)
T ss_dssp CCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred ECCCcccCCCCCcHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHh
Confidence 999997754222111000 0 0011234567789998765443
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.57 E-value=4.4e-15 Score=140.81 Aligned_cols=137 Identities=22% Similarity=0.288 Sum_probs=79.1
Q ss_pred CCCccceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccC-CcccCCCCCCCEEEccCCcCCccCcc
Q 005734 59 TPCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVI-PKELGELTKLELLDLSNNKLSGIIPV 137 (680)
Q Consensus 59 ~~c~w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~ 137 (680)
+-|.|+.|.|. +++|+ .+|..+. +.+++|+|++|+|++.+ +..|.++++|+.|+|++|++.+..+.
T Consensus 6 C~C~~~~v~Cs----------~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~ 72 (192)
T d1w8aa_ 6 CHCEGTTVDCT----------GRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPN 72 (192)
T ss_dssp SEEETTEEECT----------TSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTT
T ss_pred CEEcCCEEEEe----------CCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccc
Confidence 34667777665 33444 3444432 45666666666665433 34456666666666666666666666
Q ss_pred ccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 138 EISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
.+..+++|++|+|++|+++...|..|.++++|++|+|++|.+++..|. .|..+..+..++++.|.+.
T Consensus 73 ~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~-------------~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 73 AFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG-------------SFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp TTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTT-------------SSTTCTTCCEEECTTCCBC
T ss_pred ccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHH-------------HhcCCcccccccccccccc
Confidence 666666666666666666655555566666666666666666654333 2334445555666666665
Q ss_pred CCcc
Q 005734 218 GSSE 221 (680)
Q Consensus 218 ~~~~ 221 (680)
....
T Consensus 140 ~~~~ 143 (192)
T d1w8aa_ 140 CNCH 143 (192)
T ss_dssp CSGG
T ss_pred cccc
Confidence 5443
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.55 E-value=1.7e-15 Score=155.30 Aligned_cols=194 Identities=24% Similarity=0.332 Sum_probs=152.3
Q ss_pred CcEeEEEcCC-CCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKE-RSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~-~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++|+|++ |+++|.+|++|++|++|++|+|++|+|.+..|..+..+..|+.+++++|++.+.+|..+.++++|+.++
T Consensus 76 ~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~ 155 (313)
T d1ogqa_ 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceee
Confidence 5789999997 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccCChhhcCCCCC-CeeeccCcccccccCCcccccc---------------------------------ccCC
Q 005734 150 LGNNKFEGSIPLELSRFTLL-SELQFDDYLTSAEVAGIRSVNR---------------------------------KFGQ 195 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L-~~L~l~~N~~~g~~p~~~~~~~---------------------------------~~~~ 195 (680)
+++|.++|.+|..++.+..+ +.+++++|.++|..|....... .+..
T Consensus 156 l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 235 (313)
T d1ogqa_ 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999876 8899999999887775321100 0011
Q ss_pred cccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCCCCC-CCccccccCCCC-CCC
Q 005734 196 YGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPATVGS-SSDQVIALPTSR-SSG 270 (680)
Q Consensus 196 ~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~~~~-~~~~~~~~~~~~-~~g 270 (680)
....+.....+..++++.|+++|.+|..++ .+.+++ .+.+++|++.+..+.... ..++...+..|. ++|
T Consensus 236 ~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~----~L~~L~--~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g 306 (313)
T d1ogqa_ 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLT----QLKFLH--SLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGG----GCTTCC--EEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEES
T ss_pred cccccccccccccccCccCeecccCChHHh----CCCCCC--EEECcCCcccccCCCcccCCCCCHHHhCCCccccC
Confidence 113445567778899999999999998776 222232 455678888865444322 234555566664 344
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.51 E-value=4.6e-14 Score=133.62 Aligned_cols=114 Identities=21% Similarity=0.285 Sum_probs=104.2
Q ss_pred CcEeEEEcCCCCCcccCC-cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERSLEGTLA-PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..++.|+|++|.|++.++ ..|..+++|+.|+|++|.+.+..+..+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 578999999999987664 5679999999999999999999999999999999999999999987788899999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
|++|+|++..|..|..+++|++|+|++|.+.....
T Consensus 109 L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~ 143 (192)
T d1w8aa_ 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccccccCHHHhcCCcccccccccccccccccc
Confidence 99999998778889999999999999998876443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=7.3e-14 Score=139.43 Aligned_cols=138 Identities=22% Similarity=0.179 Sum_probs=95.2
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.|+|++|.+++..+..|.++++|++|+|++|+|+. +| .++.+++|++|+|++|+++ .+|..+..+++|+.|+++
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccccccccccc-cccccccccccccccccc
Confidence 57777777777776555667777778888888777763 44 3567777778888877777 456667777777777777
Q ss_pred CCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+|.+.+..+..+..+.+|+.|++++|.++...+. .+..+..+..+++++|++++..+..+.
T Consensus 109 ~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~-------------~~~~l~~l~~l~l~~N~l~~~~~~~~~ 169 (266)
T d1p9ag_ 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPG-------------LLTPTPKLEKLSLANNNLTELPAGLLN 169 (266)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTT-------------TTTTCTTCCEEECTTSCCSCCCTTTTT
T ss_pred ccccceeeccccccccccccccccccccceeccc-------------cccccccchhcccccccccccCccccc
Confidence 7777765666667777777777777777643332 233445566677777777766655444
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.40 E-value=5.4e-13 Score=116.42 Aligned_cols=102 Identities=27% Similarity=0.400 Sum_probs=89.4
Q ss_pred eEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCC
Q 005734 74 QMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNN 153 (680)
Q Consensus 74 ~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 153 (680)
+.|+|++|+++ .++ .+..++.|++|++++|.|+ .+|+.++.+++|+.|++++|.++ .+| .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 47899999998 444 5899999999999999998 67888999999999999999999 566 4899999999999999
Q ss_pred cccccCC--hhhcCCCCCCeeeccCccccc
Q 005734 154 KFEGSIP--LELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 154 ~l~g~~P--~~l~~l~~L~~L~l~~N~~~g 181 (680)
+++. +| ..++.+++|++|++++|.++.
T Consensus 76 ~i~~-~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQQ-SAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCCS-SSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccCC-CCCchhhcCCCCCCEEECCCCcCCc
Confidence 9984 43 468999999999999998874
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=1.1e-12 Score=131.97 Aligned_cols=141 Identities=17% Similarity=0.158 Sum_probs=87.9
Q ss_pred cEeEEEcC-CCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 72 KVQMLDMK-ERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 72 ~l~~L~l~-~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+..++.. .+.++...+..+.++++|++|++++|.+....+..+..+.+|+.+++++|++++..+..|..+++|+.|++
T Consensus 81 ~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l 160 (284)
T d1ozna_ 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (284)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhccc
Confidence 34444443 44444444556666777777777777766555556666677777777777776544555666667777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++|++++..|..|.++++|+.+++++|.+++..|. .|..+.+++.++++.|++.+..+..+.
T Consensus 161 ~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~-------------~f~~l~~L~~L~l~~N~i~~~~~~~~~ 222 (284)
T d1ozna_ 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH-------------AFRDLGRLMTLYLFANNLSALPTEALA 222 (284)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-------------TTTTCTTCCEEECCSSCCSCCCHHHHT
T ss_pred ccCcccccchhhhccccccchhhhhhccccccChh-------------Hhhhhhhcccccccccccccccccccc
Confidence 77777665566666677777777777766655444 244445556666666666666665554
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.34 E-value=4.2e-12 Score=128.93 Aligned_cols=201 Identities=20% Similarity=0.234 Sum_probs=127.6
Q ss_pred CCCccceeeeCC-----------CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEcc
Q 005734 59 TPCLWSGVRCLN-----------GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLS 127 (680)
Q Consensus 59 ~~c~w~gv~c~~-----------~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls 127 (680)
|-|.|++|.|.+ ..+++|+|++|.++...+..|.++++|++|++++|.+....|..|.++++|+.|+++
T Consensus 8 c~c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 8 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 447899999963 468899999999986655689999999999999999998888899999999999999
Q ss_pred CCcCCccCccccCCCCCCcEEEccCCcccc--------------------------cCChhhcCCCCCCeeeccCccccc
Q 005734 128 NNKLSGIIPVEISRLPSLKRLLLGNNKFEG--------------------------SIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 128 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--------------------------~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
+|+++ .+|..+ ...|+.|++++|.+.+ ..+..+..+++|+.+++++|.++.
