Citrus Sinensis ID: 005830
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 675 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 0.974 | 0.691 | 0.901 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | yes | no | 0.968 | 0.689 | 0.885 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.974 | 0.691 | 0.893 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.974 | 0.691 | 0.886 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 0.968 | 0.689 | 0.885 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.970 | 0.690 | 0.883 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.973 | 0.692 | 0.870 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.973 | 0.693 | 0.858 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.971 | 0.691 | 0.855 | 0.0 | |
| Q42556 | 954 | ATPase 9, plasma membrane | no | no | 0.982 | 0.694 | 0.850 | 0.0 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1191 bits (3082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/663 (90%), Positives = 637/663 (96%), Gaps = 5/663 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG LEEIKNE+VDLE IPIEEVFEQLKC+REGL+S+EG R+ +FGPNKLEEKKE
Sbjct: 1 MGG-----LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKE 55
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVME AAIMAIALANGGG+ PDW+DFVGIIVLLVINSTISFIEEN
Sbjct: 56 SKILKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEEN 115
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 116 NAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLK 175
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 176 IDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 235
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQ VLTAIGNFCICSIAVGIV EII+M+P+QHR YR GI+NLLVLLIGGIPIAMPTVLSV
Sbjct: 236 FQTVLTAIGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSV 295
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGV+K
Sbjct: 296 TMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDK 355
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+HV+LLAARASRTENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 356 DHVLLLAARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 415
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV++KVHAVIDK+AERGLRSL VARQE+PEK+KES G
Sbjct: 416 GNWHRASKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGG 475
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 476 PWQFVGLLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 535
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ+KDAS+ ALPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPA
Sbjct: 536 ALLGQNKDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPA 595
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIR
Sbjct: 596 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIR 655
Query: 661 IVV 663
IV+
Sbjct: 656 IVL 658
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1186 bits (3067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/654 (88%), Positives = 622/654 (95%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLG 68
L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPNKLEEKKESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 69 FMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 128
FMWNPLSWVME AA+MAIALANGGGR PDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 129 LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
LMA LAPKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
+S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
AV DATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1186 bits (3067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/658 (89%), Positives = 635/658 (96%)
Query: 5 KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVL 64
KAISLEEIKNE+VDLE+IPIEEVFEQLKC+REGL++DEGA RL +FGPNKLEEK ESK+L
Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62
Query: 65 KFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGN 124
KFLGFMWNPLSWVMEAAA+MAIALANG G+ PDWQDF+GII LLVINSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGN 122
Query: 125 AAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQS 184
AAAALMA LAPKTKVLRDGRWSEQ+A+ILVPGD+IS+KLGDI+PADARLLEGDPLKIDQS
Sbjct: 123 AAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQS 182
Query: 185 ALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKV 244
ALTGESLPVTKNP DEVFSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN VGHFQKV
Sbjct: 183 ALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 245 LTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304
LTAIGNFCICSIA+G++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 364
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+KE+V+
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVL 362
Query: 365 LLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWH 424
LLAARASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++ NWH
Sbjct: 363 LLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWH 422
Query: 425 RASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQL 484
RASKGAPEQIL LCN +EDVR+KVH+++DK+AERGLRSL VAR+ +PEK+KESPG W+
Sbjct: 423 RASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEF 482
Query: 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544
VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+SLLG
Sbjct: 483 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 542
Query: 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604
QDKD++IA+LP++ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKA
Sbjct: 543 QDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 602
Query: 605 DIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
DIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 660
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1173 bits (3035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/663 (88%), Positives = 631/663 (95%), Gaps = 5/663 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG LEEI+NE+VDLE IPIEEVFEQLKC+R+GLTSDEGA R+ +FG NKLEEKKE
Sbjct: 1 MGG-----LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKE 55
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SKVLKFLGFMWNPLSWVME AAIMAIALANGGG+ PDWQDFVGIIVLLVINSTISFIEEN
Sbjct: 56 SKVLKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEEN 115
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMANLAPKTKVLRDGRW EQ+ASILVPGD++SIKLGDIVPADARLLEGDPLK
Sbjct: 116 NAGNAAAALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLK 175
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQS LTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 176 IDQSGLTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 235
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQ+VLTAIGNFCI SIAVGIV EII+M+P+Q RKYR GI+NLLVLLIGGIPIAMPTVLSV
Sbjct: 236 FQQVLTAIGNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSV 295
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSH+LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VD+NL+EVFAKGV+K
Sbjct: 296 TMAIGSHKLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDK 355
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASR ENQDAIDA +VGMLADPKEARAG+REVHFLPFNP DKRTALTYID++
Sbjct: 356 EHVLLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAE 415
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDV++KVH+VI+K+AERGLRSL VARQE+PEK+K+SPG
Sbjct: 416 GNWHRASKGAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGG 475
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 476 PWQFIGLLPLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 535
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ KD S+ +LPVDELIEKADGFAGVFPEHKYEIVKRLQE+KHI GMTGDGVNDAPA
Sbjct: 536 ALLGQSKDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPA 595
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYTIYAVSITIR
Sbjct: 596 LKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIR 655
Query: 661 IVV 663
IV+
Sbjct: 656 IVL 658
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/654 (88%), Positives = 622/654 (95%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLG 68
LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG R+ +FGPNKLEEKKESK+LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 69 FMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 128
FMWNPLSWVMEAAA+MAIALANG R PDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 129 LMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
LMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
++IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/655 (88%), Positives = 619/655 (94%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG R+ +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
A ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
DA++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/657 (87%), Positives = 622/657 (94%)
Query: 6 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLK 65
A LE+I NE+VDLE+IPIEEVF+QLKCSREGL+ EG +RL +FGPNKLEEKKESK+LK
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 66 FLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125
FLGFMWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGI+ LLVINSTISF+EENNAGNA
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 126 AAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
AAALMA LAPKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
LTGESLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
TAIGNFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVIL 365
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 366 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
AARASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLV 485
SKGAPEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ V
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 545
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
KD ++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKAD
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
IGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 658
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/657 (85%), Positives = 614/657 (93%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKF 66
S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG NKLEEK E+K LKF
Sbjct: 5 FSWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKF 64
Query: 67 LGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAA 126
LGFMWNPLSWVME+AAIMAI LANGGG+ PDWQDF+GI+VLL+INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAA 124
Query: 127 AALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
AALMANLAPKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
+IGNFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 SIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLM 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
AARASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+
Sbjct: 365 AARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRS 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VG
Sbjct: 425 SKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG
Sbjct: 485 LLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNS 544
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
KD S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKKADI
Sbjct: 545 KDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI 604
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 663
GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 605 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 661
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1137 bits (2941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/657 (85%), Positives = 613/657 (93%), Gaps = 1/657 (0%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKF 66
IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG NKLEEK E+K LKF
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 67 LGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAA 126
LGFMWNPLSWVMEAAAIMAI LANGGGR PDWQDFVGI LL+INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 127 AALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
AALMANLAPKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
AIGNFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
+ARASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
KD + +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKKADI
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 663
GIAV DATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/663 (85%), Positives = 615/663 (92%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M G+K S ++IKNE +DLE+IPIEEV QL+C+REGLTSDEG RL +FGPNKLEEKKE
Sbjct: 1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
+KVLKFLGFMWNPLSWVME AAIMAIALANGGGR PDWQDFVGI VLL+INSTISFIEEN
Sbjct: 61 NKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GH
Sbjct: 181 IDQSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+ +++ AARASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++
Sbjct: 361 DQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDAN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHR SKGAPEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG
Sbjct: 421 GNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGE 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+ADIGIAVADATDAARSASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVV 663
IV+
Sbjct: 661 IVM 663
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 675 | ||||||
| 6759597 | 954 | plasma membrane H+ ATPase [Prunus persic | 0.980 | 0.693 | 0.945 | 0.0 | |
| 392055980 | 954 | plasma membrane H+-ATPase [Malus xiaojin | 0.980 | 0.693 | 0.941 | 0.0 | |
| 449499538 | 955 | PREDICTED: LOW QUALITY PROTEIN: plasma m | 0.980 | 0.693 | 0.933 | 0.0 | |
| 225429772 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.980 | 0.693 | 0.942 | 0.0 | |
| 224121346 | 955 | autoinhibited H+ ATPase [Populus trichoc | 0.980 | 0.693 | 0.939 | 0.0 | |
| 147800127 | 954 | hypothetical protein VITISV_014422 [Viti | 0.980 | 0.693 | 0.915 | 0.0 | |
| 225446002 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.980 | 0.693 | 0.915 | 0.0 | |
| 224142101 | 954 | predicted protein [Populus trichocarpa] | 0.980 | 0.693 | 0.933 | 0.0 | |
| 356563778 | 951 | PREDICTED: ATPase 5, plasma membrane-typ | 0.976 | 0.692 | 0.935 | 0.0 | |
| 356552575 | 951 | PREDICTED: plasma membrane ATPase 4-like | 0.976 | 0.692 | 0.935 | 0.0 |
| >gi|6759597|emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1249 bits (3231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/662 (94%), Positives = 649/662 (98%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDKAISLEEIKNESVDLERIPIEEVFEQLKC+REGLT DEGA+RL VFGPNKLEEKKE
Sbjct: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCTREGLTGDEGANRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKLLKFLGFMWNPLSWVMEAAAVMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQEASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGILIELIVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEAR G+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARVGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQILALCNC+ED +K+VHAVIDKFAERGLRSL VARQ++PEKTKESPG
Sbjct: 421 GNWHRASKGAPEQILALCNCKEDFKKRVHAVIDKFAERGLRSLAVARQQVPEKTKESPGT 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDASIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IV 662
IV
Sbjct: 661 IV 662
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|392055980|gb|AFM52333.1| plasma membrane H+-ATPase [Malus xiaojinensis] | Back alignment and taxonomy information |
|---|
Score = 1244 bits (3218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/662 (94%), Positives = 647/662 (97%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M GDKAISLEEIKNESVDLERIP+EEVFEQLKC+REGLT +EGA+RL VFGPNKLEEKKE
Sbjct: 1 MAGDKAISLEEIKNESVDLERIPVEEVFEQLKCTREGLTGEEGANRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANGGGR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKLLKFLGFMWNPLSWVMEAAALMAIALANGGGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQDASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQDASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+ EII+MYP+Q RKYR GIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGILIEIIVMYPIQKRKYRQGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+ED +KKVH VIDKFAERGLRSLGVARQ++PEKTKESPG
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDFKKKVHGVIDKFAERGLRSLGVARQQVPEKTKESPGT 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQ+KDA+IA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQNKDAAIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IV 662
IV
Sbjct: 661 IV 662
|
Source: Malus xiaojinensis Species: Malus xiaojinensis Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449499538|ref|XP_004160843.1| PREDICTED: LOW QUALITY PROTEIN: plasma membrane ATPase 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1241 bits (3212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/663 (93%), Positives = 641/663 (96%), Gaps = 1/663 (0%)
Query: 1 MGGD-KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK 59
MGGD KAI+LEEIKNE+VDLE IPIEEVFEQLKC+REGLTS+EGAHRL VFGPNKLEEKK
Sbjct: 1 MGGDHKAITLEEIKNEAVDLEHIPIEEVFEQLKCTREGLTSEEGAHRLQVFGPNKLEEKK 60
Query: 60 ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEE 119
ESK+LKFLGFMWNPLSWVMEAAA+MAI LANGGGR PDWQDFVGII LL INSTISFIEE
Sbjct: 61 ESKLLKFLGFMWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEE 120
Query: 120 NNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
NNAGNAAAALMA LAPKTKVLRDGRWSEQ+A+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 121 NNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPL 180
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239
KIDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG
Sbjct: 181 KIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVG 240
Query: 240 HFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLS 299
HFQKVLTAIGNFCICSIAVGI+ E+I+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLS
Sbjct: 241 HFQKVLTAIGNFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLS 300
Query: 300 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE 359
VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR+LIEVF KGVE
Sbjct: 301 VTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLIEVFVKGVE 360
Query: 360 KEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDS 419
KE+VILLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDS
Sbjct: 361 KEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDS 420
Query: 420 DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPG 479
+G WHR SKGAPEQIL LCN REDVR+KVHAVIDKFAERGLRSLGVARQE+ EK K+SPG
Sbjct: 421 NGTWHRVSKGAPEQILNLCNSREDVRRKVHAVIDKFAERGLRSLGVARQEVHEKXKDSPG 480
Query: 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 539
PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS
Sbjct: 481 GPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 540
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
SSLLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP
Sbjct: 541 SSLLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 600
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659
ALKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI
Sbjct: 601 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 660
Query: 660 RIV 662
RIV
Sbjct: 661 RIV 663
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429772|ref|XP_002282619.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1239 bits (3207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/662 (94%), Positives = 643/662 (97%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M DK+I LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGA RL +FGPNKLEEKKE
Sbjct: 1 MAADKSIGLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGASRLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGG+ PDWQDFVGIIVLL+INSTISFIEEN
Sbjct: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGQPPDWQDFVGIIVLLLINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRW+EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWTEQDAAILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEI+AVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIDAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF KGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFTKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHVILLAARASR ENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVILLAARASRIENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LCNC+EDVRKKVH VIDKFAERGLRSL VARQE+PEKTK++PGA
Sbjct: 421 GTWHRASKGAPEQILNLCNCKEDVRKKVHGVIDKFAERGLRSLAVARQEVPEKTKDAPGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLL LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 481 PWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IV 662
IV
Sbjct: 661 IV 662
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121346|ref|XP_002330804.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222872606|gb|EEF09737.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1237 bits (3201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/662 (93%), Positives = 647/662 (97%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M ISLEEIKNESVDLERIP+EEVFEQLKC+REGL++DEGA RL VFGPNKLEEKKE
Sbjct: 1 MSSKGGISLEEIKNESVDLERIPMEEVFEQLKCTREGLSADEGASRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAIALANG GR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKILKFLGFMWNPLSWVMEAAALMAIALANGDGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDASILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDASILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI+AE+I+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGIIAELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD +LIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDTSLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV+KKVH+VIDKFAERGLRSLGVA+QE+PEK+K++ GA
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDVKKKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAAGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQLVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IV 662
IV
Sbjct: 661 IV 662
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800127|emb|CAN64375.1| hypothetical protein VITISV_014422 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1234 bits (3192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/662 (91%), Positives = 640/662 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDK+ISLEEIKNE+VDLE+IPIEEVFEQLKC++EGLTS EG RL +FGPNKLEEKKE
Sbjct: 1 MGGDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEEN
Sbjct: 61 SKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 VDQSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+
Sbjct: 421 GKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGS 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IV 662
IV
Sbjct: 661 IV 662
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446002|ref|XP_002267501.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] gi|297735422|emb|CBI17862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1233 bits (3191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/662 (91%), Positives = 640/662 (96%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGGDK+ISLEEIKNE+VDLE+IPIEEVFEQLKC++EGLTS EG RL +FGPNKLEEKKE
Sbjct: 1 MGGDKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAA+MAI LANG G+ PDWQDFVGI+ LLVINSTISFIEEN
Sbjct: 61 SKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 VDQSALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVG++ EII+MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNL+EVFAKGV+K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID+D
Sbjct: 361 EHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDAD 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
G WHRASKGAPEQIL LC C+EDV+KK H++IDKFAERGLRSL V RQE+PEK+KES G+
Sbjct: 421 GKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGS 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+
Sbjct: 481 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSA 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDASIAALPV+ELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IV 662
IV
Sbjct: 661 IV 662
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142101|ref|XP_002324397.1| predicted protein [Populus trichocarpa] gi|222865831|gb|EEF02962.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1229 bits (3179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/662 (93%), Positives = 645/662 (97%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
M ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGA RL VFGPNKLEEKKE
Sbjct: 1 MSSKGGISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGATRLQVFGPNKLEEKKE 60
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK+LKFLGFMWNPLSWVMEAAA+MAI LANG GR PDWQDFVGI+VLLVINSTISFIEEN
Sbjct: 61 SKILKFLGFMWNPLSWVMEAAALMAIVLANGDGRPPDWQDFVGIVVLLVINSTISFIEEN 120
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRDGRWSEQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIVPADARLLEGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTKNP DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 181 IDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+GI+ EI++MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGIIIEIVVMYPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++LIEVFAKGVEK
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFAKGVEK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
EHV+LLAARASRTENQDAIDAAIVGMLADPKEARAG+REVHFLPFNPVDKRTALTYID++
Sbjct: 361 EHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQIL LCNC+EDV++KVH+VIDKFAERGLRSLGVA+QE+PEK+K++PGA
Sbjct: 421 GNWHRASKGAPEQILTLCNCKEDVKRKVHSVIDKFAERGLRSLGVAKQEVPEKSKDAPGA 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQLVGLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS
Sbjct: 481 PWQLVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
SLLGQDKDA+IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 541 SLLGQDKDAAIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IV 662
IV
Sbjct: 661 IV 662
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563778|ref|XP_003550136.1| PREDICTED: ATPase 5, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1228 bits (3176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/662 (93%), Positives = 644/662 (97%), Gaps = 3/662 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG ISLEEIKNE+VDLERIPIEEVFEQLKCSR GLTS+EG +RL VFGPNKLEEKKE
Sbjct: 1 MGG---ISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGGNRLQVFGPNKLEEKKE 57
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEEN
Sbjct: 58 SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEEN 117
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NAGNAAAALMAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLS 177
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 178 VDQSALTGESLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 237
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGIV E+I+MYP+QHR+YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 238 FQKVLTAIGNFCICSIAVGIVIELIVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSV 297
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 357
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
E+VILLAARASRTENQDAIDAAIVGMLADPKEAR+G+REVHFLPFNPVDKRTALTYIDSD
Sbjct: 358 EYVILLAARASRTENQDAIDAAIVGMLADPKEARSGIREVHFLPFNPVDKRTALTYIDSD 417
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG
Sbjct: 418 GNWHRASKGAPEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGG 477
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 478 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 537
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 538 ALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 597
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 598 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 657
Query: 661 IV 662
IV
Sbjct: 658 IV 659
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552575|ref|XP_003544641.1| PREDICTED: plasma membrane ATPase 4-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1227 bits (3174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/662 (93%), Positives = 644/662 (97%), Gaps = 3/662 (0%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE 60
MGG ISLEEIKNE+VDLERIPIEEVFEQLKCSR GLTS+EGA+RL VFGPNKLEEKKE
Sbjct: 1 MGG---ISLEEIKNENVDLERIPIEEVFEQLKCSRAGLTSEEGANRLQVFGPNKLEEKKE 57
Query: 61 SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEEN 120
SK LKFLGFMWNPLSWVMEAAAIMAIALANGGGR PDWQDFVGII LLVINSTISFIEEN
Sbjct: 58 SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLVINSTISFIEEN 117
Query: 121 NAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
NAGNAAAALMA LAPKTKVLRD RWSEQDA+ILVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NAGNAAAALMAGLAPKTKVLRDNRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLS 177
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
+DQSALTGESLPVTK+P DEVFSGST K+GEIEAVVIATGVHTFFGKAAHLVDSTNQVGH
Sbjct: 178 VDQSALTGESLPVTKSPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 237
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIAVGI E+I+MYP+QHR+YR+GIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 238 FQKVLTAIGNFCICSIAVGIAIELIVMYPIQHRRYREGIDNLLVLLIGGIPIAMPTVLSV 297
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDRNLIEVFAKGVEK
Sbjct: 298 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEK 357
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
E+VILLAARASRTENQDAIDAAIVGMLADPKEAR+GVREVHFLPFNPVDKRTALTYIDSD
Sbjct: 358 EYVILLAARASRTENQDAIDAAIVGMLADPKEARSGVREVHFLPFNPVDKRTALTYIDSD 417
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHRASKGAPEQI+ LCNC+EDVR+KVHAVIDKFAERGLRSLGVARQE+PEK+K+SPG
Sbjct: 418 GNWHRASKGAPEQIITLCNCKEDVRRKVHAVIDKFAERGLRSLGVARQEVPEKSKDSPGG 477
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 478 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 537
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKDASI+ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA
Sbjct: 538 ALLGQDKDASISALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 597
Query: 601 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 598 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 657
Query: 661 IV 662
IV
Sbjct: 658 IV 659
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 675 | ||||||
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.968 | 0.689 | 0.804 | 2.3e-284 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.968 | 0.689 | 0.801 | 3.9e-282 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.973 | 0.692 | 0.785 | 8.3e-280 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.982 | 0.694 | 0.766 | 8.9e-276 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.971 | 0.691 | 0.777 | 8.9e-276 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.979 | 0.691 | 0.780 | 1.3e-274 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.971 | 0.691 | 0.773 | 3.1e-273 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.970 | 0.682 | 0.775 | 4.1e-271 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.967 | 0.679 | 0.699 | 4.1e-246 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.967 | 0.689 | 0.704 | 9.9e-245 |
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2732 (966.8 bits), Expect = 2.3e-284, P = 2.3e-284
Identities = 526/654 (80%), Positives = 567/654 (86%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPN G
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NGGGR PDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PKTKVLRD +WSEQ+ASILVPGDVISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ES+PVTKNP DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI+ E+++MYP+Q R+YRDGIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVD+NL+EVFAKGV KEHV LLAA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPKEARAGVREVHF PFNPVDKRTALTY+DSDGNWHRASK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL LCNC+EDVR+KVH VIDKFAERGLRSL VARQE+ EK K++PG PWQLVGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
+S+ ALPVDELIEKADGFAGVFPEHKYEIV RLQ+R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2711 (959.4 bits), Expect = 3.9e-282, P = 3.9e-282
Identities = 524/654 (80%), Positives = 565/654 (86%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG R+ +FGPN G
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NG R PDWQDFVGII LLVINSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIA+GI EI++MYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYIDSDGNWHR SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L N R D+RKKV + IDK+AERGLRSL VARQ +PEKTKESPG PW+ VGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS++LLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
++IA++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2689 (951.6 bits), Expect = 8.3e-280, P = 8.3e-280
Identities = 516/657 (78%), Positives = 565/657 (85%)
Query: 6 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXX 65
A LE+I NE+VDLE+IPIEEVF+QLKCSREGL+ EG +RL +FGPN
Sbjct: 2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 61
Query: 66 XXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXX 125
GFMWNPLSWVME NGGG+ PDWQDFVGI+ LLVINSTISF+EE
Sbjct: 62 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNA 121
Query: 126 XXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
PKTKVLRDG+WSEQ+ASILVPGD++SIKLGDI+PADARLLEGDPLK+DQSA
Sbjct: 122 AAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSA 181
Query: 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 245
LTGESLP TK P +EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL
Sbjct: 182 LTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL 241
Query: 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305
TAIGNFCICSIAVGI EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG
Sbjct: 242 TAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 301
Query: 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVIL 365
SH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEV+ KGVEK+ V+L
Sbjct: 302 SHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLL 361
Query: 366 LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
AARASR ENQDAIDAA+VGMLADPKEARAG+RE+HFLPFNPVDKRTALT+IDS+GNWHR
Sbjct: 362 FAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHR 421
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLV 485
SKGAPEQIL LCN R D+RK+VH+ IDK+AERGLRSL V+RQ +PEKTKES G+PW+ V
Sbjct: 422 VSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFV 481
Query: 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ 545
G+LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSSSLLG+
Sbjct: 482 GVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGK 541
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXX 605
KD ++A +PV++LIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 542 HKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKAD 601
Query: 606 XXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 602 IGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 658
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2651 (938.3 bits), Expect = 8.9e-276, P = 8.9e-276
Identities = 508/663 (76%), Positives = 558/663 (84%)
Query: 1 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXX 60
M G+K S ++IKNE +DLE+IPIEEV QL+C+REGLTSDEG RL +FGPN
Sbjct: 1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKE 60
Query: 61 XXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEX 120
GFMWNPLSWVME NGGGR PDWQDFVGI VLL+INSTISFIEE
Sbjct: 61 NKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120
Query: 121 XXXXXXXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
PKTKVLRDG+WSEQ+A+ILVPGD+ISIKLGDIVPAD RLL+GDPLK
Sbjct: 121 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLK 180
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGH 240
IDQSALTGESLPVTK+P EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQ GH
Sbjct: 181 IDQSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGH 240
Query: 241 FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSV 300
FQKVLTAIGNFCICSIA+G++ EI++MYP+Q R YRDGIDNLLVLLIGGIPIAMPTVLSV
Sbjct: 241 FQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSV 300
Query: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360
TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD++++EVF K ++K
Sbjct: 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDK 360
Query: 361 EHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
+ +++ AARASR ENQDAIDA IVGML DP+EAR G+ EVHF PFNPVDKRTA+TYID++
Sbjct: 361 DQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDAN 420
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
GNWHR SKGAPEQI+ LCN RED K+ H +IDKFA+RGLRSL V RQ + EK K SPG
Sbjct: 421 GNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGE 480
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
PWQ +GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS
Sbjct: 481 PWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPA 600
+LLGQDKD SIA+LPVDELIEKADGFAGVFPEHKYEIVKRLQE KHICGMTGDGVNDAPA
Sbjct: 541 ALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPA 600
Query: 601 LKKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660
LK+ VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIR
Sbjct: 601 LKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR 660
Query: 661 IVV 663
IV+
Sbjct: 661 IVM 663
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2651 (938.3 bits), Expect = 8.9e-276, P = 8.9e-276
Identities = 510/656 (77%), Positives = 558/656 (85%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXX 67
S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG N
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 68 GFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXX 127
GFMWNPLSWVME NGGG+ PDWQDF+GI+VLL+INSTISFIEE
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 128 XXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
PKTKVLRDG+W EQ+ASILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLP TK+P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSI +G++ EI+IMYP+QHR YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD++LIEVF K ++ + V+L+A
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARASR ENQDAIDA+IVGML DPKEARAG+ EVHFLPFNPVDKRTA+TYID G+WHR+S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQI+ LCN + + ++K H VID FAERGLRSLGVA+Q +PEKTKES G+PW+ VGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS+SLLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXX 607
D S+ +P+DELIEKADGFAGVFPEHKYEIVK+LQERKHICGMTGDGVNDAPALKK
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 608 XXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 663
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 661
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2640 (934.4 bits), Expect = 1.3e-274, P = 1.3e-274
Identities = 516/661 (78%), Positives = 554/661 (83%)
Query: 3 GDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXX 62
GDK LE + E+VDLE +PIEEVFE L+CSREGLT++ RL +FG N
Sbjct: 2 GDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESK 61
Query: 63 XXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXX 122
GFMWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 62 FLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNA 121
Query: 123 XXXXXXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKID 182
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKID
Sbjct: 122 GNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKID 181
Query: 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 242
QS+LTGESLPVTK P D V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHFQ
Sbjct: 182 QSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQ 241
Query: 243 KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
+VLTAIGNFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 242 QVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
Query: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEH 362
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ +
Sbjct: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADT 361
Query: 363 VILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGN 422
V+L+AA+ASR ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP DKRTALTYIDSDG
Sbjct: 362 VVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGK 421
Query: 423 WHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
HR SKGAPEQIL L + R ++ ++VHAVIDKFAERGLRSL VA QE+PE TKES G PW
Sbjct: 422 MHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPW 481
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
Q +GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+L
Sbjct: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
LGQ KD SI ALP+D+LIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALK
Sbjct: 542 LGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
Query: 603 KXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 662
K VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661
Query: 663 V 663
+
Sbjct: 662 L 662
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2627 (929.8 bits), Expect = 3.1e-273, P = 3.1e-273
Identities = 508/657 (77%), Positives = 558/657 (84%)
Query: 7 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXX 66
IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG N
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 67 XGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXX 126
GFMWNPLSWVME NGGGR PDWQDFVGI LL+INSTISFIEE
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 127 XXXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
PKTKVLRDGRW EQ+A+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 246
TGESLP TK+ DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN VGHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306
AIGNFCICSI +G++ EIIIMYP+QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILL 366
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF+K V+K++VILL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRA 426
+ARASR ENQDAID +IV ML DPKEARAG+ EVHFLPFNPV+KRTA+TYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 427 SKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
SKGAPEQI+ LC+ + + +++ H +IDKFAERGLRSLGVARQ +PEK KES G PW+ VG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL ++
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXX 606
KD + +PVDELIEKADGFAGVFPEHKYEIV++LQERKHI GMTGDGVNDAPALKK
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 607 XXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 663
VLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 660
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2607 (922.8 bits), Expect = 4.1e-271, P = 4.1e-271
Identities = 508/655 (77%), Positives = 552/655 (84%)
Query: 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXG 68
LE + E+VDLE +PIEEVFE L+CS+EGLT+ RL +FG N G
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 69 FMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXX 128
FMWNPLSWVME NGGG+ PDWQDFVGII LLVINSTISFIEE
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 129 XXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
PK KVLRDGRW EQDA+ILVPGD+ISIKLGDIVPADARLLEGDPLKIDQSALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 189 ESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248
ESLPVTK+ D V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ+GHFQ+VLTAI
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
GNFCICSIAVG++ EI++MYP+QHR YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD+NLIEVF KGV+ + V+L+AA
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAA 371
Query: 369 RASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASK 428
RASR ENQDAIDAAIVGMLADPK+ARAG++EVHFLPFNP DKRTALTYID++GN HR SK
Sbjct: 372 RASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSK 431
Query: 429 GAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488
GAPEQIL L + + ++ ++VHAVIDKFAERGLRSL VA Q++PE K+S G PWQ VGL+
Sbjct: 432 GAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLM 491
Query: 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKD 548
PLFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSS+LLGQ+KD
Sbjct: 492 PLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 551
Query: 549 ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXX 608
SI ALPVDELIEKADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 552 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 611
Query: 609 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 663
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 612 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVL 666
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2371 (839.7 bits), Expect = 4.1e-246, P = 4.1e-246
Identities = 459/656 (69%), Positives = 529/656 (80%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXX 67
+L+ I ES+DLE +P+EEVF+ LKC++EGLTS+E RL +FG N
Sbjct: 6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFL 65
Query: 68 GFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXX 127
GFMWNPLSWVME +GGG+ D+ DFVGI+VLL+INSTISF+EE
Sbjct: 66 GFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAA 125
Query: 128 XXXXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
PK K +RDG+W+E DA+ LVPGD++SIKLGDI+PADARLLEGDPLKIDQ+ LT
Sbjct: 126 ALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLT 185
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTKNP V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST VGHFQKVLTA
Sbjct: 186 GESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTA 245
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIAVG+ EI+++Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+H
Sbjct: 246 IGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAH 305
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLIEVF +G++++ +L+A
Sbjct: 306 RLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMA 365
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
ARA+R ENQDAID AIV ML+DPKEARAG++E+HFLPF+P ++RTALTY+D +G HR S
Sbjct: 366 ARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVS 425
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPE+IL + + + ++++KVHA IDKFAERGLRSLG+A QE+P+ + G PW V L
Sbjct: 426 KGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVAL 485
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAI KETGRRLGMGTNMYPSSSLL +
Sbjct: 486 LPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDNN 545
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXX 607
++ VDELIE ADGFAGVFPEHKYEIVKRLQ RKHICGMTGDGVNDAPALKK
Sbjct: 546 TEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIG 602
Query: 608 XXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 663
VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 603 IAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVM 658
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2358 (835.1 bits), Expect = 9.9e-245, P = 9.9e-245
Identities = 461/654 (70%), Positives = 519/654 (79%)
Query: 10 EEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGF 69
+ + +DL +P+EEVFE L+ S +GL S + RL +FGPN GF
Sbjct: 13 DTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGF 72
Query: 70 MWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEXXXXXXXXXX 129
MWNPLSWVME N PDW+DF GI+ LL+IN+TISF EE
Sbjct: 73 MWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAAL 132
Query: 130 XXXXXPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGE 189
KT+VLRDG+W EQDASILVPGD+ISIKLGDI+PADARLLEGDPLKIDQS LTGE
Sbjct: 133 MARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGE 192
Query: 190 SLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIG 249
SLPVTK ++VFSGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IG
Sbjct: 193 SLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIG 252
Query: 250 NFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309
NFCICSIAVG+V EIIIM+PVQHR YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRL
Sbjct: 253 NFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312
Query: 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAAR 369
SQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVD+NLIEVF ++K+ ++LLA R
Sbjct: 313 SQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGR 372
Query: 370 ASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
ASR ENQDAIDAAIV MLADP+EARA +RE+HFLPFNPVDKRTA+TYIDSDG W+RA+KG
Sbjct: 373 ASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKG 432
Query: 430 APEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLP 489
APEQ+L LC + ++ ++V+A+ID+FAE+GLRSL VA QEIPEK+ SPG PW+ GLLP
Sbjct: 433 APEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLP 492
Query: 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 549
LFDPPRHDS ETI RAL+LGV VKMITGDQLAI KETGRRLGMGTNMYPSSSLLG + D
Sbjct: 493 LFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDE 552
Query: 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKXXXXXX 609
A+PVDELIE ADGFAGVFPEHKYEIVK LQE KH+ GMTGDGVNDAPALKK
Sbjct: 553 H-EAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIA 611
Query: 610 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVV 663
VLT+PGLSVIISAVLTSRAIFQRM+NYT+YAVSITIRIV+
Sbjct: 612 VADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVL 665
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8936 | 0.9748 | 0.6911 | N/A | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8567 | 0.9822 | 0.6927 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.8562 | 0.9792 | 0.6914 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8868 | 0.9748 | 0.6919 | N/A | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.8853 | 0.9688 | 0.6891 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8625 | 0.9703 | 0.6851 | N/A | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.9019 | 0.9748 | 0.6919 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 675 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-169 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-115 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-91 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-89 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 8e-82 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 6e-81 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 8e-71 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-64 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-60 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-59 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 8e-59 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-55 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-50 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-41 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 8e-37 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-35 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-34 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-33 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-30 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-28 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 8e-28 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-26 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-26 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 9e-19 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 3e-18 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 6e-14 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-08 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-07 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 4e-07 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 5e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.001 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.003 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 0.004 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 0.004 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 994 bits (2572), Expect = 0.0
Identities = 376/629 (59%), Positives = 465/629 (73%), Gaps = 20/629 (3%)
Query: 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96
GLTS E RL +GPN+L EKK S +LKFLGF WNPLSWVMEAAAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156
W DFV I+ LL++N+TI FIEEN AGNA AL +LAPK +VLRDG+W E AS LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 216
DV+ +K+GDIVPAD RL EGD +++DQ+ALTGESLPVTK D +SGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 217 IATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275
ATG++TFFGKAA LV ST GH QK+L+ IG F I I V ++ E+++++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335
R+G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395
TGTLTLNKL++D L F G +K+ V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 396 GVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHAVIDK 454
G + + F+PF+PVDKRT T D + G + +KGAP+ IL LC+ ++++ +KV +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514
A RG R+LGVAR W +GLLPLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574
+TGD LAI KET RRLG+GTN+Y + LL D + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLGEMVEDADGFAEVFPEHK 522
Query: 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 634
YEIV+ LQ+R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 635 SAVLTSRAIFQRMKNYTIYAVSITIRIVV 663
A+L SR IFQRMK+Y IY ++ TIRIV
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVF 611
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 508 bits (1309), Expect = e-169
Identities = 226/707 (31%), Positives = 354/707 (50%), Gaps = 74/707 (10%)
Query: 20 ERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWV 77
+ E+ +L S GL+ +E RL +GPN+L EEKK S + KFL +P +
Sbjct: 26 LSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIIL 85
Query: 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
+ AA+++ + G D + I++++VIN+ + F++E A A AL +PK
Sbjct: 86 LLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKA 142
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
KVLRDG++ E AS LVPGD++ ++ GD+VPAD RLLE L++D+SALTGESLPV K
Sbjct: 143 KVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQA 202
Query: 198 YDE--------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV-GHFQ 242
+FSG+T G + +V+ATG T FGK A L+ + +V Q
Sbjct: 203 LPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQ 262
Query: 243 KVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL------LVLLIGGIPIAMPT 296
+ L +G F + ++A ++ +R G L L L + +P +P
Sbjct: 263 RKLNKLGKF------LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPA 316
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---------- 346
V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK+TV
Sbjct: 317 VVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGK 376
Query: 347 DRNLIEVFAKGVEKEHVILLAARASRTENQ-------DAIDAAIV------GMLADPKEA 393
D + ++ ++ A S T + D + A+V G D
Sbjct: 377 DIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGL 436
Query: 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC-------NCREDVRK 446
+ +PF+ KR ++ +G + KGAPE IL C E+ +
Sbjct: 437 EVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLR 496
Query: 447 KVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ----LVGLLPLFDPPRHDSAETI 502
+ + + A GLR L VA +++ K+ + +GL + DPPR D E I
Sbjct: 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAI 556
Query: 503 RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL--- 559
G+ V MITGD + + G+ + + G + + AL +EL
Sbjct: 557 EELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE----LDALSDEELAEL 612
Query: 560 IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD-ATDAAR 618
+E+ FA V PE K IV+ LQ+ H+ MTGDGVNDAPALK AD+GIA+ TDAA+
Sbjct: 613 VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAK 672
Query: 619 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSV 665
A+DIVL + + I+ AV+ R ++ +K + +Y +S + V+++
Sbjct: 673 EAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTL 719
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 355 bits (912), Expect = e-115
Identities = 184/582 (31%), Positives = 280/582 (48%), Gaps = 78/582 (13%)
Query: 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPKTK--VLRDGRWSEQDASILVPGDVISI 161
I+ L+++ + ++ A + +L L VLR+G W E A LVPGDV+ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 162 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGE 211
K G+ VPAD LL G +D+S LTGES PV K D VF+G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 212 IEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV 270
+ VV TG+ T G+ A +V + Q + NF I + + ++A + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 271 QH----RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326
+ L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGM 386
+D LCSDKTGTLT NK+T+ I G E L+A + + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYI---DGGKEDNSSSLVACDNNYL-SGDPMEKALLKS 294
Query: 387 LADPKEARAGVRE---VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRED 443
+A G +E + PF+ V KR ++ DG+ KGAPE IL CN
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN---- 350
Query: 444 VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIR 503
+ A +GLR L A +E+ + + +GL+ DP R D+ ETI
Sbjct: 351 ---NYEEKYLELARQGLRVLAFASKELED--------DLEFLGLITFEDPLRPDAKETIE 399
Query: 504 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563
G+ V MITGD + K + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 564 DGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 623
D FA V PE K +IV+ LQ++ HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 624 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSV 665
VL + LS I+ AV R IF +K+ +A++ + ++
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLA 525
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 301 bits (773), Expect = 5e-91
Identities = 207/715 (28%), Positives = 342/715 (47%), Gaps = 94/715 (13%)
Query: 16 SVDLERIPIEEVFEQLKCSRE-GLTS-DEGAHRLHVFGPNKLE-EKKESKVLKFLG-FMW 71
S + +EE +L+ + GL S E +HR G N+ + E+ ES KFL F+
Sbjct: 1 SKQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVK 60
Query: 72 NPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMA 131
NPL ++ A+A++++ + N D V I + ++I T+ F++E + + AL
Sbjct: 61 NPLILLLIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNK 113
Query: 132 NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESL 191
+ P+ ++R+G+ AS LVPGD++ + +GD VPAD R++E L ID+S LTGE+
Sbjct: 114 LVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETT 173
Query: 192 PVTK-------NPYDEV-------FSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237
PV+K ++ F G+ + G + +V+ TG +T FG ++ + +
Sbjct: 174 PVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK 233
Query: 238 VGH-FQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPT 296
QK + +G + ++ G++ I ++ Q + + + + L + IP +P
Sbjct: 234 PKTPLQKSMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPI 292
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV------DRNL 350
+++VT+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV D
Sbjct: 293 IVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLH 352
Query: 351 IEVFAKGVEK-EHVILLAARASRTENQD--------------------------AIDAAI 383
+ A + + VI+ D A+
Sbjct: 353 TMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVAL 412
Query: 384 VGMLA-----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS-KGAPEQILAL 437
+ +L D +E V EV PF+ K A+ + KGA EQ+L
Sbjct: 413 IELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKY 469
Query: 438 CN-----------CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG 486
C + R + + A GLR + A PEK + + +G
Sbjct: 470 CTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASG--PEKGQLT------FLG 521
Query: 487 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
L+ + DPPR E + + GV + MITGD RRLGM S S+ G+
Sbjct: 522 LVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP--SKTSQSVSGEK 579
Query: 547 KDA-SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
DA L +++ K FA PEHK +IVK LQ+R + MTGDGVNDAPALK AD
Sbjct: 580 LDAMDDQQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLAD 637
Query: 606 IGIAVAD-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659
IG+A+ TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++
Sbjct: 638 IGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV 692
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 297 bits (763), Expect = 1e-89
Identities = 205/690 (29%), Positives = 332/690 (48%), Gaps = 73/690 (10%)
Query: 23 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEAA 81
E + +L GLT+ E RL FGPN+ EEKK + + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 82 AIMAIALANGGGRDPDWQDFVGIIVLLVINSTI-SFIEENNAGNAAAALMANLAPKTKVL 140
+M ++ D + II L+V+ S + FI+E+ A AA AL + VL
Sbjct: 77 MLMGVSYLT------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL 130
Query: 141 R------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 194
R +G E LVPGD+I + GDI+PADAR++ L I+QSALTGESLPV
Sbjct: 131 RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVE 190
Query: 195 K----------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 241
K + F G+ G +AVV+ATG T+FG A F
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAF 250
Query: 242 QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 301
K + ++ I + V +V ++++ + + + L + +G P +P ++S
Sbjct: 251 DKGVKSVSKLLIRFMLV-MVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSN 309
Query: 302 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 361
+A G+ +S++ I K ++AI+ MD+LC+DKTGTLT +K+ +++++ + G E
Sbjct: 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSE 366
Query: 362 HVILLA--ARASRTENQDAIDAAIVGMLAD--PKEARAGVREVHFLPFNPVDKRTALTYI 417
V+ +A +T ++ +D A++ L + ++ + ++V +PF+ +R ++ +
Sbjct: 367 RVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVV-V 425
Query: 418 DSDGNWHR-ASKGAPEQILALCN----------CREDVRKKVHAVIDKFAERGLRSLGVA 466
++ R KGA E++L +C E + ++ + + +G+R + VA
Sbjct: 426 ENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 467 RQEIP------EKTKESPGAPWQLV--GLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518
+ + KT E QL+ G L DPP+ + E I G+NVK++TGD
Sbjct: 486 TKTLKVGEADFTKTDEE-----QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
Query: 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL---IEKADGFAGVFPEHKY 575
+ + +G+ N + LLG D I L +EL + K FA + P K
Sbjct: 541 NEIVTARICQEVGIDANDF----LLGAD----IEELSDEELARELRKYHIFARLTPMQKS 592
Query: 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635
I+ L++ H G GDG+NDAPAL+KAD+GI+V A D A+ ASDI+L E L V+
Sbjct: 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEE 652
Query: 636 AVLTSRAIFQRMKNYTIYAVSITIRIVVSV 665
V+ R F + Y S V SV
Sbjct: 653 GVIEGRNTFGNILKYLKMTASSNFGNVFSV 682
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 8e-82
Identities = 209/703 (29%), Positives = 322/703 (45%), Gaps = 118/703 (16%)
Query: 23 PIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWV-MEA 80
+EE L R+GLT ++ A RL +GPN++ EK +++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 81 AAI---MAIALANGGGRDPDWQDFVGIIVLLV---INSTISFIEENNAGNAAAALMANLA 134
AAI L G + D G+I++L ++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDL---TGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR 147
Query: 135 PKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTG 188
VLR + E LVPGD++ + GD++PAD RL+E L I Q+ LTG
Sbjct: 148 TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTG 207
Query: 189 ESLPVTKNPYDEV-------------------------FSGSTCKQGEIEAVVIATGVHT 223
E+LPV K YD + F G+ G AVV+ATG T
Sbjct: 208 EALPVEK--YDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265
Query: 224 FFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLL 283
+FG A + T F + + S++ ++ +++M PV
Sbjct: 266 YFGSLAKSIVGTRAQTAFDR--------GVNSVSWLLIRFMLVMVPV------------- 304
Query: 284 VLLIGGI--------------------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIE 323
VLLI G P +P ++S +A G+ ++++ + KR+ AI+
Sbjct: 305 VLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQ 364
Query: 324 EMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTEN--QDAIDA 381
MDVLC+DKTGTLT +++ ++ +L G + E V+ LA S ++ ++ +D
Sbjct: 365 NFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421
Query: 382 AIV--GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN 439
A+V AG R+V LPF+ V +R ++ D+ G KGA E++LA+
Sbjct: 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVAT 481
Query: 440 CRED----------VRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESP---GAPWQLV- 485
D R+++ A+ + + G R L VA +EIP + LV
Sbjct: 482 HVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVI 541
Query: 486 -GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544
G L DPP+ +A I GV VK++TGD + + R +G+ P LLG
Sbjct: 542 RGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLG 597
Query: 545 QDKDASIAALPVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601
+ I A+ L +E+ FA + P K ++K LQ H G GDG+NDAPAL
Sbjct: 598 TE----IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPAL 653
Query: 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 644
+ AD+GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 654 RDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 275 bits (704), Expect = 6e-81
Identities = 203/699 (29%), Positives = 326/699 (46%), Gaps = 108/699 (15%)
Query: 17 VDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMW----N 72
+ +P EE+++ EGL E G N+L +K L W N
Sbjct: 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVCYRN 103
Query: 73 PLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINST-ISFIEENNAGNAAAALMA 131
P + ++ ++ A + G+I L+V ST ++FI+E + AA AL A
Sbjct: 104 PFNILLTILGAISYATEDLFA--------AGVIALMVAISTLLNFIQEARSTKAADALKA 155
Query: 132 NLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA 185
++ VLR + W E LVPGD+I + GD++PAD R+L+ L + Q++
Sbjct: 156 MVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQAS 215
Query: 186 LTGESLPVTK----------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232
LTGESLPV K NP + F G+ G +AVVIATG +T+FG+ A V
Sbjct: 216 LTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV 275
Query: 233 DST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGG-- 289
++ FQ+ I ++ ++ +++M PV VLLI G
Sbjct: 276 SEQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV-------------VLLINGYT 314
Query: 290 ------------------IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 331
P +P +++ T+A G+ +LS+Q I KR+ AI+ MD+L
Sbjct: 315 KGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDIL 374
Query: 332 CSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARAS--RTENQDAIDAAIVGMLAD 389
C+DKTGTLT +K+ ++ + ++ G E V+ A S +T ++ +D A++ + +
Sbjct: 375 CTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDE 431
Query: 390 PKEARAGV--REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-------- 439
+++ +PF+ +R ++ ++ + KGA E+IL +C+
Sbjct: 432 ESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEI 491
Query: 440 --CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ---LVGLLPLFDPP 494
+ + +++ V D +GLR + VA + +P + + A L G + DPP
Sbjct: 492 VPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551
Query: 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554
+ +A ++ GV VK++TGD + + +G+ L+G D I L
Sbjct: 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEV----LIGSD----IETL 603
Query: 555 PVDEL---IEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611
DEL E+ FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIGI+V
Sbjct: 604 SDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD 663
Query: 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 650
A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 664 GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 8e-71
Identities = 188/728 (25%), Positives = 320/728 (43%), Gaps = 89/728 (12%)
Query: 25 EEVFEQLKCS-REGL--TSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVM--- 78
E + +LK EG+ +S R V+G N+L EK FL +W LS
Sbjct: 46 EGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLIL 102
Query: 79 -EAAAIMAIALA------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALM- 130
AA++++ L + W + V I+V +++ ++ + + L
Sbjct: 103 LSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNR 162
Query: 131 ANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGES 190
A K V+R G+ + +V GD++S+ GD+VPAD + G L+ID+S++TGES
Sbjct: 163 EKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGES 222
Query: 191 LPVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQVGHFQK 243
P+ K P + F SG+ +G +V A GV++F GK + DST +
Sbjct: 223 DPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSE 282
Query: 244 VLTAIGNF-CICSIAVGIVA---EIIIMYPVQHRKYRDGIDNLLVLLIGGIPI---AMPT 296
+ IG F ++ + +V + + R + L I + I A+P
Sbjct: 283 LAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPE 342
Query: 297 V--LSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352
L+VT+A+ ++ + + + + A E M +CSDKTGTLT N ++V + I
Sbjct: 343 GLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 402
Query: 353 VFAKGVEK------EHV--ILLAARA-------------------SRTENQDAIDAAIVG 385
V +HV IL+ + S+TE A+ +
Sbjct: 403 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTEC--ALLDFGLL 460
Query: 386 MLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALC----NC- 440
+L D +E RA + V PFN K ++ S G + KGA E +L C +
Sbjct: 461 LLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSN 520
Query: 441 ------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLF 491
+D + + VI+ A LR++ +A ++ + K+ P L+G++ +
Sbjct: 521 GEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIK 580
Query: 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551
DP R E ++ G+ V+M+TGD + K R G+ T + + S+
Sbjct: 581 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT---FGGLAMEGKEFRSL 637
Query: 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611
+D ++ K A P K +V L++ + +TGDG NDAPALK AD+G ++
Sbjct: 638 VYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMG 697
Query: 612 DA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY-----TIYAVSITIRIVVSV 665
+ T+ A+ ASDI+L + + I+ AV R ++ ++ + T+ V++ + V S
Sbjct: 698 ISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSC 757
Query: 666 PNILQKSP 673
I SP
Sbjct: 758 --ISSTSP 763
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 225 bits (577), Expect = 2e-64
Identities = 160/608 (26%), Positives = 246/608 (40%), Gaps = 98/608 (16%)
Query: 81 AAIMAIALANGGGRDPDWQDFVGIIVLLVINSTIS-FIEE---NNAGNAAAALMANLAPK 136
A I A A + P + + +++ L + ++E A A AL+ LAPK
Sbjct: 156 ATIGAYAYSLYATLFPVYFEEAAMLIFLF---LLGRYLEARAKGRARRAIRALLD-LAPK 211
Query: 137 T--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVT 194
T V DG E + GD++ ++ G+ +P D ++ G +D+S LTGESLPV
Sbjct: 212 TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVE 270
Query: 195 KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFC 252
K P DEVF+G+ G + V G T + LV ++ + Q++ + F
Sbjct: 271 KKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFV 330
Query: 253 ICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLS 310
+ + + + + + L +L+ P A+ L+ AI G R +
Sbjct: 331 PVVLVIAALT-FALWPLFGGGDWETALYRALAVLVIACPCAL--GLATPTAILVGIGRAA 387
Query: 311 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 370
++G + K A+E +A +D + DKTGTLT K V +V A +++ ++ LAA
Sbjct: 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELLALAAAL 443
Query: 371 SRTENQ---DAI-DAAIVGMLADPKEARA----GVREVHFLPFNPVDKRTALTYIDSDGN 422
+ AI AA L D ++ GV VD L
Sbjct: 444 EQHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAE-------VDGERVL-------- 488
Query: 423 WHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
G L D+ + I+ G + VA
Sbjct: 489 -----VGNAR---LLGEEGIDL-PLLSERIEALESEGKTVVFVAVDG------------- 526
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+LVG++ L D R D+ E I LG+ V M+TGD + + LG
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG----------- 575
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+DE+ A + PE K EIV+ LQ M GDG+NDAPAL
Sbjct: 576 -------------IDEV------RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALA 616
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRI 661
AD+GIA+ TD A A+D+VL LS + A+ SRA + +K N I I
Sbjct: 617 AADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676
Query: 662 VVSVPNIL 669
++ +L
Sbjct: 677 PLAAGGLL 684
|
Length = 713 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 219 bits (559), Expect = 1e-60
Identities = 189/785 (24%), Positives = 338/785 (43%), Gaps = 144/785 (18%)
Query: 9 LEEIKNE-SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEEKKES-KVLK 65
L+E+K E +D ++ ++E+ + GL++ A L GPN L + + +K
Sbjct: 6 LDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVK 65
Query: 66 FLGFMWNPLSWVMEAAAIMA-IALANGGGRDPDWQD---FVGII--VLLVINSTISFIEE 119
F ++ S ++ AI+ +A + + Q+ ++G++ +++I S+ +E
Sbjct: 66 FCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQE 125
Query: 120 NNAGNAAAALMANLAPKTK-VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP 178
+ + N+ P+ V+RDG +A +V GD++ +K GD +PAD R++
Sbjct: 126 AKSSKIMESF-KNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 179 LKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHTFFGKA 228
K+D S+LTGES P T+ NP + F + C +G +V+ TG T G+
Sbjct: 185 CKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244
Query: 229 AHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGID 280
A L ++ HF ++T + F S + +I+ Y + + +
Sbjct: 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGY-----TWLEAVI 296
Query: 281 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 297 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 341 LNKLTV-----DRNLIE----------VFAKGVEK----EHVILLAARASRTENQDAI-- 379
N++TV D + E F K + L RA Q+ +
Sbjct: 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPI 416
Query: 380 -------DAAIVGML-------ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHR 425
DA+ +L E R +V +PFN +K + + D R
Sbjct: 417 LKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPR 476
Query: 426 ---ASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472
KGAPE+IL C+ E++++ + G R LG +P+
Sbjct: 477 HLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPD 536
Query: 473 K---------TKES--PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 521
+ T + P VGL+ + DPPR + + + + G+ V M+TGD
Sbjct: 537 EQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 596
Query: 522 IGKETGRRLGMGTNMYPSSSLLGQDKDASIAA---LPVDELIEKADG------------- 565
K + +G+ + G + IAA +PV ++ +
Sbjct: 597 TAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648
Query: 566 ---------------FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+
Sbjct: 649 SEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708
Query: 611 ADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS-----IT---IRI 661
A +D ++ A+D++L + + I++ V R IF +K Y ++ IT I I
Sbjct: 709 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFI 768
Query: 662 VVSVP 666
+ ++P
Sbjct: 769 IANIP 773
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 209 bits (533), Expect = 2e-59
Identities = 141/578 (24%), Positives = 237/578 (41%), Gaps = 82/578 (14%)
Query: 106 VLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPGDVISI 161
+LL + +EE G A+ AL + LAP T + DG E L GD++ +
Sbjct: 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIV 82
Query: 162 KLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
+ G+ +P D ++ G+ +D+SALTGES+PV K DEVF+G+ G + V G
Sbjct: 83 RPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGE 141
Query: 222 HTFFGKAAHLV-DSTNQVGHFQKVLTAI-GNFCICSIAVGIVAEIIIMYPVQHRKYRDGI 279
+ + LV ++ + Q++ I + +A+ ++ ++ + +
Sbjct: 142 DSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLT-FVVWLAL---GALGAL 197
Query: 280 DNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 337
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKTG
Sbjct: 198 YRALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTG 255
Query: 338 TLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGV 397
TLT K TV IE E +L A A + + AIV
Sbjct: 256 TLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV----------RYA 303
Query: 398 REVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA----LCNCREDVRKKVHAVID 453
++ D + + G A+ E++ + +++
Sbjct: 304 KKRGLELPKQED----VEEVPGKG--VEATVDGGEEVRIGNPRFLELAIEPISASPDLLN 357
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV 512
+ +G + VA +L+G++ L D R ++ E I G +
Sbjct: 358 EGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404
Query: 513 KMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572
M+TGD + + LG +DE+ A + PE
Sbjct: 405 VMLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPE 434
Query: 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632
K IVK LQE + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS
Sbjct: 435 DKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSS 494
Query: 633 IISAVLTSRAIFQRMK-NYTIYAVSITIRIVVSVPNIL 669
+ +A+ SR + +K N + I ++ +L
Sbjct: 495 LPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLL 532
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 8e-59
Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIK 162
I++L++IN+ + +E A A AL L P V+RDG+ E A LV GD++ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 163 LGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVH 222
GD VPAD R++EG L++D+SALTGESLPV K+ D VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 223 TFFGKAAHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDN 281
T GK A LV+ Q++L + + I + + + +++ + + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 282 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 199 bits (507), Expect = 1e-55
Identities = 148/589 (25%), Positives = 242/589 (41%), Gaps = 93/589 (15%)
Query: 101 FVGIIVLLVINSTISFIEENNAGNAAAAL--MANLAPKT--KVLRDGRWSEQDASILVPG 156
F +L+ ++E G A+ AL +A L P T + DG E +L PG
Sbjct: 54 FDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPG 113
Query: 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVV 216
D++ + G+ +P D ++EG+ ++D+S +TGESLPV K D V +G+ G +
Sbjct: 114 DIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRA 172
Query: 217 IATGVHTFFGKAAHLVD----STNQVGHFQKVLTAIGNFCICSIAV-GIVAEIIIMYPVQ 271
ATG T + LV S + + + +IA+ V +I+
Sbjct: 173 TATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFV 232
Query: 272 HRKYRDGIDNLLVLLIG---GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328
+ VL+I + +A PTV+ A+ + ++ G + K A+E A +
Sbjct: 233 FALEV----AVTVLIIACPCALGLATPTVI----AVATGLAAKNGVLIKDGDALERAANI 284
Query: 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLA 388
D + DKTGTLT K TV + VF + E + L AA + +E+ + AIV
Sbjct: 285 DTVVFDKTGTLTQGKPTV--TDVHVFGESDRDELLALAAALEAGSEH--PLAKAIV---- 336
Query: 389 DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKV 448
+ + D + + I +G + L N + +
Sbjct: 337 ------SYAKAKGITLSQVSDFKA-IPGIGVEGTVE-------GHTIQLGNEKLLGENGL 382
Query: 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNL 508
+ G S+ VA +L G+L L D + ++ E I+
Sbjct: 383 KTDGEVEEGGGTTSVLVAVNG-------------ELAGVLALADQLKPEAKEVIQALKRR 429
Query: 509 GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568
G+ M+TGD K + LG IE + A
Sbjct: 430 GIEPVMLTGDNRKTAKAVAKELG----------------------------IE--NVRAE 459
Query: 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628
V P+ K ++K+LQE+ + M GDG+NDAPAL +AD+GIA+ TD A A+D+VL
Sbjct: 460 VLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRN 519
Query: 629 GLSVIISAVLTSRAIFQRMKN-------YTIYAVSITIRIVVSVPNILQ 670
L+ + +A+ SR +R+K Y + A+ I ++ +L
Sbjct: 520 DLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPAGILLS 568
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 2e-50
Identities = 161/606 (26%), Positives = 250/606 (41%), Gaps = 114/606 (18%)
Query: 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
M AA+ A+A+ ++ + +++L I T+ A A ALM LAP T
Sbjct: 5 MALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDT 56
Query: 138 -KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
+VLR G E L GDV+ +K G+ VP D +L G +D+SALTGES+PV K
Sbjct: 57 ARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKA 115
Query: 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQVGHFQKVLTAIGNFCICS 255
P DEVF+G+ G + VV + K +LV ++ ++ Q+ + +
Sbjct: 116 PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPV 175
Query: 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQG 313
+ +A ++ ++ ++ + LVLL+ P A+ V+S A ++ G
Sbjct: 176 VLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCAL--VISAPAAYLSAISAAARHG 231
Query: 314 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDR-NLIEVF--AKGVEK--EHVILLAA 368
+ K A+E +A + + DKTGTLT + V EV A E+ H + A
Sbjct: 232 ILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAI 291
Query: 369 RASRTENQDAID-AAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
+ ++ + G GVR V VD I + + A
Sbjct: 292 VDYARKRENVESVEEVPGE---------GVRAV-------VDGGEV--RIGNPRSLEAAV 333
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
PE VH D +G
Sbjct: 334 GARPESAGKTI---------VHVARDG----------------------------TYLGY 356
Query: 488 LPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD 546
+ L D PR D+AE I LG+ V M+TGD+ A+ + R LG
Sbjct: 357 ILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG--------------- 401
Query: 547 KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606
+DE+ A + PE K EIVK L+E+ M GDG+NDAPAL AD+
Sbjct: 402 ---------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADV 446
Query: 607 GIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK-NYTIYAVSITIRIVVS 664
GIA+ A +D A +D+VL LS + A+ +R + +K N I ++ I +++
Sbjct: 447 GIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVI---ALGIILLLI 503
Query: 665 VPNILQ 670
+ +
Sbjct: 504 LLALFG 509
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 2e-41
Identities = 88/272 (32%), Positives = 131/272 (48%), Gaps = 43/272 (15%)
Query: 427 SKGAPEQILALCN-----------CREDVRKKVHAVIDKFAER-GLRSLGVARQEIPEKT 474
KGAPE +L C + ++ + +VI + LR L +A ++IP+
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 475 KESPGAPWQ----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 524
+E + +G++ + DPPR + A+ I + G+ V MITGD +
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 525 ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-----------FAGVFPEH 573
RR+G + D+D + + E E F+ V P H
Sbjct: 569 AICRRIG----------IFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E+V+ LQE+ I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + I
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATI 678
Query: 634 ISAVLTSRAIFQRMKNYTIYAVSITIRIVVSV 665
++AV RAI+ MK + Y +S I VV +
Sbjct: 679 VAAVEEGRAIYNNMKQFIRYMISSNIGEVVCI 710
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 8e-37
Identities = 155/785 (19%), Positives = 267/785 (34%), Gaps = 202/785 (25%)
Query: 36 EGLTSDEGAHRLHVFGPNKLEEKKES--KVLK------FLGF------MWNPLSWVMEAA 81
GLT+ + A R +G N++E S ++LK F F +W + +
Sbjct: 138 NGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLDEYYYYSL 197
Query: 82 AIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR 141
I+ ++ I L V + + +++ V+R
Sbjct: 198 CIVFMS--------------STSISLSVYQIRKQMQRLRDMVHKPQSVI--------VIR 235
Query: 142 DGRWSEQDASILVPGDVISIKL--GDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD 199
+G+W + LVPGD++SI +P D+ LL G + +++S LTGES+PV K P
Sbjct: 236 NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKFPIP 294
Query: 200 E------------------VFSG-------STCKQGEIEAVVIATGVHTFFGKAAHLVDS 234
+ +F G A+V+ TG T G+ LV S
Sbjct: 295 DNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---LVRS 351
Query: 235 ------TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIG 288
+ + + I +I + + +L ++ I
Sbjct: 352 ILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRP--LGKIILRSLDIITI- 408
Query: 289 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL---- 344
+P A+P LS+ + RL ++G I +DV C DKTGTLT + L
Sbjct: 409 VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRG 468
Query: 345 -------------------TVDRNLIEVFA-------------------KGVEKEHVILL 366
+ A K E L
Sbjct: 469 VQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLE 528
Query: 367 AARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA-LTYIDSDGNWHR 425
S + + D + + F+ +R + + + + +
Sbjct: 529 EDDESAEPTS-----ILAVVRTDDPPQELSI--IRRFQFSSALQRMSVIVSTNDERSPDA 581
Query: 426 ASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT--------KES 477
KGAPE I +LC+ E V V+ + G R L +A +E+P+ T +++
Sbjct: 582 FVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640
Query: 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY 537
+ +G + +P + D+ E I+ + MITGD R G+ +
Sbjct: 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI---VN 697
Query: 538 PSSSLL-------GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
PS++L+ K I +D + + +P + + L R H+ M
Sbjct: 698 PSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLA-M 756
Query: 591 TGD--------------------------------------------------GVNDAPA 600
+G G ND A
Sbjct: 757 SGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGA 816
Query: 601 LKKADIGIAV--ADATDAARSASDIVLTEPGLSVII---SAVLTSRAIFQRMKNYT-IYA 654
LK+AD+GI++ A+A+ AA S + +VI A++TS +F+ M Y+ I
Sbjct: 817 LKQADVGISLSEAEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQF 876
Query: 655 VSITI 659
S++I
Sbjct: 877 YSVSI 881
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 2e-35
Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 32/303 (10%)
Query: 80 AAAIMAIALANGGGRDPDWQDFVG---IIVLLVINSTISFIEENNAGNAAAALMANLAPK 136
AA ++ LA + FV I+++LV N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
KVLRDGRWS A LVPGD++ + +GD VPAD R+L L++DQS LTGES+ V K+
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 197 ----PYDE---------VFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQ 242
P + +FSG+ G+ VV+ TG+ T GK + + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 243 KVLTAIGNFC------ICSIAVGIVAEIIIMYPV-QHRKYRDGIDNLLV---LLIGGIPI 292
K L G IC I V ++ P + I + L + IP
Sbjct: 195 KKLDEFGELLSKVIGLIC-ILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPE 253
Query: 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V +
Sbjct: 254 GLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV----CK 309
Query: 353 VFA 355
V A
Sbjct: 310 VVA 312
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 8e-34
Identities = 102/371 (27%), Positives = 166/371 (44%), Gaps = 62/371 (16%)
Query: 36 EGLTSDEGAHRLHVFGPNKLEEKKESKVLK-FLGFMWNPLSWVMEAAAIMAIALANGGGR 94
EGLT DE HRL G N+LE L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 95 DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILV 154
DW + I ++ +N I FI+E A +L +P V+R+G+ D+ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY------DEV------- 201
PGD+ +K GD +PAD RL+E D++ LTGESLPV K+ + ++
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 202 --FSGSTCKQGEIEAVVIATGVHTFFGKAA---------------------------HLV 232
FS S +G + + IAT +++ G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 233 DSTNQVGHF---------QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLL 283
+ G F + L+ + C + I+ II+M + ++ +
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAIYAI 314
Query: 284 VLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 343
L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+T K
Sbjct: 315 CLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGK 374
Query: 344 LTVDRNLIEVF 354
+ + I F
Sbjct: 375 MIARQIWIPRF 385
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 5e-33
Identities = 129/506 (25%), Positives = 212/506 (41%), Gaps = 84/506 (16%)
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
+ DG A+ L GD++ ++ G+I+P+D ++EG +D+SA+TGES PV +
Sbjct: 108 LLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 198 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCIC 254
+ V G+ ++ + A TF + LV+ + QK I I
Sbjct: 167 GGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER----QKTPNEIALT-IL 221
Query: 255 SIAVGIVAEIII--MYPVQHRKYRDG----IDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308
+ ++ + + +YP Y G + L+ LL+ IP + +LS G R
Sbjct: 222 LSGLTLIFLLAVATLYPFAI--YSGGGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDR 279
Query: 309 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFAKGVEKEHVILLA 367
++Q I A+E +D L DKTGT+TL N+ + I V GV +E + A
Sbjct: 280 VTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE--FIPV--PGVSEEELADAA 335
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVH----FLPFNPVDKRTALTYIDSDGNW 423
AS ++ +IV LA ++ F+PF +T ++ +D G
Sbjct: 336 QLAS-LADETPEGRSIV-ELAKKLGIELREDDLQSHAEFVPFT---AQTRMSGVDLPGG- 389
Query: 424 HRASKGAPEQILALCNCRE-DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPW 482
KGA + I R + + + A +D+ + G L V
Sbjct: 390 REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------------- 436
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYP 538
+++G++ L D + E +G+ MITGD AI E G
Sbjct: 437 RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG----------- 485
Query: 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598
VD+ I +A PE K ++++ Q + MTGDG NDA
Sbjct: 486 -----------------VDDFIAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDA 522
Query: 599 PALKKADIGIAVADATDAARSASDIV 624
PAL +AD+G+A+ T AA+ A+++V
Sbjct: 523 PALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 1e-30
Identities = 92/344 (26%), Positives = 151/344 (43%), Gaps = 52/344 (15%)
Query: 351 IEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDK 410
I VFAK + H L N++ + + E PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE---FPFDSEIK 538
Query: 411 RTALTYIDSDGNWHRA-SKGAPEQILALCNC----------------REDVRKKVHAVID 453
R A Y D+ G + +KGA E+I+ C+ RE + + ++
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESL-- 596
Query: 454 KFAERGLRSLGVARQEI---------------PEKTKESPGAPWQLVGLLPLFDPPRHDS 498
A GLR L A + T ES + +GL+ ++DPPR++S
Sbjct: 597 --AAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNES 651
Query: 499 AETIRRALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSSS-------LLGQDKDAS 550
A + + G+NV M+TGD K + +G + N + G DA
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA- 710
Query: 551 IAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610
++ VD+L A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 711 LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 611 A-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653
+ +D A+ ASDIVL++ + I++A+ R +F + + ++
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLH 814
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 1e-28
Identities = 152/528 (28%), Positives = 227/528 (42%), Gaps = 91/528 (17%)
Query: 128 ALMANLAPKTKV-LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 186
ALMA L P+T LRDG E + L PGDVI + G +PAD +LL D+SAL
Sbjct: 236 ALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293
Query: 187 TGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ--------V 238
TGES+PV + ++V +G+T + V++ + + HL++ + +
Sbjct: 294 TGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFI 353
Query: 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVL 298
F ++ T + ++ V +V ++ P Q YR L +LLI G P A+ V+
Sbjct: 354 DRFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VI 404
Query: 299 SVTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK 356
S AI S +++GA+ K A+E++ + + DKTGTLT K V I
Sbjct: 405 STPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTD--IHPAT- 461
Query: 357 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL-- 414
G+ + ++ LAA A++ LA A VR L + + AL
Sbjct: 462 GISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAG 509
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474
+ I+ N R AP K+ + D FA + + E KT
Sbjct: 510 SGIEGQVNGERVLICAPG--------------KLPPLADAFAGQ------INELESAGKT 549
Query: 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534
++GL+ L D R D+ + I LG+ M+TGD
Sbjct: 550 VVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN--------------- 594
Query: 535 NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594
P ++ A+IA EL D AG+ PE K + V L + + M GDG
Sbjct: 595 ---PRAA-------AAIAG----EL--GIDFRAGLLPEDKVKAVTELNQHAPL-AMVGDG 637
Query: 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 642
+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 638 INDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (298), Expect = 8e-28
Identities = 129/602 (21%), Positives = 251/602 (41%), Gaps = 76/602 (12%)
Query: 72 NPLSWVMEAAAIMAIALA--------NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123
NP+ +V+E ++A+ L R + F+ +++ LV + + E
Sbjct: 32 NPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGK 91
Query: 124 NAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKI 181
A AL ++ +DG + DAS L G ++ + G+ +P D ++++G +
Sbjct: 92 AQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATV 150
Query: 182 DQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 238
D+SA+TGES PV K +D V G++ +E + + H+F K LV+ +
Sbjct: 151 DESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATR- 209
Query: 239 GHFQKVLTAIGNFCIC-SIAVGIVAEIIIMYPV-QHRKYRDGIDNLLVLLIGGIPIAMPT 296
+K I F + ++ + + I+ MYP+ + + I L+ L + IP +
Sbjct: 210 ---KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGG 266
Query: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLIEVFA 355
+LS G R++Q + K ++E ++VL DKTGT+T N++ I V +
Sbjct: 267 LLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA--FIPVKS 324
Query: 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415
E+ L+ A + D + + LA + ++PF + + +
Sbjct: 325 SSFER----LVKAAYESSIADDTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVK 380
Query: 416 YIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT 474
+ + KGAP ++ + + + A++ +++G L V
Sbjct: 381 FTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNE---- 431
Query: 475 KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534
++G++ L D + E R +G+ M TGD + G
Sbjct: 432 ---------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG--- 479
Query: 535 NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594
VD + + PE K +++ Q + HI MTGDG
Sbjct: 480 ---------------------VDRFVAECK------PEDKINVIREEQAKGHIVAMTGDG 512
Query: 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654
NDAPAL +A++G+A+ T +A+ A++++ + + ++ VL + + + T ++
Sbjct: 513 TNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFS 572
Query: 655 VS 656
++
Sbjct: 573 IA 574
|
Length = 673 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 1e-26
Identities = 139/581 (23%), Positives = 233/581 (40%), Gaps = 89/581 (15%)
Query: 70 MWNPLSWVMEAAAIM----AIALANGGGRDPDWQDFVGII--VLLVINSTISFIEENNAG 123
NP+ +++ +++ IA A+ G + F II +L + +F E G
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 124 NAAAALMANLAPKTK-------VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176
A A+ TK + DG + A L GD++ ++ GD++P D ++EG
Sbjct: 90 RGKA--QADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG 147
Query: 177 DPLKIDQSALTGESLPVTKNP---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233
+D+SA+TGES PV K + V G+ + A TF + LV+
Sbjct: 148 VA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVE 206
Query: 234 STNQVGHFQKVLTAIG-NFCICSIAVGIVAEIIIMYPVQHRKYRD---GIDNLLVLLIGG 289
+ +K I + ++ + + ++P Y + L+ LL+
Sbjct: 207 GAQR----RKTPNEIALTILLIALTLVFLLVTATLWPFAA--YGGNAISVTVLVALLVCL 260
Query: 290 IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDR 348
IP + +LS G R+ I A+E +D L DKTGT+TL N+L +
Sbjct: 261 IPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF 320
Query: 349 NLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408
+ A+GV+++ + A AS + D + + +LA R + F
Sbjct: 321 ----IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEF 374
Query: 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDV-RKKVHAVIDKFAERGLRSLGVAR 467
+T ++ I+ D N KGA + I + +D+ A +G L V
Sbjct: 375 TAQTRMSGINLD-NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE 433
Query: 468 QEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIG 523
++ G++ L D + E + +G+ MITGD AI
Sbjct: 434 DN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480
Query: 524 KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE 583
E G VD+ I +A PE K ++++ Q
Sbjct: 481 AEAG----------------------------VDDFIAEAT------PEDKIALIRQEQA 506
Query: 584 RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 507 EGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-26
Identities = 134/537 (24%), Positives = 207/537 (38%), Gaps = 148/537 (27%)
Query: 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNP 197
K+ G E A+ L GD++ ++ G+I+PAD ++EG +D+SA+TGES PV +
Sbjct: 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRES 166
Query: 198 ---YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK----------- 243