T Consensus 88 ~n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~ 164 (305)
T d1xkua_ 88 KNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 164 (305)
T ss_dssp SSCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCccC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc
Confidence 99998 566543 2345555555544432 233445667778888888877653
Q ss_pred ccCCccc-c--------ccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhhhhhHHhhhhhhcccccCCCCCC
Q 005734 182 EVAGIRS-V--------NRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQNLINVARRKLLEQSSNLAAEPAT 252 (680)
Q Consensus 182 ~~p~~~~-~--------~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~~~~l~~~~l~~~~n~l~~~~~~ 252 (680)
+|.... . +.........+..+..+..++++.|.+++..+..+. .+.++. .+.+++|++...+..
T Consensus 165 -l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~----~l~~L~--~L~L~~N~L~~lp~~ 237 (305)
T d1xkua_ 165 -IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA----NTPHLR--ELHLNNNKLVKVPGG 237 (305)
T ss_dssp -CCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG----GSTTCC--EEECCSSCCSSCCTT
T ss_pred -cCcccCCccCEEECCCCcCCCCChhHhhcccccccccccccccccccccccc----ccccce--eeecccccccccccc
Confidence 222100 0 000001113445556666777777777776665544 122222 334556666554332
Q ss_pred CCC-CCccccccCCCCCC
Q 005734 253 VGS-SSDQVIALPTSRSS 269 (680)
Q Consensus 253 ~~~-~~~~~~~~~~~~~~ 269 (680)
... ..++..+++.|+.+
T Consensus 238 l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 238 LADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp TTTCSSCCEEECCSSCCC
T ss_pred cccccCCCEEECCCCccC
Confidence 221 23455555555443
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=4.9e-12 Score=125.87 Aligned_cols=139 Identities=21% Similarity=0.178 Sum_probs=116.9
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+|+.|+|++|.|+. +| .++.+++|++|+|++|++++ +|..+..+++|+.|++++|.+.+..+..+..+.+|+.|+
T Consensus 54 l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~ 130 (266)
T d1p9ag_ 54 YTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (266)
T ss_dssp CTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred cccccccccccccccc-cc-cccccccccccccccccccc-cccccccccccccccccccccceeecccccccccccccc
Confidence 4689999999999984 44 36789999999999999984 577899999999999999999977778888999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
+++|.++...+..+..+++|+.|++++|++++..+. .|..+..++.|+++.|+|+ .+|..+.
T Consensus 131 l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~-------------~~~~l~~L~~L~Ls~N~L~-~lp~~~~ 192 (266)
T d1p9ag_ 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAG-------------LLNGLENLDTLLLQENSLY-TIPKGFF 192 (266)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTT-------------TTTTCTTCCEEECCSSCCC-CCCTTTT
T ss_pred ccccccceeccccccccccchhcccccccccccCcc-------------ccccccccceeecccCCCc-ccChhHC
Confidence 999999976666778899999999999999875554 3556677888999999998 5665544
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=5.2e-12 Score=126.91 Aligned_cols=141 Identities=16% Similarity=0.097 Sum_probs=82.1
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEcc-CccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQ-KNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~-~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.++.|++++|.+....+..+..+..+..+... .|.++...|..|.++++|++|+|++|.+....+..+..+.+|+.+++
T Consensus 57 ~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l 136 (284)
T d1ozna_ 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYL 136 (284)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhh
Confidence 56666666666665555555666666666543 44455444555666666666666666666544555556666666666
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLV 225 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~ 225 (680)
++|++++..+..|..+++|+.|++++|.+++..+. .|..+..+..++++.|++++..|..|.
T Consensus 137 ~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~-------------~f~~l~~L~~l~l~~N~l~~i~~~~f~ 198 (284)
T d1ozna_ 137 QDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER-------------AFRGLHSLDRLLLHQNRVAHVHPHAFR 198 (284)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT-------------TTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ccccccccChhHhccccchhhcccccCcccccchh-------------hhccccccchhhhhhccccccChhHhh
Confidence 66666644445566666666666666666543332 234445555566666666665555444
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.28 E-value=3.7e-12 Score=111.02 Aligned_cols=105 Identities=23% Similarity=0.260 Sum_probs=88.3
Q ss_pred CEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCc
Q 005734 98 RFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 98 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N 177 (680)
+.|+|++|+|+ .+| .+..+++|++|+|++|+++ .+|+.++.+++|+.|++++|.++. +| .++++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 58999999998 555 4899999999999999999 788899999999999999999994 66 4999999999999999
Q ss_pred ccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 178 LTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 178 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
.++.. |.. ..+..+..+..+++++|+++..
T Consensus 76 ~i~~~-~~~-----------~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 76 RLQQS-AAI-----------QPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp CCCSS-STT-----------GGGGGCTTCCEEECTTSGGGGS
T ss_pred ccCCC-CCc-----------hhhcCCCCCCEEECCCCcCCcC
Confidence 98743 220 1345566778899999988643
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=1.3e-11 Score=112.80 Aligned_cols=105 Identities=19% Similarity=0.197 Sum_probs=71.0
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
+++.|+|++|.++. ++..+..+++|+.|+|++|.|+ .++ .+..+++|++|+|++|+++...+..+..+++|+.|+++
T Consensus 19 ~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 19 RDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp SCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred cCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccccceec
Confidence 56777777777764 3544566777777777777777 343 46777777777777777774434444567777777777
Q ss_pred CCcccccCC--hhhcCCCCCCeeeccCcccc
Q 005734 152 NNKFEGSIP--LELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 152 ~N~l~g~~P--~~l~~l~~L~~L~l~~N~~~ 180 (680)
+|+++. ++ ..+..+++|++|++++|.++
T Consensus 96 ~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 96 NNSLVE-LGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp SCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred cccccc-cccccccccccccchhhcCCCccc
Confidence 777763 33 34667777777777777664
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=4.1e-11 Score=108.76 Aligned_cols=109 Identities=24% Similarity=0.260 Sum_probs=87.8
Q ss_pred CCccceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCc-cCcccCCcccCCCCCCCEEEccCCcCCccCccc
Q 005734 60 PCLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKN-HFSGVIPKELGELTKLELLDLSNNKLSGIIPVE 138 (680)
Q Consensus 60 ~c~w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 138 (680)
|+.++++.|. ++++. ..|..+..+++|+.|++++| .|+..-+..|.++++|+.|+|++|+|+..-|..
T Consensus 7 c~~~~~l~c~----------~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~ 75 (156)
T d2ifga3 7 PHGSSGLRCT----------RDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (156)
T ss_dssp CSSSSCEECC----------SSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred cCCCCeEEec----------CCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccc
Confidence 3346666664 44444 45677888999999999766 588666778999999999999999999777888
Q ss_pred cCCCCCCcEEEccCCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 139 ISRLPSLKRLLLGNNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 139 ~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
|..+++|++|+|++|+++ .+|.......+|+.|+|++|.+.
T Consensus 76 f~~l~~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 76 FHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp GGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred ccccccccceeccCCCCc-ccChhhhccccccccccCCCccc
Confidence 999999999999999999 56665555557999999999774
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=2.7e-11 Score=110.73 Aligned_cols=116 Identities=17% Similarity=0.080 Sum_probs=94.7
Q ss_pred cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCC
Q 005734 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTL 168 (680)
Q Consensus 89 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~ 168 (680)
+.+.++.+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ .++ .+..+++|++|++++|+++...+..+..+++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccc
Confidence 34678889999999999998 56877788999999999999999 564 5899999999999999999655555678999
Q ss_pred CCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 169 LSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 169 L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
|++|++++|.++.. +.. ..+..+..+..+++++|+++..