+ V G+ I + A +F + LV+ + QK
Sbjct: 167 GGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKR----QKTPNEIALTILL 222
Query: 244 -VLTAIGNFCIC-------SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP 295
LT I F + + G I + L+ LL+ IP +
Sbjct: 223 AGLTII--FLLVVATLPPFAAYSGGALSITV---------------LVALLVCLIPTTIG 265
Query: 296 TVLSVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDRNLI 351
+LS AIG R+ Q I A+E +D L DKTGT+TL N+ +
Sbjct: 266 GLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE---- 318
Query: 352 EVF--AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADP-----------------KE 392
F GV +E + DAA + LAD +E
Sbjct: 319 --FLPVPGVTEE---------------ELADAAQLSSLADETPEGRSIVVLAKQRFNLRE 361
Query: 393 ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAV 451
F+PF+ +T ++ +D DG KGA + I ++ A
Sbjct: 362 RDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRRYVESNGGHFPAELDAA 416
Query: 452 IDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN 511
+D+ A +G L VA +++G++ L D + E +G+
Sbjct: 417 VDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIK 463
Query: 512 VKMITGD-QL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567
MITGD L AI E G VD+ + +A
Sbjct: 464 TVMITGDNPLTAAAIAAEAG----------------------------VDDFLAEAT--- 492
Query: 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
PE K ++++ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A ++V
Sbjct: 493 ---PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 9e-19
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYP 538
+ LL + DP R DS ++R G + M+TGD AI KE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 539 SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598
+DE+I AGV P+ K E +KRLQ + M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 599 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 3e-18
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 16 SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEE-KKESKVLKFLGFMWNP 73
+D + +EEV E+L+ E GL+S+E A RL +GPN+L KK S +L+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 74 LSWVMEAAAIMAIAL 88
L +++ AAA+++ L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 6e-14
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 21 RIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVM 78
+ +EEV +L E GLT E RL +GPN+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 79 EAAAIMA 85
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 3e-08
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 155 PGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEA 214
PG ++ + GD VP D + +G+ +D++ LTGE +P K D V +G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 215 VVIATGVHTFFGKAAHLV----DSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMY-- 268
A G HT + +V S ++G ++A+ F + + +V+ I +
Sbjct: 402 RASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV--FVPVVVVIALVSAAIWYFFG 459
Query: 269 PVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAIEE 324
P Y LV+ + IA P L + M+I G R ++ G + + A++
Sbjct: 460 PAPQIVYT------LVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQR 513
Query: 325 MAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAA 368
+ +D L DKTGTLT K V ++ F GV++ + LAA
Sbjct: 514 ASTLDTLVFDKTGTLTEGKPQVVA--VKTFN-GVDEAQALRLAA 554
|
Length = 834 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 3e-07
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 19/123 (15%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
++GL+ L DP + E ++ G+ + ++TGD R LG+ +
Sbjct: 84 VVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALV----- 138
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
P ++ E A ++ L + M GDGVND PA K
Sbjct: 139 SADLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAK 184
Query: 603 KAD 605
A
Sbjct: 185 AAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 4e-07
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 546 DKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605
D+ S+ L I FAG PE K +I++ L++R M G+G ND AL++AD
Sbjct: 54 DRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREAD 113
Query: 606 IGIAV---ADATDAARSASDIVLTEPGLSVIISA 636
+GI + +D+VL E + +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Query: 557 DELIEKADGFAG------VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADI 606
+ L + G V +K + + L ++ I GDG ND +K A +
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189
Query: 607 GIAVADATDAARSASDIVLTEPGLSVIIS 635
GIA +A + +DI + + L+ I+
Sbjct: 190 GIAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 38/166 (22%)
Query: 401 HFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA-LCNCREDVRKKVHAVIDKFAERG 459
+ L FN KR ++ + DG KGA I L + V ++ ++ +A G
Sbjct: 513 NVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEG 572
Query: 460 LRSLGVARQEIPEKTKESPGAPWQ-----------------------------LVGLLPL 490
LR+L +A +E+ E+ E W L+G +
Sbjct: 573 LRTLCIAYRELSEEEYEE----WNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAI 628
Query: 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 536
D + ETI G+ + ++TGD++ ET +G +
Sbjct: 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKV----ETAINIGYSCRL 670
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.003
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHICG---MT-GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K +K L + I + GDG ND L+ A +G+A+ +A+ ++A+D V
Sbjct: 186 SKGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K ++ L E I GDG+ND L+ A G+A+ +A + ++ +D V
Sbjct: 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.004
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 377 DAIDAAIVG----MLADPKEARAGVREVHFLPFNPVDKR-TALTYIDSDGNWHRASKGAP 431
D ++A++ + D +E RA V +PFN KR + + ++ D + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 432 EQILALCN 439
E+IL C+
Sbjct: 82 ERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 675 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.64 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.38 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.08 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.05 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.05 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.03 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.02 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.02 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.02 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.01 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.98 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.94 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.92 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.9 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.87 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.86 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.83 | |
| PLN02887 | 580 | hydrolase family protein | 98.82 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.79 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.75 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.73 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.69 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 98.68 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.68 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.66 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.63 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.61 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.48 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.47 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.44 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.42 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.34 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.28 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.23 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.2 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.17 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.1 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.1 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.06 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.03 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.03 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.88 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.86 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.86 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.8 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.78 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.78 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.77 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.71 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.66 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.61 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.6 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.59 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.58 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.57 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.53 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.52 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.44 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.41 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.36 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.3 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.29 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.2 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.2 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.18 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.16 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.16 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.11 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.1 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.09 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.0 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.0 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.99 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.92 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.89 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.88 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.85 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.82 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.82 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.79 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.79 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.77 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.74 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.61 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.6 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.54 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.51 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.47 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.44 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.4 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.4 | |
| PLN02940 | 382 | riboflavin kinase | 96.38 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.36 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.3 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.28 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.07 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.04 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.89 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.74 | |
| PLN02811 | 220 | hydrolase | 95.73 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.65 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.6 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.95 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.87 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 94.86 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.79 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.78 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.59 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.5 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.46 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 94.44 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.44 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.05 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.99 | |
| PLN03017 | 366 | trehalose-phosphatase | 93.66 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 93.66 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 93.52 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 93.27 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 93.17 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 93.12 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 92.94 | |
| PLN02580 | 384 | trehalose-phosphatase | 92.49 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.28 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 91.59 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 91.38 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 90.88 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 90.81 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 89.68 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 89.27 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 88.32 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 87.64 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 87.62 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 87.07 | |
| PLN02423 | 245 | phosphomannomutase | 83.82 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 83.69 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 82.32 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 81.32 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 80.8 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 80.63 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 80.08 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-116 Score=933.05 Aligned_cols=645 Identities=32% Similarity=0.493 Sum_probs=552.1
Q ss_pred CccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005830 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 95 (675)
..|..+.+|++.+|.++ .+|||.+|+.+|+++||+|+++... .+.|+.+++||.+|+..++++++++||++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 35778999999999999 8899999999999999999999876 778999999999999999999999999986
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe
Q 005830 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (675)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~ 175 (675)
.|.+++.|.++++++..+.++||||+++++++|+++.|+.++|+|+|+.+.+++++|||||||.++-||+||||.++++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 6778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEeeccccCCCcccccCC--------------CCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCc
Q 005830 176 GDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (675)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~ 240 (675)
..++.||||+|||||.|+.|.. .|++|+||.+..|.+.++|+.||.+|.+|++.+.++..+ +++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999953 267999999999999999999999999999999888775 6899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc-------cccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhh
Q 005830 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV-------QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (675)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~ 311 (675)
+|+.++.++..+.-++.+.++..+++ .|+. +...+.+.+..++++.+++||++||..++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988653333333332322 2321 11345567778899999999999999999999999999999
Q ss_pred cCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccC-----------C------------------CcH-
Q 005830 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG-----------V------------------EKE- 361 (675)
Q Consensus 312 ~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-----------~------------------~~~- 361 (675)
+++++|...++|+||.+++||+|||||||+|+|.+.++++...... + ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 9999999999999999999999999999999999998775321100 0 111
Q ss_pred --HHHHHHHHHccc-----c------CcChHHHHHHhhcC-----ChH---H-----------HhcCCcEEEEecCCccC
Q 005830 362 --HVILLAARASRT-----E------NQDAIDAAIVGMLA-----DPK---E-----------ARAGVREVHFLPFNPVD 409 (675)
Q Consensus 362 --~~l~~~~~~~~~-----~------~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~~f~~~~ 409 (675)
+++..++.|... . .+.|.+.|+...+. +.. . ....++....+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 223333322211 1 34677888765431 111 0 11223455889999999
Q ss_pred cceEEEEEcCCCc--EEEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCc--
Q 005830 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-- 473 (675)
Q Consensus 410 k~~sv~~~~~~g~--~~~~~kGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-- 473 (675)
|+|++.+.+..++ +.+|.|||+|.|+++|+. ++..++.+.+...+|+++|+|++++|+++.+..
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876664 789999999999999952 345678899999999999999999999977641
Q ss_pred ---------CCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC-Ccc
Q 005830 474 ---------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS-SLL 543 (675)
Q Consensus 474 ---------~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~ 543 (675)
.+...|.+|+|+|++++.||+|++++++|+.|+++||+|+|+|||+..||.++|+++|+.....+.. ...
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 2456789999999999999999999999999999999999999999999999999999976543221 223
Q ss_pred CCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhccC
Q 005830 544 GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASD 622 (675)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad 622 (675)
.+.+.+.++..+++....+..+|+|++|.+|.++|+.||++|++|+|+|||.||+||||.|||||||| +|+++||+|||
T Consensus 636 TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 636 TGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred chhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 34455678888889999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 005830 623 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNIL 669 (675)
Q Consensus 623 ~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 669 (675)
+||.||||++|+.++++||.+|+|||+++.|.++.|+..+.+.++..
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~a 762 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTA 762 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999866665443
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-114 Score=987.20 Aligned_cols=620 Identities=60% Similarity=0.946 Sum_probs=554.6
Q ss_pred CCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 005830 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (675)
Q Consensus 37 GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (675)
|||++|+++|+++||+|+++.++++.|+.|+++|++|++|+++++++++++++ .|.++++++++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999877888999999999999999999999999875 78899999999999999999
Q ss_pred HHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccC
Q 005830 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (675)
Q Consensus 117 ~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~ 196 (675)
++++++++.+++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999966999999999999999999
Q ss_pred CCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 005830 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (675)
Q Consensus 197 ~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (675)
+||.+|+||.+.+|++.++|++||.+|.+|++.+++++.+ +++++++.+++++.+++.++++.+++.++++++....+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998775 567999999999988766555544444444444356788
Q ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecc
Q 005830 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (675)
Q Consensus 276 ~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~ 355 (675)
..++..++++++++|||+||++++++++.++.+|+|+|+++|+++++|+||.+|++|||||||||+|+|++.+++.. .
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~--~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPF--F 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEec--C
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999987642 2
Q ss_pred cCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEEEEcCC-CcEEEEEcCcHHHH
Q 005830 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (675)
Q Consensus 356 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~-g~~~~~~kGa~e~i 434 (675)
.+.+.++++.+++.++....+||++.|+++++.+....+..++..+.+||++.+|+|++++.+.+ |+.++++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 22566778888776665556699999999987655444556788899999999999998887654 77888999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEE
Q 005830 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (675)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~ 514 (675)
+++|+...+.++++.+.+++++.+|+|++++|+++ .|.+|+|+|+++|+||+||+++++|++||++||+++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888889999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCC
Q 005830 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (675)
Q Consensus 515 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg 594 (675)
+|||++.+|.++|+++||..+......+........++++++++.+++..+|||++|+||.++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999975433222233333334566778999999999999999999999999999999999999999
Q ss_pred ccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 595 ~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
.||+|||++|||||||++|+|+|+++||+|+++++|+.|++++++||++|+|++||+.|.++.|+..++.+++..++.|
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999987766655444444
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-113 Score=990.53 Aligned_cols=640 Identities=30% Similarity=0.462 Sum_probs=560.2
Q ss_pred ccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCc
Q 005830 19 LERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPD 97 (675)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 97 (675)
.+..+.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++ .
T Consensus 49 ~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-------~ 121 (902)
T PRK10517 49 AAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-------D 121 (902)
T ss_pred HHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------c
Confidence 457899999999999988999999999999999999998875 57889999999999999999999999864 7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEEC------CeEEEEEcCCccCCcEEEecCCCeeeeeE
Q 005830 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPADA 171 (675)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiv~l~~G~~iPaD~ 171 (675)
|.++++|+++++++.++++++++|+++++++|++..+++++|+|| |++++|++++|+|||+|.|++||+|||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg 201 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADL 201 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeE
Confidence 889999999999999999999999999999999999999999999 78999999999999999999999999999
Q ss_pred EEEecCCeeEeeccccCCCcccccCCCC-------------ccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-CC
Q 005830 172 RLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 237 (675)
Q Consensus 172 ~vl~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~-~~ 237 (675)
+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++.+. .+
T Consensus 202 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~ 281 (902)
T PRK10517 202 RILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSE 281 (902)
T ss_pred EEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCC
Confidence 9999977899999999999999998874 799999999999999999999999999999998776 46
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccc
Q 005830 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (675)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk 317 (675)
++++++.+++++++++.+.++.+.+.+++.+ ....+|..++..++++++++|||+||++++++++.++.+|+++|+++|
T Consensus 282 ~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~-~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk 360 (902)
T PRK10517 282 PNAFQQGISRVSWLLIRFMLVMAPVVLLING-YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK 360 (902)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 7999999999988765444443333233322 234578889999999999999999999999999999999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccc--cCcChHHHHHHhhcCCh--HHH
Q 005830 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KEA 393 (675)
Q Consensus 318 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 393 (675)
+++++|++|++|++|||||||||+|+|++.+... ..+.+.++++..++.++.. ..+||++.|++.++... ...
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~ 437 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSL 437 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999987531 1233456677766654432 23599999998876432 223
Q ss_pred hcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEE
Q 005830 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (675)
Q Consensus 394 ~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 463 (675)
...++.++.+||++.+|+|++++.+.++.+.+++||+||.++++|+. +++.++.+.+..++++++|+|++
T Consensus 438 ~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 517 (902)
T PRK10517 438 ASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVV 517 (902)
T ss_pred hhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 44677889999999999999988776777889999999999999963 22345667778889999999999
Q ss_pred EEEeeccCCcCCC---CCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC
Q 005830 464 GVARQEIPEKTKE---SPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (675)
Q Consensus 464 ~~a~~~~~~~~~~---~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 540 (675)
++||++++..+.+ ..|++++|+|+++|+||+||+++++|++|+++||+++|+|||++.||.++|+++||.. ..
T Consensus 518 avA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~ 593 (902)
T PRK10517 518 AVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GE 593 (902)
T ss_pred EEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cC
Confidence 9999987653321 2378999999999999999999999999999999999999999999999999999952 22
Q ss_pred CccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhc
Q 005830 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (675)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ 620 (675)
.+.|. +.+.++++++++.+++..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+|+|+++
T Consensus 594 v~~G~-el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkea 672 (902)
T PRK10517 594 VLIGS-DIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREA 672 (902)
T ss_pred ceeHH-HHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHh
Confidence 33333 33467788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCC
Q 005830 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSPY 674 (675)
Q Consensus 621 ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f 674 (675)
||+|+++++|+.|++++++||++|+|++|++.|.++.|+..++++++..++.||
T Consensus 673 ADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~ 726 (902)
T PRK10517 673 ADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPF 726 (902)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999887777665555553
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-112 Score=985.76 Aligned_cols=646 Identities=30% Similarity=0.475 Sum_probs=558.1
Q ss_pred ccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CC
Q 005830 19 LERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG----GG 93 (675)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~ 93 (675)
.|..+.+++++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|++||++|+.++++++++++++++.. .+
T Consensus 27 ~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 27 EAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred HHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 47789999999999998899999999999999999999876 56888999999999999999999999987421 12
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEEC------CeEEEEEcCCccCCcEEEecCCCee
Q 005830 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIV 167 (675)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiv~l~~G~~i 167 (675)
....|.++++|+++++++.+++++++++++++.++|++..+++++|+|| |++++|++++|+|||+|.|++||+|
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 2347889999999999999999999999999999999999999999999 4899999999999999999999999
Q ss_pred eeeEEEEecCCeeEeeccccCCCcccccCC-----------------------CCccccceeeeeceEEEEEEEecchhh
Q 005830 168 PADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVHTF 224 (675)
Q Consensus 168 PaD~~vl~g~~~~Vdes~LTGEs~pv~K~~-----------------------~~~v~aGt~v~~g~~~~~V~~tG~~T~ 224 (675)
||||+|++|+.+.||||+|||||.|+.|.+ +|.+|+||.+.+|.+.++|++||.+|.
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999778999999999999999975 368999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 005830 225 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (675)
Q Consensus 225 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 304 (675)
+|++.+++.+.+..+++++.++++.+++..+..+++.+.+++.+ ....+|..++..++++++++|||+||++++++++.
T Consensus 267 ~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~-~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~ 345 (903)
T PRK15122 267 FGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING-FTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAK 345 (903)
T ss_pred hhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 99999998776667889999888887644333222222222222 23457888999999999999999999999999999
Q ss_pred HHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccc--cCcChHHHH
Q 005830 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAA 382 (675)
Q Consensus 305 ~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a 382 (675)
++.+|+++|+++|+.+++|+||++|++|||||||||+|+|++.+.+. ..+.+.++++.+++.++.. ..+||++.|
T Consensus 346 g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~A 422 (903)
T PRK15122 346 GAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQA 422 (903)
T ss_pred HHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHH
Confidence 99999999999999999999999999999999999999999988652 2233455677666543322 235999999
Q ss_pred HHhhcCCh--HHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC----------ChHHHHHHHH
Q 005830 383 IVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHA 450 (675)
Q Consensus 383 i~~~~~~~--~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~ 450 (675)
++.++... ......++.++.+||++.+++|++++++.+|++++++|||||.++++|+. +++.++++.+
T Consensus 423 ll~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 502 (903)
T PRK15122 423 VVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLA 502 (903)
T ss_pred HHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHH
Confidence 99876432 11234577889999999999999998877788899999999999999963 2334566778
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCC-----CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTK-----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE 525 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~-----~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ 525 (675)
..+.++.+|+|++++||++++..+. +..|++|+|+|+++|+||+||+++++|++||++||+++|+|||++.||.+
T Consensus 503 ~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a 582 (903)
T PRK15122 503 LAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582 (903)
T ss_pred HHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 8899999999999999998865431 23578999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCC
Q 005830 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (675)
Q Consensus 526 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 605 (675)
+|+++||.. ...+.| .+.+.++++++.+.+++..||||++|+||.++|+.||++|++|+|+|||.||+|||++||
T Consensus 583 IA~~lGI~~----~~vi~G-~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~AD 657 (903)
T PRK15122 583 ICREVGLEP----GEPLLG-TEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657 (903)
T ss_pred HHHHcCCCC----CCccch-HhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCC
Confidence 999999953 223333 334467788899999999999999999999999999999999999999999999999999
Q ss_pred ccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 606 vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
||||||+|+|+|+++||+|+++|||+.|++++++||++|+|++|++.|.++.|+..++.+++..++.|
T Consensus 658 VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~ 725 (903)
T PRK15122 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIP 725 (903)
T ss_pred EEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999887666544433333
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-112 Score=983.44 Aligned_cols=640 Identities=30% Similarity=0.456 Sum_probs=559.8
Q ss_pred CccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005830 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 96 (675)
+.|.++.+++++.|+++.+|||++|+.+|+++||+|+++.++ .++|+.|+++|++|++++++++++++++..
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 357889999999999998899999999999999999999887 458889999999999999999999999864
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEE------CCeEEEEEcCCccCCcEEEecCCCeeeee
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPAD 170 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r------~g~~~~i~~~~L~~GDiv~l~~G~~iPaD 170 (675)
.|.++++++++++++.+++++++++++++.+++++..+++++|+| ||++++|++++|+|||+|.|++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 788999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred EEEEecCCeeEeeccccCCCcccccCCCC-------------ccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCC
Q 005830 171 ARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237 (675)
Q Consensus 171 ~~vl~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~ 237 (675)
|+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++.+.++
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999977899999999999999998874 69999999999999999999999999999999887667
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccc
Q 005830 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (675)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk 317 (675)
++++++.++++++++..+.++.+.+.++++ .....+|..++..++++++++|||+||++++++++.++.+|+++|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMIN-GLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheehH-HHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 789999999999886554444333322222 2234578888999999999999999999999999999999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccc--cCcChHHHHHHhhcCCh--HHH
Q 005830 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KEA 393 (675)
Q Consensus 318 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 393 (675)
+++++|+||++|++|||||||||+|+|++.+... ..+.+.++++.+++.++.. ..+||++.|++.++... ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 9999999999999999999999999999988641 2233456667666544332 23599999999876532 223
Q ss_pred hcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEE
Q 005830 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (675)
Q Consensus 394 ~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 463 (675)
+..++.++.+||+|.+|+|++++.+.++.+++++||+||.++++|+. +++.++++.+.++.++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 44677889999999999999988776666789999999999999963 23345677888899999999999
Q ss_pred EEEeeccCCcCC---CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC
Q 005830 464 GVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (675)
Q Consensus 464 ~~a~~~~~~~~~---~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 540 (675)
++|+++++..+. +..|++|+|+|+++|+||+|++++++|++|+++||+++|+|||++.||.++|+++||..+ .
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----D 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----C
Confidence 999998865432 124789999999999999999999999999999999999999999999999999999632 2
Q ss_pred CccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhc
Q 005830 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (675)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ 620 (675)
.+.+. ....++++++.+.+++..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+|+|+++
T Consensus 559 v~~g~-~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGA-DIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637 (867)
T ss_pred eeecH-hhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHh
Confidence 33333 33456677888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 621 ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
||+|+++++|+.|++++++||++|+|++|++.|.++.|+..++.+++..++.|
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~ 690 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIP 690 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999987776655444444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-113 Score=998.32 Aligned_cols=648 Identities=34% Similarity=0.538 Sum_probs=567.4
Q ss_pred ccCccccCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 005830 16 SVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG 91 (675)
Q Consensus 16 ~~~~~~~~~~--~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (675)
...+|..+.+ ++...+.++ .+||+++|+.+|++.||+|+++..+ .+.|..|+.||++|+.+++++++++++++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-- 97 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG-- 97 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 5567888888 999999888 8899999999999999999999765 678999999999999999999999999875
Q ss_pred CCCCCch----hhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCee
Q 005830 92 GGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (675)
Q Consensus 92 ~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~i 167 (675)
.| .++..|+.+++++.++.++++++++++++++++..+++++|+|||++++|++++|||||||++++||+|
T Consensus 98 -----~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~v 172 (917)
T COG0474 98 -----DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172 (917)
T ss_pred -----cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcc
Confidence 44 455678888899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEecCCeeEeeccccCCCcccccCC--------------CCccccceeeeeceEEEEEEEecchhhhhhhhhhhh
Q 005830 168 PADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233 (675)
Q Consensus 168 PaD~~vl~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~ 233 (675)
|||+++++++++.||||+|||||.|+.|.+ .|++|+||.+.+|++.++|++||.+|.+|++..++.
T Consensus 173 PAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~ 252 (917)
T COG0474 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLP 252 (917)
T ss_pred ccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhc
Confidence 999999999777999999999999999963 478999999999999999999999999999999998
Q ss_pred cc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhc
Q 005830 234 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 312 (675)
Q Consensus 234 ~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~ 312 (675)
.. ...+++++.++++..+++.+.+++.++.++..++....+|...+..+++++++++|++||+.++++++.++.+|+++
T Consensus 253 ~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 253 TKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 88 68899999999999887666555555444444443344488999999999999999999999999999999999999
Q ss_pred CcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCC------cH---HHHHHHHHHc--ccc------C
Q 005830 313 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------KE---HVILLAARAS--RTE------N 375 (675)
Q Consensus 313 ~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~------~~---~~l~~~~~~~--~~~------~ 375 (675)
++++|+++++|+||++++||+|||||||+|+|+|.+++........+ .. +++..++.|+ ... .
T Consensus 333 ~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~ 412 (917)
T COG0474 333 NAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA 412 (917)
T ss_pred cchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceec
Confidence 99999999999999999999999999999999999988752011111 11 1333333332 111 4
Q ss_pred cChHHHHHHhhcC------ChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC-------Ch
Q 005830 376 QDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------RE 442 (675)
Q Consensus 376 ~~~~~~ai~~~~~------~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~-------~~ 442 (675)
+||.|.|+++++. +.......+++++.+||+|.||||++++++.+|++++++|||||.|+++|+. .+
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~ 492 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTE 492 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCH
Confidence 6999999998774 3444555667899999999999999999977788999999999999999973 45
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC----CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC
Q 005830 443 DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518 (675)
Q Consensus 443 ~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~----~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd 518 (675)
+.++.+.+..++|+++|+|++++|||.++..+. +..|++|+|+|+++|+||+|++++++|+.|+++||++||+|||
T Consensus 493 ~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 677899999999999999999999998766544 5789999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCH
Q 005830 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598 (675)
Q Consensus 519 ~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~ 598 (675)
|+.||.++|++||+..+... .....+.+...++++++.+.+++..||||++|+||.++|+.+|+.|++|+|+|||+||+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~-~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 573 HVETAIAIAKECGIEAEAES-ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCc-eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 99999999999998754322 22333444456667788899999999999999999999999999999999999999999
Q ss_pred HHHHhCCccEEcC-CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 005830 599 PALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQK 671 (675)
Q Consensus 599 ~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 671 (675)
||||+|||||||+ +|+|++|++||+++.+++|..++.++.+||++|.|+++++.|.++.|+..+++++++.++
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~ 725 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLF 725 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 799999999999999999999999999999999999999999999999976666555443
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-112 Score=994.63 Aligned_cols=646 Identities=28% Similarity=0.434 Sum_probs=548.5
Q ss_pred ccCccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Q 005830 16 SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGG 93 (675)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 93 (675)
..+||..+++++.+.|+++ .+|||++|+.+|+++||+|+++.++ .++|..|++||++|+.++++++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 4569999999999999999 6899999999999999999999876 678899999999999999999999999875
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEE
Q 005830 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (675)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~v 173 (675)
.|.++++|+++++++.++.+++|+++++++++|++..+++++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEeeccccCCCcccccCCC---------------CccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC--
Q 005830 174 LEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-- 236 (675)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~---------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-- 236 (675)
++++++.||||+|||||.|+.|.+. |++|+||.|.+|++.++|++||.+|.+|++.+++.+..
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998899999999999999999642 57899999999999999999999999999999875421
Q ss_pred ----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Q 005830 237 ----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL 282 (675)
Q Consensus 237 ----------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (675)
..+++++.+++++.++..+.++.+++.+++.+. ..+...+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHH
Confidence 138999999999887544433333322222111 1234566778
Q ss_pred HHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeec-----c--
Q 005830 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF-----A-- 355 (675)
Q Consensus 283 ~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~-----~-- 355 (675)
++++++++|++||+.++++++++++||+++++++|++.++|+||.+++||+|||||||+|+|+|.+++.... .
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 899999999999999999999999999999999999999999999999999999999999999998764210 0
Q ss_pred -cCC---------------------------------------------Cc---HHHHHHHHHHcc------------cc
Q 005830 356 -KGV---------------------------------------------EK---EHVILLAARASR------------TE 374 (675)
Q Consensus 356 -~~~---------------------------------------------~~---~~~l~~~~~~~~------------~~ 374 (675)
.++ .. .+++..++.|+. ..
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 000 00 123443443321 11
Q ss_pred CcChHHHHHHhhcCCh----------HHH-------------------hcCCcEEEEecCCccCcceEEEEEcCCC-cEE
Q 005830 375 NQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NWH 424 (675)
Q Consensus 375 ~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~~~~~~f~~~~k~~sv~~~~~~g-~~~ 424 (675)
.++|.|.|++.++... ... ...++.+..+||+|.+|||++++++.++ +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 2589999998765210 011 2246789999999999999999986544 478
Q ss_pred EEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcC------------CCCCCC
Q 005830 425 RASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPGA 480 (675)
Q Consensus 425 ~~~kGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~------------~~~~e~ 480 (675)
+|+|||||.|+++|+. +++.++++.+.+++|+++|+||+++||++++.++ ++..|+
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 9999999999999962 2344677888899999999999999999886532 234689
Q ss_pred CcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-------CCCccCCccccccCc
Q 005830 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-------SSSLLGQDKDASIAA 553 (675)
Q Consensus 481 ~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-------~~~~~~~~~~~~~~~ 553 (675)
+|+|+|+++++||+|++++++|+.||++||+++|+|||++.||.++|+++||...... ......+.....+++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~ 713 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSD 713 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCH
Confidence 9999999999999999999999999999999999999999999999999999643110 111222223335566
Q ss_pred ccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhH
Q 005830 554 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 554 ~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~ 632 (675)
+++++..++..||||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|++.|+++||+++++++|++
T Consensus 714 ~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~ 793 (1053)
T TIGR01523 714 EEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFAS 793 (1053)
T ss_pred HHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHH
Confidence 7788888888999999999999999999999999999999999999999999999998 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 005830 633 IISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQK 671 (675)
Q Consensus 633 i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 671 (675)
|++++.+||++|+|+++++.|.+++|+..++.++++.++
T Consensus 794 I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~ 832 (1053)
T TIGR01523 794 ILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAF 832 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999887777665554
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-114 Score=890.07 Aligned_cols=658 Identities=88% Similarity=1.307 Sum_probs=637.0
Q ss_pred chHhhhccccCccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005830 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIA 87 (675)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (675)
++++.++|..+...+|.|++.++|++...|||++|+.+|+++||+|++..++.+.+++|+..||+|+.|++..++++.+.
T Consensus 7 s~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~ 86 (942)
T KOG0205|consen 7 SLEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIG 86 (942)
T ss_pred chhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 37888888888999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCee
Q 005830 88 LANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (675)
Q Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~i 167 (675)
+..+++.++.|.++..|..++++++.++|++|+++.+...+|++...++++|+|||+|.++++++||||||+.++.|++|
T Consensus 87 Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIi 166 (942)
T KOG0205|consen 87 LANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDII 166 (942)
T ss_pred HhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCCCchHHHHHH
Q 005830 168 PADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247 (675)
Q Consensus 168 PaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~~~~~~~~~ 247 (675)
|||+++++|+-+.||+|.|||||.|+.|++|+.+|+||+|.+|++.++|++||.+|..|+.++++.+.+...+|++.++.
T Consensus 167 PaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~ 246 (942)
T KOG0205|consen 167 PADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTG 246 (942)
T ss_pred cCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcC
Q 005830 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (675)
Q Consensus 248 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~ 327 (675)
+..++++.+++++++.+.+.|+.+...+...+...+.+++..+|.++|..+++.+++++.||+++|.+++...++|+++.
T Consensus 247 IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAG 326 (942)
T KOG0205|consen 247 IGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 326 (942)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhC
Confidence 99999999999998888888888888888888888888888899999999999999999999999999999999999999
Q ss_pred ceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCc
Q 005830 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (675)
Q Consensus 328 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~ 407 (675)
+|++|+|||||||.|++.+.+.+++.+..+.++++++..|+.+++..+.|++|.|+++.+.+|.+.+.++++++++||++
T Consensus 327 mdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnP 406 (942)
T KOG0205|consen 327 MDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNP 406 (942)
T ss_pred ceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCc
Confidence 99999999999999999999988888899999999999999999999999999999999999999999999999999999
Q ss_pred cCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEE
Q 005830 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (675)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 487 (675)
..||....+.+++|+++.++|||||.|++.|+.+.++++..+..+++|+++|+|.+++|++..++...+.....++|+|+
T Consensus 407 V~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gl 486 (942)
T KOG0205|consen 407 VDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGL 486 (942)
T ss_pred cccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE
Q 005830 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (675)
Q Consensus 488 i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (675)
.-+-||+|.++.++|+.....|+.|.|+|||....++..++++|+..++++.....+...+..+...+.++++++.+-|+
T Consensus 487 lp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfA 566 (942)
T KOG0205|consen 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFA 566 (942)
T ss_pred cccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHH
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i 647 (675)
.+.|+||.++|+.||++++.|+|+|||+||+|+|+.||+||++..++|+|+.++|+|++++.++.++.++..+|.+|+++
T Consensus 567 gVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrm 646 (942)
T KOG0205|consen 567 GVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (942)
T ss_pred ccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHH
Q 005830 648 KNYTIYAVSITIRIVVSV 665 (675)
Q Consensus 648 ~~~i~~~~~~n~~~~~~~ 665 (675)
+.+..|+++..+-+++.+
T Consensus 647 knytiyavsitiriv~gf 664 (942)
T KOG0205|consen 647 KNYTIYAVSITIRIVFGF 664 (942)
T ss_pred hhheeeeehhHHHHHHHH
Confidence 999999988887654433
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-109 Score=974.23 Aligned_cols=666 Identities=25% Similarity=0.400 Sum_probs=560.1
Q ss_pred CccchHhhhcc-ccCccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHH
Q 005830 5 KAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAA 81 (675)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~ 81 (675)
|+.|+++.+.+ .++||..+++++++.|+++ .+|||++|+++|+++||+|+++.++ .++|+.|+++|++|++++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~a 81 (997)
T TIGR01106 2 KKRDLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIG 81 (997)
T ss_pred CcchhhhhhhhccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHH
Confidence 34466665555 6789999999999999999 7799999999999999999998865 5578899999999999999999
Q ss_pred HHHHHHHhc-C-----CCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccC
Q 005830 82 AIMAIALAN-G-----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVP 155 (675)
Q Consensus 82 ~i~~~~~~~-~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~ 155 (675)
++++++... . ......|+++++++++++++.++++++++|+++.++++++..+.+++|+|||++++|++++|+|
T Consensus 82 a~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~ 161 (997)
T TIGR01106 82 AILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVV 161 (997)
T ss_pred HHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCC
Confidence 999877532 1 1123478889999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCC----------ccccceeeeeceEEEEEEEecchhhh
Q 005830 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFF 225 (675)
Q Consensus 156 GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~ 225 (675)
||+|.|++||+|||||++++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+
T Consensus 162 GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~ 241 (997)
T TIGR01106 162 GDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVM 241 (997)
T ss_pred CCEEEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchh
Confidence 99999999999999999999977899999999999999998864 69999999999999999999999999
Q ss_pred hhhhhhhhcc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 005830 226 GKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (675)
Q Consensus 226 g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 304 (675)
|++.+++++. .+++++++.++++..++..++++..++.++ .+.....+|...+..++++++++|||+||++++++++.
T Consensus 242 g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~ 320 (997)
T TIGR01106 242 GRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFI-LSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTL 320 (997)
T ss_pred hHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHH
Confidence 9999988765 467899999999888755444333333222 22334567888888999999999999999999999999
Q ss_pred HHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeeccc---C--------CCc-----HHHHHHHH
Q 005830 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK---G--------VEK-----EHVILLAA 368 (675)
Q Consensus 305 ~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~---~--------~~~-----~~~l~~~~ 368 (675)
++.+|+++|+++|+++++|+||+++++|||||||||+|+|+|.+++...... + .+. +.++..++
T Consensus 321 ~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~a 400 (997)
T TIGR01106 321 TAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAG 400 (997)
T ss_pred HHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999876421100 0 111 13444444
Q ss_pred HHccc---------------cCcChHHHHHHhhcC----ChHHHhcCCcEEEEecCCccCcceEEEEEcC---CCcEEEE
Q 005830 369 RASRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRA 426 (675)
Q Consensus 369 ~~~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~---~g~~~~~ 426 (675)
.++.. ..++|.|.|+++++. +....+..++.++.+||+|.+|||++++... ++++++|
T Consensus 401 lcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~ 480 (997)
T TIGR01106 401 LCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLV 480 (997)
T ss_pred HcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEE
Confidence 44211 124789999988753 2344556788899999999999999887632 2467899
Q ss_pred EcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC--------C---CCCCCcEEE
Q 005830 427 SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------E---SPGAPWQLV 485 (675)
Q Consensus 427 ~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~--------~---~~e~~l~~l 485 (675)
+|||||.|+++|+. +++.++.+.+.+++++++|+||+++||++++.++. + ..|++|+|+
T Consensus 481 ~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~fl 560 (997)
T TIGR01106 481 MKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFV 560 (997)
T ss_pred EeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEE
Confidence 99999999999962 23456778888999999999999999998865321 1 238899999
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC---------------------CCccC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS---------------------SSLLG 544 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~---------------------~~~~~ 544 (675)
|+++++||+|++++++|++|+++|++++|+|||+..+|.++|+++|+..+.... ..+..
T Consensus 561 Gli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~ 640 (997)
T TIGR01106 561 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVH 640 (997)
T ss_pred EEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEE
Confidence 999999999999999999999999999999999999999999999996432110 01122
Q ss_pred CccccccCcccHHHHhhhcC--EEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhcc
Q 005830 545 QDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (675)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~a 621 (675)
+.....++++++++.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| .|+++++++|
T Consensus 641 G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aA 720 (997)
T TIGR01106 641 GSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 720 (997)
T ss_pred hHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhh
Confidence 22223455667777777654 99999999999999999999999999999999999999999999999 7999999999
Q ss_pred CEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 005830 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQK 671 (675)
Q Consensus 622 d~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 671 (675)
|+++++|+|++|++++.+||++|+|+++++.|.++.|+..+++.+++.++
T Consensus 721 DivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 770 (997)
T TIGR01106 721 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIA 770 (997)
T ss_pred ceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887766655554
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-109 Score=969.98 Aligned_cols=645 Identities=25% Similarity=0.392 Sum_probs=545.1
Q ss_pred cCHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhc------C
Q 005830 22 IPIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALAN------G 91 (675)
Q Consensus 22 ~~~~~~~~~l~~~-~~GL~--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~ 91 (675)
-+.++++++|+++ .+||| ++|+++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++. .
T Consensus 42 ~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~ 121 (941)
T TIGR01517 42 GGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGK 121 (941)
T ss_pred CCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhccccccc
Confidence 3788999999999 77999 999999999999999999875 678889999999999999999999998762 1
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeee
Q 005830 92 GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPAD 170 (675)
Q Consensus 92 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD 170 (675)
.+....|+++++++++++++.++.++++++++++.+++++. .+++++|+|||++++|++++|+|||+|.|++||+||||
T Consensus 122 ~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 201 (941)
T TIGR01517 122 ADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPAD 201 (941)
T ss_pred CccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEeccc
Confidence 22344799999998889999999999999999999998764 47799999999999999999999999999999999999
Q ss_pred EEEEecCCeeEeeccccCCCcccccCCCCc--cccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCCCchHHHHHHH
Q 005830 171 ARLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (675)
Q Consensus 171 ~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~--v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~~~~~~~~~~ 248 (675)
|+|++|+.+.||||+|||||.|+.|.+++. +|+||.+.+|.+.++|++||.+|.+|++.+++...++++++++.++++
T Consensus 202 ~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~ 281 (941)
T TIGR01517 202 GVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSEL 281 (941)
T ss_pred EEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHH
Confidence 999999789999999999999999998776 999999999999999999999999999999888776677999999998
Q ss_pred HHHHHHHHHHHHHHHHHHH---Hhcc---c---------cchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcC
Q 005830 249 GNFCICSIAVGIVAEIIIM---YPVQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 313 (675)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~ 313 (675)
..++..++++.+++.++++ |... . .++...+..++++++++|||+||++++++++.++.+|+++|
T Consensus 282 ~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ 361 (941)
T TIGR01517 282 AGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDN 361 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCC
Confidence 8775433322222212111 1111 1 24667788899999999999999999999999999999999
Q ss_pred cccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccC-------CC--cHHHHHHHHHH-ccc----------
Q 005830 314 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG-------VE--KEHVILLAARA-SRT---------- 373 (675)
Q Consensus 314 i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-------~~--~~~~l~~~~~~-~~~---------- 373 (675)
+++|+++++|+||+++++|||||||||+|+|++.+++....... .+ ..+++..++.+ +..
T Consensus 362 ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~ 441 (941)
T TIGR01517 362 NLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKR 441 (941)
T ss_pred CEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCcc
Confidence 99999999999999999999999999999999988764321100 00 12223322222 211
Q ss_pred -cCcChHHHHHHhhcC----ChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCC-------
Q 005830 374 -ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------- 441 (675)
Q Consensus 374 -~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~------- 441 (675)
..++|.|.|++.++. +....+..++.++.+||++.+|+|+++++..++++++++|||||.++++|+.-
T Consensus 442 ~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~ 521 (941)
T TIGR01517 442 AFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEA 521 (941)
T ss_pred ccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCc
Confidence 125789999988763 23333445677888999999999999998767778999999999999999631
Q ss_pred ---hHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC---CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEE
Q 005830 442 ---EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (675)
Q Consensus 442 ---~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~ 515 (675)
.+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||+|++++++|++||++|++++|+
T Consensus 522 ~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~mi 601 (941)
T TIGR01517 522 TPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMV 601 (941)
T ss_pred ccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEE
Confidence 0135677888899999999999999999865432 3347899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCc
Q 005830 516 TGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGV 595 (675)
Q Consensus 516 TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ 595 (675)
|||++.||.++|+++||.... ...+.+. ....++++++++.+++..||||++|+||.++|+.+|++|++|+|+|||.
T Consensus 602 TGD~~~tA~~iA~~~GI~~~~--~~vi~G~-~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGv 678 (941)
T TIGR01517 602 TGDNIDTAKAIARNCGILTFG--GLAMEGK-EFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGT 678 (941)
T ss_pred CCCChHHHHHHHHHcCCCCCC--ceEeeHH-HhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 999999999999999997431 1223333 3345667788889999999999999999999999999999999999999
Q ss_pred cCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 005830 596 NDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNIL 669 (675)
Q Consensus 596 ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 669 (675)
||+|||++|||||||| +|+|+|+++||+++++++|++|++++++||++|+|+++++.|.+++|+..++..++..
T Consensus 679 NDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~ 753 (941)
T TIGR01517 679 NDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGS 753 (941)
T ss_pred chHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999999999999998766665443
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-107 Score=949.56 Aligned_cols=630 Identities=30% Similarity=0.474 Sum_probs=546.8
Q ss_pred CccccCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-ccHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCCC
Q 005830 18 DLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGGG 93 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~ 93 (675)
+||.++++++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 58999999999999999 67999 99999999999999999876 67788999999 8999999999999999875
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEE
Q 005830 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (675)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~v 173 (675)
.|.+++.++++++++..+.+++++++++.++++++..+++++|+|||++++|+++||+|||+|.|++||+|||||+|
T Consensus 79 ---~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 ---NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred ---chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 78888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEeeccccCCCcccccCCCC--------------ccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CC
Q 005830 174 LEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QV 238 (675)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~~--------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~ 238 (675)
++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++++.. ++
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99977899999999999999998863 7999999999999999999999999999999887754 57
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCccccc
Q 005830 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 318 (675)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~ 318 (675)
+++++.+++++.++..+.++.+++.+++.|. ...+|..++..++++++++|||+||++++++++.++.||+++|+++|+
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~ 314 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRK 314 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 8999999999987654433323332333333 456788899999999999999999999999999999999999999999
Q ss_pred chhhhhhcCceEEEecCCCccccCceeeeeeeeeeccc----C--C-------------------CcHHHHHHHHHHccc
Q 005830 319 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK----G--V-------------------EKEHVILLAARASRT 373 (675)
Q Consensus 319 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----~--~-------------------~~~~~l~~~~~~~~~ 373 (675)
.+++|+||++|++|||||||||+|+|++.+++...... . . ...+++..++.++..
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999998876421000 0 0 012344444433322
Q ss_pred --------cCcChHHHHHHhhcCCh--HHHhcCCcEEEEecCCccCcceEEEEEcC-CCcEEEEEcCcHHHHHHhccC--
Q 005830 374 --------ENQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC-- 440 (675)
Q Consensus 374 --------~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~~f~~~~k~~sv~~~~~-~g~~~~~~kGa~e~i~~~~~~-- 440 (675)
..+||++.|++.++... ...+..++.++.+||+|.+|||+++++.. +++++.++||+||.|+..|+.
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 12479999999876421 22334578899999999999999988753 577899999999999999963
Q ss_pred ---------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCe
Q 005830 441 ---------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN 511 (675)
Q Consensus 441 ---------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~ 511 (675)
+++.++++.+.+++++++|+|++++||+++ +.+|+|+|+++++||+||+++++|+.|+++|++
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 133456778888999999999999999975 467999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEE
Q 005830 512 VKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMT 591 (675)
Q Consensus 512 v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~i 591 (675)
++|+|||+..+|.++|+++||..... ..+. +.....++++++++.+++..||||++|+||..+|+.+|+.|++|+|+
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~~--~~v~-g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKTS--QSVS-GEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCC--ceeE-hHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 99999999999999999999975321 1222 33334566778888999999999999999999999999999999999
Q ss_pred CCCccCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005830 592 GDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVP 666 (675)
Q Consensus 592 GDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 666 (675)
|||.||+|||++|||||+|| +|+++++++||+++++++|+.+++++++||++|+|+++++.|.++.|+..++..+
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~ 699 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIA 699 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99999999999999999998 7999999999999999999999999999999999999999999999988765553
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-108 Score=872.72 Aligned_cols=643 Identities=26% Similarity=0.395 Sum_probs=532.0
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCccccc-HHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCCCCCc
Q 005830 23 PIEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKES-KVLKFLGFMWNPLSWVMEAAAIMAIALAN-GGGRDPD 97 (675)
Q Consensus 23 ~~~~~~~~l~~~-~~GL~~--~e~~~r~~~~G~N~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~ 97 (675)
..+++++.|+++ ..||+. +|..+|++.||+|.++.++++ +|+..|+.+.+.-..++.+++++++.+++ .++....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 588999999999 889987 889999999999999998855 56667899999998999999999999876 4455679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh-cCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEec
Q 005830 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (675)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g 176 (675)
|++++.|++.+++..++....+|+.+++.+.|.+ ....+..|+|||+.++|+..||+||||+.|+.||.+||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999988766555555555555555555544442 345678999999999999999999999999999999999999999
Q ss_pred CCeeEeeccccCCCcccccCC--CCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHH-
Q 005830 177 DPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC- 252 (675)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~--~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~- 252 (675)
+++.+|||++||||.++.|.+ ...+++||++.+|.+.++|+.+|.+|..|+++.++.... +++++|-++++++...
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 457899999999999999999999999999998887764 8899998888876542
Q ss_pred --HHHHHHHHHHHHHHHHhccc-----c---chH--------HHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCc
Q 005830 253 --ICSIAVGIVAEIIIMYPVQH-----R---KYR--------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (675)
Q Consensus 253 --~~~i~~~~~~~~~~~~~~~~-----~---~~~--------~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i 314 (675)
.+.++...++.+++.|+... . .+. ..+...+.++++++|++||+++++++++++++|.+++.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 22222222222333343211 1 111 12233345677889999999999999999999999999
Q ss_pred ccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCC-------CcHHHHHH---HH-HHc------------
Q 005830 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV-------EKEHVILL---AA-RAS------------ 371 (675)
Q Consensus 315 ~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~-------~~~~~l~~---~~-~~~------------ 371 (675)
++|..+++|++|+.++||+|||||||.|+|++.+.++....+.. -++.+..+ .. ..+
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 99999999999999999999999999999999887663222210 11222211 11 111
Q ss_pred -cccCcChHHHHHHhhc----CChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC------
Q 005830 372 -RTENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 440 (675)
Q Consensus 372 -~~~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~------ 440 (675)
....++|.++|++.+. .+.+..+.....++.+||+|.+|+|+++++.+++..++|+|||.|.++..|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 0112489999998875 35566777788999999999999999999987776349999999999999973
Q ss_pred -----ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCc-------C-CCCCCCCcEEEEEecccCCCCcchHHHHHHHHh
Q 005830 441 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALN 507 (675)
Q Consensus 441 -----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-------~-~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~ 507 (675)
+++.+..+...++.|+.+|+|++++||+++... + .+..+.+|+++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566889999999999999999999984332 1 245688999999999999999999999999999
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCE
Q 005830 508 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI 587 (675)
Q Consensus 508 ~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~ 587 (675)
|||+|.|+||||..||+++|.+|||.++.... ....+.+...+++++.+++..+.+|+||.+|.+|+.+|+.|+++|++
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~-~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDF-LALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCcc-ceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 99999999999999999999999998764442 33444555588899999999999999999999999999999999999
Q ss_pred EEEECCCccCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005830 588 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVP 666 (675)
Q Consensus 588 v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 666 (675)
|+++|||.||+|||++||||.||| .|+++||++||+|++||||++|+.++.|||+.|.||+|+++|.++.|+..++..|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 8999999999999999999999999999999999999999999999987654443
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-103 Score=929.86 Aligned_cols=627 Identities=24% Similarity=0.301 Sum_probs=511.3
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 005830 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (675)
Q Consensus 35 ~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 114 (675)
.+|||++|+.+|+++||+|+++.+.+++|..|++++++|++++++++++++++ ..+|+++++++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~-------~~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLL-------DEYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHh-------hhhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999889999999999999998777666555444 24788999999999999999
Q ss_pred HHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEec--CCCeeeeeEEEEecCCeeEeeccccCCCcc
Q 005830 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (675)
Q Consensus 115 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~--~G~~iPaD~~vl~g~~~~Vdes~LTGEs~p 192 (675)
.+++++++.++++++.. .++.++|+|||+|++|+++||+|||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999888888544 578999999999999999999999999999 99999999999999 699999999999999
Q ss_pred cccCCC------------------Cccccceeeee-------ceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHH
Q 005830 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLT 246 (675)
Q Consensus 193 v~K~~~------------------~~v~aGt~v~~-------g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~ 246 (675)
+.|.+. +.+|+||.+.+ |.+.++|++||.+|..|++.+.+..++ ..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 35999999985 789999999999999999998876653 4567777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhc
Q 005830 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (675)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg 326 (675)
.+..+++.+.++++++. ++.+...+.++...+..++.++++++|++||++++++++.+..||+++|++|+++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~~-~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYT-IIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 66555433222222221 11222335678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCccccCceeeeeeeeeecccC----------CCcHHHHHHHHHHcc------ccCcChHHHHHHhhcCCh
Q 005830 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASR------TENQDAIDAAIVGMLADP 390 (675)
Q Consensus 327 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------~~~~~~l~~~~~~~~------~~~~~~~~~ai~~~~~~~ 390 (675)
++|++|||||||||+|+|.+.++........ .....++...+.|.. ...+||+|.|++++....
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999988764211100 011112222222211 123699999999875311
Q ss_pred ----HH--H-------------hcCCcEEEEecCCccCcceEEEEEcCC-CcEEEEEcCcHHHHHHhccCChHHHHHHHH
Q 005830 391 ----KE--A-------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (675)
Q Consensus 391 ----~~--~-------------~~~~~~~~~~~f~~~~k~~sv~~~~~~-g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~ 450 (675)
.. . ...+++++.+||+|.+|||+++++..+ +++++++|||||.|+++|+. +..++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 00 0 135678899999999999999998643 56789999999999999984 345778889
Q ss_pred HHHHHHHcCCeEEEEEeeccCCc--------CCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 005830 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~ 522 (675)
.+++++++|+||+++|||++++. ++++.|++|+|+|+++|+||+||+++++|+.|+++||+++|+|||++.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998742 2456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC-------------C--------------------------------------CccCCccc--c
Q 005830 523 GKETGRRLGMGTNMYPS-------------S--------------------------------------SLLGQDKD--A 549 (675)
Q Consensus 523 a~~ia~~~gi~~~~~~~-------------~--------------------------------------~~~~~~~~--~ 549 (675)
|.++|+++||....... . .+.|.... .
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999996432100 0 00000000 0
Q ss_pred ccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCC
Q 005830 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (675)
Q Consensus 550 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~ 629 (675)
.+..+.+.+++.+..||||++|+||.++|+.+|+.|++|+|||||+||+||||+|||||||+++ |++ .+||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 0122345667778899999999999999999999999999999999999999999999999865 444 79999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HhhcCCC
Q 005830 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPN-ILQKSPY 674 (675)
Q Consensus 630 ~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~-~~~~~~f 674 (675)
|++++++|++||+++.|+++.+.|.+.+++...+++++ +...+||
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 889 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNL 889 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcC
Confidence 99999999999999999999999999999887555533 3333443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-99 Score=881.22 Aligned_cols=601 Identities=31% Similarity=0.449 Sum_probs=501.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEEC
Q 005830 66 FLGFMWNPLSWVMEAAAIMAIALANGG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (675)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~ 142 (675)
+++||++|++++++++++++++++... .....|.++++|+++++++..+.+++++++++.++++++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 368999999999999999999976321 12358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC-------------Cccccceeeee
Q 005830 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (675)
Q Consensus 143 g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~aGt~v~~ 209 (675)
|++++|++++|||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.++ |.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997799999999999999999876 78999999999
Q ss_pred ceEEEEEEEecchhhhhhhhhhhhcc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c----ccch----HHHH
Q 005830 210 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-Q----HRKY----RDGI 279 (675)
Q Consensus 210 g~~~~~V~~tG~~T~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~----~~~~----~~~~ 279 (675)
|++.++|++||.+|.+|++.+.++.. .+++++++.+++++.++..++++.+++.+++.+.. . ..+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999888765 46789999999998875543333222222222111 1 1123 2334
Q ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeec-----
Q 005830 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (675)
Q Consensus 280 ~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~----- 354 (675)
..++++++++||++||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|++.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 456788899999999999999999999999999999999999999999999999999999999999988764210
Q ss_pred ------ccCCC-------------------cHHHHHHHHHHccc------------cCcChHHHHHHhhcCCh----H--
Q 005830 355 ------AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADP----K-- 391 (675)
Q Consensus 355 ------~~~~~-------------------~~~~l~~~~~~~~~------------~~~~~~~~ai~~~~~~~----~-- 391 (675)
...++ .+.++..++.|+.. ..++|.|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 11233333333321 12589999998764211 0
Q ss_pred --------------HHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC-----------ChHHHH
Q 005830 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (675)
Q Consensus 392 --------------~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~-----------~~~~~~ 446 (675)
..+..++.++.+||+|.+|||++++++ ++++++|+|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123456788999999999999999876 467899999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEeeccCCcC----------CCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEE
Q 005830 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (675)
Q Consensus 447 ~~~~~~~~~~~-~G~r~l~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~ 515 (675)
++.+.+++|++ +|+||+++||+.++.++ ++..|++|+|+|+++++||+|++++++|+.||++|++++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78888999999 99999999999986432 24568999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCCC--CCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECC
Q 005830 516 TGDQLAIGKETGRRLGMGTNMYPS--SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (675)
Q Consensus 516 TGd~~~~a~~ia~~~gi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGD 593 (675)
|||+..||.++|+++|+..+.... ..+.+.+ ...+++++......+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~-l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGRE-FDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHH-HhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 999999999999999997532111 1222222 2344555667777788899999999999999999999999999999
Q ss_pred CccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 005830 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNI 668 (675)
Q Consensus 594 g~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 668 (675)
|.||+|||++|||||+|++|++.++++||+++.+|+|+.+++++++||++|+|+++++.|.+++|+..++..+++
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~ 713 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLT 713 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999877766654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-98 Score=799.55 Aligned_cols=671 Identities=26% Similarity=0.430 Sum_probs=565.7
Q ss_pred CCCccchHhhhcc-ccCccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHH
Q 005830 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVME 79 (675)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~ 79 (675)
.+++.++++++++ +++.|++|++|+.+++.++ .+|||.+++.+++.+-|+|.+++|+. +.|.+|.+|+++.+.++++
T Consensus 22 ~~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~ 101 (1019)
T KOG0203|consen 22 KKKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLW 101 (1019)
T ss_pred cchhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHH
Confidence 4577888899999 8999999999999999999 99999999999999999999999884 4688999999999999999
Q ss_pred HHHHHHHHHhc---CC--C-CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCc
Q 005830 80 AAAIMAIALAN---GG--G-RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASIL 153 (675)
Q Consensus 80 ~~~i~~~~~~~---~~--~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L 153 (675)
++++++++-+. .. . .....+.+.++..++++..+..++|+.+..+.++.+.++.|..+.|+|||+...+..++|
T Consensus 102 ~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eel 181 (1019)
T KOG0203|consen 102 IGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEEL 181 (1019)
T ss_pred HHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhc
Confidence 99999998442 11 1 123444555666677788889999999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC----------CccccceeeeeceEEEEEEEecchh
Q 005830 154 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHT 223 (675)
Q Consensus 154 ~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~aGt~v~~g~~~~~V~~tG~~T 223 (675)
|+||+|.++-|++||||.+++++..++||+|+|||||+|..+.+. |+-|.+|.+++|.+.++|++||.+|
T Consensus 182 VvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~T 261 (1019)
T KOG0203|consen 182 VVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRT 261 (1019)
T ss_pred ccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCce
Confidence 999999999999999999999999999999999999999998763 6789999999999999999999999
Q ss_pred hhhhhhhhhhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHH
Q 005830 224 FFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (675)
Q Consensus 224 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~ 302 (675)
.+|+++.+... ...+++.+..++.+..+...+.+. +.+++++.....++.|..++..++.++++.+|.+|+..+++++
T Consensus 262 v~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~L 340 (1019)
T KOG0203|consen 262 VMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCL 340 (1019)
T ss_pred EEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhH
Confidence 99999988765 456788888888877663322222 2222332333347788888888999999999999999999999
Q ss_pred HHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccC----------------CCcHHHHHH
Q 005830 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------------VEKEHVILL 366 (675)
Q Consensus 303 ~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------------~~~~~~l~~ 366 (675)
....+||++++.++|+.++.|+||+..++|+|||||||+|.|+|.+.+++..... ..-..++++
T Consensus 341 tltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~ 420 (1019)
T KOG0203|consen 341 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRI 420 (1019)
T ss_pred HHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999998876421110 011234444
Q ss_pred HHHHccc---------------cCcChHHHHHHhhc----CChHHHhcCCcEEEEecCCccCcceEEEEEcCC---CcEE
Q 005830 367 AARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWH 424 (675)
Q Consensus 367 ~~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~---g~~~ 424 (675)
+..+.+. ..+++.+.|+++++ .+..+.++..+.+..+||+|.+|+.-.+....+ .++.
T Consensus 421 ~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~ 500 (1019)
T KOG0203|consen 421 ATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFL 500 (1019)
T ss_pred HHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccce
Confidence 4444321 23578889998876 344667778888899999999999877766543 5778
Q ss_pred EEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC-----------CCCCCCcE
Q 005830 425 RASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQ 483 (675)
Q Consensus 425 ~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-----------~~~e~~l~ 483 (675)
+..|||||.++++|+. ++...+.+++...++...|.||++|+++.++++++ +....+|.
T Consensus 501 l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~ 580 (1019)
T KOG0203|consen 501 LVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLR 580 (1019)
T ss_pred eeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcc
Confidence 8999999999999973 45677888999999999999999999999986642 23467899
Q ss_pred EEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC------------C---------Cc
Q 005830 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS------------S---------SL 542 (675)
Q Consensus 484 ~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------~---------~~ 542 (675)
|+|++.+-||+|..+++++..||.+||+++|+|||++.||.++|+..||....... . .+
T Consensus 581 FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~V 660 (1019)
T KOG0203|consen 581 FLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAV 660 (1019)
T ss_pred ccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEE
Confidence 99999999999999999999999999999999999999999999999975422110 0 11
Q ss_pred cCCccccccCcccHHHHhhhcC--EEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHh
Q 005830 543 LGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 619 (675)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~ 619 (675)
.-+.+...++.+++++++++.. ||||.||+||+.||+.+|++|.+|+++|||.||+||||.|||||||| .|+|++|+
T Consensus 661 ihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 661 IHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred EecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 2223344677889999998765 99999999999999999999999999999999999999999999999 89999999
Q ss_pred ccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHhhcCCC
Q 005830 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSV-PNILQKSPY 674 (675)
Q Consensus 620 ~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~-~~~~~~~~f 674 (675)
|||+||+||||++|+..+++||.+|+|+||.|+|.++.|++.+..+ +++++-.|+
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPL 796 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPL 796 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999875554 444444554
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-93 Score=787.81 Aligned_cols=541 Identities=22% Similarity=0.342 Sum_probs=440.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCch--hhHHHHHHHHHHHHHHHHH----HHHhHHHHHHHHHhcCCC-eEE
Q 005830 68 GFMWNPLSWVMEAAAIMAIALANGGG--RDPDW--QDFVGIIVLLVINSTISFI----EENNAGNAAAALMANLAP-KTK 138 (675)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~-~~~ 138 (675)
.++++|+.|+++++++++++++.... ....| ++.+.+.++++++.++..+ .++|++++.++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 35789999999999999998653110 00112 3344455555555555444 478999999999998876 676
Q ss_pred -EEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC---CccccceeeeeceEEE
Q 005830 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (675)
Q Consensus 139 -V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~---~~v~aGt~v~~g~~~~ 214 (675)
|.|||++++|++++|+|||+|.|++||+|||||+|++| ...||||+|||||.|+.|++| +.+|+||.+.+|.+.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 579999999999999999999 8899999999999999
Q ss_pred EEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCc
Q 005830 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIA 293 (675)
Q Consensus 215 ~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~ 293 (675)
+|+++|.+|.+||+.+++++++ ++++++.....+...+.+ ++++++.++ +++....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i--i~l~~~~~~-~~~~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI--IFLVVILTM-YPLAKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH--HHHHHHHHH-HHHHhhccHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999998765 678887655444322211 111111111 111111244456677788888999999
Q ss_pred chHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccc
Q 005830 294 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 373 (675)
Q Consensus 294 l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~ 373 (675)
|+..++++...++.||+|+|+++|+.+++|++|++|++|||||||||+|++.+.++.. ..+.+.++++..+..++..
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIA 340 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998887766431 2234455677776666544
Q ss_pred cCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHHHH
Q 005830 374 ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAVI 452 (675)
Q Consensus 374 ~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~~ 452 (675)
+ .||++.|++.++..... .......+.+||++.+++|++.+ +|+ .+.||+|+.++++|+.. ...+..+.+..
T Consensus 341 s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 341 D-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred C-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 4 49999999887642110 00011234589999999998764 343 45699999999999742 12234466677
Q ss_pred HHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 005830 453 DKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (675)
Q Consensus 453 ~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi 532 (675)
++++++|+|+++++.+ ++++|+++++||+||+++++|++||++||+++|+|||++.||.++|+++||
T Consensus 414 ~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 8899999999998743 389999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCC
Q 005830 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (675)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~ 612 (675)
. .+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 5 2699999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 005830 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSV 665 (675)
Q Consensus 613 ~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~ 665 (675)
|+|+||++||+|+++|||+.|++++++||++|.|+++++.|.++.|+...+..