T Consensus 89 L~~L~L~~N~i~~~-~~l-----------~~l~~l~~L~~L~l~~N~i~~~ 127 (162)
T d1a9na_ 89 LTELILTNNSLVEL-GDL-----------DPLASLKSLTYLCILRNPVTNK 127 (162)
T ss_dssp CCEEECCSCCCCCG-GGG-----------GGGGGCTTCCEEECCSSGGGGS
T ss_pred cccceecccccccc-ccc-----------cccccccccchhhcCCCccccc
Confidence 99999999988642 211 2355667788899999987643
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.14 E-value=1.2e-10 Score=110.14 Aligned_cols=102 Identities=25% Similarity=0.346 Sum_probs=69.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|+++++++.. + +.+..+++|++|++++|+|++. ++ ++++++|++|++++|.+. .+| .+..+++|+.|++
T Consensus 40 ~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 40 DQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTL 113 (199)
T ss_dssp TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred cCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCc-cc-ccCCcccccccccccccc-ccc-ccccccccccccc
Confidence 356777777777763 2 2466777777777777777753 32 777777777777777776 444 3677777777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
++|.+.. + ..+..+++|+.|++++|.+.
T Consensus 114 ~~~~~~~-~-~~~~~l~~L~~L~l~~n~l~ 141 (199)
T d2omxa2 114 FNNQITD-I-DPLKNLTNLNRLELSSNTIS 141 (199)
T ss_dssp CSSCCCC-C-GGGTTCTTCSEEECCSSCCC
T ss_pred ccccccc-c-cccchhhhhHHhhhhhhhhc
Confidence 7777664 2 23667777777777777664
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.13 E-value=1.5e-10 Score=117.10 Aligned_cols=136 Identities=20% Similarity=0.212 Sum_probs=93.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
..++.+++++|.+. .+|.. .+++|+.|++++|.+.+..+..+.+++.++.|++++|.+++..|..+.++++|++|+|
T Consensus 150 ~~L~~l~l~~n~l~-~l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L 226 (305)
T d1xkua_ 150 KKLSYIRIADTNIT-TIPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 226 (305)
T ss_dssp TTCCEEECCSSCCC-SCCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEEC
T ss_pred cccCccccccCCcc-ccCcc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeec
Confidence 46777888877776 34443 3567888888888888777777888888888888888888776777777888888888
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLP 217 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~ 217 (680)
++|.++ .+|..+.++++|++|+|++|+++. ++... +.. ...+.....+..+++++|.+.
T Consensus 227 ~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~-i~~~~-----f~~-~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 227 NNNKLV-KVPGGLADHKYIQVVYLHNNNISA-IGSND-----FCP-PGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CSSCCS-SCCTTTTTCSSCCEEECCSSCCCC-CCTTS-----SSC-SSCCTTSCCCSEEECCSSSSC
T ss_pred cccccc-ccccccccccCCCEEECCCCccCc-cChhh-----ccC-cchhcccCCCCEEECCCCcCc
Confidence 888887 577778888888888888887763 33210 000 012233445566777777764
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.11 E-value=2.6e-10 Score=107.86 Aligned_cols=127 Identities=24% Similarity=0.323 Sum_probs=107.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
-.++++|++++|.+++..| ++.+++|++|++++|.+.. +| .+.++++|+.|++++|.+.. + ..+..+++|+.|+
T Consensus 61 l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~-~-~~~~~l~~L~~L~ 134 (199)
T d2omxa2 61 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITD-I-DPLKNLTNLNRLE 134 (199)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred CCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-cccccccccccccccccccc-c-cccchhhhhHHhh
Confidence 4689999999999986533 8999999999999999974 44 48999999999999999984 3 3488999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGS 219 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~ 219 (680)
+++|++.. +| .+..+++|+.|++.+|.+++. + .+..+.+++.+++++|+++..
T Consensus 135 l~~n~l~~-~~-~l~~~~~L~~L~l~~n~l~~l-~--------------~l~~l~~L~~L~ls~N~i~~i 187 (199)
T d2omxa2 135 LSSNTISD-IS-ALSGLTSLQQLNFSSNQVTDL-K--------------PLANLTTLERLDISSNKVSDI 187 (199)
T ss_dssp CCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC-G--------------GGTTCTTCCEEECCSSCCCCC
T ss_pred hhhhhhcc-cc-cccccccccccccccccccCC-c--------------cccCCCCCCEEECCCCCCCCC
Confidence 99999983 54 588999999999999988752 2 245667788999999999864
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.10 E-value=2.2e-10 Score=109.31 Aligned_cols=102 Identities=22% Similarity=0.313 Sum_probs=68.2
Q ss_pred cEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcc
Q 005734 72 KVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLG 151 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 151 (680)
.++.|+++++.+... + .+..+++|++|+|++|+|++ ++ .++.+++|+.|++++|+++ .+| .+..+++|+.|+++
T Consensus 47 ~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 47 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEECT
T ss_pred CccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc-ccc-cccccccccccccc
Confidence 566777777776643 2 36667777777777777775 33 3567777777777777776 344 46777777777777
Q ss_pred CCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 152 NNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 152 ~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
+|.+. .++ .+..+++|+.+++++|.++.
T Consensus 121 ~~~~~-~~~-~l~~l~~l~~l~~~~n~l~~ 148 (210)
T d1h6ta2 121 HNGIS-DIN-GLVHLPQLESLYLGNNKITD 148 (210)
T ss_dssp TSCCC-CCG-GGGGCTTCCEEECCSSCCCC
T ss_pred ccccc-ccc-cccccccccccccccccccc
Confidence 77765 233 46677777777777776653
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.08 E-value=2.2e-10 Score=109.36 Aligned_cols=126 Identities=29% Similarity=0.364 Sum_probs=106.2
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
..+++.|+|++|.+++. + .++.+++|++|++++|+|++ +| .+..+++|+.|++++|.+. .++ .+..+++|+.++
T Consensus 67 l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~-~~~-~l~~l~~l~~l~ 140 (210)
T d1h6ta2 67 LPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLY 140 (210)
T ss_dssp CTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCC-CCG-GGGGCTTCCEEE
T ss_pred CCCCCEEeCCCccccCc-c-ccccCccccccccccccccc-cc-ccccccccccccccccccc-ccc-cccccccccccc
Confidence 35899999999999864 3 37899999999999999985 55 5899999999999999997 444 588999999999
Q ss_pred ccCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCC
Q 005734 150 LGNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPG 218 (680)
Q Consensus 150 L~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~ 218 (680)
+++|.+++ +..+..+++|+.+++++|.+++ ++. +..+.+++.+++++|+++.
T Consensus 141 ~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~~--------------l~~l~~L~~L~Ls~N~i~~ 192 (210)
T d1h6ta2 141 LGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IVP--------------LAGLTKLQNLYLSKNHISD 192 (210)
T ss_dssp CCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CGG--------------GTTCTTCCEEECCSSCCCB
T ss_pred cccccccc--cccccccccccccccccccccc-ccc--------------ccCCCCCCEEECCCCCCCC
Confidence 99999985 3467889999999999999875 222 4556778889999999975
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=3.6e-10 Score=102.34 Aligned_cols=85 Identities=26% Similarity=0.294 Sum_probs=75.1
Q ss_pred CcEeEEEcCCCC-CcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 71 GKVQMLDMKERS-LEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 71 ~~l~~L~l~~~~-l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
.+++.|++.+|+ ++..-+..|.++++|+.|+|++|+|+...|..|..+++|++|+|++|+|+ .+|.......+|+.|+
T Consensus 31 ~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L~ 109 (156)
T d2ifga3 31 ENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELV 109 (156)
T ss_dssp SCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEEE
T ss_pred cccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhccccccccc
Confidence 578999998764 88666678999999999999999999888889999999999999999999 6776666666899999
Q ss_pred ccCCccc
Q 005734 150 LGNNKFE 156 (680)
Q Consensus 150 L~~N~l~ 156 (680)
|++|.+.