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i 583 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAI 583 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999765444
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-91 Score=772.93 Aligned_cols=536 Identities=24% Similarity=0.326 Sum_probs=448.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----C---CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCC-eEEE
Q 005830 68 GFMWNPLSWVMEAAAIMAIALANGG----G---RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKV 139 (675)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~~~~~~~----~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~V 139 (675)
.||++|+.++++++++++++++... + ....|...+.+++.+++..+++.++++|.++..++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5789999999999999999876311 1 112344445555566777788889999999999999998875 7999
Q ss_pred EECCe-EEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCc---cccceeeeeceEEEE
Q 005830 140 LRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 215 (675)
Q Consensus 140 ~r~g~-~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~---v~aGt~v~~g~~~~~ 215 (675)
+|||+ +++|++++|+|||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+. +|+||.+.+|.+.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 99999999999999999999999999999999 68999999999999999999988 999999999999999
Q ss_pred EEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcc
Q 005830 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (675)
Q Consensus 216 V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l 294 (675)
|+++|.+|.+|++.+++++++ ++++++...+.+...+..++++.++..+.+.|+ .+.. .++..++++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 999999999999999998774 578888777666554433222222221222222 2222 377888999999999999
Q ss_pred hHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHcccc
Q 005830 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (675)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 374 (675)
+..++.+...++.||+|+|+++|+++++|.+|++|++|||||||||+|+|.+.++.. ..+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999988652 23456677777777776655
Q ss_pred CcChHHHHHHhhcCCh---HHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHH
Q 005830 375 NQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHA 450 (675)
Q Consensus 375 ~~~~~~~ai~~~~~~~---~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~ 450 (675)
. ||.+.++++++... ......+...+.+||++.++++++.+ +| ..+.||++|.+++.|+.. ...++++.+
T Consensus 342 ~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 E-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred C-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 4 89999998876431 11111234567889999887777643 34 578999999999999632 234567788
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
.+++++++|+|++++|++. +++|+++++|++|||++++|++||++||+++|+|||++.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 8899999999999999754 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 531 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
||+ .+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 995 26999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 005830 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (675)
Q Consensus 611 ~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~ 659 (675)
++|+|+|+++||+|++++||+.+++++++||++.-.--....|++...+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999988333334566655433
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-91 Score=830.38 Aligned_cols=615 Identities=19% Similarity=0.236 Sum_probs=485.7
Q ss_pred cCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 005830 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (675)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 125 (675)
|.+|.+.+++|++| +.|++||.+|.|++|+++++++++...... ..+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--YRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--CccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999876 788999999999999999999998543322 234445566777778889999999999988
Q ss_pred HHHHHhcCCCeEEEEEC-CeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecC----CeeEeeccccCCCcccccCCC--
Q 005830 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY-- 198 (675)
Q Consensus 126 ~~~l~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~----~~~Vdes~LTGEs~pv~K~~~-- 198 (675)
.+.. ++..++|+|+ |++++++|++|+|||+|.|++||+||||++|++++ .+.||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8654 4578999997 89999999999999999999999999999999853 389999999999999988631
Q ss_pred ----------------------------------------------Cccccceeeee-ceEEEEEEEecchhhhhhhhhh
Q 005830 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (675)
Q Consensus 199 ----------------------------------------------~~v~aGt~v~~-g~~~~~V~~tG~~T~~g~~~~~ 231 (675)
|.+++||.+.+ |.+.|+|++||.+|++++..
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~-- 233 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNA-- 233 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcC--
Confidence 46789999998 89999999999999887532
Q ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----cch---------------HHHHHHHHHHHHHhccC
Q 005830 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (675)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~ll~~~iP~ 292 (675)
.....+.+++++.++++..+++.+.++.+++.+++.+.+.. ..| ...+..++.++..++|+
T Consensus 234 ~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 234 TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 22234678999999999877554444333333332222111 011 22567788899999999
Q ss_pred cchHHHHHHHHHHH------HHHhhc----CcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCC----
Q 005830 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV---- 358 (675)
Q Consensus 293 ~l~~~~~~~~~~~~------~~l~~~----~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~---- 358 (675)
+|++.+++++..++ .+|.++ ++.+|+.+.+|+||+|++||+|||||||+|+|++.++.+....++.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999998 677764 4999999999999999999999999999999999998753211100
Q ss_pred -----------------------------C----------------cHHHHHHHHHHcc-------c-------cCcChH
Q 005830 359 -----------------------------E----------------KEHVILLAARASR-------T-------ENQDAI 379 (675)
Q Consensus 359 -----------------------------~----------------~~~~l~~~~~~~~-------~-------~~~~~~ 379 (675)
+ ..+++..++.|.. . ..++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0112222222211 0 124899
Q ss_pred HHHHHhhcCChH------------------HHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC-
Q 005830 380 DAAIVGMLADPK------------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (675)
Q Consensus 380 ~~ai~~~~~~~~------------------~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~- 440 (675)
|.|++.++.... .....+++++.+||+|.||||+++++++++++++++|||||.|+++|+.
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999998653210 0123577888999999999999999988888999999999999999984
Q ss_pred ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC-------------------------CCCCCCcEEEEEecccCCCC
Q 005830 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPR 495 (675)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~d~lr 495 (675)
++..++++.+.+++++.+|+||+++|+|.+++++. +.+|++|+|+|+++++||+|
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788899999999999999999999976431 34689999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC-----------------------------------
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~----------------------------------- 540 (675)
++++++|+.||++||++||+|||+.+||.++|++||+........
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975432110
Q ss_pred ----CccCCccccccC---cccHHHHhhhcC--EEEecCHHHHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCccEEc
Q 005830 541 ----SLLGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 541 ----~~~~~~~~~~~~---~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
.+.|.......+ ...+.+++...+ ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 011111110111 112233444444 99999999999999999998 99999999999999999999999998
Q ss_pred C-CccHHHHhccCEEecCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 611 A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 611 ~-~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
. .....|+.+||+++. +|+.+.+++ .+||.+|+|+++.+.|.++.|+.+++..+++.+++.
T Consensus 794 ~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~ 856 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNG 856 (1057)
T ss_pred cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4 211247789999996 499999988 779999999999999999999999888888777653
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-91 Score=750.10 Aligned_cols=628 Identities=23% Similarity=0.331 Sum_probs=494.8
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 005830 26 EVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGII 105 (675)
Q Consensus 26 ~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 105 (675)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..+|| ++|++.+++.|.. +.+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~------d~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLA------DSYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhc------ccchhhhhHHH
Confidence 4455555567899999999999999999999999999999999999999 7777777766653 34666677777
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecC-CCeeeeeEEEEecCCeeEeec
Q 005830 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQS 184 (675)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~-G~~iPaD~~vl~g~~~~Vdes 184 (675)
++.+.+..+..++.++..+.++.+-+ .+..|+|+|||.|++|.++|||||||+.+.+ |-..|||+++++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 77788888888999888888877554 5578999999999999999999999999998 8999999999999 7899999
Q ss_pred cccCCCcccccCCC-------------------Cccccceeeee------ceEEEEEEEecchhhhhhhhhhhhccCCCC
Q 005830 185 ALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239 (675)
Q Consensus 185 ~LTGEs~pv~K~~~-------------------~~v~aGt~v~~------g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~ 239 (675)
+|||||+|+.|.+- +.+|+||.+++ +.+.++|++||.+|..|++.+.+..++. .
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP-~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKP-V 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCC-c
Confidence 99999999999874 46899999986 5699999999999999998887776653 3
Q ss_pred chHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCccccc
Q 005830 240 HFQKVLTAIGNFCICSIAVG-IVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 318 (675)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~ 318 (675)
+++-+.+.+..+..+.++.+ .++..++.+...+.+....+.+++.++...+|+|||.++++...++..||.|+||+|.+
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 33433344333222222111 11122223345677888899999999999999999999999999999999999999999
Q ss_pred chhhhhhcCceEEEecCCCccccCceeeeeeeeeecc-----------------------cC-CCcHHHHHHHHHHcc--
Q 005830 319 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------------------KG-VEKEHVILLAARASR-- 372 (675)
Q Consensus 319 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-----------------------~~-~~~~~~l~~~~~~~~-- 372 (675)
|+++...|++|++|||||||||++.+.+........+ .+ ..+...+..+...++
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999998665431100 00 001011111111111
Q ss_pred -----ccCcChHHHHHHhhcC------------------------ChHH-----H----hcCCcEEEEecCCccCcceEE
Q 005830 373 -----TENQDAIDAAIVGMLA------------------------DPKE-----A----RAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 373 -----~~~~~~~~~ai~~~~~------------------------~~~~-----~----~~~~~~~~~~~f~~~~k~~sv 414 (675)
...+||+|..+.+... +|.. . ...+.+++.+||+|..+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 1124666654433210 0100 0 114678899999999999999
Q ss_pred EEEcC-CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCc--------CCCCCCCCcEEE
Q 005830 415 TYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLV 485 (675)
Q Consensus 415 ~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~l 485 (675)
++.+. +.+.++|+|||||.|.++|+ .+.++..+++.++.|+.+|+|++++|+|+++.. .++..|++|+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99875 46789999999999999998 457889999999999999999999999999866 367899999999
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC------------------------C
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS------------------------S 541 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~------------------------~ 541 (675)
|++.|++++|+.++.+|++|++++|+++|+||||..||..+||+|||.......- .
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 9999999999999999999999999999999999999999999999964321000 0
Q ss_pred c--------------------cCCccccccCcc-----------cHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEE
Q 005830 542 L--------------------LGQDKDASIAAL-----------PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (675)
Q Consensus 542 ~--------------------~~~~~~~~~~~~-----------~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~ 590 (675)
. ...+....+++. .++.++.+..|||||+|.||.++|+.||+.|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 0 000000112222 245566788999999999999999999999999999
Q ss_pred ECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005830 591 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVP 666 (675)
Q Consensus 591 iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 666 (675)
||||+|||.|||+|||||+++++. |.-||.+.-.-.+.+.+.+.|++||+.+-.--..+.|-..|.+....+++
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~ 931 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV 931 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999998542 44478887777799999999999999877777777777777766544443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-89 Score=753.94 Aligned_cols=508 Identities=27% Similarity=0.385 Sum_probs=445.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEE-CCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~ 175 (675)
+|.++.++++++.++..++.+...|+++++++|+++.|.++++++ ||++++||.++|++||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 446778888999999999999999999999999999999998776 5658999999999999999999999999999999
Q ss_pred cCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHH
Q 005830 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (675)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (675)
| ...||||+|||||.|+.|.+||.||+||.+.+|.+..+|+++|.+|.++++.+++++++ ++++.|+..|+++.++++
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 56899999999999999999999999999999999999999999999999999999885 789999999999999888
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEec
Q 005830 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (675)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~D 334 (675)
.+++..++.+++|++....+|..++..++++++++|||+|.+++|++...++.+.+++||++|+++++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 66655555555555554468999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEE
Q 005830 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 335 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv 414 (675)
||||||+|+|.+.++.. ..+ +.+++|.+++..+..+. ||++.|+++++.... .......+.+|-.. +
T Consensus 412 KTGTLT~G~p~v~~v~~---~~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G~G------v 478 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA---LDG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPGRG------V 478 (713)
T ss_pred CCCCCcCCceEEEEEec---CCC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeeccCc------E
Confidence 99999999999998763 223 77889999999888877 999999998664322 11122233333211 1
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCC
Q 005830 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (675)
Q Consensus 415 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~l 494 (675)
.. ..+| ..+..|+++.+.+.-.. ... .....+.+.++|..++.++.+. +++|+++++|++
T Consensus 479 ~~-~v~g--~~v~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 479 EA-EVDG--ERVLVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred EE-EECC--EEEEEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 11 1255 45677999987653211 111 4566778888999999999987 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
|++++++|++||+.|++++|+|||+..+|.++|+++||+. +++.+.|++|
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHH
Confidence 9999999999999999999999999999999999999953 6999999999
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 654 (675)
.++|+.||++|++|+|+|||.||+|||++||||||||.|+|+|+++||+++++++++.++++++++|+++++||||+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHH
Q 005830 655 VSITIRIVVSVPNI 668 (675)
Q Consensus 655 ~~~n~~~~~~~~~~ 668 (675)
+.||..++....+.
T Consensus 669 ~~yn~~~iplA~~g 682 (713)
T COG2217 669 FGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999887666543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-87 Score=738.40 Aligned_cols=538 Identities=22% Similarity=0.314 Sum_probs=448.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC-----C-CCCCchhhHH---HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCC-eE
Q 005830 68 GFMWNPLSWVMEAAAIMAIALANG-----G-GRDPDWQDFV---GIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (675)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~~~~~~-----~-~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 137 (675)
.||.+|+.++++++++++++++.. . +....|+++. .+++.+++..+++.++++|.+++.++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 468899999999999999987541 1 1112466543 233446777888889999999999999988776 48
Q ss_pred EEEE-CCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCc---cccceeeeeceEE
Q 005830 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (675)
Q Consensus 138 ~V~r-~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~---v~aGt~v~~g~~~ 213 (675)
+|+| ||++++|++++|+|||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+. +|+||.+.+|.+.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 78999999999999999999975 8999999999999
Q ss_pred EEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccC
Q 005830 214 AVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (675)
Q Consensus 214 ~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~ 292 (675)
++|+++|.+|.+|++.++++.++ ++++++...+.+..++.+++++.++ .++++........++...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~---~~~~~~~~~~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTA---TLWPFAAYGGNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcChhHHHHHHHHHHHHhCch
Confidence 99999999999999999998764 5788887777665544332222111 1111111112233567778899999999
Q ss_pred cchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHcc
Q 005830 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (675)
Q Consensus 293 ~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (675)
+++...+.....++.|++|+|+++|+.+++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 99888888878899999999999999999999999999999999999999999988652 234566778887777766
Q ss_pred ccCcChHHHHHHhhcCChHH--HhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHH
Q 005830 373 TENQDAIDAAIVGMLADPKE--ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (675)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~ 449 (675)
.++ ||.+.+++.++..... ........+..||++.++++++... +| ..+.||+||.++++|+.. ...+.+++
T Consensus 341 ~s~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 ADD-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CCC-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 554 9999999887642110 0111234577899998776665432 45 568999999999888532 23446677
Q ss_pred HHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 005830 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (675)
Q Consensus 450 ~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~ 529 (675)
+.+++++++|.|++++|++. +++|+++++|++||+++++|++||++|++++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88889999999999999864 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE
Q 005830 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (675)
Q Consensus 530 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia 609 (675)
+|+. .+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9995 2699999999999999999999999999999999999999999999
Q ss_pred cCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 005830 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660 (675)
Q Consensus 610 ~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~ 660 (675)
|++|++.++++||++++++||+.+++++++||+++-+......|+++.++.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999999999999998888899999888775
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-87 Score=788.36 Aligned_cols=617 Identities=17% Similarity=0.164 Sum_probs=480.6
Q ss_pred hhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 005830 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (675)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 123 (675)
.+|..|.+.+.+|++| +.+++||.++.|++|+++++++++...... ..+...+++++++++..+.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999976 678999999999999999999988644321 2455667788888888889999999998
Q ss_pred HHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecC----CeeEeeccccCCCcccccCCC-
Q 005830 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (675)
Q Consensus 124 ~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~----~~~Vdes~LTGEs~pv~K~~~- 198 (675)
++.+.. ++..++|+|+|++++++|++|+|||+|+|++||+||||+++++++ .+.||||+|||||.|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 887764 457899999999999999999999999999999999999999832 589999999999999999653
Q ss_pred --------------------------------------------Cccccceeeeec-eEEEEEEEecchhhhhhhhhhhh
Q 005830 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (675)
Q Consensus 199 --------------------------------------------~~v~aGt~v~~g-~~~~~V~~tG~~T~~g~~~~~~~ 233 (675)
|.+++||.+.+. .+.|+|++||++|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 234555555554 59999999999997421 2222
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhccc-c------------------------ch----HHHHHHH
Q 005830 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIM--YPVQH-R------------------------KY----RDGIDNL 282 (675)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~-~------------------------~~----~~~~~~~ 282 (675)
.+.+.+++++.++++..+++++.++.++++.++. |.... . .| ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2347789999999988775544433333322221 21100 0 00 1123344
Q ss_pred HHHHHHhccCcchHHHHHHHHHHHHHHhhcC----------cccccchhhhhhcCceEEEecCCCccccCceeeeeeeee
Q 005830 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (675)
Q Consensus 283 ~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~----------i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 352 (675)
+.++..++|++|++.+++++..++.++.++. +.+|+.+..|+||+|++||+|||||||+|+|++.++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5677789999999999999988788877654 679999999999999999999999999999999998763
Q ss_pred ecccC-----------------------------------------CC-c-----HHHHHHHHHHcc-------------
Q 005830 353 VFAKG-----------------------------------------VE-K-----EHVILLAARASR------------- 372 (675)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~~~~~~~~------------- 372 (675)
...++ .. . .+++...+.|..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 21110 00 0 112222222211
Q ss_pred -----ccCcChHHHHHHhhcCC----------------hHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcH
Q 005830 373 -----TENQDAIDAAIVGMLAD----------------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (675)
Q Consensus 373 -----~~~~~~~~~ai~~~~~~----------------~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~ 431 (675)
....+|.|.|++..+.. ....+..++.++.+||+|.|||||++++++++++++|+||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 11127889999887632 122355688999999999999999999988888999999999
Q ss_pred HHHHHhccCC--hHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC-------------------------CCCCCCcEE
Q 005830 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (675)
Q Consensus 432 e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~ 484 (675)
|.|+++|+.. ...++++.+.+++|+++|+|||++|||.+++++. +.+|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3456788899999999999999999999975431 346899999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCC-------------------
Q 005830 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ------------------- 545 (675)
Q Consensus 485 lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~------------------- 545 (675)
+|+++++|++|++++++|++|+++|+++||+|||+.+||.++|+.|||.........+...
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997543211000000
Q ss_pred -------------------ccccccCcc------------cHHHHhhhcC--EEEecCHHHHHHHHHHHHhC-CCEEEEE
Q 005830 546 -------------------DKDASIAAL------------PVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (675)
Q Consensus 546 -------------------~~~~~~~~~------------~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~-~~~v~~i 591 (675)
.....+++. .+.++..++. ||||++|.||+++|+.+|+. +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 000011122 2334444444 79999999999999999997 5799999
Q ss_pred CCCccCHHHHHhCCccEEc-C-CccHHHHhccCEEecCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 005830 592 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVVSVPNI 668 (675)
Q Consensus 592 GDg~ND~~al~~A~vgia~-~-~~~~~a~~~ad~vl~~~~~~~i~~~i~-~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 668 (675)
|||+||++||++|||||++ | +|.++ ..+||+.+ +.|..+.+++. +||..|+|+.+.+.|.++.|+.++++.++|
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA-~~aSDfaI--~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQA-VMASDFAM--GQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHH-HHhhccch--hhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 4 45554 45999999 56888999875 699999999999999999999999999999
Q ss_pred hhcCCC
Q 005830 669 LQKSPY 674 (675)
Q Consensus 669 ~~~~~f 674 (675)
.+++.|
T Consensus 955 ~~~~~f 960 (1178)
T PLN03190 955 VLFTCF 960 (1178)
T ss_pred HHHHcC
Confidence 999876
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-82 Score=723.76 Aligned_cols=502 Identities=26% Similarity=0.360 Sum_probs=440.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEec
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g 176 (675)
.|.++.+++++++++..++.+.+.|+++.+++|++..|++++|+|||++++|++++|+|||+|+|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 56778888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHH
Q 005830 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (675)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (675)
...||||+|||||.|+.|.+|+.||+||.+.+|.+.++|+++|.+|.++++.+++++++ +++++++.+++++.++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999998874 6799999999999998776
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecC
Q 005830 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (675)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DK 335 (675)
++++.++.++++++....+|..++..++++++++|||+|.+++|+++..+..+++|+||++|+++++|.++++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66656555555545556678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEE
Q 005830 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (675)
Q Consensus 336 TGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~ 415 (675)
|||||+|+|+|.++.. ..+.+.++++.+++..+..+. ||++.|+++++... .. .+||.+..+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s~-hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGST-HPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCCC-CHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988652 234567778888877665544 99999999876321 11 24565555544211
Q ss_pred -E-EcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCC
Q 005830 416 -Y-IDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (675)
Q Consensus 416 -~-~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~ 493 (675)
+ ...+|+. +..|+|+.+.+ ..+.+...++.+..+|+|+++++++. +++|+++|+|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 1 1235643 34689998754 11334555678889999999999865 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+|++++++|++|++.|++++|+|||+..++.++|+++||. .+++.+|++
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999984 367889999
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~ 653 (675)
|..+|+.+|+. +.|+|+|||.||+|||++|||||+|+++++.++++||+++.++++..+++++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHH
Q 005830 654 AVSITIRIVVSVP 666 (675)
Q Consensus 654 ~~~~n~~~~~~~~ 666 (675)
++.||+.++...+
T Consensus 697 a~~~n~~~i~~a~ 709 (741)
T PRK11033 697 ALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHHHHHHHHH
Confidence 9999987765543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-84 Score=697.54 Aligned_cols=522 Identities=24% Similarity=0.348 Sum_probs=450.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCe-EEEEEcCCccCCcEEEecCCCeeeeeEEE
Q 005830 95 DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARL 173 (675)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiv~l~~G~~iPaD~~v 173 (675)
...|.+..+++.++.+...++.....++..++..|+.+.|.++.++.+|+ .++||.+.|++||+|.|.||++||+||+|
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 34555666777888888889988899999999999999999999999996 89999999999999999999999999999
Q ss_pred EecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHH
Q 005830 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC 252 (675)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~ 252 (675)
++| ++.||||++|||++||.|.+|+.|.+||.+.+|.+...++++|.+|.+++|.+++++++ .+.|.|+.+|+++.++
T Consensus 418 v~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 999 67999999999999999999999999999999999999999999999999999999985 7889999999999998
Q ss_pred HHHHHHHHHHHHHHHHhccc----------cchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhh
Q 005830 253 ICSIAVGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAI 322 (675)
Q Consensus 253 ~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~l 322 (675)
...+++..++.+++|.+... ..+..++..++++++++|||+|.+++|++...+....+++|+++|..+.+
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~L 576 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEAL 576 (951)
T ss_pred CchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHH
Confidence 77777766665555554333 44567788899999999999999999999999999999999999999999
Q ss_pred hhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHh--cCCcEE
Q 005830 323 EEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEAR--AGVREV 400 (675)
Q Consensus 323 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~--~~~~~~ 400 (675)
|.+.++++++||||||||+|++.+.++.. .....+..+++.+++..+.... ||+..|+++++....... ......
T Consensus 577 E~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~Se-HPig~AIv~yak~~~~~~~~~~~~~~ 653 (951)
T KOG0207|consen 577 EKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGSE-HPIGKAIVDYAKEKLVEPNPEGVLSF 653 (951)
T ss_pred HHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCCc-CchHHHHHHHHHhcccccCcccccee
Confidence 99999999999999999999999998764 3333667788888777766655 999999999986433111 111122
Q ss_pred EEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCC
Q 005830 401 HFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480 (675)
Q Consensus 401 ~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~ 480 (675)
..+|-.. ....+. .+++. .+-|+-+++.+.-. ..++.+...+++....|..+.+++...
T Consensus 654 ~~~pg~g--~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~----------- 712 (951)
T KOG0207|consen 654 EYFPGEG--IYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG----------- 712 (951)
T ss_pred ecccCCC--cccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-----------
Confidence 2233222 221111 23433 67799998775322 234557777888889999999999988
Q ss_pred CcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHh
Q 005830 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELI 560 (675)
Q Consensus 481 ~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (675)
+++|++.++|++|||+..+|+.||+.|++++|+||||..+|+++|+++|+.
T Consensus 713 --~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------- 763 (951)
T KOG0207|consen 713 --QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------- 763 (951)
T ss_pred --EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------------------------
Confidence 999999999999999999999999999999999999999999999999974
Q ss_pred hhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 561 EKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 561 ~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
.|||.+.|+||.++|+.+|++++.|+|+|||.||+|||.+|||||+|+.|++.|.++||+||+.+++..++.+++++
T Consensus 764 ---~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LS 840 (951)
T KOG0207|consen 764 ---NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLS 840 (951)
T ss_pred ---eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 641 RAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 641 r~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
|++++++|.|+.|++.||+..+..+.+.++..|
T Consensus 841 rkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~ 873 (951)
T KOG0207|consen 841 RKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFG 873 (951)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhhhheecccCCc
Confidence 999999999999999999987766655554444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-79 Score=673.26 Aligned_cols=475 Identities=36% Similarity=0.536 Sum_probs=416.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHh--cCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEee
Q 005830 106 VLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQ 183 (675)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vde 183 (675)
++++++.+++.+++++..+..+.+.+ ..|.+++|+|+| +++|++++|+|||+|.+++||+|||||+|++| .+.|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEEc
Confidence 45667778888999999999999888 789999999999 99999999999999999999999999999999 789999
Q ss_pred ccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCC-CCchHHHHHHHH-HHHHHHHHHHHH
Q 005830 184 SALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-VGHFQKVLTAIG-NFCICSIAVGIV 261 (675)
Q Consensus 184 s~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~i~~~~~ 261 (675)
|+|||||.|+.|.+|+.+++||.+.+|.+.+.|+++|.+|..+++..++.+... ++++++..+++. .+++++++++++
T Consensus 82 s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 82 SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998877653 678899999988 554444433333
Q ss_pred HHHHHHHhcccc--chHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCcc
Q 005830 262 AEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 339 (675)
Q Consensus 262 ~~~~~~~~~~~~--~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTL 339 (675)
+.++.++..... +|..++.+++++++++|||+||+++++++..+..+++++|+++|+++.+|+||++|++||||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTL 241 (499)
T TIGR01494 162 AVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTL 241 (499)
T ss_pred HHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCcc
Confidence 333333222122 378899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEEEEcC
Q 005830 340 TLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDS 419 (675)
Q Consensus 340 T~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~ 419 (675)
|+|+|++.++.... . .....||++.++++++.. +.+...||++.+++|++++...
T Consensus 242 T~~~~~v~~~~~~~---~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~ 296 (499)
T TIGR01494 242 TKNEMSFKKVSVLG---G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRGP 296 (499)
T ss_pred ccCceEEEEEEecC---C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEecC
Confidence 99999998876321 0 123449999999987642 1235679999998888887753
Q ss_pred CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchH
Q 005830 420 DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSA 499 (675)
Q Consensus 420 ~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~ 499 (675)
++ .++||+++.+.+.|.. +.+..+++..+|+|++++|++. +++|++.++|++|++++
T Consensus 297 ~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~~ 353 (499)
T TIGR01494 297 DG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDAK 353 (499)
T ss_pred Cc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhHH
Confidence 33 4789999999988741 2334456788999999999987 89999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (675)
++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|++|.++|+
T Consensus 354 ~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v~ 400 (499)
T TIGR01494 354 ETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALVE 400 (499)
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHHH
Confidence 999999999999999999999999999999996 78999999999999
Q ss_pred HHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 005830 580 RLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (675)
Q Consensus 580 ~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~ 659 (675)
.+|+.|+.|+|+|||.||+|||++|||||+|+ ++++||++++++++..+..++.+||++++++++++.|++++|+
T Consensus 401 ~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~ 475 (499)
T TIGR01494 401 ALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNL 475 (499)
T ss_pred HHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 6889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 005830 660 RIVVSVPNI 668 (675)
Q Consensus 660 ~~~~~~~~~ 668 (675)
..+..++++
T Consensus 476 ~~~~~a~~~ 484 (499)
T TIGR01494 476 ILIPLAALL 484 (499)
T ss_pred HHHHHHHHH
Confidence 876666543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-77 Score=667.50 Aligned_cols=496 Identities=26% Similarity=0.394 Sum_probs=422.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEEC-CeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~ 175 (675)
+|..+.+++++++++..++.+.++|+++.+++|++..|.+++++|+ |++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4556667778888888999999999999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHH
Q 005830 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (675)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (675)
| .+.||||+|||||.|+.|.+||.||+||.+.+|.+.++|+++|.+|.+|++.+++++++ +++++++..++++.+++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 57999999999999999999999999999999999999999999999999999997764 678999999999998766
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEec
Q 005830 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (675)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~D 334 (675)
.+++..++.+++ | ..++.+++++++++|||+|++++|+++..+..+++++||++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~~~~~-~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITFVI-W-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHHH-H-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 555544333222 2 24788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEE
Q 005830 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 335 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv 414 (675)
||||||+|+|++.++.. ..+.+.++++.+++..+..++ ||++.|+++++.............+.+|. +....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~g----~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIPG----IGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEECC----ceEEE
Confidence 99999999999988653 224556788888887776665 99999999876422110011122222221 11111
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCC
Q 005830 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (675)
Q Consensus 415 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~l 494 (675)
..+| ..+..|+++.+.+... . +..+.++|.+++.++.+. +++|++.++|++
T Consensus 356 ---~~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 ---TVEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred ---EECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1245 3456799998654211 1 112346899999988766 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
||+++++|++|++.|++++|+|||+..++..+++++|+. +|++..|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999983 4888899999
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 654 (675)
.++++.++++++.|+|+|||.||++|+++||+||++|++++.++++||+++.+++++.+.+++++||++++++++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHh
Q 005830 655 VSITIRIVVSVPNIL 669 (675)
Q Consensus 655 ~~~n~~~~~~~~~~~ 669 (675)
+.||+..+..+++..
T Consensus 536 ~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 536 FGYNVIAIPIAAGVL 550 (562)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999998766655433
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-77 Score=668.69 Aligned_cols=524 Identities=26% Similarity=0.363 Sum_probs=437.7
Q ss_pred HHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECC-eEEEEEcCCccCC
Q 005830 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVPG 156 (675)
Q Consensus 78 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g-~~~~i~~~~L~~G 156 (675)
+.++++++++++ .|.++.+++++++++..++.++++|+++.++++.+..|+.++|+||| ++++|++++|+||
T Consensus 5 ~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~G 77 (556)
T TIGR01525 5 MALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVG 77 (556)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 344555556554 68889999999999999999999999999999999999999999995 9999999999999
Q ss_pred cEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-
Q 005830 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (675)
Q Consensus 157 Div~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~- 235 (675)
|+|.+++||.|||||+|++| .+.||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|+++|.+|++|++.+++.+.
T Consensus 78 Div~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 156 (556)
T TIGR01525 78 DIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQ 156 (556)
T ss_pred CEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHh
Confidence 99999999999999999999 5799999999999999999999999999999999999999999999999999988775
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcc
Q 005830 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (675)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~ 315 (675)
.+++++++.+++++.+++++++++.++.+++++.. ... .++..++++++++|||+|++++++++..+..+++++|++
T Consensus 157 ~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~-~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gil 233 (556)
T TIGR01525 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL-GAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233 (556)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCce
Confidence 46789999999999887665555444444444332 222 788899999999999999999999999999999999999
Q ss_pred cccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCC--cHHHHHHHHHHccccCcChHHHHHHhhcCChHHH
Q 005830 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKEA 393 (675)
Q Consensus 316 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~ 393 (675)
+|+++++|.++++|++|||||||||+|+|++.++... .+.. .++++.+++..+.... ||++.|+++++......
T Consensus 234 vk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 234 IKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQSSS-HPLARAIVRYAKKRGLE 309 (556)
T ss_pred ecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999886531 1222 5677777776665554 99999999887432100
Q ss_pred hcCCc-EEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCC
Q 005830 394 RAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472 (675)
Q Consensus 394 ~~~~~-~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~ 472 (675)
... . ....+| .+.... ..+|. ..+..|+++.+ +... .. .......++.+..+|+|+++++.+.
T Consensus 310 ~~~-~~~~~~~~----~~gi~~---~~~g~-~~~~lg~~~~~-~~~~--~~-~~~~~~~~~~~~~~g~~~~~v~~~~--- 373 (556)
T TIGR01525 310 LPK-QEDVEEVP----GKGVEA---TVDGQ-EEVRIGNPRLL-ELAA--EP-ISASPDLLNEGESQGKTVVFVAVDG--- 373 (556)
T ss_pred ccc-ccCeeEec----CCeEEE---EECCe-eEEEEecHHHH-hhcC--CC-chhhHHHHHHHhhCCcEEEEEEECC---
Confidence 000 1 111111 111111 12341 24557888876 2111 11 1223345667788999999999865
Q ss_pred cCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCcccccc
Q 005830 473 KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551 (675)
Q Consensus 473 ~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~ 551 (675)
+++|.+.++|++||+++++|+.|+++| ++++|+|||+..++.++++++|+..
T Consensus 374 ----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~----------------- 426 (556)
T TIGR01525 374 ----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE----------------- 426 (556)
T ss_pred ----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-----------------
Confidence 899999999999999999999999999 9999999999999999999999952
Q ss_pred CcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChh
Q 005830 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (675)
Q Consensus 552 ~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~ 631 (675)
+|+++.|++|.++++.++..++.|+|+|||.||++|+++||+|+++|++++.+++.||+++.+++++
T Consensus 427 -------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 427 -------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred -------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHH
Confidence 5899999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 632 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 632 ~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
.+.+++++||++++++++++.|++.+|+..+..++ +++..|
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~-~g~~~p 534 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA-GGLLPL 534 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCH
Confidence 99999999999999999999999999998864443 333334
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-78 Score=667.11 Aligned_cols=508 Identities=30% Similarity=0.405 Sum_probs=432.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCC
Q 005830 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156 (675)
Q Consensus 77 ~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~G 156 (675)
++.++++++++++ .|+++.+++++++++..++.++++|+.+.++++.+..|++++|+|||++++|++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 3455666666654 688888899999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-
Q 005830 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (675)
Q Consensus 157 Div~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~- 235 (675)
|+|.+++||+|||||+|++| .+.||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|++.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 6799999999999999999999999999999999999999999999999999988765
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcc
Q 005830 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (675)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~ 315 (675)
.+++++++.+++++.++++.++++.++.++++++.. .+..++.+++++++++|||+|++++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 467899999999998877666655554444444322 234478889999999999999999999999999999999999
Q ss_pred cccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhc
Q 005830 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (675)
Q Consensus 316 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (675)
+|+++++|+++++|++|||||||||+|+|++.++.. .+++.+++..+... .||++.|+++++....
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~-~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQAS-SHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccC-CCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999987642 26777776655544 4999999998764321
Q ss_pred CCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC
Q 005830 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (675)
Q Consensus 396 ~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~ 475 (675)
.+...+.+|. + .+. ...+|+. +..|+++.+.+... ..+..+|.+++.++.+.
T Consensus 300 ~~~~~~~~~g----~--gi~-~~~~g~~--~~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG----E--GVR-AVVDGGE--VRIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC----C--eEE-EEECCeE--EEEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC------
Confidence 2222222221 1 111 1124543 34688876543210 14556788888887654
Q ss_pred CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcc
Q 005830 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554 (675)
Q Consensus 476 ~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~ 554 (675)
.++|.+.++|++||+++++|+.|+++|+ +++|+|||+..++..+++++|+..