T Consensus 110 L~~Np~~ 116 (156)
T d2ifga3 110 LSGNPLH 116 (156)
T ss_dssp CCSSCCC
T ss_pred cCCCccc
Confidence 9999986
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=98.86 E-value=3.9e-09 Score=109.67 Aligned_cols=103 Identities=29% Similarity=0.367 Sum_probs=77.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++++|.++. + +.+..+++|+.|++++|.+++.. .+..+++|+.|++++|++++. + .+..++.++.+++
T Consensus 219 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~-~-~~~~~~~l~~l~~ 292 (384)
T d2omza2 219 TNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNI-S-PLAGLTALTNLEL 292 (384)
T ss_dssp TTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCSEEEC
T ss_pred CCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCC-C-ccccccccccccc
Confidence 578899999998875 2 46788899999999999998643 378889999999999998853 3 2566777777777
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
+.|.+++ + ..+..+++++.|++++|.+++
T Consensus 293 ~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~ 321 (384)
T d2omza2 293 NENQLED-I-SPISNLKNLTYLTLYFNNISD 321 (384)
T ss_dssp CSSCCSC-C-GGGGGCTTCSEEECCSSCCSC
T ss_pred ccccccc-c-cccchhcccCeEECCCCCCCC
Confidence 7777764 2 246666777777777776665
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.85 E-value=6.6e-09 Score=100.01 Aligned_cols=127 Identities=19% Similarity=0.246 Sum_probs=69.2
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
++|+.|++++|.+++..| +..+++|+++++++|.++ .++ .+..+++|+.+++++|...+.. .+...+.++.+.+
T Consensus 63 ~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l~~~~~~~~~--~~~~~~~~~~l~~ 136 (227)
T d1h6ua2 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYL 136 (227)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEEC
T ss_pred CCCcEeecCCceeecccc--cccccccccccccccccc-ccc-cccccccccccccccccccccc--hhccccchhhhhc
Confidence 456666666666554322 555666666666666554 232 3555666666666666555321 1333444444444
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSS 220 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~ 220 (680)
+++.+... ..+..+++|+.|++++|.++... .+..+..++.+++++|++++..
T Consensus 137 ~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~---------------~l~~l~~L~~L~Ls~n~l~~l~ 189 (227)
T d1h6ua2 137 DLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT---------------PLANLSKLTTLKADDNKISDIS 189 (227)
T ss_dssp CSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG---------------GGTTCTTCCEEECCSSCCCCCG
T ss_pred hhhhhchh--hhhccccccccccccccccccch---------------hhcccccceecccCCCccCCCh
Confidence 44444422 23566677777777777665321 2334455666777777776643
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=98.84 E-value=8.2e-09 Score=107.17 Aligned_cols=103 Identities=30% Similarity=0.450 Sum_probs=87.4
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.++..+++++|.+++..| +...++|+.|++++|.++. + +.+..+++|+.|++++|.+++..| +..+++|+.|++
T Consensus 197 ~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l 270 (384)
T d2omza2 197 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 270 (384)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred cccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEeec
Confidence 578899999999987654 4667899999999999985 3 468899999999999999996433 788999999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCccccc
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
++|.+++. + .+..++.++.+.+.+|.+++
T Consensus 271 ~~~~l~~~-~-~~~~~~~l~~l~~~~n~l~~ 299 (384)
T d2omza2 271 GANQISNI-S-PLAGLTALTNLELNENQLED 299 (384)
T ss_dssp CSSCCCCC-G-GGTTCTTCSEEECCSSCCSC
T ss_pred cCcccCCC-C-cccccccccccccccccccc
Confidence 99999864 3 37888999999999998876
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=98.82 E-value=1.4e-08 Score=97.75 Aligned_cols=168 Identities=20% Similarity=0.204 Sum_probs=113.1
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.+++.|++.+++++. + +.+..+++|++|++++|.+++..| +..+++|+++++++|.++ .++ .+..+++|+.+++
T Consensus 41 ~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 41 DGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEEC
T ss_pred CCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-ccccccccccccc
Confidence 468888888888874 4 357888899999999998886433 788888999999988887 455 4778888999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCCCCCcccCCCCCCCCCCcchhhhhhhhh
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGEDSLHTNGDHSCANLPGSSETHLVQHSQN 230 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~s~n~l~~~~~~~~~~~~~~ 230 (680)
++|...+. ..+...+.+..+.++++.+....+ +.....++.+++++|.++...+ +. .
T Consensus 115 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~---------------~~~~~~L~~L~l~~n~~~~~~~--l~----~ 171 (227)
T d1h6ua2 115 TSTQITDV--TPLAGLSNLQVLYLDLNQITNISP---------------LAGLTNLQYLSIGNAQVSDLTP--LA----N 171 (227)
T ss_dssp TTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG---------------GGGCTTCCEEECCSSCCCCCGG--GT----T
T ss_pred cccccccc--chhccccchhhhhchhhhhchhhh---------------hccccccccccccccccccchh--hc----c
Confidence 88887753 235667788888888776654322 3344566778888888876443 22 2
Q ss_pred hhhHHhhhhhhcccccCCCCCCCCCCCccccccCCCCCC
Q 005734 231 LINVARRKLLEQSSNLAAEPATVGSSSDQVIALPTSRSS 269 (680)
Q Consensus 231 ~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (680)
+.+++ .+.+++|++...++......+...+++.+..+
T Consensus 172 l~~L~--~L~Ls~n~l~~l~~l~~l~~L~~L~Ls~N~lt 208 (227)
T d1h6ua2 172 LSKLT--TLKADDNKISDISPLASLPNLIEVHLKNNQIS 208 (227)
T ss_dssp CTTCC--EEECCSSCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred cccce--ecccCCCccCCChhhcCCCCCCEEECcCCcCC
Confidence 22222 34456677765433222223455566666544
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=1e-08 Score=99.54 Aligned_cols=107 Identities=17% Similarity=0.210 Sum_probs=56.4
Q ss_pred CccceeeeCCCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCc-ccc
Q 005734 61 CLWSGVRCLNGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIP-VEI 139 (680)
Q Consensus 61 c~w~gv~c~~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~ 139 (680)
|.++.|.|.. .+++ .+|+.+. +.+++|+|++|+|+...+..|.++++|++|+|++|.+...+| ..|
T Consensus 8 C~~~~i~c~~----------~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f 74 (242)
T d1xwdc1 8 CSNRVFLCQE----------SKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF 74 (242)
T ss_dssp ECSSEEEEES----------CSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSE
T ss_pred CcCCEEEEeC----------CCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccc
Confidence 5666666642 3333 3443332 345666666666654333445556666666666665554333 234
Q ss_pred CCCCCCcEEEcc-CCcccccCChhhcCCCCCCeeeccCcccc
Q 005734 140 SRLPSLKRLLLG-NNKFEGSIPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 140 ~~l~~L~~L~L~-~N~l~g~~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
..+++++.+.+. .|++....+..|.++++|++|++.+|.+.
T Consensus 75 ~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 75 SNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK 116 (242)
T ss_dssp ESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCC
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhc
Confidence 555555555543 34555444555556666666666665554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.76 E-value=7.3e-11 Score=111.60 Aligned_cols=87 Identities=20% Similarity=0.297 Sum_probs=44.2
Q ss_pred cccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEccCCcccccCChhhcCCCC
Q 005734 89 PDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLLGNNKFEGSIPLELSRFTL 168 (680)
Q Consensus 89 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~l~~l~~ 168 (680)
.++..|++|++|+|++|+|+ .++ .+..+++|+.|+|++|+++ .+|.....+++|+.|++++|+++. ++ .+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHH
T ss_pred hHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-ccccccc
Confidence 34555555555555555555 233 3555555555555555554 344433344455555555555552 22 2445555
Q ss_pred CCeeeccCcccc
Q 005734 169 LSELQFDDYLTS 180 (680)
Q Consensus 169 L~~L~l~~N~~~ 180 (680)
|++|++++|.++
T Consensus 117 L~~L~L~~N~i~ 128 (198)
T d1m9la_ 117 LRVLYMSNNKIT 128 (198)
T ss_dssp SSEEEESEEECC
T ss_pred ccccccccchhc
Confidence 555555555543
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.72 E-value=7.6e-11 Score=111.46 Aligned_cols=110 Identities=22% Similarity=0.280 Sum_probs=93.0
Q ss_pred CCcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEE
Q 005734 70 NGKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLL 149 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 149 (680)
-.+++.|+|++|.++. ++ .+..+++|+.|+|++|.|+ .+|..+..+++|+.|++++|+++. ++ .+..+++|+.|+
T Consensus 47 L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~ 121 (198)
T d1m9la_ 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHHSSEEE
T ss_pred ccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-cccccccccccc
Confidence 4689999999999984 44 5889999999999999998 577666667789999999999984 44 488899999999
Q ss_pred ccCCcccccCC--hhhcCCCCCCeeeccCcccccccCC
Q 005734 150 LGNNKFEGSIP--LELSRFTLLSELQFDDYLTSAEVAG 185 (680)
Q Consensus 150 L~~N~l~g~~P--~~l~~l~~L~~L~l~~N~~~g~~p~ 185 (680)
+++|+++. ++ ..+..+++|+.|++++|.+....+.
T Consensus 122 L~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 158 (198)
T d1m9la_ 122 MSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECCC-HHHHHHHTTTTTCSEEEECSSHHHHHHCT
T ss_pred cccchhcc-ccccccccCCCccceeecCCCccccCccc
Confidence 99999984 44 4689999999999999988765444
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=4.5e-08 Score=94.78 Aligned_cols=139 Identities=15% Similarity=0.081 Sum_probs=99.8
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCC-cccCCCCCCCEEEcc-CCcCCccCccccCCCCCCcEE
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIP-KELGELTKLELLDLS-NNKLSGIIPVEISRLPSLKRL 148 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls-~N~l~g~~p~~~~~l~~L~~L 148 (680)
..+++|+|++|.++...+..|.++++|++|++++|.+...+| ..|..+++++.|++. .|++....+..+..+++|+.|
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 468999999999986555678999999999999999987554 568899999999976 478887788889999999999
Q ss_pred EccCCcccccCC-hhhcCCCCCCeeeccCcccccccCCccccccccCCcccccCCC-CCCcccCCCCCCCCCCcch
Q 005734 149 LLGNNKFEGSIP-LELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIGED-SLHTNGDHSCANLPGSSET 222 (680)
Q Consensus 149 ~L~~N~l~g~~P-~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~l~~s~n~l~~~~~~ 222 (680)
++++|.+....+ ..+..++.|..+..+++.+.. ++.. .+..+ ..+..++++.|+++...+.
T Consensus 109 ~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~-i~~~------------~~~~~~~~l~~L~l~~n~l~~i~~~ 171 (242)
T d1xwdc1 109 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT-IERN------------SFVGLSFESVILWLNKNGIQEIHNC 171 (242)
T ss_dssp EEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCE-ECTT------------SSTTSBSSCEEEECCSSCCCEECTT
T ss_pred ccchhhhccccccccccccccccccccccccccc-cccc------------ccccccccceeeecccccccccccc
Confidence 999999974322 223444555555555555432 2210 11111 2345577888888754443
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.55 E-value=1.5e-07 Score=95.81 Aligned_cols=100 Identities=23% Similarity=0.278 Sum_probs=82.3
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
.++++|+|++++++ .+|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.- .++|++|++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 46889999999998 57753 578999999999999 788654 57899999999998 55532 246999999
Q ss_pred cCCcccccCChhhcCCCCCCeeeccCcccccccC
Q 005734 151 GNNKFEGSIPLELSRFTLLSELQFDDYLTSAEVA 184 (680)
Q Consensus 151 ~~N~l~g~~P~~l~~l~~L~~L~l~~N~~~g~~p 184 (680)
++|.+. .+|. ++.+++|++|++++|.+.....
T Consensus 106 ~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~ 137 (353)
T d1jl5a_ 106 SNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPD 137 (353)
T ss_dssp CSSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCC
T ss_pred cccccc-cccc-hhhhccceeecccccccccccc
Confidence 999998 5775 6889999999999998876544
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.06 E-value=1.8e-05 Score=79.81 Aligned_cols=77 Identities=25% Similarity=0.303 Sum_probs=63.5
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccCCcCCccCccccCCCCCCcEEEc
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSNNKLSGIIPVEISRLPSLKRLLL 150 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 150 (680)
++++.|+|++|+|+ .+|.. +.+|+.|++++|.++ .++.. .++|++|+|++|.++ .+|. ++.+++|+.|++
T Consensus 58 ~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l 127 (353)
T d1jl5a_ 58 PHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDV 127 (353)
T ss_dssp TTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhhh---ccccccccccccccc-cccc-hhhhccceeecc
Confidence 47899999999998 67765 457999999999998 44432 246999999999998 6775 688999999999
Q ss_pred cCCcccc
Q 005734 151 GNNKFEG 157 (680)
Q Consensus 151 ~~N~l~g 157 (680)
++|.+..
T Consensus 128 ~~~~~~~ 134 (353)
T d1jl5a_ 128 DNNSLKK 134 (353)
T ss_dssp CSSCCSC
T ss_pred ccccccc
Confidence 9998874
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.01 E-value=7.2e-07 Score=88.49 Aligned_cols=107 Identities=23% Similarity=0.302 Sum_probs=73.8
Q ss_pred CcEeEEEcCCCCCccc-CCcccCCCCCCCEEEccCccCcccCCcccCCCCCCCEEEccC-CcCCcc-CccccCCCCCCcE
Q 005734 71 GKVQMLDMKERSLEGT-LAPDLGKLSDLRFLVLQKNHFSGVIPKELGELTKLELLDLSN-NKLSGI-IPVEISRLPSLKR 147 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~-~p~~~~~l~~L~~ 147 (680)
.+++.|||+++.++.. +..-+..+++|++|+|+++.+++..+..++.+++|+.|+|++ +.++.. +..-...+++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4688889988877644 344467788899999999888877778888888999999988 456521 2233456788888
Q ss_pred EEccCC-cccc-cCChhhcC-CCCCCeeeccCc
Q 005734 148 LLLGNN-KFEG-SIPLELSR-FTLLSELQFDDY 177 (680)
Q Consensus 148 L~L~~N-~l~g-~~P~~l~~-l~~L~~L~l~~N 177 (680)
|+++++ .++. .++..+.. .++|+.|++++.
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~ 158 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 158 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred cccccccccccccchhhhcccccccchhhhccc
Confidence 888874 4432 12223333 357888877653
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.00 E-value=1.3e-05 Score=77.82 Aligned_cols=131 Identities=13% Similarity=0.135 Sum_probs=85.2
Q ss_pred CCCeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC-CCcccceeeEEecCCCCceEEEEEecCCCCh
Q 005734 395 SGCTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN-HKNFVNLIGYCEDDEPFNRMMVFEYAPNGTV 473 (680)
Q Consensus 395 ~~g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ey~~~GsL 473 (680)
+...||+.... +..+.||+....... ....+.+|...+..+. +--+.++++++.+++ ..++||+++++.++
T Consensus 26 s~~~v~rv~~~-~~~~vlk~~~~~~~~-----~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~--~~~lv~~~l~G~~~ 97 (263)
T d1j7la_ 26 SPAKVYKLVGE-NENLYLKMTDSRYKG-----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMSEADGVLC 97 (263)
T ss_dssp SSSEEEEEECS-SCEEEEEEECGGGTT-----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEECCSSEEH
T ss_pred CCCcEEEEEeC-CCeEEEEEcCCCccc-----chhhHHHHHHHHHHHhccCCCCcEEEEEecCC--ceEEEEEecccccc
Confidence 34689998754 445677766433211 1224567888877664 333567778777666 67999999999887
Q ss_pred hhhhccCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------
Q 005734 474 FEHLHIKEMDHLDWNARMRIIMGTAYCLQYMHHEL--------------------------------------------- 508 (680)
Q Consensus 474 ~~~l~~~~~~~l~~~~rl~ia~~ia~gL~yLH~~~--------------------------------------------- 508 (680)
.+..... ....+++.++++.++.||+..
T Consensus 98 ~~~~~~~-------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (263)
T d1j7la_ 98 SEEYEDE-------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp HHHTTTC-------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHH
T ss_pred ccccccc-------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHH
Confidence 6554211 112334555555666665311
Q ss_pred -----------CCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 509 -----------NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 509 -----------~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+.++|+|+.|.||+++++...-|.||+.+..
T Consensus 171 ~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 12378999999999999877778999987754
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.99 E-value=3.4e-07 Score=96.57 Aligned_cols=110 Identities=23% Similarity=0.289 Sum_probs=85.1
Q ss_pred cEeEEEcCCCCCccc-CCcccCCCCCCCEEEccCccCcc----cCCcccCCCCCCCEEEccCCcCCcc----CccccC-C
Q 005734 72 KVQMLDMKERSLEGT-LAPDLGKLSDLRFLVLQKNHFSG----VIPKELGELTKLELLDLSNNKLSGI----IPVEIS-R 141 (680)
Q Consensus 72 ~l~~L~l~~~~l~g~-~p~~~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~-~ 141 (680)
+|+.||++.|++++. +..-+..+++++.|+|++|.|+. .+...+..+++|+.|||++|.++.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 689999999999863 22335567899999999999873 3455678899999999999998631 222222 2
Q ss_pred CCCCcEEEccCCccccc----CChhhcCCCCCCeeeccCccccc
Q 005734 142 LPSLKRLLLGNNKFEGS----IPLELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 142 l~~L~~L~L~~N~l~g~----~P~~l~~l~~L~~L~l~~N~~~g 181 (680)
..+|+.|+|++|+++.. ++..+..+++|++|++++|.++.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 35799999999999753 55678889999999999998764
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.95 E-value=1.8e-06 Score=85.58 Aligned_cols=131 Identities=21% Similarity=0.219 Sum_probs=87.7
Q ss_pred CcEeEEEcCCCCCcccCCcccCCCCCCCEEEccC-ccCccc-CCcccCCCCCCCEEEccCC-cCCcc-------------
Q 005734 71 GKVQMLDMKERSLEGTLAPDLGKLSDLRFLVLQK-NHFSGV-IPKELGELTKLELLDLSNN-KLSGI------------- 134 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~------------- 134 (680)
.+++.|+|+++.+++..+..++.+++|++|++++ +.++.. +..-...+++|++|+|+++ .++..