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------------- 404 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------------------- 404 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------------
Confidence 8999999999999999999999999999 999999999999999999999952
Q ss_pred cHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhHH
Q 005830 555 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 555 ~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i 633 (675)
+|++..|++|..+++.++..++.|+|+|||.||++|+++||+||++| ++++.++.+||+++.+++++.+
T Consensus 405 ----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 405 ----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 48889999999999999999999999999999999999999999999 7899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCC
Q 005830 634 ISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSPY 674 (675)
Q Consensus 634 ~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f 674 (675)
.+++.+||++++++++|+.|++.||+..+...+ +++..|+
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~-~G~~~p~ 514 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILLAL-FGVLPLW 514 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccHH
Confidence 999999999999999999999999987655443 3455553
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-76 Score=690.31 Aligned_cols=507 Identities=24% Similarity=0.325 Sum_probs=434.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEec
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g 176 (675)
+|..+.++++++.++.+++...+.|+.+.+++|.+..|++++++|+|++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 44456788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-CCCCchHHHHHHHHHHHHHH
Q 005830 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 255 (675)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (675)
.+.||||+|||||.|+.|.+||.||+||.+.+|.+.++|+++|.+|.++++.++++++ ..++++++..++++.+++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999876 46788999999999887766
Q ss_pred HHHHHHHHHHHHHhccc-cchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEec
Q 005830 256 IAVGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (675)
Q Consensus 256 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~D 334 (675)
++++.++.+++|++... ..|..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+++++|++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 65544444444443221 22566788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEE
Q 005830 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 335 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv 414 (675)
||||||+|+|++.+... ..+.+.++++.+++..+.... ||++.|+++++.+.. ..... +|...... .+
T Consensus 524 KTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~~-----~~~~~~g~-Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQVN-----GFRTLRGL-GV 591 (834)
T ss_pred CCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCcc-----cceEecce-EE
Confidence 99999999999987642 224566778888877776655 999999988753210 01111 22221111 11
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCC
Q 005830 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (675)
Q Consensus 415 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~l 494 (675)
... .+|+ .+.+|+++.+.+.... .+.+...++.+.++|.++++++++. +++|++.+.|++
T Consensus 592 ~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 111 2453 4567999987542211 2345566777889999999999876 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
||+++++|++|++.|++++|+|||+..++..+++++|+.. +|+++.|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHHH
Confidence 9999999999999999999999999999999999999952 6899999999
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 654 (675)
.++++.++.+++.|+|+|||.||++|+++||+||+||++++.++++||++++++++++|..++++||+++++|++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHH
Q 005830 655 VSITIRIVVSVP 666 (675)
Q Consensus 655 ~~~n~~~~~~~~ 666 (675)
+.||+..+..++
T Consensus 782 ~~yn~~~i~~a~ 793 (834)
T PRK10671 782 FIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHH
Confidence 999998876665
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-77 Score=630.16 Aligned_cols=574 Identities=25% Similarity=0.309 Sum_probs=434.6
Q ss_pred cCHHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhh
Q 005830 22 IPIEEVFEQLKCSREGLTS-DEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQD 100 (675)
Q Consensus 22 ~~~~~~~~~l~~~~~GL~~-~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 100 (675)
.|.++.+..+.. .+|+.. .++..-.++||.|....+.+++...|.+....|| ++|++.++..|.+ +.+||+
T Consensus 148 fp~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCL------DeyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCL------DEYWYY 219 (1160)
T ss_pred cCcCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHh------HHHHHH
Confidence 345554544444 357764 4455556679999999999999989999999999 5666666666665 468998
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecC---CCeeeeeEEEEecC
Q 005830 101 FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGD 177 (675)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~---G~~iPaD~~vl~g~ 177 (675)
.++-+++++....--..|+.++-...+. |...|..+.|+|+++|+.+.++||.|||+|.+.. ...||||.++++|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 8887777666655555566555554444 4456788999999999999999999999999977 5679999999999
Q ss_pred CeeEeeccccCCCcccccCCC-----------------Cccccceeeee-------------ceEEEEEEEecchhhhhh
Q 005830 178 PLKIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 227 (675)
Q Consensus 178 ~~~Vdes~LTGEs~pv~K~~~-----------------~~v~aGt~v~~-------------g~~~~~V~~tG~~T~~g~ 227 (675)
+|.|||++|||||.|..|.+- .++|+||++++ |.+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 789999999999999999762 36899999985 569999999999999999
Q ss_pred hhhhhhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------cchHHHHHHHHHHHHHhccCcchHHHHH
Q 005830 228 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSV 300 (675)
Q Consensus 228 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~~iP~~l~~~~~~ 300 (675)
+.+.+.- +++.+.-.. ..+ ++++.+++++++ ..+|.|.. .+-...++-+..++...+|+.||+-+++
T Consensus 378 LvRtilf~aervTaNn~--Etf--~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNR--ETF--IFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred eeeeEEecceeeeeccH--HHH--HHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH
Confidence 8876644 333332111 111 111112221222 22333221 2223345667777888999999999999
Q ss_pred HHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeeccc-------CCCcHHHHHHHHHHc--
Q 005830 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK-------GVEKEHVILLAARAS-- 371 (675)
Q Consensus 301 ~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~-------~~~~~~~l~~~~~~~-- 371 (675)
+...+...|+|.+++|..|-++.-.|+||+.|||||||||+..|.|..+--..... ....+.+..+|++.+
T Consensus 452 AVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 452 AVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred HHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997754211110 112223333433322
Q ss_pred ---cccCcChHHHHHHhhcCChH----------HHhcCCcEEEEecCCccCcceEEEEEcC----CCcEEEEEcCcHHHH
Q 005830 372 ---RTENQDAIDAAIVGMLADPK----------EARAGVREVHFLPFNPVDKRTALTYIDS----DGNWHRASKGAPEQI 434 (675)
Q Consensus 372 ---~~~~~~~~~~ai~~~~~~~~----------~~~~~~~~~~~~~f~~~~k~~sv~~~~~----~g~~~~~~kGa~e~i 434 (675)
..-.+||+++|.++.+.-.- ......++++.+.|+|..|||+++.... +-+++..+|||||.|
T Consensus 532 ~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 532 LLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred HhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 12346999999988763111 1112467788999999999999887532 236889999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCC--------cCCCCCCCCcEEEEEecccCCCCcchHHHHHHHH
Q 005830 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRAL 506 (675)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~--------~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~ 506 (675)
.++.. +.+..+++...+++++|.||++++||+++. -.+++.|++|+|.|++.|..|+|+|++++|+.|+
T Consensus 612 ~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 612 QEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred HHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 98875 567889999999999999999999999973 2478899999999999999999999999999999
Q ss_pred hCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCc--------------cC----------------CccccccCcc--
Q 005830 507 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--------------LG----------------QDKDASIAAL-- 554 (675)
Q Consensus 507 ~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~--------------~~----------------~~~~~~~~~~-- 554 (675)
+++++++|+||||+.||.++|+++||.......-.. .+ ...+.++.+.
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 999999999999999999999999996541110000 00 0001122222
Q ss_pred -------cHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCcc
Q 005830 555 -------PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADAT 614 (675)
Q Consensus 555 -------~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~ 614 (675)
.+..++....||||+.|.||..++..+++.|+.++|||||.||++|||+||||||+-+++
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~ 835 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNP 835 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCC
Confidence 334455667899999999999999999999999999999999999999999999996443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-75 Score=662.47 Aligned_cols=618 Identities=19% Similarity=0.233 Sum_probs=481.9
Q ss_pred HHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHh
Q 005830 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (675)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 121 (675)
+...|-.|.+.+.||+++ +++++||.++.|++|++.++++++. .. +...|...+++++++.++.+.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999999875 7889999999999999999999986 22 3456677788888999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEECCe-EEEEEcCCccCCcEEEecCCCeeeeeEEEEecC----CeeEeeccccCCCcccccC
Q 005830 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (675)
Q Consensus 122 ~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~----~~~Vdes~LTGEs~pv~K~ 196 (675)
+++...+++ ..+++|.|++. +++..|++|++||+|++..++.+|||.++++++ .|+|++++|+||++.+.|.
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 998887654 47888988543 899999999999999999999999999999653 4999999999999988774
Q ss_pred C-----------------------------------------------CCccccceeeeece-EEEEEEEecchhhhhhh
Q 005830 197 P-----------------------------------------------YDEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (675)
Q Consensus 197 ~-----------------------------------------------~~~v~aGt~v~~g~-~~~~V~~tG~~T~~g~~ 228 (675)
. .+.++.|+++.+.. +.+.|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 13467788888765 89999999999987653
Q ss_pred hhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc---c--------c-----chHHHHHHHHHHHHHhc
Q 005830 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIM--YPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (675)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~---~--------~-----~~~~~~~~~~~ll~~~i 290 (675)
. -..+.+++.+++.++.....++++.+..+++..+.. |... . . .....+..++.++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 223346778888888876654443333333222221 1110 0 0 11234566778888999
Q ss_pred cCcchHHHHHHHHHHHHHHhh----------cCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCc
Q 005830 291 PIAMPTVLSVTMAIGSHRLSQ----------QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (675)
Q Consensus 291 P~~l~~~~~~~~~~~~~~l~~----------~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~ 360 (675)
|.+|++.+.+....++..+.+ ....+|+.+..|+||+|++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 999999999999888744332 3678999999999999999999999999999999998877543322211
Q ss_pred H--------------------------------------------HHHHHHHHHc-------------cccCcChHHHHH
Q 005830 361 E--------------------------------------------HVILLAARAS-------------RTENQDAIDAAI 383 (675)
Q Consensus 361 ~--------------------------------------------~~l~~~~~~~-------------~~~~~~~~~~ai 383 (675)
. +.....+.+. .....+|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 1111111111 011236777777
Q ss_pred HhhcCCh----------------HHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhcc-CChHHHH
Q 005830 384 VGMLADP----------------KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (675)
Q Consensus 384 ~~~~~~~----------------~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~-~~~~~~~ 446 (675)
+..+.+. ......|+.++.++|+|.||||||+++.++|+..+|||||+..|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7654321 0113478899999999999999999999999999999999999999998 4556778
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeccCCcCC-------------------------CCCCCCcEEEEEecccCCCCcchHHH
Q 005830 447 KVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAET 501 (675)
Q Consensus 447 ~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~d~lr~~~~~~ 501 (675)
+..+++++|+.+|+|++++|||.++++++ +.+|+||+++|.+++||+|+++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88899999999999999999999987652 35799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCc-----------------------------------
Q 005830 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD----------------------------------- 546 (675)
Q Consensus 502 i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~----------------------------------- 546 (675)
|+.|++||||+||+|||+.+||.++|..|++..+.+..-.+....
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 999999999999999999999999999999976533211110000
Q ss_pred -cccccCcccHH------------HHh--hhcCEEEecCHHHHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCccEEc
Q 005830 547 -KDASIAALPVD------------ELI--EKADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 547 -~~~~~~~~~~~------------~~~--~~~~v~~r~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
...-.++..+. ++. .+..++||++|.||+.+|+..++. +.++++||||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 00001111111 111 134589999999999999999754 88999999999999999999999999
Q ss_pred C--CccHHHHhccCEEecCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCC
Q 005830 611 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSPY 674 (675)
Q Consensus 611 ~--~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f 674 (675)
+ +|.+++. +||+.+.. |.-+-+++ -+||..|.|+.+.+.|.++.|+.+++..|+|.++++|
T Consensus 820 sG~EGmQAvm-sSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gf 883 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGF 883 (1151)
T ss_pred ccchhhhhhh-cccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 5 6766666 99999955 65565554 5699999999999999999999999999999999987
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-74 Score=597.70 Aligned_cols=595 Identities=22% Similarity=0.277 Sum_probs=448.8
Q ss_pred HHHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC-CchhhHHHHHHHHHHHHHHHHHHH
Q 005830 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRD-PDWQDFVGIIVLLVINSTISFIEE 119 (675)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~ 119 (675)
.++++|.+|.+...+|+++ ..+++||..++|++|+++++.+++.....+.. .+|.++.+++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999988754 56788999999999999999988755433322 344444455555555545555554
Q ss_pred HhHHHHHHHHHhcCCCeEEE-EECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecC----CeeEeeccccCCCcccc
Q 005830 120 NNAGNAAAALMANLAPKTKV-LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (675)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V-~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~----~~~Vdes~LTGEs~pv~ 194 (675)
+++.+ ..+ .....+ -|+|...+ |++++++||+|.+..+++||||.++++.+ +|.|.+-.|+||+..+.
T Consensus 154 ~~rd~---~~N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDR---ELN---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhh---hhh---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 44443 322 234444 46766544 99999999999999999999999999532 68999999999997665
Q ss_pred cCC-----------------------------------------------CCccccceeeeeceEEEEEEEecchhhhhh
Q 005830 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (675)
Q Consensus 195 K~~-----------------------------------------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~ 227 (675)
|-| .|.++++|.+.+|.+.|+|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 532 2678999999999999999999999952
Q ss_pred hhhhhhcc---CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 005830 228 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (675)
Q Consensus 228 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 304 (675)
.+..+ .+...++..+|.+.++++..++++.++ +...-..+..|...+.+++.++...+|++|-+.+.++...
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 23322 255667777888888765544443332 1222234578889999999999999999999999999999
Q ss_pred HHHHHhhc----CcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCc--------------------
Q 005830 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (675)
Q Consensus 305 ~~~~l~~~----~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~-------------------- 360 (675)
.++.+.++ |.++|+...-|+||++.++.+|||||||+|+|.+++++.....++.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 98888775 678999999999999999999999999999999999876533222111
Q ss_pred ---------------HHHHHHHHHHcccc-----------CcChHHHHHHhhcCC-----------------hHHHhcCC
Q 005830 361 ---------------EHVILLAARASRTE-----------NQDAIDAAIVGMLAD-----------------PKEARAGV 397 (675)
Q Consensus 361 ---------------~~~l~~~~~~~~~~-----------~~~~~~~ai~~~~~~-----------------~~~~~~~~ 397 (675)
+.+..++.+....+ ..+|.+.|++++.+. +......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 11222222211111 124555565554321 11123468
Q ss_pred cEEEEecCCccCcceEEEEEcC-CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCC
Q 005830 398 REVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKE 476 (675)
Q Consensus 398 ~~~~~~~f~~~~k~~sv~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~ 476 (675)
++++.+||+|+.|||++++++. .++...|.|||+..|....+ ..+++++...+|+++|+|++.+|.|.+++++++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 8999999999999999999986 68999999999999887665 347888889999999999999999999877521
Q ss_pred --------------------------CCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 477 --------------------------SPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 477 --------------------------~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
.+|++|+++|+.+.||+++++++.+++.||+|||++||+|||+.+||..+|+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 468999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcc----------------CC-ccccccCcccHH-----------HHhh--hcCEEEecCHHHHHHHHHH
Q 005830 531 GMGTNMYPSSSLL----------------GQ-DKDASIAALPVD-----------ELIE--KADGFAGVFPEHKYEIVKR 580 (675)
Q Consensus 531 gi~~~~~~~~~~~----------------~~-~~~~~~~~~~~~-----------~~~~--~~~v~~r~~p~~K~~iv~~ 580 (675)
++.+.......+. .. ....-++++.++ ++.. ...++||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 9865432211110 00 000012233322 2221 2458999999999999999
Q ss_pred HHhC-CCEEEEECCCccCHHHHHhCCccEEc-C-CccHHHHhccCEEecCCChhHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 005830 581 LQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTIYAVS 656 (675)
Q Consensus 581 l~~~-~~~v~~iGDg~ND~~al~~A~vgia~-~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~-gr~~~~~i~~~i~~~~~ 656 (675)
+|+. |..|++||||.||+.|+++||+||++ | +|.++.. |||+.+. .|+.+-+++.+ ||..|++-.+.-+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 88999999999999999999999999 5 5666554 9999995 49999998876 99999999988887654
Q ss_pred HhHH
Q 005830 657 ITIR 660 (675)
Q Consensus 657 ~n~~ 660 (675)
...+
T Consensus 853 RGL~ 856 (1051)
T KOG0210|consen 853 RGLI 856 (1051)
T ss_pred hhHH
Confidence 4443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-64 Score=508.82 Aligned_cols=521 Identities=25% Similarity=0.358 Sum_probs=400.1
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----cCC--CCCCchhhH-HHHHHH-HHHHHHHHHHHHHhHHHHHHHHHhcC-CCeEEE
Q 005830 69 FMWNPLSWVMEAAAIMAIALA----NGG--GRDPDWQDF-VGIIVL-LVINSTISFIEENNAGNAAAALMANL-APKTKV 139 (675)
Q Consensus 69 ~~~~~~~~~~~~~~i~~~~~~----~~~--~~~~~~~~~-~~i~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~V 139 (675)
+.+||..|+.++.+++..++. ..+ +....|+.. ..++++ +++..+-+.+.|-|.+.+-+.|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 356888777666666665322 111 111122211 122222 23333344455545444444554422 335666
Q ss_pred EEC-CeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC---CccccceeeeeceEEEE
Q 005830 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (675)
Q Consensus 140 ~r~-g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~---~~v~aGt~v~~g~~~~~ 215 (675)
+++ |.++.+++.+|+.||+|.+++||.||+||.|++| ...||||.+||||.||.|++| +.|-.||++++..+..+
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 665 8999999999999999999999999999999999 679999999999999999999 77999999999999999
Q ss_pred EEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcc
Q 005830 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (675)
Q Consensus 216 V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l 294 (675)
++....+|.+.|+..+++.++ +++|-+--++.+..-+.+ +++...+ .+..+..+...-...+...+.++++.+|-.+
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTl-iFL~~~~-Tl~p~a~y~~g~~~~i~~LiALlV~LIPTTI 265 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTL-IFLLAVA-TLYPFAIYSGGGAASVTVLVALLVCLIPTTI 265 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHH-HHHHHHH-hhhhHHHHcCCCCcCHHHHHHHHHHHhcccH
Confidence 999999999999999998774 455544333322211111 1111111 1111111110112345677889999999999
Q ss_pred hHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHcccc
Q 005830 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (675)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 374 (675)
.-.++..-..++.|+.+.|++.++++++|.+|.||++..|||||+|-|+-.-+++.. ..+.+.+++...+..++...
T Consensus 266 GgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl~D 342 (681)
T COG2216 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASLAD 342 (681)
T ss_pred HHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhhcc
Confidence 999998888899999999999999999999999999999999999999877766552 45777888777776665444
Q ss_pred CcChHHHHHHhhcCChH-HHh-cCCc-EEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCCh-HHHHHHHH
Q 005830 375 NQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHA 450 (675)
Q Consensus 375 ~~~~~~~ai~~~~~~~~-~~~-~~~~-~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~-~~~~~~~~ 450 (675)
+.|..++++..+.... +.+ .... .....||+...+++.+-. .++ ..+.|||.+.+.+..+... ..++.++.
T Consensus 343 -eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~ 417 (681)
T COG2216 343 -ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDA 417 (681)
T ss_pred -CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHH
Confidence 3787888877654221 111 1111 346789987665544322 223 5678999999998876433 37788999
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
..++-++.|-..++++... +++|++.++|-+|||.+|-+.+||+.||+.+|+||||+.||..+|++.
T Consensus 418 ~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA 484 (681)
T COG2216 418 AVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 484 (681)
T ss_pred HHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh
Confidence 9999999999999999887 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 531 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
|.+. ..++++|++|.++|+.-|.+|+.|+|+|||.||+|||.+||||+||
T Consensus 485 GVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 485 GVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred Cchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh
Confidence 9863 4889999999999999999999999999999999999999999999
Q ss_pred CCccHHHHhccCEEecCCChhHHHHHHHHHHHH
Q 005830 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAI 643 (675)
Q Consensus 611 ~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~ 643 (675)
.+|+++||+++..|=+|+|...+.+.++.|+++
T Consensus 535 NsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 535 NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred ccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 999999999999999999999999999999974
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=301.70 Aligned_cols=220 Identities=36% Similarity=0.527 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCe-EEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe-cCCeeE
Q 005830 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKI 181 (675)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~-g~~~~V 181 (675)
+++++++..++++++++++++..+++++..+++ ++|+|||+++++++++|+|||+|.|++||.+||||+|++ | .+.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-cccc
Confidence 566778888899999999999999998888887 899999999999999999999999999999999999999 7 8999
Q ss_pred eeccccCCCcccccC-----CCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHH
Q 005830 182 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (675)
Q Consensus 182 des~LTGEs~pv~K~-----~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (675)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..+++.+.....+ +++++++.++++..++..+
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999887765 4588999999999887665
Q ss_pred HHHHHHHHHHHHHh-ccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhh
Q 005830 256 IAVGIVAEIIIMYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (675)
Q Consensus 256 i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~ 324 (675)
+++++++.+++++. ....+|...+..++++++++||++||+++++++..++.++.++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 55544444433333 2567788899999999999999999999999999999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=222.35 Aligned_cols=211 Identities=31% Similarity=0.398 Sum_probs=152.6
Q ss_pred ceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCc
Q 005830 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (675)
Q Consensus 328 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~ 407 (675)
|++||||||||||++++.+. . .+...++..+...+.... ||++.++..+....... ....... .
T Consensus 1 i~~i~fDktGTLt~~~~~v~------~---~~~~~~~~~~~~~~~~s~-~p~~~~~~~~~~~~~~~-~~~~~~~-----~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA------P---PSNEAALAIAAALEQGSE-HPIGKAIVEFAKNHQWS-KSLESFS-----E 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE------S---CSHHHHHHHHHHHHCTST-SHHHHHHHHHHHHHHHH-SCCEEEE-----E
T ss_pred CeEEEEecCCCcccCeEEEE------e---ccHHHHHHHHHHhhhcCC-Ccchhhhhhhhhhccch-hhhhhhe-----e
Confidence 68999999999999999991 1 455666666665555554 99999998876543222 1111111 1
Q ss_pred cCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEE
Q 005830 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (675)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 487 (675)
...++..... ++. +. |+++.+.+..... .............|.+.+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1112111111 122 22 8888876644311 1111222223455656666664 3489999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE
Q 005830 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (675)
Q Consensus 488 i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (675)
+.+.|++|++++++|+.|+++|++++|+|||+..++.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred ec--CHHHH--HHHHHHHHhCCCEEEEECCCccCHHHHHhCC
Q 005830 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (675)
Q Consensus 568 r~--~p~~K--~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 605 (675)
++ +|++| .++++.++.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-15 Score=127.93 Aligned_cols=124 Identities=25% Similarity=0.383 Sum_probs=109.8
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhh
Q 005830 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (675)
Q Consensus 483 ~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (675)
...+.++---++=++++++|++|++. +++++.|||..-+....|+-.||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56788888889999999999999999 99999999999999999999998643
Q ss_pred cCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc-C--CccHHHHhccCEEecCCChhHHHHHH
Q 005830 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 563 ~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~-~--~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
++|+...|+.|..+++.|+++++.|.|+|||.||.+||++||+||.. + +.++.+..+||+++- +...+++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl~ 146 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDLL 146 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHHh
Confidence 57999999999999999999999999999999999999999999987 4 567778899999984 455555543
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.38 E-value=1e-12 Score=103.80 Aligned_cols=67 Identities=36% Similarity=0.534 Sum_probs=61.0
Q ss_pred ccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-cccHHHHHHHHHHhHHHHHHHHHHHHH
Q 005830 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEAAAIMA 85 (675)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~ 85 (675)
||.++.+++++.|+++ .+||+++|+.+|+++||+|.++.+ ++++|..|+++|.+|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999977 899999999999999999999655 578889999999999999999988875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.2e-10 Score=115.27 Aligned_cols=131 Identities=18% Similarity=0.248 Sum_probs=98.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE-ecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-GVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-r~~p 571 (675)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+.-.+..+... + .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt----g----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT----G----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE----e----------EecCccCCc
Confidence 47899999999999999999999999988888999999985321100000000000 0 0000 0224
Q ss_pred HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+.|.+.++.+.++ ...|+++|||.||.+|++.|++|||+ ++.+..++.||.++...++.++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888777654 35799999999999999999999999 888999999999999999999887763
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.2e-09 Score=109.07 Aligned_cols=153 Identities=24% Similarity=0.305 Sum_probs=105.7
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCcc-----CCc------------
Q 005830 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-----GQD------------ 546 (675)
Q Consensus 486 G~i~~~d~-lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~-----~~~------------ 546 (675)
|.+.-.|. +.+.+.++|+++++.|++++++||++...+..+++.+|+..... .+.... +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 44444444 78899999999999999999999999999999999999853221 111000 000
Q ss_pred -----------------cccc--------cCc---ccHHHHhhhcC--E-------EEecCHH--HHHHHHHHHHhC---
Q 005830 547 -----------------KDAS--------IAA---LPVDELIEKAD--G-------FAGVFPE--HKYEIVKRLQER--- 584 (675)
Q Consensus 547 -----------------~~~~--------~~~---~~~~~~~~~~~--v-------~~r~~p~--~K~~iv~~l~~~--- 584 (675)
.... ... ..+...+++.. + +....|. .|..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 0000 000 11122222111 1 1233333 377777766553
Q ss_pred -CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 585 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 585 -~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+++.+++-+++.++|+
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 346999999999999999999999999999999999999999999999998875
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-09 Score=104.82 Aligned_cols=131 Identities=15% Similarity=0.129 Sum_probs=97.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+++|++.+.|+.+++.| ++.++||.....+..+++++|+.........+.... ..++. ....++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~tG~------------~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RVVGY------------QLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---eeECe------------eecCcc
Confidence 57999999999999975 999999999999999999999964221110000000 00000 013477
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
.|...++.+++.+..+.++|||.||.+|++.||+||++.......+.+-|+-.. .+.+.+...+.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 899999999888888999999999999999999999998555555544455444 4688888888765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.7e-10 Score=86.39 Aligned_cols=59 Identities=42% Similarity=0.713 Sum_probs=53.3
Q ss_pred HcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005830 30 QLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (675)
Q Consensus 30 ~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (675)
.|+++ ..|||++|+.+|+++||+|+++.++ .++|..++++|++|+.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 46777 5599999999999999999999886 77889999999999999999999999875
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.7e-09 Score=108.86 Aligned_cols=154 Identities=21% Similarity=0.221 Sum_probs=108.3
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-CCCc---------------------
Q 005830 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SSSL--------------------- 542 (675)
Q Consensus 486 G~i~~~d~-lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~~~--------------------- 542 (675)
|.+.-.+. +.+.++++|+++++.|++++++||++...+..+.+++|+...... +...
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999999641110 0000
Q ss_pred --------------cC-C-------c---c-------------------------ccccCcccHHHHh---hh-----cC
Q 005830 543 --------------LG-Q-------D---K-------------------------DASIAALPVDELI---EK-----AD 564 (675)
Q Consensus 543 --------------~~-~-------~---~-------------------------~~~~~~~~~~~~~---~~-----~~ 564 (675)
.. . . . ......+...+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 00 0 0 0 0000001111111 11 11
Q ss_pred EE-------EecCH--HHHHHHHHHHHhC-CC---EEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChh
Q 005830 565 GF-------AGVFP--EHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (675)
Q Consensus 565 v~-------~r~~p--~~K~~iv~~l~~~-~~---~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~ 631 (675)
.+ ...+| .+|...++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+++.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 23333 3788888887763 43 499999999999999999999999999999999999998999999
Q ss_pred HHHHHHHH
Q 005830 632 VIISAVLT 639 (675)
Q Consensus 632 ~i~~~i~~ 639 (675)
++.++|+.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998864
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.1e-09 Score=110.05 Aligned_cols=66 Identities=23% Similarity=0.225 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|..-++.+.+. ...|+++|||.||.+||+.|++|+||+|+.+.+|+.||+|+.+++-+++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666543 356999999999999999999999999999999999999999999999998885
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=107.63 Aligned_cols=144 Identities=20% Similarity=0.269 Sum_probs=100.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCcc-C--Cc------ccc-------------
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-G--QD------KDA------------- 549 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~-~--~~------~~~------------- 549 (675)
++.+.+.++|++|++.|++++++||++...+..+++.+++..... .+..+. . .. ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999863211 111000 0 00 000
Q ss_pred --------------ccCc---ccHHHHhhhcCE-------EEecC--HHHHHHHHHHHHhC----CCEEEEECCCccCHH
Q 005830 550 --------------SIAA---LPVDELIEKADG-------FAGVF--PEHKYEIVKRLQER----KHICGMTGDGVNDAP 599 (675)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~v-------~~r~~--p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ 599 (675)
.... ..+...+....+ +..++ ..+|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 011111221111 11222 34788888777653 335999999999999
Q ss_pred HHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHH
Q 005830 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 600 al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
|++.|+.|++|+++.+.+++.||+++.+++-+++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988888887765
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=111.90 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=100.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCcc----------------------------
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL---------------------------- 543 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~---------------------------- 543 (675)
.+.+.++++|+++++.|+++++.||++...+..+.+++|+..... .+....
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999853211 000000
Q ss_pred --------CC-------ccc-----------------ccc------------CcccHHH---Hhhh-----cCE------
Q 005830 544 --------GQ-------DKD-----------------ASI------------AALPVDE---LIEK-----ADG------ 565 (675)
Q Consensus 544 --------~~-------~~~-----------------~~~------------~~~~~~~---~~~~-----~~v------ 565 (675)
.. ... ... ..+.+++ .+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00 000 000 0000011 0100 001
Q ss_pred EEecCHH--HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCE--EecCCChhHHHHHH
Q 005830 566 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAV 637 (675)
Q Consensus 566 ~~r~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~--vl~~~~~~~i~~~i 637 (675)
+..++|. .|..-++.+.+. ...|+++|||.||.+||+.|+.||||+|+.+.+|++||+ ++.+++-+++.++|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1123333 577777777654 346999999999999999999999999999999999986 77788899999888
Q ss_pred H
Q 005830 638 L 638 (675)
Q Consensus 638 ~ 638 (675)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 5
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.3e-09 Score=109.46 Aligned_cols=66 Identities=20% Similarity=0.222 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC--EEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad--~vl~~~~~~~i~~~i~ 638 (675)
.|..-++.+.+. ...|+++||+.||.+||+.|+.|+||+|+.+.+|+.|| .|+.+++-+++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 476666666543 24699999999999999999999999999999999987 7888888999988875
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.6e-09 Score=98.22 Aligned_cols=104 Identities=18% Similarity=0.214 Sum_probs=84.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--cCHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--VFPEHKYEI 577 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~p~~K~~i 577 (675)
.+|+.|+++|+++.++|+.+...+....+.+|+... |.. -.|+-...+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 579999999999999999999999999999998531 111 234555555
Q ss_pred HHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHH
Q 005830 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 578 v~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i 633 (675)
++.+.-....|+++||+.||.+|++.|+++++|+++.+.++..|++|+..++-.+.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 56555445679999999999999999999999999999999999999876554443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.8e-09 Score=103.64 Aligned_cols=146 Identities=23% Similarity=0.288 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCc--------------cCCc-----------
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSL--------------LGQD----------- 546 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~--------------~~~~----------- 546 (675)
.+.+.+.++|+++++.|++++++||++...+..+.+.+|+..... .+... ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999643211 00000 0000
Q ss_pred -cc-------------c---ccCcccHHHHhhhcC---------EEEecCH--HHHHHHHHHHHhC----CCEEEEECCC
Q 005830 547 -KD-------------A---SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER----KHICGMTGDG 594 (675)
Q Consensus 547 -~~-------------~---~~~~~~~~~~~~~~~---------v~~r~~p--~~K~~iv~~l~~~----~~~v~~iGDg 594 (675)
.. . ....+.+..+++... .+....| .+|..-++.+.+. ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0 000011111222111 1122333 3787777777653 3569999999
Q ss_pred ccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhH----HHHHHH
Q 005830 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 638 (675)
Q Consensus 595 ~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~ 638 (675)
.||.+|++.|++|+||+|+.+.+|+.||+|..+++-.+ +.+.|+
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665553
|
catalyze the same reaction as SPP. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.7e-09 Score=95.96 Aligned_cols=107 Identities=25% Similarity=0.321 Sum_probs=82.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--cCHHHHHHHH
Q 005830 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--VFPEHKYEIV 578 (675)
Q Consensus 501 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~p~~K~~iv 578 (675)
+|++|++.|+++.++||++...+..+.+.+|+... |.. ..|+-...++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~~~k~~~~~~~~ 85 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQSNKLIAFSDIL 85 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------EecccchHHHHHHHH
Confidence 89999999999999999999999999999998532 111 1122223333
Q ss_pred HHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhH-HHHHH
Q 005830 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 637 (675)
Q Consensus 579 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~-i~~~i 637 (675)
+.+.-....++|+||+.||.+|++.|++++++.++.+..+..||+++..+.-.+ +.+++
T Consensus 86 ~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 86 EKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 333323467999999999999999999999999888899999999998665333 44443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=101.16 Aligned_cols=129 Identities=20% Similarity=0.233 Sum_probs=92.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~p 571 (675)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.......-........ . .+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~----~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT----G----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE----E----------EecCcccCC
Confidence 57999999999999999999999999999999999999986421000000000000 0 00001 112
Q ss_pred HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHH
Q 005830 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 572 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
..|..+++.+.++ ...++++||+.+|.+|++.|+++++++ +.+..+++||+++.++++..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3366666655443 246899999999999999999999985 567888899999999998887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.2e-09 Score=105.01 Aligned_cols=147 Identities=18% Similarity=0.200 Sum_probs=101.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCcc--------------------------
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-------------------------- 543 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~-------------------------- 543 (675)
...+.+.+.++|++++++|+++++.||++...+..+..++++..... .+....