T Consensus 71 ~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L 150 (284)
T d2astb2 71 SKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI 150 (284)
T ss_dssp CCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC
T ss_pred CCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhccccccc
Confidence 5788888888888777677777888888888877 455421 2222345677777777763 33210
Q ss_pred ----------------CccccCCCCCCcEEEccCC-cccccCChhhcCCCCCCeeeccCc-ccccccCCccccccccCCc
Q 005734 135 ----------------IPVEISRLPSLKRLLLGNN-KFEGSIPLELSRFTLLSELQFDDY-LTSAEVAGIRSVNRKFGQY 196 (680)
Q Consensus 135 ----------------~p~~~~~l~~L~~L~L~~N-~l~g~~P~~l~~l~~L~~L~l~~N-~~~g~~p~~~~~~~~~~~~ 196 (680)
+.....++++|++|++++| .+++.....++++++|++|+++++ .++.....
T Consensus 151 ~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~----------- 219 (284)
T d2astb2 151 TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLL----------- 219 (284)
T ss_dssp CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGG-----------
T ss_pred chhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHH-----------
Confidence 1111235789999999986 578778888999999999999984 55543221
Q ss_pred ccccCCCCCCcccCCCCC
Q 005734 197 GFKIGEDSLHTNGDHSCA 214 (680)
Q Consensus 197 ~~~~~~~~~~~~l~~s~n 214 (680)
.+..+..++.++++++
T Consensus 220 --~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 220 --ELGEIPTLKTLQVFGI 235 (284)
T ss_dssp --GGGGCTTCCEEECTTS
T ss_pred --HHhcCCCCCEEeeeCC
Confidence 3344556677777665
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.88 E-value=1.4e-06 Score=78.62 Aligned_cols=65 Identities=28% Similarity=0.315 Sum_probs=31.5
Q ss_pred CCCCCCCEEEccCCcCCcc--CccccCCCCCCcEEEccCCcccccCCh-hhcCCCCCCeeeccCccccc
Q 005734 116 GELTKLELLDLSNNKLSGI--IPVEISRLPSLKRLLLGNNKFEGSIPL-ELSRFTLLSELQFDDYLTSA 181 (680)
Q Consensus 116 ~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~L~~N~l~g~~P~-~l~~l~~L~~L~l~~N~~~g 181 (680)
..+++|++|+|++|+++.. ++..+..+++|+.|+|++|.++. ++. ......+|+.|++++|.++.
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~-l~~l~~l~~~~L~~L~L~~Npl~~ 129 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ERELDKIKGLKLEELWLDGNSLSD 129 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC-GGGHHHHTTCCCSSCCCTTSTTSS
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc-chhhhhhhccccceeecCCCCcCc
Confidence 3455555555555555521 12234445555555555555552 222 22233345555555555544
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.87 E-value=2e-05 Score=76.02 Aligned_cols=141 Identities=7% Similarity=0.049 Sum_probs=82.7
Q ss_pred ccCCCCC-CeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCC--CCcccceeeEEecCCCCceEEEEE
Q 005734 390 IIDTQSG-CTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRIN--HKNFVNLIGYCEDDEPFNRMMVFE 466 (680)
Q Consensus 390 ~iG~G~~-g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lV~e 466 (680)
.+..|.. +.||+...++|..+.||...... ...+..|...++.+. .-.+.++++++.+++ ..++|||
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~--------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~--~~~~v~~ 86 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLG 86 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEE
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC--------HhHHHHHHHHHHHHHhcCCCCCceeeeccccc--ceEEEEE
Confidence 3444543 68999998888888888754332 123566777776663 333566788777665 6799999
Q ss_pred ecCCCChhhhh-----------------ccCC--CCC--CCHHHHHHHHH--------------------HHHHHHHHHh
Q 005734 467 YAPNGTVFEHL-----------------HIKE--MDH--LDWNARMRIIM--------------------GTAYCLQYMH 505 (680)
Q Consensus 467 y~~~GsL~~~l-----------------~~~~--~~~--l~~~~rl~ia~--------------------~ia~gL~yLH 505 (680)
|+++.++.+.. |... ... -.+...+.-.. .....+..+.
T Consensus 87 ~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (255)
T d1nd4a_ 87 EVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 166 (255)
T ss_dssp CCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred eeeccccccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHH
Confidence 99886654321 1000 000 01111111000 0111222232
Q ss_pred cC----CCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 506 HE----LNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 506 ~~----~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.. ..+.++|+|+.|.||+++++..+.|.||+.+..
T Consensus 167 ~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 167 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence 21 123479999999999999887788999987654
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.85 E-value=4e-07 Score=82.22 Aligned_cols=81 Identities=22% Similarity=0.300 Sum_probs=54.5
Q ss_pred CCCCCCCEEEccCccCccc--CCcccCCCCCCCEEEccCCcCCccCcc-ccCCCCCCcEEEccCCcccccCChh------
Q 005734 92 GKLSDLRFLVLQKNHFSGV--IPKELGELTKLELLDLSNNKLSGIIPV-EISRLPSLKRLLLGNNKFEGSIPLE------ 162 (680)
Q Consensus 92 ~~l~~L~~L~L~~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~P~~------ 162 (680)
..++.|++|+|++|+|+.. ++..+..+++|+.|+|++|.++. +++ ......+|+.|++++|.+.......
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~-l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~ 140 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISA 140 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC-GGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCcccc-chhhhhhhccccceeecCCCCcCcCcccchhHHHH
Confidence 4577788888888888743 23445667888888888888873 433 3334456788888888887654422
Q ss_pred -hcCCCCCCeee
Q 005734 163 -LSRFTLLSELQ 173 (680)
Q Consensus 163 -l~~l~~L~~L~ 173 (680)
+..+++|+.||
T Consensus 141 i~~~~P~L~~LD 152 (162)
T d1koha1 141 IRERFPKLLRLD 152 (162)
T ss_dssp HHTTSTTCCEET
T ss_pred HHHHCCCCCEEC
Confidence 55677777775
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.78 E-value=6.1e-07 Score=91.57 Aligned_cols=109 Identities=17% Similarity=0.132 Sum_probs=50.6
Q ss_pred CcEeEEEcCCCCCccc----CCcccCCCCCCCEEEccCccCcccCCc-------------ccCCCCCCCEEEccCCcCCc
Q 005734 71 GKVQMLDMKERSLEGT----LAPDLGKLSDLRFLVLQKNHFSGVIPK-------------ELGELTKLELLDLSNNKLSG 133 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~-------------~~~~l~~L~~L~Ls~N~l~g 133 (680)
.+++.|+|++|.++.. +...+...++|+.|++++|.+...-.. .....+.|+.|++++|+++.
T Consensus 93 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~ 172 (344)
T d2ca6a1 93 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 172 (344)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CCcccccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccc
Confidence 4566666666665532 222333455666666666655311000 01233455555555555441
Q ss_pred c----CccccCCCCCCcEEEccCCccccc-----CChhhcCCCCCCeeeccCccc
Q 005734 134 I----IPVEISRLPSLKRLLLGNNKFEGS-----IPLELSRFTLLSELQFDDYLT 179 (680)
Q Consensus 134 ~----~p~~~~~l~~L~~L~L~~N~l~g~-----~P~~l~~l~~L~~L~l~~N~~ 179 (680)
. +...+..++.|+.|+|++|.++.. +...+..+++|+.|++++|.+
T Consensus 173 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i 227 (344)
T d2ca6a1 173 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTF 227 (344)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCC
T ss_pred cccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccc
Confidence 1 122233445555555555555421 222344555555565555554
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=97.70 E-value=5.7e-06 Score=84.10 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=99.8
Q ss_pred CcEeEEEcCCCCCccc----CCcccCCCCCCCEEEccCccCccc-----CCcccCCCCCCCEEEccCCcCCcc----Ccc
Q 005734 71 GKVQMLDMKERSLEGT----LAPDLGKLSDLRFLVLQKNHFSGV-----IPKELGELTKLELLDLSNNKLSGI----IPV 137 (680)
Q Consensus 71 ~~l~~L~l~~~~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~-----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 137 (680)
..++.++++.|.++.. +...+...+.|+.|+|++|.|... +...+..+++|+.|+|++|.++.. +..
T Consensus 158 ~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~ 237 (344)
T d2ca6a1 158 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 237 (344)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred cccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccc
Confidence 5788999999988632 334456678999999999998642 344577889999999999998632 445
Q ss_pred ccCCCCCCcEEEccCCcccccCC----hhhcC--CCCCCeeeccCcccccccCCccccccccCCccccc-CCCCCCcccC
Q 005734 138 EISRLPSLKRLLLGNNKFEGSIP----LELSR--FTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKI-GEDSLHTNGD 210 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g~~P----~~l~~--l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~l~ 210 (680)
.+..+++|++|+|++|.+++.-. ..+.. ...|++|++++|.++..-... + ...+ .....++.++
T Consensus 238 ~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~------l---~~~l~~~~~~L~~L~ 308 (344)
T d2ca6a1 238 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRT------L---KTVIDEKMPDLLFLE 308 (344)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHH------H---HHHHHHHCTTCCEEE
T ss_pred cccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHH------H---HHHHHccCCCCCEEE
Confidence 67789999999999999975422 23333 357999999999876431110 0 0111 1234567789
Q ss_pred CCCCCCCCCc
Q 005734 211 HSCANLPGSS 220 (680)
Q Consensus 211 ~s~n~l~~~~ 220 (680)
+++|+++...
T Consensus 309 l~~N~~~~~~ 318 (344)
T d2ca6a1 309 LNGNRFSEED 318 (344)
T ss_dssp CTTSBSCTTS
T ss_pred CCCCcCCCcc
Confidence 9999997644
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.44 E-value=1e-05 Score=84.83 Aligned_cols=146 Identities=17% Similarity=0.076 Sum_probs=101.0
Q ss_pred CCcEeEEEcCCCCCcccCCcc----c-CCCCCCCEEEccCccCcccCCc----ccCCCCCCCEEEccCCcCCcc----Cc
Q 005734 70 NGKVQMLDMKERSLEGTLAPD----L-GKLSDLRFLVLQKNHFSGVIPK----ELGELTKLELLDLSNNKLSGI----IP 136 (680)
Q Consensus 70 ~~~l~~L~l~~~~l~g~~p~~----~-~~l~~L~~L~L~~N~l~g~~p~----~~~~l~~L~~L~Ls~N~l~g~----~p 136 (680)
...+..+++++|.++..-... + .....|+.+++++|.++..-.. .+....+|++|+|++|+++.. ++
T Consensus 282 ~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~ 361 (460)
T d1z7xw1 282 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 361 (460)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred cccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhh
Confidence 467899999999987432211 1 2346899999999998754322 334567899999999999743 34
Q ss_pred cccC-CCCCCcEEEccCCcccc----cCChhhcCCCCCCeeeccCcccccccCCccccccccCCcccccC-CCCCCcccC
Q 005734 137 VEIS-RLPSLKRLLLGNNKFEG----SIPLELSRFTLLSELQFDDYLTSAEVAGIRSVNRKFGQYGFKIG-EDSLHTNGD 210 (680)
Q Consensus 137 ~~~~-~l~~L~~L~L~~N~l~g----~~P~~l~~l~~L~~L~l~~N~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~l~ 210 (680)
..+. ..+.|++|+|++|.++. .++..+..+++|++|+|++|.++...... + ...+. ....++.++
T Consensus 362 ~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~------l---~~~l~~~~~~L~~l~ 432 (460)
T d1z7xw1 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQ------L---VESVRQPGCLLEQLV 432 (460)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHH------H---HHHHTSTTCCCCEEE
T ss_pred hhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHH------H---HHHHHhCCCccCEEE
Confidence 4443 46789999999999974 35566778899999999999987532221 0 00111 223567788
Q ss_pred CCCCCCCCCcchhh
Q 005734 211 HSCANLPGSSETHL 224 (680)
Q Consensus 211 ~s~n~l~~~~~~~~ 224 (680)
+..|+++......+
T Consensus 433 l~~~~~~~~~~~~l 446 (460)
T d1z7xw1 433 LYDIYWSEEMEDRL 446 (460)
T ss_dssp CTTCCCCHHHHHHH
T ss_pred CCCCCCCHHHHHHH
Confidence 88899887555443
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.96 E-value=0.00017 Score=64.63 Aligned_cols=106 Identities=9% Similarity=0.088 Sum_probs=51.8
Q ss_pred CcEeEEEcCCC-CCccc----CCcccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCCcc----Ccc
Q 005734 71 GKVQMLDMKER-SLEGT----LAPDLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGI----IPV 137 (680)
Q Consensus 71 ~~l~~L~l~~~-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 137 (680)
++++.|+|+++ .++.. +-..+...+.|+.|+|++|.+... +-..+...+.|+.|+|++|.++.. +-.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 35666677653 34321 223344556666666666666421 112233445666666666666532 112
Q ss_pred ccCCCCCCcEEEccCCcccc-------cCChhhcCCCCCCeeeccC
Q 005734 138 EISRLPSLKRLLLGNNKFEG-------SIPLELSRFTLLSELQFDD 176 (680)
Q Consensus 138 ~~~~l~~L~~L~L~~N~l~g-------~~P~~l~~l~~L~~L~l~~ 176 (680)
.+...++|+.|++++|.+.. .+...+..-++|+.|+++.
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISF 140 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcC
Confidence 34445556666666554331 1223333445555555543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.83 E-value=0.0011 Score=67.92 Aligned_cols=79 Identities=11% Similarity=0.031 Sum_probs=45.2
Q ss_pred cccCCCCCCeEEEEEeCC-CCEEEEEEeeeccc---hhhHHHHHHHHHHHHHHHHcCC-C--CcccceeeEEecCCCCce
Q 005734 389 NIIDTQSGCTIYKGTLSS-GVEIAVAATAITSS---KDWLKSQEMAYRKQVDTLSRIN-H--KNFVNLIGYCEDDEPFNR 461 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~-g~~vaVK~~~~~~~---~~~~~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~~~~~~ 461 (680)
+.||.|....||+....+ |+.+.||.-..... +.+ +........|.+.|+.+. + ..+.+++++.. . ..
T Consensus 32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~-~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~--~--~~ 106 (392)
T d2pula1 32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESW-PLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--E--MA 106 (392)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCC-CCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T--TT
T ss_pred EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCC-CCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcC--C--CC
Confidence 568999999999998754 57788886432110 001 001112345677776552 2 34555665543 3 34
Q ss_pred EEEEEecCCCC
Q 005734 462 MMVFEYAPNGT 472 (680)
Q Consensus 462 ~lV~ey~~~Gs 472 (680)
++||||+++..
T Consensus 107 ~lvmE~L~~~~ 117 (392)
T d2pula1 107 VTVMEDLSHLK 117 (392)
T ss_dssp EEEECCCTTSE
T ss_pred EEEEeccCCcc
Confidence 89999997644
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.31 E-value=0.00092 Score=59.62 Aligned_cols=89 Identities=18% Similarity=0.150 Sum_probs=62.5
Q ss_pred CCCCCCCEEEccCc-cCccc----CCcccCCCCCCCEEEccCCcCCcc----CccccCCCCCCcEEEccCCccccc----
Q 005734 92 GKLSDLRFLVLQKN-HFSGV----IPKELGELTKLELLDLSNNKLSGI----IPVEISRLPSLKRLLLGNNKFEGS---- 158 (680)
Q Consensus 92 ~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~---- 158 (680)
.+.++|+.|+|+++ .++.. +-..+...+.|+.|+|++|.+... +-..+...+.|+.|+|++|.++..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 34578999999874 56432 223466778899999999988632 223345568899999999988742
Q ss_pred CChhhcCCCCCCeeeccCcccc
Q 005734 159 IPLELSRFTLLSELQFDDYLTS 180 (680)
Q Consensus 159 ~P~~l~~l~~L~~L~l~~N~~~ 180 (680)
+-..+...++|+.|++++|...