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577999999999999999999999999999999999999862111 000000
Q ss_pred ----------------CCc---cc-----------------------------cccCcccHHHH-------hhhcCEEE-
Q 005830 544 ----------------GQD---KD-----------------------------ASIAALPVDEL-------IEKADGFA- 567 (675)
Q Consensus 544 ----------------~~~---~~-----------------------------~~~~~~~~~~~-------~~~~~v~~- 567 (675)
... .. ...+.+.++.+ ......+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 000 00 00000111111 11110111
Q ss_pred ------ecCH--HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHH
Q 005830 568 ------GVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 568 ------r~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
.++| ..|..-++.+.+. ...++++||+.||.+||+.|+.|+||+++++..+..||+++...+-.++.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 2333 4788888777652 457999999999999999999999999999999999999999877788887
Q ss_pred HH
Q 005830 636 AV 637 (675)
Q Consensus 636 ~i 637 (675)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 65
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.6e-08 Score=103.54 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhC-C---CEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~-~---~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466656555433 3 46999999999999999999999999999999999999999999999998885
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.4e-08 Score=112.61 Aligned_cols=66 Identities=23% Similarity=0.311 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhC-C---CEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~-~---~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|..-++.+.+. | ..|+++|||.||.+||+.|+.||||+||.+.+|+.||+|+.+++-+++.++|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344444444433 2 36999999999999999999999999999999999999999999999998885
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.8e-08 Score=96.84 Aligned_cols=119 Identities=19% Similarity=0.181 Sum_probs=86.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~ 570 (675)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+............+.. .-.+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~l--------------tG~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKL--------------TGRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEE--------------eceeeeeecC
Confidence 57899999999999999999999999999999999999999753222111110000 0012333 34
Q ss_pred HHHHHHHHHHHHhC-CC---EEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEe
Q 005830 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 625 (675)
Q Consensus 571 p~~K~~iv~~l~~~-~~---~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl 625 (675)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.++++..... .+..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHhc
Confidence 57888888666553 44 59999999999999999999999975433 344555544
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.1e-08 Score=83.65 Aligned_cols=64 Identities=33% Similarity=0.484 Sum_probs=52.8
Q ss_pred CcChHHHHHHhhcC------ChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhcc
Q 005830 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN 439 (675)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~ 439 (675)
.++|.+.|++.++. +....+..+++++.+||+|.+|+|+++++ .++.+.+++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 34788888887663 23456778999999999999999999998 334577799999999999997
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.5e-08 Score=86.64 Aligned_cols=116 Identities=22% Similarity=0.348 Sum_probs=92.3
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (675)
-.|+.|+++|+++-++||++...+..-|+++||..- -.--.+|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~--------------------------------~qG~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL--------------------------------YQGISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee--------------------------------eechHhHHHHHH
Confidence 478999999999999999999999999999999531 112356777666
Q ss_pred HHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCC----hhHHHHHHHHHHHHHHHH
Q 005830 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRM 647 (675)
Q Consensus 580 ~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gr~~~~~i 647 (675)
.|.++ ...|+++||..||.|+|+..++++|+.++.+..++.||+|+.... ...+.++|..++..++-.
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~ 165 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEA 165 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHH
Confidence 66543 457999999999999999999999999999999999999997654 344455666565554443
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.2e-08 Score=92.21 Aligned_cols=111 Identities=23% Similarity=0.321 Sum_probs=83.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (675)
.+|+.|++.|+++.++||.+...+..+++++|+... |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 689999999999999999999999999999998531 11 1123444443
Q ss_pred HH-Hh---CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCC----hhHHHHHHHHHHH
Q 005830 580 RL-QE---RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRA 642 (675)
Q Consensus 580 ~l-~~---~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gr~ 642 (675)
.+ ++ ....|+|+||+.||.+|++.|+++++++++.+..+..||+++..+. ...+.+.+...|-
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 33 22 2457999999999999999999999998888888889999996443 3444555544443
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.9e-05 Score=83.47 Aligned_cols=186 Identities=18% Similarity=0.229 Sum_probs=125.6
Q ss_pred cEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-----------CCCCCCc-------c
Q 005830 482 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-----------MYPSSSL-------L 543 (675)
Q Consensus 482 l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----------~~~~~~~-------~ 543 (675)
-.|.|++....+.+++....|+.|-++-|+.+-.|-.+....+-.|.++||... ..|.... .
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 468999999999999999999999999999999999999999999999998531 1111100 0
Q ss_pred C---------------Ccccc---------------ccC--------cccHHHH----------hh-------hcCEEEe
Q 005830 544 G---------------QDKDA---------------SIA--------ALPVDEL----------IE-------KADGFAG 568 (675)
Q Consensus 544 ~---------------~~~~~---------------~~~--------~~~~~~~----------~~-------~~~v~~r 568 (675)
+ +.+-. .++ ......+ ++ -...|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0 00000 000 0000000 00 1125889
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHH--HHHhCCccEEcCC--c-----------cHH-HHhccC----------
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAP--ALKKADIGIAVAD--A-----------TDA-ARSASD---------- 622 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~--al~~A~vgia~~~--~-----------~~~-a~~~ad---------- 622 (675)
++|+.-.++|+.+|+.|++|+.+|...|--. .+-+||++|++.. . +.. ..++.|
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 9999999999999999999999999988543 3457899998741 1 111 112233
Q ss_pred -------EEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 005830 623 -------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPN 667 (675)
Q Consensus 623 -------~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 667 (675)
+-+.....-.+..+|+-+|....-+|+.+.|.+.....+.+..+.
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~fl 1106 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFL 1106 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 222222344667888889999999999999988887666544433
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.68 E-value=2e-07 Score=94.60 Aligned_cols=66 Identities=20% Similarity=0.219 Sum_probs=53.1
Q ss_pred HHHHHHHHHHh----C--CCEEEEECCCccCHHHHHhCCccEEcCCcc---HHHHhc--c-CEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE----R--KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~----~--~~~v~~iGDg~ND~~al~~A~vgia~~~~~---~~a~~~--a-d~vl~~~~~~~i~~~i~ 638 (675)
.|..-++.+.+ . ...++++||+.||.+|++.|+.||||+|+. +..|+. | ++|..+++-+++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 45555555543 2 457999999999999999999999999887 468876 4 58888899999998875
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.6e-08 Score=98.11 Aligned_cols=64 Identities=25% Similarity=0.287 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
.|..-++.+.+. ...++++||+.||.+|++.|+.|++|+++.+.+++.||+++.+++-+++.++
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588778777664 3469999999999999999999999999999999999999998888888764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.4e-07 Score=90.52 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE--ecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~~ 570 (675)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.......-...... .+.. ...
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-----------------~i~~~~~~~ 129 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-----------------MITGYDLRQ 129 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC-----------------eEECccccc
Confidence 4579999999999999 9999999999999999999999853211100000000 0000 123
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCE-EecCCChhHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~-vl~~~~~~~i~~~i 637 (675)
|..|...++.++..+..++|+|||.||.+|.++|++|+..+...+.....++. ++ +++..+.+.+
T Consensus 130 p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 130 PDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred cchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 67888899999888889999999999999999999999887544444445665 44 5577766554
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.2e-07 Score=92.97 Aligned_cols=66 Identities=21% Similarity=0.162 Sum_probs=51.8
Q ss_pred HHHHHHHHHHh-------CCCEEEEECCCccCHHHHHhCCccEEcCCcc-HH-----HHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~-------~~~~v~~iGDg~ND~~al~~A~vgia~~~~~-~~-----a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|..-++.+.+ ....|+++||+.||.+||+.|++||||+++. +. .+..+|+++...+-+++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 56655555543 3457999999999999999999999998544 21 3457999999999999998875
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.9e-07 Score=87.40 Aligned_cols=117 Identities=25% Similarity=0.343 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+++|++.+.++.|++.|+++.++|+.....+..+++.+|+..... ....... .... .-..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~-~~~~~~~--~g~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS-NELVFDE--KGFI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE-EEEEEcC--CCeE----------ecceeeEEccc
Confidence 578999999999999999999999999999999999999753110 0000000 0000 00012223455
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad 622 (675)
.|...++.+.++ ...++++||+.||.+|++.||++++++.+....+.++|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 676666665443 34699999999999999999999999765555555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.7e-06 Score=88.64 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=54.1
Q ss_pred HHHHHHHHHHh----CC-CEEEEECCCccCHHHHHhCCccEEcCCccHHHH----hcc-CEEe--cCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~----~~-~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~----~~a-d~vl--~~~~~~~i~~~i~ 638 (675)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+|+.+.+| .+| +.+. ..++-+++.++|+
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666655543 35 789999999999999999999999999999988 666 6777 5667889888875
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.3e-06 Score=85.86 Aligned_cols=136 Identities=13% Similarity=0.057 Sum_probs=87.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCcc-CCccccccCcccHHHHhhhcCEE--Ee
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-GQDKDASIAALPVDELIEKADGF--AG 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~--~r 568 (675)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....+..+.... ++...... .....+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~---------p~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW---------PHPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC---------CCCCcccccc
Confidence 4689999999999999999999999999988888888775433221111111 11000000 000000 00
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHH--hccCEEecCCChhHHHHHHH
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~--~~ad~vl~~~~~~~i~~~i~ 638 (675)
.....|..+++.++..+..++|+|||.||.+|++.||+.++-+.-.+..+ ..+.+.. ++|..+...++
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 01246899999998888889999999999999999999887542112112 1222222 56777776654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.4e-07 Score=83.88 Aligned_cols=102 Identities=24% Similarity=0.272 Sum_probs=75.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCc--------cCCccccccCcccHHHHhhhcC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--------LGQDKDASIAALPVDELIEKAD 564 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 564 (675)
.+-|++++.++.|++.|.+++++||.-...+..+|.++||+........+ .+.+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------------- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------------- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------------
Confidence 46799999999999999999999999999999999999997522111111 1100000
Q ss_pred EEEecCHHHHHHHHHHHHhC--CCEEEEECCCccCHHHHHhCCccEEcC
Q 005830 565 GFAGVFPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (675)
Q Consensus 565 v~~r~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~vgia~~ 611 (675)
.-.....|.+++..+++. -..++|||||+||.+|+..||.=|+.+
T Consensus 153 --ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 --PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred --ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 001134789999988874 347999999999999999988777775
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.9e-06 Score=82.52 Aligned_cols=126 Identities=20% Similarity=0.269 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CCCCCCCccCCccccccCcccHHHHhhhcCEEEe---
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 568 (675)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +........... ..+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCC
Confidence 368999999999999999999999999999999999999863 111100000000 000000
Q ss_pred ---cCHHHHHHHHHHHHhC--CCEEEEECCCccCHHHHHh--CCccEEcCCc--cHHHHhccCEEecCCChhHHHHH
Q 005830 569 ---VFPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 569 ---~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~--A~vgia~~~~--~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
..+..|...++.+.++ ...++++||+.||..|.++ ++++++.+.. .+.....+|+++ +++..+.+.
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 222 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIEV 222 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHHh
Confidence 0123466777766554 3569999999999999888 4555655522 233455689998 457766654
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.28 E-value=9.7e-07 Score=85.19 Aligned_cols=92 Identities=24% Similarity=0.294 Sum_probs=68.8
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH---
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE--- 572 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~--- 572 (675)
+++.+.|+.++++|++++++||+....+..+++.+|+.............. +.....+.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211000000000 11234555544
Q ss_pred HHHHHHHHH------HhCCCEEEEECCCccCHHHHH
Q 005830 573 HKYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (675)
Q Consensus 573 ~K~~iv~~l------~~~~~~v~~iGDg~ND~~al~ 602 (675)
.|...++.+ +.....++++|||.||.+|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 445789999999999999996
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=9.7e-06 Score=80.10 Aligned_cols=127 Identities=18% Similarity=0.178 Sum_probs=94.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (675)
...+-|++++++..|+++|++..++|+++...+..+.+..|+......... +.. .-..+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g--~~~-----------------~~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG--GDD-----------------VPPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc--CCC-----------------CCCCCcC
Confidence 345779999999999999999999999999999999999999753211111 000 0122335
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCC---ccEEcCC--ccHHHHhccCEEecCCChhHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~---vgia~~~--~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
|......++.+....+.++||||..+|..|-++|+ ||+..|. ........+|+++ +++..+...+.
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 77777777777666457999999999999999999 5666663 4556666799999 56777776553
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.2e-06 Score=81.00 Aligned_cols=132 Identities=12% Similarity=0.082 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-CCCCC-CccCCccccccCcccHHHHhhhcCEE---E
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSS-SLLGQDKDASIAALPVDELIEKADGF---A 567 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~---~ 567 (675)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +... ...+. ...+....... ...... .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k---------p~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW---------PHPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec---------cCCccccccc
Confidence 57999999999999999999999999998899988887 6431 10000 01110000000 000000 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHH--hccCEEecCCChhHHHHHH
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~--~~ad~vl~~~~~~~i~~~i 637 (675)
++ ...|..+++.++..+..++|+|||.||.+|.++||+.++-+.-.+.++ ..+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 00 124788889888777789999999999999999999777431112222 2244443 5677777665
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.6e-05 Score=78.81 Aligned_cols=127 Identities=17% Similarity=0.141 Sum_probs=89.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE-EEecC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-FAGVF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~r~~ 570 (675)
.++.|++.+.++.|++.|+++.++||........+.+..|+..... .+.+.+ .+ ..+-.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~---~~~~~~-----------------~~~~~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS---VVIGGD-----------------SLPNKKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc---EEEcCC-----------------CCCCCCcC
Confidence 4578999999999999999999999999999999999999853211 000000 00 01122
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCC----ccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~----~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
|+--..+++.++.....++++||+.+|+.+.+.|++ +|.+.. ..+.....+|+++ +++..+...+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 443345566665566789999999999999999999 555532 2334445788888 6788888877543
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.1e-05 Score=77.54 Aligned_cols=114 Identities=16% Similarity=0.083 Sum_probs=75.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~ 570 (675)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+...... +.+....... ...+.....+..++.. ..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~---i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE---IYSNPASFDN-DGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE---EeccCceECC-CCcEEEecCCCCccCcCCC
Confidence 36889999999999999999999999999999999999888532100 0000000000 0000000000000111 11
Q ss_pred HHHHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCccEE
Q 005830 571 PEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (675)
Q Consensus 571 p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgia 609 (675)
...|..+++.++.+ ...++++|||.||..|.++||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23588999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.10 E-value=7.2e-06 Score=77.96 Aligned_cols=100 Identities=22% Similarity=0.224 Sum_probs=69.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
++|++.+.++.+++.|++++++||.....+..+++.+|+.............. ...+.. ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~~~g~~--------~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG---LLTGPI--------EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC---EEeCcc--------CCcccCCcch
Confidence 58999999999999999999999999999999999999863211100000000 000000 0001244678
Q ss_pred HHHHHHHHHhC----CCEEEEECCCccCHHHHHhC
Q 005830 574 KYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (675)
Q Consensus 574 K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A 604 (675)
|...++.++++ ...++++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99888887654 34699999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.6e-05 Score=76.21 Aligned_cols=124 Identities=15% Similarity=0.123 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++||.+...+....+..|+...... .+.... ....+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~--i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH--VIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee--EEecCc-----------------CCCCCCChH
Confidence 6789999999999999999999999998888888888888532100 000000 001223344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE-c--CC--ccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--AD--ATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia-~--~~--~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+++.++-....++||||+.+|+.+-++|++... + |. ..+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 4455556565556779999999999999999999543 2 32 2344566799988 5677666543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.8e-05 Score=77.05 Aligned_cols=109 Identities=16% Similarity=0.090 Sum_probs=76.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEE-Eec
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF-AGV 569 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~r~ 569 (675)
..++++++.+.++.+++.|++++++||.....+..+++.+|+...... ......+ ....++ +. ..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~-~l~~~~~--g~~~g~----------~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT-RLEESED--GIYTGN----------IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec-ceEEcCC--CEEeCC----------ccCCCC
Confidence 346899999999999999999999999999999999999998532111 0000000 000000 00 113
Q ss_pred CHHHHHHHHHHHHh-CC---CEEEEECCCccCHHHHHhCCccEEcCC
Q 005830 570 FPEHKYEIVKRLQE-RK---HICGMTGDGVNDAPALKKADIGIAVAD 612 (675)
Q Consensus 570 ~p~~K~~iv~~l~~-~~---~~v~~iGDg~ND~~al~~A~vgia~~~ 612 (675)
.++.|...++.+.+ .+ ..++++||+.+|.+|++.|+.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 45678877766543 33 368999999999999999999998863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.7e-05 Score=80.04 Aligned_cols=148 Identities=16% Similarity=0.125 Sum_probs=96.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC---CCCCCc--cCC--------------------
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM---YPSSSL--LGQ-------------------- 545 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~---~~~~~~--~~~-------------------- 545 (675)
..+..|...+.++++++.|+.++++||++......+.+++++..+. ..+... ..+
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456789999999999999999999999999999999988875431 111100 000
Q ss_pred --------------c-ccc-------ccCccc----H---HHHhhhc--CE---EE-----ecCH--HHHHHHHHHHHhC
Q 005830 546 --------------D-KDA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER 584 (675)
Q Consensus 546 --------------~-~~~-------~~~~~~----~---~~~~~~~--~v---~~-----r~~p--~~K~~iv~~l~~~ 584 (675)
. ... ...... + .+.+... .+ ++ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 000 000000 1 1111111 11 11 2333 4788888887653
Q ss_pred ----CCEEEEECCCccCHHHHHh-CCccEEcCCccHHHHhccC-------EEecCCChhHHHHHHH
Q 005830 585 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (675)
Q Consensus 585 ----~~~v~~iGDg~ND~~al~~-A~vgia~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~ 638 (675)
...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++.....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 6799999999988886543 5555556678877764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.3e-05 Score=68.66 Aligned_cols=118 Identities=16% Similarity=0.071 Sum_probs=76.4
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 489 ~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
....++.+++.+.++.|++.|++++++||.....+....+.+|+.... ...+........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhhhh-cccccccccccccccCC
Confidence 345588999999999999999999999999999999999999873210 000000000000 00000000011112335
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhC-CccEE
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA-DIGIA 609 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A-~vgia 609 (675)
-.|+.+..+.+.+......++++||+.+|+.|++.+ .-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 567777777777766667899999999999999984 44443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=7.6e-05 Score=73.43 Aligned_cols=124 Identities=18% Similarity=0.133 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+...... +.+.+.. -..+..|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~---i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV---VITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE---EEecCcC----------------CCCCCCcH
Confidence 3679999999999999999999999999999988899998532100 0000000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc---EEcCC-cc-HHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG---IAVAD-AT-DAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg---ia~~~-~~-~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+++.+......+++|||+.+|..|-++|++- +..+. .. +.....+|+++ +++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 44555555554556799999999999999999984 33332 22 23344688887 5688777655
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.86 E-value=8e-05 Score=73.69 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
.+..-+++.++|++|++.|++++++||++...+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.80 E-value=2.9e-05 Score=77.68 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhC-C---CEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC----EEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~-~---~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad----~vl~~~~~~~i~~~i~ 638 (675)
..|...++.+.++ | ..|+++||+.||.+|++.++.||+|+++.+..++.|| ++...++-.++.++|+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3677777777653 2 3689999999999999999999999999999999999 8877778889988885
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00011 Score=72.03 Aligned_cols=122 Identities=15% Similarity=0.135 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...... +.+.+.. -..+-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~---~~~~~~~----------------~~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV---LIGGDSL----------------AQRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE---EEecCCC----------------CCCCCChH
Confidence 5789999999999999999999999999999999999998532110 0000000 01122233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE-c--CCc--cHHHHhccCEEecCCChhHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia-~--~~~--~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
-=..+.+.+......++++||+.+|+.+.++|++-.. + |.+ .+.....+|+++ +++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 3344455554445679999999999999999998543 3 322 123334688888 55666554
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00014 Score=74.29 Aligned_cols=126 Identities=16% Similarity=0.161 Sum_probs=83.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++.|++.++++.|++.|+++.++||.+...+..+.+..|+...... +.+.+.. -..+-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~---i~~~d~~----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW---IIGGDTL----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE---EEecCCC----------------CCCCCCc
Confidence 46789999999999999999999999998888888888887431100 0000000 0011122
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEc--C-C-ccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--A-D-ATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~--~-~-~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+--..+++.+.-....++|+||+.||+.+.+.|++ .+++ | + ..+.....+|+++ +++..+.+++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 22234444444345679999999999999999998 3444 3 1 2233445789998 56888876644
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00013 Score=79.85 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=73.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
|++|++.+.++++++.|++++++|+-+...+..+++.+|+-+.. .+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~V------igsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGV------FASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEE------EeCCC------------------ccccCCc
Confidence 47899999999999999999999999999999999999972211 11000 1134466
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 618 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~ 618 (675)
.|...++..... +.+.++||+.+|.++++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 675544432222 226789999999999999999999986554333
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00031 Score=69.48 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=35.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
-+.++++|+.++++|++++++||++...+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0004 Score=70.59 Aligned_cols=140 Identities=12% Similarity=0.123 Sum_probs=86.4
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhCCC--C-C---CC-CCCC-----cc----------------
Q 005830 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY-PSSS-----LL---------------- 543 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~--~-~---~~-~~~~-----~~---------------- 543 (675)
.+-+++.++|+.|++ .|+.++++||++........+.+++. . + .. .... +.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456899999999998 79999999999999988887766642 0 0 00 0000 00
Q ss_pred ---CCcccc----------ccC--cccHHHH----hhhcC--------EEEecCH--HHHHHHHHHHHhC----CCEEEE
Q 005830 544 ---GQDKDA----------SIA--ALPVDEL----IEKAD--------GFAGVFP--EHKYEIVKRLQER----KHICGM 590 (675)
Q Consensus 544 ---~~~~~~----------~~~--~~~~~~~----~~~~~--------v~~r~~p--~~K~~iv~~l~~~----~~~v~~ 590 (675)
+...+. ... .+.+..+ .+... .+..+.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 000 0111111 11111 1222333 3788777776543 357999
Q ss_pred ECCCccCHHHHHhC----CccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 591 iGDg~ND~~al~~A----~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+||+.||.+|++.+ +.||+||++. ..|++.+. +...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHHH
Confidence 99999999999999 9999999764 45778874 5666666653
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00025 Score=70.16 Aligned_cols=122 Identities=15% Similarity=0.154 Sum_probs=79.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
-++.|++.++++.|++.|+++.++|+........+.+..|+...... .+.+.. .-..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~-----------------~~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--LASAEK-----------------LPYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE--EEEccc-----------------CCCCCCCH
Confidence 35789999999999999999999999999999999999998543210 000000 00112234
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc-CC---ccHHHHhccCEEecCCChhHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~-~~---~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
+-=..+.+.+.-....++++||+.||+.+.+.|++.... .. ..+.-...+|+++ .++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 322333333333346799999999999999999986544 22 2222233578877 4566554
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00049 Score=69.57 Aligned_cols=97 Identities=15% Similarity=0.070 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+..... ...+.+... -..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~-----------------~~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDV-----------------PAGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccC-----------------CCCCCCHH
Confidence 457899999999999999999999999999998888888754311 001111000 01123344
Q ss_pred HHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=...++.+.-. ...++||||+.+|+.+-+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 444455555432 45699999999999999999973
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00081 Score=68.54 Aligned_cols=121 Identities=14% Similarity=0.072 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+...-+..|+...... .+.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~--vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV--VQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE--EEecCC------------------CC--CCHH
Confidence 4679999999999999999999999999999999999998542110 000000 00 0122
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-Ec--CCccH--HHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--ADATD--AARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~--~~~~~--~a~~~ad~vl~~~~~~~i~~~i 637 (675)
-=..+++.+.-....++||||+.+|+.+-++|++-. ++ |..+. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 112233333333557999999999999999999853 23 32222 2344689988 6688877755
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0005 Score=67.89 Aligned_cols=124 Identities=17% Similarity=0.177 Sum_probs=81.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC--CCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG--TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
.++.||+.+.++.|++.|+++.++|+-.......+.+..|+. ... ...+...+.. ..+-
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f--~~i~~~~~~~-----------------~~KP 146 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV--DAVVCPSDVA-----------------AGRP 146 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC--CEEEcCCcCC-----------------CCCC
Confidence 368899999999999999999999999999999999999975 211 1111110000 1122
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCccE--EcCCc--c--HHHHhccCEEecCCChhHHHHH
Q 005830 570 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGI--AVADA--T--DAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgi--a~~~~--~--~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
.|+-=...++.+.-. ...++|+||+.+|+.+-++|++.. ++..+ + +.....+|+++ +++..+..+
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 344333444444433 357999999999999999999986 33222 1 12234578877 556666544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00044 Score=68.80 Aligned_cols=125 Identities=15% Similarity=0.119 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+..... .+.+... .-..+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~---~i~~~~~----------------~~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA---VLIGGDT----------------LAERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc---EEEecCc----------------CCCCCCCHH
Confidence 468999999999999999999999999888888888888753210 0000000 001233455
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-Ec--CC--cc-HHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--AD--AT-DAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~--~~--~~-~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+++.+.-....++||||+.+|..|-+.|++.. ++ |. .. ......+|+++ +++..+.+.+.
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~ 225 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPAT 225 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhc
Confidence 455666666666678999999999999999999864 33 32 11 12234689998 56777765543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00086 Score=68.39 Aligned_cols=125 Identities=12% Similarity=0.076 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+..... ...+..... -..+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcC-----------------CCCCCChH
Confidence 467899999999999999999999999888877777777643210 000000000 01122343
Q ss_pred HHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCc---cEEcCCc-------------------------cHHHHhccCE
Q 005830 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADI---GIAVADA-------------------------TDAARSASDI 623 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~v---gia~~~~-------------------------~~~a~~~ad~ 623 (675)
-=....+.+.-. ...++||||+.+|+.+-+.|++ |+.-|.+ .+.....+|+
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~ 242 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHY 242 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCe
Confidence 334444444432 3569999999999999999998 3333322 1223345888
Q ss_pred EecCCChhHHHHHH
Q 005830 624 VLTEPGLSVIISAV 637 (675)
Q Consensus 624 vl~~~~~~~i~~~i 637 (675)
++ +++..+...+
T Consensus 243 vi--~~~~~l~~~l 254 (267)
T PRK13478 243 VI--DTIADLPAVI 254 (267)
T ss_pred eh--hhHHHHHHHH
Confidence 88 6677777665
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00096 Score=62.99 Aligned_cols=144 Identities=17% Similarity=0.189 Sum_probs=95.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCcc----------------ccccCcccH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK----------------DASIAALPV 556 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~----------------~~~~~~~~~ 556 (675)
++-||+.++++.|++. ...+++|---...+.++|..+|++-.......+.-++. ....+++++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3568999999999876 56777777888889999999998532211111100000 011122211
Q ss_pred HHHhhhcCEEEecCHHHHHHHHHHHH---------------hC---CCEEEEECCCccCHHHHHhCC-c-cEEcC-CccH
Q 005830 557 DELIEKADGFAGVFPEHKYEIVKRLQ---------------ER---KHICGMTGDGVNDAPALKKAD-I-GIAVA-DATD 615 (675)
Q Consensus 557 ~~~~~~~~v~~r~~p~~K~~iv~~l~---------------~~---~~~v~~iGDg~ND~~al~~A~-v-gia~~-~~~~ 615 (675)
-+.+. .+|.|..|..-.++++.++ .. ....+.+||++.|+.||+++. - |+|+. ||.+
T Consensus 162 fe~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 11111 2488888876555554444 22 234688999999999999874 3 47776 8888
Q ss_pred HHHhccCEEecCCChhHHHHHHHH
Q 005830 616 AARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 616 ~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
-+...||+.+..++..+...+|++
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 888899999999998888877754
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00081 Score=67.61 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 534 (675)
+..-+.+.++|++|+++||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3466779999999999999999999999999999999999853
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00078 Score=63.73 Aligned_cols=123 Identities=10% Similarity=0.003 Sum_probs=73.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 565 (675)
+-|+++++++.|++.|+++.++|+.... ......+..|+........ ..+.. .-
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~-----------------~~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPH-KHGDG-----------------CE 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcC-CCCCC-----------------CC
Confidence 6799999999999999999999987631 1222233455532100000 00000 00
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcCC--ccH--------HHHhccCEEecCCChhHHH
Q 005830 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVAD--ATD--------AARSASDIVLTEPGLSVII 634 (675)
Q Consensus 566 ~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~~--~~~--------~a~~~ad~vl~~~~~~~i~ 634 (675)
..+-.|+-=..+++.+......++||||..+|+.+-++|++-. ++.. +.+ .....+|+++ +++..+.
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~--~~~~el~ 168 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIA--ENFEDAV 168 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchh--hCHHHHH
Confidence 1233455445666666555567999999999999999999844 3332 222 1123466666 4466665
Q ss_pred HH
Q 005830 635 SA 636 (675)
Q Consensus 635 ~~ 636 (675)
..
T Consensus 169 ~~ 170 (173)
T PRK06769 169 NW 170 (173)
T ss_pred HH
Confidence 54
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0013 Score=66.59 Aligned_cols=121 Identities=17% Similarity=0.086 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+...... .+.+... -..+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~~~d~-----------------~~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLAAEDV-----------------YRGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEecccC-----------------CCCCCCHH
Confidence 4689999999999999999999999999999999888998532110 0100000 01223344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-Ec-CCccHHHHhccCEEecCCChhHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~-~~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
-=...++.+.-....++||||..+|+.|-++|++-. ++ +.........+|+++ ++++.+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHH
Confidence 444555555555667999999999999999999843 33 322222334578887 4566554
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0016 Score=65.65 Aligned_cols=116 Identities=12% Similarity=0.123 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+-....+...-+.+|+...... .+.+.+. -..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--iv~~~~~-----------------~~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA--VIIGSEC-----------------EHAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE--EEecCcC-----------------CCCCCChH
Confidence 4678999999999999999999999999999999999998542110 0111000 01233455
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-Ec--CCc-cHHHHhccCEEecC
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--ADA-TDAARSASDIVLTE 627 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~--~~~-~~~a~~~ad~vl~~ 627 (675)
--....+.+.-....++||||+.+|+.+-++|++-. ++ +.. .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 545566666555677999999999999999999843 23 221 12223468888844
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0022 Score=62.83 Aligned_cols=108 Identities=13% Similarity=0.037 Sum_probs=74.5
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i-~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.+.|++.+.| +.+++.|++++++|+-....+..+++.+|+... ..+.+...+....+.- .-..+..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~----~~~i~t~l~~~~tg~~---------~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR----VNLIASQMQRRYGGWV---------LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc----CceEEEEEEEEEccEE---------CCccCCC
Confidence 3589999999 578889999999999999999999999986210 0111111110000000 0123556
Q ss_pred HHHHHHHHHH-HhCCCEEEEECCCccCHHHHHhCCccEEcCCc
Q 005830 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVADA 613 (675)
Q Consensus 572 ~~K~~iv~~l-~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~ 613 (675)
++|..-++.. ........+-||+.||.|||+.|+.+++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 8898877654 33345567899999999999999999999743
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00052 Score=74.10 Aligned_cols=66 Identities=24% Similarity=0.217 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhC-------CCEEEEECCCccCHHHHHhCC-ccEEcCCccHHHHhcc--------CEEec-CCChhHHHH
Q 005830 573 HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EPGLSVIIS 635 (675)
Q Consensus 573 ~K~~iv~~l~~~-------~~~v~~iGDg~ND~~al~~A~-vgia~~~~~~~a~~~a--------d~vl~-~~~~~~i~~ 635 (675)
.|...++.|.+. ...|+++||+.||.+||+.|+ .||+|+|+.+..++.+ +++.. +.+-+++.+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~ 254 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQ 254 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence 577777777554 347899999999999999999 6999999999888643 55533 456777887
Q ss_pred HHH
Q 005830 636 AVL 638 (675)
Q Consensus 636 ~i~ 638 (675)
+|.
T Consensus 255 al~ 257 (413)
T PLN02382 255 AIG 257 (413)
T ss_pred HHH
Confidence 774
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00062 Score=65.98 Aligned_cols=94 Identities=18% Similarity=0.083 Sum_probs=68.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (675)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..... ..+... .+..+..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP--VQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC--EEEeec------------------CCCCCcC
Confidence 34567788999999999999999999999999999999999853211 000000 0112445
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhC
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 604 (675)
|+--..+++.+.-....++||||+.+|+.+-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 6655666676666667899999999999987764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0041 Score=62.63 Aligned_cols=137 Identities=10% Similarity=0.061 Sum_probs=80.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+...... +.........++. +.. ... . -+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~---IvSN~L~f~~dGv-ltG-~~~-P---~i~~ 190 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK---VVSNFMDFDEDGV-LKG-FKG-P---LIHT 190 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce---EEeeeEEECCCCe-EeC-CCC-C---cccc
Confidence 46799999999999999999999999999999999999998532110 1000000000000 000 000 0 0011
Q ss_pred HHHHHHHH-----HHH--hCCCEEEEECCCccCHHHHHhC---CccEEcC--Cc-----cHHHHhccCEEecCCChhHHH
Q 005830 572 EHKYEIVK-----RLQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 572 ~~K~~iv~-----~l~--~~~~~v~~iGDg~ND~~al~~A---~vgia~~--~~-----~~~a~~~ad~vl~~~~~~~i~ 634 (675)
..|.+.+. .+. .....|+++|||.||+.|..-. .--+.+| +. -+.-.++-|+|+.+|.--.++
T Consensus 191 ~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~ 270 (277)
T TIGR01544 191 FNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVA 270 (277)
T ss_pred cccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHH
Confidence 34544332 222 2346799999999999996543 2233333 32 223456789999987655555
Q ss_pred HHH
Q 005830 635 SAV 637 (675)
Q Consensus 635 ~~i 637 (675)
..|
T Consensus 271 ~~i 273 (277)
T TIGR01544 271 NSI 273 (277)
T ss_pred HHH
Confidence 443
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0016 Score=63.63 Aligned_cols=107 Identities=12% Similarity=0.015 Sum_probs=73.7
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~-~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..++... ..+.+...+.. ++.. ..-..+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~gg~--------~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NGGW--------VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CCce--------EcCccCCC
Confidence 46899999995 78889999999999999999999998665321 01111111100 0000 01123556
Q ss_pred HHHHHHHHHH-HhCCCEEEEECCCccCHHHHHhCCccEEcCC
Q 005830 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (675)
Q Consensus 572 ~~K~~iv~~l-~~~~~~v~~iGDg~ND~~al~~A~vgia~~~ 612 (675)
++|..-++.. ........+-||+.||.|||+.||..++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8888866644 3233456789999999999999999999974
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0025 Score=71.30 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=40.1
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 486 G~i~~~d~-lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
|.+.-.|. .-+.+.++|++++++|+.++++||+....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 55554333 4467899999999999999999999999999999999974
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0022 Score=63.21 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|+++|+++.++|+.+...+...-+..|+... . .+...+ . .-..+-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~-~i~~~~-----------~-----~~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---E-VFVTAE-----------R-----VKRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---c-EEEEHH-----------H-----hcCCCCCcH
Confidence 4689999999999999999999999887666665566666311 0 010000 0 001122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCCcc-HHHHhccCEEec
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 626 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~~-~~a~~~ad~vl~ 626 (675)
-=....+.+.-....++||||+.+|+.+-+.|++- |++..+. ......+|+++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 44444555554567899999999999999999984 5554322 223346788773
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.002 Score=71.09 Aligned_cols=124 Identities=11% Similarity=0.052 Sum_probs=82.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...... .+...+ +..+..|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~--i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE--TFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce--eEecCC------------------CCCCCCcH
Confidence 5789999999999999999999999999999999999998542111 010000 00111233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcC--CccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVA--DATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~--~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
--...++.+ ....++++||+.+|+.+-+.|++ .|++. ...+.....+|+++ +++..+...+...