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 2234667788999999888654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=96.21 E-value=0.0048 Score=61.18 Aligned_cols=157 Identities=9% Similarity=0.061 Sum_probs=81.8
Q ss_pred CCCHHHHHHHhhhhc-----cccCCCCC-CeEEEEEeCCCCEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-
Q 005734 374 KLNRLELDTACEDFS-----NIIDTQSG-CTIYKGTLSSGVEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF- 446 (680)
Q Consensus 374 ~~~~~~l~~~~~~~~-----~~iG~G~~-g~Vyk~~~~~g~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni- 446 (680)
.++...+..+..+.. .+.--++| -.||+.+.++|..+++|+-.... + ..+++..|.+.+..+....+
T Consensus 7 ~L~pd~i~~al~~~g~~~~~~~~~L~s~EN~vy~v~~~dg~~~VlK~~rp~~---~---s~~~i~~E~~~l~~L~~~gip 80 (325)
T d1zyla1 7 TLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPER---W---TADQILEEHQFALQLVNDEVP 80 (325)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEECCSSSEEEEECCTTCCCEEEEEECTTT---S---CHHHHHHHHHHHHHHHHTTCS
T ss_pred ccCHHHHHHHHHHcCCCCCcCccccccccceeEEEEcCCCCEEEEEEeCCCC---C---CHHHHHHHHHHHHHHHhcCCC
Confidence 345555555555442 11112333 38999999999999999865332 1 12345667777766642222
Q ss_pred -cceeeE-----EecCCCCceEEEEEecCCCChhh-----h---------hcc----C---CCCCCCHH-----------
Q 005734 447 -VNLIGY-----CEDDEPFNRMMVFEYAPNGTVFE-----H---------LHI----K---EMDHLDWN----------- 488 (680)
Q Consensus 447 -v~l~g~-----~~~~~~~~~~lV~ey~~~GsL~~-----~---------l~~----~---~~~~l~~~----------- 488 (680)
+..+.. ....+ ..+.+++++++..+.. + +|. . ....+++.
T Consensus 81 v~~p~~~~g~~~~~~~~--~~~~l~~~~~G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~ 158 (325)
T d1zyla1 81 VAAPVAFNGQTLLNHQG--FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFE 158 (325)
T ss_dssp BCCCCCBTTBSCEEETT--EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHH
T ss_pred CCCceecCCCeeeeeee--EEEEEEeecCCcCCCCCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHH
Confidence 111111 11122 4678999987643221 0 110 0 11122221
Q ss_pred --------HHHHHHHHHHHHHHHHh----cCCCCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 489 --------ARMRIIMGTAYCLQYMH----HELNPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 489 --------~rl~ia~~ia~gL~yLH----~~~~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
.+-.+...+.+.++.+. ......++|+|+.+.|||++++ ..+.||+-+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~ 220 (325)
T d1zyla1 159 DATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDG--PMFVDLDDARN 220 (325)
T ss_dssp TCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred HcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCceeecCCCCcccEEEeCC--ceEEechhccc
Confidence 11111222223333332 2234578999999999999854 46899987654
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.52 E-value=0.0016 Score=57.84 Aligned_cols=107 Identities=14% Similarity=0.148 Sum_probs=54.2
Q ss_pred CcEeEEEcCC-CCCccc----CCcccCCCCCCCEEEccCccCccc----CCcccCCCCCCCEEEccCCcCCcc----Ccc
Q 005734 71 GKVQMLDMKE-RSLEGT----LAPDLGKLSDLRFLVLQKNHFSGV----IPKELGELTKLELLDLSNNKLSGI----IPV 137 (680)
Q Consensus 71 ~~l~~L~l~~-~~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 137 (680)
+.++.|+|++ +.++.. +-..+...+.|+.|+|++|.++.. +-..+...++|+.|++++|.++.. +-.
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 4566666665 334321 223344556666677776666432 112234456666666666666422 123
Q ss_pred ccCCCCCCcEEEc--cCCcccc----cCChhhcCCCCCCeeeccCc
Q 005734 138 EISRLPSLKRLLL--GNNKFEG----SIPLELSRFTLLSELQFDDY 177 (680)
Q Consensus 138 ~~~~l~~L~~L~L--~~N~l~g----~~P~~l~~l~~L~~L~l~~N 177 (680)
.+...++|+.++| ++|.+.. .+...+...++|+.|+++.+
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 3445556655433 3444432 23334455566666666544
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.66 E-value=0.056 Score=54.62 Aligned_cols=73 Identities=12% Similarity=0.132 Sum_probs=45.5
Q ss_pred cccCCCCCCeEEEEEeCCC--------CEEEEEEeeeccchhhHHHHHHHHHHHHHHHHcCCCCcc-cceeeEEecCCCC
Q 005734 389 NIIDTQSGCTIYKGTLSSG--------VEIAVAATAITSSKDWLKSQEMAYRKQVDTLSRINHKNF-VNLIGYCEDDEPF 459 (680)
Q Consensus 389 ~~iG~G~~g~Vyk~~~~~g--------~~vaVK~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~ 459 (680)
+.|+.|-.-.+|+...+++ ..|.+++.. .. .. ..+..+|..+++.+.-.++ .++++++. +
T Consensus 48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~-~~-----~idr~~E~~i~~~ls~~gl~Pkll~~~~--~-- 116 (395)
T d1nw1a_ 48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NP-ET-----ESHLVAESVIFTLLSERHLGPKLYGIFS--G-- 116 (395)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SC-CC-----HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Cc-ch-----hhHHHHHHHHHHHHHhCCCCCeEEEEcC--C--
Confidence 6777788889999987543 446665543 21 11 1123467778877743344 46777763 2
Q ss_pred ceEEEEEecCCCChh
Q 005734 460 NRMMVFEYAPNGTVF 474 (680)
Q Consensus 460 ~~~lV~ey~~~GsL~ 474 (680)
.+|+||+++.++.
T Consensus 117 --g~I~efi~g~~l~ 129 (395)
T d1nw1a_ 117 --GRLEEYIPSRPLS 129 (395)
T ss_dssp --EEEECCCCEEECC
T ss_pred --ceEEEEeccccCC
Confidence 6899999875443
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.16 E-value=0.071 Score=51.82 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=27.7
Q ss_pred CCCeeecCCCCCCeeecCCCCeEEcccccccc
Q 005734 509 NPPVAHSNLSSHCIYLTDDYAAKVAEICFTTI 540 (680)
Q Consensus 509 ~~~ivHrDlKp~NILld~~~~~ki~DFGla~~ 540 (680)
..+++|+|+.+.||+++++...-|.||+.+..
T Consensus 182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccccCCcchhhhhcccccceeEeccccccc
Confidence 44799999999999999988778999997753
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=92.31 E-value=0.03 Score=49.10 Aligned_cols=88 Identities=19% Similarity=0.150 Sum_probs=59.2
Q ss_pred CCCCCCCEEEccC-ccCccc----CCcccCCCCCCCEEEccCCcCCccCc----cccCCCCCCcEEEccCCccccc----
Q 005734 92 GKLSDLRFLVLQK-NHFSGV----IPKELGELTKLELLDLSNNKLSGIIP----VEISRLPSLKRLLLGNNKFEGS---- 158 (680)
Q Consensus 92 ~~l~~L~~L~L~~-N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~L~~N~l~g~---- 158 (680)
.+.+.|++|+|++ +.++.. +-..+...+.|+.|+|++|.++...- ..+...++|+.+++++|.+...
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 4567899999987 456422 22345678889999999998864322 2345578889999998887632
Q ss_pred CChhhcCCCCCCeeecc--Cccc
Q 005734 159 IPLELSRFTLLSELQFD--DYLT 179 (680)
Q Consensus 159 ~P~~l~~l~~L~~L~l~--~N~~ 179 (680)
+-..+...++|+.++|+ +|.+
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i 116 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPL 116 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCC
T ss_pred HHHHHHhCccccEEeeccCCCcC
Confidence 23456777888876554 4444
|