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 222223333 24579999999999999999998 34442 22222234689988 5688877766443
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0021 Score=63.45 Aligned_cols=100 Identities=19% Similarity=0.224 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++.|++++++|+-+...+....+.+|+...... .+.+.+. -..+-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~--i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDA--VITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccE--EEEeccC-----------------CCCCCCHH
Confidence 4789999999999999999999999888878888888887432100 0000000 01122333
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCc-cEEcC
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 611 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~v-gia~~ 611 (675)
-=..+.+.+.-....++||||.. +|+.+-++|++ .|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 33344444444456799999998 99999999998 44444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0029 Score=65.14 Aligned_cols=122 Identities=19% Similarity=0.126 Sum_probs=75.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+-+......+-+..+..........+.+.. .-..+-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~-----------------~~~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDD-----------------VPKKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccc-----------------cCCCCCCHH
Confidence 468999999999999999999999988777666555443211000000000000 001223344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc-CCc--cHHHHhccCEEecCCChhHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA--TDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~-~~~--~~~a~~~ad~vl~~~~~~~i 633 (675)
-=..+++.+.-....++||||+.+|+.+-++|++.... ..+ .......+|+++ +++..+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 44555566655566799999999999999999986544 222 111123588887 445443
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.006 Score=58.18 Aligned_cols=128 Identities=20% Similarity=0.109 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
.+.||+.+.+++|++.|+++.++|+.+.. ....+-+..|+... ..+...... .
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~----~---- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHP----E---- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCC----C----
Confidence 35799999999999999999999987621 11122233444100 000000000 0
Q ss_pred HHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcCCcc--H-HHHhcc--CEEecCCChh
Q 005830 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADAT--D-AARSAS--DIVLTEPGLS 631 (675)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~~~~--~-~a~~~a--d~vl~~~~~~ 631 (675)
+..-..+-.|+--..+++.+.-....++||||+.+|+.+-++|++.. .+..|. . .....+ |+++ +++.
T Consensus 97 ----~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 97 ----DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ----CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 00001233455445566666555678999999999999999999843 222222 1 122235 7877 5577
Q ss_pred HHHHHHH
Q 005830 632 VIISAVL 638 (675)
Q Consensus 632 ~i~~~i~ 638 (675)
.+.+.+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 7766553
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0027 Score=61.86 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 531 (675)
++.+.+.++|++|++.|++++++||+.......+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0052 Score=64.91 Aligned_cols=121 Identities=17% Similarity=0.112 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+.....+..+-+..||...... .+.+.+. ...+-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~--Iv~sddv-----------------~~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV--IVAAEDV-----------------YRGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE--EEecCcC-----------------CCCCCCHH
Confidence 4679999999999999999999999999999999999998532110 0000000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcCCccHHH-HhccCEEecCCChhHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATDAA-RSASDIVLTEPGLSVII 634 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~~~~~~a-~~~ad~vl~~~~~~~i~ 634 (675)
-=...++.+.-....++|+||..+|+.|-+.|++-. ++..+.+.. ...||+++ +++..+.
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHHH
Confidence 445566666656778999999999999999999943 333322222 23588887 5576653
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0019 Score=64.91 Aligned_cols=68 Identities=22% Similarity=0.239 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHH-----HHhcc---C-EEecCCChhHHHHHH
Q 005830 571 PEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARSAS---D-IVLTEPGLSVIISAV 637 (675)
Q Consensus 571 p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~-----a~~~a---d-~vl~~~~~~~i~~~i 637 (675)
..+|...|+.++++ ...|+++||+.||.+||..++-||.++|+.+. ..... . +.-..+.-.+|++++
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 35798888888775 34688899999999999999999999988776 22222 2 344455667777776
Q ss_pred H
Q 005830 638 L 638 (675)
Q Consensus 638 ~ 638 (675)
.
T Consensus 243 ~ 243 (247)
T PF05116_consen 243 Q 243 (247)
T ss_dssp H
T ss_pred H
Confidence 4
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.011 Score=69.11 Aligned_cols=170 Identities=19% Similarity=0.179 Sum_probs=99.3
Q ss_pred HHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecc--cCCCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHH
Q 005830 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGKE 525 (675)
Q Consensus 449 ~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~--~d~lr~~~~~~i~~l~~-~gi~v~~~TGd~~~~a~~ 525 (675)
+.....|...-.|.+++-+.. |++..-.- ...+.+++.++|++|.+ .|+.|+++||++......
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344555555566777776655 44432111 12366899999999999 699999999999988877
Q ss_pred HHHHhCCCCCCCCCCCc---cCCccc---------------------------------cc------cCccc--------
Q 005830 526 TGRRLGMGTNMYPSSSL---LGQDKD---------------------------------AS------IAALP-------- 555 (675)
Q Consensus 526 ia~~~gi~~~~~~~~~~---~~~~~~---------------------------------~~------~~~~~-------- 555 (675)
.....++.- +...... .++... .. ..+..
T Consensus 548 ~~~~~~l~l-iaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~ 626 (726)
T PRK14501 548 WFGDLPIHL-VAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANE 626 (726)
T ss_pred HhCCCCeEE-EEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHH
Confidence 665444310 0000000 000000 00 00000
Q ss_pred HHHHhh----hcC--E-----EEecCH--HHHHHHHHHHHhC--CCEEEEECCCccCHHHHHhC---CccEEcCCccHHH
Q 005830 556 VDELIE----KAD--G-----FAGVFP--EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAA 617 (675)
Q Consensus 556 ~~~~~~----~~~--v-----~~r~~p--~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A---~vgia~~~~~~~a 617 (675)
+...+. +.. + +..+.| -+|...++.+.+. ...++++||+.||.+|++.+ +.+|+||++
T Consensus 627 l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~---- 702 (726)
T PRK14501 627 LILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG---- 702 (726)
T ss_pred HHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----
Confidence 111111 111 1 112223 4788888888764 35799999999999999986 578888864
Q ss_pred HhccCEEecCCChhHHHHHHH
Q 005830 618 RSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 618 ~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+.+|++.+.+ -..+..+++
T Consensus 703 ~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 703 ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred CCcceEeCCC--HHHHHHHHH
Confidence 4678899854 455665554
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.006 Score=54.75 Aligned_cols=93 Identities=16% Similarity=0.139 Sum_probs=65.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhc
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (675)
-++.|++.++++.|+++|+++.++|+.. ........+.+|+...... ...
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLY---ACP------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEE---ECC-------------------
Confidence 3678999999999999999999999988 6777778888887421000 000
Q ss_pred CEEEecCHHHHHHHHHHHH-hCCCEEEEECC-CccCHHHHHhCCcc
Q 005830 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADIG 607 (675)
Q Consensus 564 ~v~~r~~p~~K~~iv~~l~-~~~~~v~~iGD-g~ND~~al~~A~vg 607 (675)
-..+-.|+-=..+++.++ -....++|||| ..+|+.+-+.+++-
T Consensus 82 -~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 -HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 011223343345556663 55678999999 69999999998873
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0041 Score=60.20 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=67.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++.|+++.++|+-+........+.+|+..... ..+...+. -..+-.|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~-----------------~~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD--AVLSADAV-----------------RAYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh--eeEehhhc-----------------CCCCCCHH
Confidence 467999999999999999999999988888888888889743210 00000000 01122233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
-=..+.+.+.-....+++|||+.+|+.+-++|++-.
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 334455555545667999999999999999998853
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0044 Score=64.36 Aligned_cols=108 Identities=13% Similarity=0.071 Sum_probs=76.2
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
..+++.+++.+.++.|++.|++++++||.+...+..+.+.+|+...... .+.+.. ....++.... -.+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~--------~~~~~~~~~~-~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRP--------PDMHFQREQG-DKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCc--------chhhhcccCC-CCCC
Confidence 5678999999999999999999999999999999999999988531110 000000 0000000000 1244
Q ss_pred CHHHHHHHHHHHHh-CCCEEEEECCCccCHHHHHhCCccE
Q 005830 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 570 ~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
.|+-+...++.+-. ....++|+||..+|+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 57777777776644 3478999999999999999999864
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0049 Score=60.81 Aligned_cols=122 Identities=12% Similarity=0.064 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++. +++.++|+-.........+.+|+..... ..+..... -..+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd--~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD--DIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC--EEEEcCcc-----------------CCCCCCHH
Confidence 5689999999999999 9999999998888888888888853210 00000000 01122233
Q ss_pred HHHHHHHHH-HhCCCEEEEECCCc-cCHHHHHhCCc-cEEcC--CccHHHHhccCEEecCCChhHHHHH
Q 005830 573 HKYEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVA--DATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 573 ~K~~iv~~l-~~~~~~v~~iGDg~-ND~~al~~A~v-gia~~--~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
-=...++.+ .-....+++|||+. +|+.+-+.+++ +|.+. ..+......+|+++ ++++.+..+
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 334445555 43456799999998 89999999997 33332 22222223567776 456666543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0036 Score=61.98 Aligned_cols=96 Identities=10% Similarity=-0.017 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+.+...+...-+..|+..... ..+.+... -..+-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~iv~s~~~-----------------~~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD--LLLSTHTF-----------------GYPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC--EEEEeeeC-----------------CCCCCCHH
Confidence 568999999999999999999999988888877777788743110 00000000 00112233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=....+.+.-....++||||+.+|+.+-++|++.
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 22334444444456799999999999999999996
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0026 Score=62.98 Aligned_cols=91 Identities=21% Similarity=0.243 Sum_probs=61.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
+.+++.+.++.++++|+++.++|+. ...++..+.+.+|+.... ..+.+.+.. ...
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CCC
Confidence 4455999999999999999999998 667899999999996321 011110000 000
Q ss_pred CHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEc
Q 005830 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 610 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~ 610 (675)
.| +|. ..+++.+ .++|+||..||..+-++|++- |++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 122 2344444 489999999999999999883 444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0028 Score=58.06 Aligned_cols=110 Identities=15% Similarity=0.071 Sum_probs=70.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE--ecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~~ 570 (675)
.++|+-++.++.+++.+++++++|+.-......+-..++=-..+.....+...... ..++. .. .++. ..-
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i-h~dg~-h~------i~~~~ds~f 144 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI-HIDGQ-HS------IKYTDDSQF 144 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE-cCCCc-ee------eecCCcccc
Confidence 47899999999999999999999988776666666665511110000000000000 00000 00 0000 111
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
-.+|...|+.+++....+.|||||+.|+.|-+.+|+=.|-
T Consensus 145 G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 145 GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 3479999999999999999999999999999988886653
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0058 Score=60.50 Aligned_cols=90 Identities=24% Similarity=0.320 Sum_probs=62.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
.+.+++++.++.+++.|+++.++||+. ..++..+.+..|+........ +++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v------------------------il~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV------------------------IFAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE------------------------EEcC
Confidence 367889999999999999999999964 568888888899842111110 1221
Q ss_pred cCH--HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEc
Q 005830 569 VFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (675)
Q Consensus 569 ~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~ 610 (675)
-++ .+|.. .+++.+ .++|+||..+|..+-++|++ +|.+
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 111 23433 334444 58899999999999999998 4444
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0025 Score=59.85 Aligned_cols=96 Identities=18% Similarity=0.189 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|++++++|+.+........+.+|+.... ...+...+.. ..+..|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f--~~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF--DEIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC--SEEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc--ccccccchhh-----------------hhhhHHH
Confidence 46899999999999999999999999999999999999985211 0111000000 1122234
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=..+++.+.-.+..+++|||+..|+.+-+.|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 44556666665677899999999999999999874
|
... |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.015 Score=55.14 Aligned_cols=126 Identities=16% Similarity=0.103 Sum_probs=68.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHhCCCCCC-CC-CCCccCCccccccCcccH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNM-YP-SSSLLGQDKDASIAALPV 556 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~-~~-~~~~~~~~~~~~~~~~~~ 556 (675)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+.... .. .....+.. .+
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~--------~~ 98 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVE--------EF 98 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccc--------cc
Confidence 5689999999999999999999976631 111222233332100 00 00000000 00
Q ss_pred HHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE--EcCCcc---HHHHhccCEEecCCChh
Q 005830 557 DELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI--AVADAT---DAARSASDIVLTEPGLS 631 (675)
Q Consensus 557 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi--a~~~~~---~~a~~~ad~vl~~~~~~ 631 (675)
. ...-..+-.|+-=....+.+.-....++||||..+|+.+-++|++.. .+..|. ......+|+++ +++.
T Consensus 99 ~----~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~~ 172 (176)
T TIGR00213 99 R----QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSLA 172 (176)
T ss_pred c----CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccHH
Confidence 0 00001122343334444444444567999999999999999999953 433222 11223488988 4555
Q ss_pred HH
Q 005830 632 VI 633 (675)
Q Consensus 632 ~i 633 (675)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 54
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0044 Score=59.13 Aligned_cols=94 Identities=11% Similarity=0.003 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...... .+.+.+ .-..+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~--~~~~~~-----------------~~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDA--IVDPAE-----------------IKKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcE--EEehhh-----------------cCCCCCChH
Confidence 5679999999999999999999997532 3456677777432100 000000 001122333
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=....+.+.-....++||||+.+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 33344444443445799999999999999999984
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.02 Score=53.91 Aligned_cols=110 Identities=10% Similarity=0.048 Sum_probs=73.0
Q ss_pred HHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCC
Q 005830 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMG 533 (675)
Q Consensus 455 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~ 533 (675)
+.+.|.+.+.+-... ++.-- =...+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 445788888776543 11100 123578999999999999999999999987 56677777777763
Q ss_pred CCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCcc
Q 005830 534 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG 607 (675)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg 607 (675)
... . ..+-.|+-=..+.+.+.-....++||||.. .|..+-+.|++-
T Consensus 85 ~~~-------~---------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VLP-------H---------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EEc-------C---------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 110 0 011223322333344433456799999998 799999999983
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=56.23 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|++++++|+-.... ..+..++|+...... .+.+.. .-..+-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~--i~~~~~-----------------~~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDV--VIFSGD-----------------VGRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCE--EEEcCC-----------------CCCCCCCHH
Confidence 578999999999999999999999888776 555555787431100 000000 001222344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v 606 (675)
--..+.+.+......++++||...|+.+-+++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 4455555555556789999999999999999887
|
HAD subfamilies caused by an overly broad single model. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.023 Score=52.74 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=65.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCCCCccCCccccccCcccHHHHhhh
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (675)
+|.+.+++++++++++++|++++.+||+....+. ....++ | +... + .+... +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g--~--li~~~-------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG--P--VLLSP-------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc--e--EEEcC-------Ccchhh-hhc
Confidence 4678999999999999999999999999987774 344441 2 3210 0 00000 000000 000
Q ss_pred cCEEEecCHHHHHHHHHHHHh-----CCCEEEEECCCccCHHHHHhCCcc
Q 005830 563 ADGFAGVFPEHKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 563 ~~v~~r~~p~~K~~iv~~l~~-----~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
.+..+-.-+.|...++.+.+ ....++.+|++.+|+.+.+++++-
T Consensus 93 -e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11222222348777877776 345677899999999999887764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.015 Score=57.45 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=76.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|+ .|+++.++|+.....+...-+..|+...... .+.+.+. -..+-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~--v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDL--LVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCE--EEEECcc-----------------CCCCCCHH
Confidence 36799999999999 6899999999888888777777887421100 0000000 01122233
Q ss_pred HHHHHHHHHHhC-CCEEEEECCCc-cCHHHHHhCCcc-EEcC-CccH-HHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQER-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGDg~-ND~~al~~A~vg-ia~~-~~~~-~a~~~ad~vl~~~~~~~i~~~i 637 (675)
-=..+++.+.-. ...+++|||+. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 334444544322 25799999998 799999999985 4443 2221 1112478877 5577776654
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.011 Score=63.53 Aligned_cols=119 Identities=18% Similarity=0.134 Sum_probs=75.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+...... .+.+.+ .-..+-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~--ii~~d~-----------------v~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSV--IVGGDE-----------------VEKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCE--EEehhh-----------------cCCCCCCH
Confidence 467999999999999999999999998877766554 5676321100 000000 00122234
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcCC--ccHHHHhccCEEecCCChhH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVAD--ATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~~--~~~~a~~~ad~vl~~~~~~~ 632 (675)
+-=..+++.+.-....++|+||+.+|+.+-++|++.. ++.. ........+|.++ +++..
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i--~sl~e 215 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI--NSLLD 215 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe--CCHhH
Confidence 4444555555545678999999999999999999863 3332 2233334577776 34444
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0065 Score=57.96 Aligned_cols=94 Identities=13% Similarity=0.088 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+. ..+..+-+..|+...... .+..... -..+..|+
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~--v~~~~~~-----------------~~~kp~~~ 146 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA--IVDADEV-----------------KEGKPHPE 146 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE--eeehhhC-----------------CCCCCChH
Confidence 57899999999999999999999987 556677777887432100 0000000 00111222
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=..+.+.+.-....+++|||+.+|+.+-+.|++.
T Consensus 147 ~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11233333333346799999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.014 Score=54.92 Aligned_cols=110 Identities=6% Similarity=-0.032 Sum_probs=69.7
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhc
Q 005830 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (675)
Q Consensus 485 lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (675)
.....-+-++.|++.+.++.|+++|+++.++|+- ....+..+...+|+...-. ...+...+. .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-e
Confidence 3344444567899999999999999999999976 8888888888888741000 000000000 0
Q ss_pred CEEEecCHHHH--HHHHHHHHh------CCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 564 DGFAGVFPEHK--YEIVKRLQE------RKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 564 ~v~~r~~p~~K--~~iv~~l~~------~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
.+.+.-.+..| ..+.+.+.+ ....++|+||...|+.+-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 11111111122 234454443 246799999999999999999986544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.011 Score=54.25 Aligned_cols=100 Identities=18% Similarity=0.116 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
++.|++.++++.|++.|+++.++|+.+. ..+..+.+.+|+.....-.. .......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4689999999999999999999998652 34455667777741100000 0000000
Q ss_pred HHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
.-..+-.|+-=..+++.+.-....++||||...|+.+-+.+++-.
T Consensus 97 ------~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 97 ------CSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 000111222223334444434567999999999999999998843
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0038 Score=62.79 Aligned_cols=53 Identities=21% Similarity=0.269 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCEEEEECC----CccCHHHHHhC-CccEEcCCccHHHHhccCEE
Q 005830 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIV 624 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~A-~vgia~~~~~~~a~~~ad~v 624 (675)
-+|..-++.|.+....|+++|| |.||.+||+.| -.|++++|+++..+..+.++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHh
Confidence 4799999999888789999999 99999999976 57888889999888776554
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.0094 Score=55.02 Aligned_cols=90 Identities=22% Similarity=0.248 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
..+++.+.++.|++.|+++.++|+.....+....+.. +.... .. +...+ .+..+..|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f--~~-i~~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF--DL-ILGSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC--cE-EEecC-----------------CCCCCcCHHH
Confidence 3479999999999999999999999888887777764 32210 00 00000 0112223333
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCC
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 605 (675)
=..+.+.+.-.. .++++||..+|+.+-++|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 334444444345 7999999999999988774
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.021 Score=55.41 Aligned_cols=95 Identities=15% Similarity=0.059 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++-|++.++++.|++.|+++.++|+-... .....+.+|+...... .+.... .-..+-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~--i~~s~~-----------------~~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDF--VVTSYE-----------------VGAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcce--EEeecc-----------------cCCCCCCHH
Confidence 56799999999999999999999976543 4566677776421100 000000 001122333
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg 607 (675)
-=..+++.+.-....++||||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 33334444444456799999997 899999888863
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.021 Score=53.21 Aligned_cols=100 Identities=12% Similarity=0.001 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
++-|++.++++.|+++|+++.++|.-. ...+..+.+.+|+.-. ..+.+....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~--------- 95 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFP--------- 95 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCC---------
Confidence 356899999999999999999999742 3345666677776410 000000000
Q ss_pred HHhhhcCE-EEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE
Q 005830 558 ELIEKADG-FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (675)
Q Consensus 558 ~~~~~~~v-~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia 609 (675)
.... +..-.|+-=..+++.+......++||||+.+|..+-++|++-..
T Consensus 96 ----~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 96 ----DDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0000 11112222233334433334569999999999999999998543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.023 Score=55.97 Aligned_cols=98 Identities=15% Similarity=0.120 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE-EEecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-FAGVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~r~~ 570 (675)
++.|++.+.|+.|++.|+++.++||-....... ..+..++.... ...+...+. .+ ..+-.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f--~~i~~~~~~----------------~~~~~KP~ 139 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM--HHVVTGDDP----------------EVKQGKPA 139 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC--CEEEECChh----------------hccCCCCC
Confidence 467999999999999999999999877543322 22222331100 000000000 00 11122
Q ss_pred HHHHHHHHHHHH---hCCCEEEEECCCccCHHHHHhCCccE
Q 005830 571 PEHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 571 p~~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
|+-=...++.+. -....++||||+..|+.+-++|++-.
T Consensus 140 p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 140 PDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred cHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 333344445553 23467999999999999999999944
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.027 Score=55.29 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=67.4
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC---CCCCCCCCCCccCCccccccCcccHHHHhhhcCEE
Q 005830 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (675)
++-++.||+.++++.|+++|+++.++|..+......+-+..+ +... ++... +..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--------------------f~~~f-d~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--------------------FSGYF-DTTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--------------------cceEE-EeCcc
Confidence 345789999999999999999999999888766665555442 2110 00000 01112
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
.+-.|+-=..+++.+.-....++|+||...|+.|-++|++-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 23344444556666655567899999999999999999996543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.091 Score=47.91 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=78.5
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
..+.+.+.|.+.+.+-.++ +++..=. ...-|++++=+.+++++|+++.++|..+...+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd~--~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWDN--PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceecccC--CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 4567788999999887665 4444322 334578888899999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH--HHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCc
Q 005830 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDG-VNDAPALKKADI 606 (675)
Q Consensus 531 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K--~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~v 606 (675)
|+.. ++--..|-.+ .+.++.++-..+.|+||||- ..|+-+=+.|++
T Consensus 84 ~v~f------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 84 GVPF------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred CCce------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 9852 1111223322 33444444456789999999 568877666665
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.38 Score=48.14 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=59.5
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhc
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (675)
|.+.-.+.+-|++.++++.|+++|+++.++|.-...... ...+++|+..... . .
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~-~---------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-E-M---------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-c-e----------------------
Confidence 666667788999999999999999999999985544333 4557788753000 0 0
Q ss_pred CEEEecCHHHHHHHHHHHHh---CCCEEEEECCCccCHHHHHhCC
Q 005830 564 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 605 (675)
Q Consensus 564 ~v~~r~~p~~K~~iv~~l~~---~~~~v~~iGDg~ND~~al~~A~ 605 (675)
+++.- ......+.+.+++ .+..+.++||+..|...+..++
T Consensus 73 -Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 -IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11100 0001122222232 2467999999999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.13 Score=51.82 Aligned_cols=86 Identities=14% Similarity=0.086 Sum_probs=57.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
.++-|++.+.++.+++.|+++.++|+..... +...-+..|+..... . .++.|
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~--d-----------------------~lllr 171 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE--E-----------------------HLLLK 171 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc--c-----------------------eEEeC
Confidence 4567999999999999999999999987433 334556678753210 0 12333
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHH
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~ 602 (675)
-....|..-.+.+.+...+++++||-.+|.....
T Consensus 172 ~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 172 KDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 2222355555556555567999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.38 Score=48.65 Aligned_cols=48 Identities=27% Similarity=0.345 Sum_probs=37.1
Q ss_pred EEecccCC----CCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCC
Q 005830 486 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMG 533 (675)
Q Consensus 486 G~i~~~d~----lr~~~~~~i~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~ 533 (675)
|++.-.+. +=|++.++|++|+++|++++++||.+..+ .....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55655566 78899999999999999999999977665 34444556764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.13 Score=45.88 Aligned_cols=86 Identities=10% Similarity=0.107 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhC-------CCCCCCCCCCccCCccccccCcccHHHHhhhcC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG-------MGTNMYPSSSLLGQDKDASIAALPVDELIEKAD 564 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd-~~~~a~~ia~~~g-------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (675)
++.+++.+.++.|+++|+++.++|+. ....+..+-+..| +... ++..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~--------------------f~~~----- 83 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEY--------------------FDPL----- 83 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhh--------------------hhhh-----
Confidence 68899999999999999999999999 7777767666666 2110 0110
Q ss_pred EEEecCH--HHHHHHHHHHH--hCCCEEEEECCCccCHHHHHh
Q 005830 565 GFAGVFP--EHKYEIVKRLQ--ERKHICGMTGDGVNDAPALKK 603 (675)
Q Consensus 565 v~~r~~p--~~K~~iv~~l~--~~~~~v~~iGDg~ND~~al~~ 603 (675)
+.+.-.| +-=..+++.+. -....++|+||...|...++.
T Consensus 84 ~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 84 TIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred hhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 1111123 32234445554 445789999999999877653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.029 Score=51.51 Aligned_cols=95 Identities=16% Similarity=0.034 Sum_probs=63.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (675)
.-++||++.+.++.|+ .++++.+.|.-+...+..+-+.+|+..... ...+...+ +.+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f-~~i~~~~d-------------------~~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFG-YRRLFRDE-------------------CVFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEe-eeEEECcc-------------------ccccC
Confidence 3457999999999998 579999999999999999999888742110 00000000 00111
Q ss_pred HHHHHHHHHHHH---hCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 571 PEHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 571 p~~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
|. +.+.++ .....++++||..+|..+-+++++-|..
T Consensus 102 P~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 21 333333 3456899999999999987777665544
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.1 Score=48.95 Aligned_cols=93 Identities=8% Similarity=-0.015 Sum_probs=57.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhh
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (675)
-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+... ..+.... .
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~----~ii~~~~-~-------------- 104 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQ----VLAATHA-G-------------- 104 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEE----EEEecCC-C--------------
Confidence 489999999999999999999975532 34566677787420 0000000 0
Q ss_pred cCEEEecCHHHHHHHHHHHH--hCCCEEEEECCCc--------cCHHHHHhCCccE
Q 005830 563 ADGFAGVFPEHKYEIVKRLQ--ERKHICGMTGDGV--------NDAPALKKADIGI 608 (675)
Q Consensus 563 ~~v~~r~~p~~K~~iv~~l~--~~~~~v~~iGDg~--------ND~~al~~A~vgi 608 (675)
....-.|+-=..+.+.+. -....++||||.. +|..+-++|++-.
T Consensus 105 --~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 --LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred --CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 011112332234444443 2345799999986 6999988887743
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.093 Score=55.21 Aligned_cols=100 Identities=10% Similarity=-0.031 Sum_probs=58.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 556 (675)
-++.|++.++++.|+++|+++.++|+- ....+..+.+..|+... ..+...... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~----s--- 97 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP----E--- 97 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC----c---
Confidence 467899999999999999999999983 12334555666666310 000000000 0
Q ss_pred HHHhhhcCEEEe-cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 557 DELIEKADGFAG-VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 557 ~~~~~~~~v~~r-~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
....+| ..|+-=..+.+.+.-....++||||+.+|..+-+.|++-.
T Consensus 98 ------d~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 98 ------DNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred ------ccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 000111 1122222223333333467999999999999999999854
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.097 Score=51.63 Aligned_cols=101 Identities=19% Similarity=0.198 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC---CCC-CCccCCccccccCcccHHHHhhhcCEE
Q 005830 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNM---YPS-SSLLGQDKDASIAALPVDELIEKADGF 566 (675)
Q Consensus 493 ~lr~~~~~~i~~l--~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (675)
|+.|+.++.++.+ ++.|+.+.++|.-+...-..+-+.-|+.... ..+ ..+..... ..+.- ....-+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~------l~v~p--yh~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGR------LRVRP--YHSHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCce------EEEeC--ccCCCC
Confidence 5788999999999 5689999999999998888888998985421 111 11110000 00000 000123
Q ss_pred EecCH-HHHHHHHHHHHhC----C---CEEEEECCCccCHHHH
Q 005830 567 AGVFP-EHKYEIVKRLQER----K---HICGMTGDGVNDAPAL 601 (675)
Q Consensus 567 ~r~~p-~~K~~iv~~l~~~----~---~~v~~iGDg~ND~~al 601 (675)
.++.| .=|..+++.++.. | ..|.+||||.||....
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 34444 4688888888765 4 6899999999996543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.045 Score=53.45 Aligned_cols=97 Identities=13% Similarity=0.026 Sum_probs=58.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
-++.|++.+.++.|++.|+++.++|+..... ........++...... .+.... .-..+-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~--v~~s~~-----------------~~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDA--VVESCL-----------------EGLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCE--EEEeee-----------------cCCCCC
Confidence 3578999999999999999999999865432 2222222333111000 000000 001122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
.|+-=..+++.+.-....++||||...|+.+-++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 34433444555544456799999999999999999984
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.05 Score=54.56 Aligned_cols=68 Identities=19% Similarity=0.159 Sum_probs=49.0
Q ss_pred EecCHHHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhC--------CccEEcCCccHHHHhccCEEecCCChhHHH
Q 005830 567 AGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A--------~vgia~~~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ..||+++.+. .+..|++++ ++...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~--~~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHL--TGPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeC--CCHHHHH
Confidence 344456788877776554 34799999999999999998 4777775332 356789988 4677766
Q ss_pred HHHH
Q 005830 635 SAVL 638 (675)
Q Consensus 635 ~~i~ 638 (675)
..+.
T Consensus 237 ~~L~ 240 (244)
T TIGR00685 237 EFLG 240 (244)
T ss_pred HHHH
Confidence 6653
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.24 Score=60.23 Aligned_cols=119 Identities=14% Similarity=0.119 Sum_probs=78.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+-||+.+.++.|+++|+++.++|+-....+...-+..|+...... ..+...+. -..+-.|+-
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~-----------------~~~KP~Pe~ 223 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAF-----------------ENLKPAPDI 223 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECccc-----------------ccCCCCHHH
Confidence 568999999999999999999999988888888888888411000 00000000 011223444
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCC---ccHHHHhccCEEecCCChhH
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD---ATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~---~~~~a~~~ad~vl~~~~~~~ 632 (675)
=...++.+.-....++++||..+|+.+-++|++ -|++.. ..+.....+|+++. ++..
T Consensus 224 ~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~--~l~e 284 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK--DIGN 284 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC--ChHH
Confidence 455556665556789999999999999999998 344432 22333456788884 4444
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.28 Score=48.18 Aligned_cols=81 Identities=19% Similarity=0.192 Sum_probs=54.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
-|.-|++.++++.+++.|++|+++||+.... +..--++.|+... .. ++-|
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~-----------------------LiLR 171 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KH-----------------------LILR 171 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----Ce-----------------------eeec
Confidence 3677899999999999999999999999755 3333345566421 00 1111
Q ss_pred c------C-HHHHHHHHHHHHhCCC-EEEEECCCccCHH
Q 005830 569 V------F-PEHKYEIVKRLQERKH-ICGMTGDGVNDAP 599 (675)
Q Consensus 569 ~------~-p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~ 599 (675)
- + ..-|...-+.+.+.|+ +++.+||-.+|..
T Consensus 172 ~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 172 GLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 1 1 1126666666776665 6778999999973
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.66 E-value=1.2 Score=46.84 Aligned_cols=61 Identities=21% Similarity=0.216 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhC-------CCEEEEECCCccCHHHHHhC-----CccEEcCCccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~-------~~~v~~iGDg~ND~~al~~A-----~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
+|...++.+-+. +..++++||...|-.|++.. ++||.+|.... ...|++.+ ++.+.+.+++
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888777653 23589999999999999865 46666663221 25688888 5677777666
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.11 Score=51.18 Aligned_cols=97 Identities=11% Similarity=0.083 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.| ++++.++|+.....+...-+..|+...... ..+.+... -..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~-----------------~~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDI-----------------QRWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhc-----------------CCCCCChH
Confidence 4568999999998 489999999988777777777787532110 00000000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
-=....+.+.-....++||||..+|+.+-++|++.+..
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 33444555544456799999999999999999987653
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.68 Score=54.80 Aligned_cols=66 Identities=8% Similarity=0.067 Sum_probs=43.9
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHH
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGRR 529 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l-~~~gi~v~~~TGd~~~~a~~ia~~ 529 (675)
..+.|.....|.+++-|.. |++-.-...-.+.++..+++++| ++.|+.|+++||+...+....-..
T Consensus 587 i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 587 IVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred HHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 3444555555666665544 33322111235567899999997 778999999999999887766543
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.32 Score=50.95 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=66.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE-
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA- 567 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 567 (675)
++.+++.++|+.|++.|+++.++|.-+...+..+-+. +|+..... .+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~--------------------------~~~~~ 84 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD--------------------------ARSIN 84 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee--------------------------EEEEe
Confidence 3578999999999999999999999999999888887 66542110 0111
Q ss_pred -ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 568 -GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 568 -r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
...|+.=..+.+.+.-....++|+||...|+.+.+++...+.+
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 1223333444455544457899999999999999998887655
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.16 Score=49.06 Aligned_cols=97 Identities=10% Similarity=-0.005 Sum_probs=58.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
++.|++.++++.|++.|+++.++|+-+.......-.. .++..... ..+...+ .-..+-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd--~v~~s~~-----------------~~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAAD--HIYLSQD-----------------LGMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcC--EEEEecc-----------------cCCCCCCH
Confidence 4689999999999999999999998765543322111 23211000 0000000 00112223
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
+-=..+++.+.-....++++||...|+.+-++|++-.
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 3334455555555677999999999999999999853
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.14 Score=48.68 Aligned_cols=98 Identities=11% Similarity=0.044 Sum_probs=63.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|+ .+++++|+-+...+....+.+|+...... .+....... ....++-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~--i~~~~~~~~-------------~~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDG--IFCFDTANP-------------DYLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCe--EEEeecccC-------------ccCCCCCCHH
Confidence 36789999999997 47899999888888888899988532110 000000000 0000122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
-=..+++.+......++||||...|+.+-+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 335555666555678999999999999999888743
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.85 Score=43.58 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=33.7
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 497 ~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
.+.+.+..|+++|++|+.+|.-....-...-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5788999999999999999999998888899999975
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.22 Score=52.73 Aligned_cols=63 Identities=22% Similarity=0.167 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhC-C-----C-EEEEECCCccCHHHHHh-----CCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~-~-----~-~v~~iGDg~ND~~al~~-----A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
-+|...++.+.+. | . .++++||+.||..|++. +++||+|+++.... .|++.+ ++-..+.+++.
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHHHHHHHHH
Confidence 3888888877654 2 1 25899999999999996 58999998765433 678888 55677766664
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.28 E-value=0.48 Score=44.09 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=77.2
Q ss_pred HHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC--eEEEEcCC-------CHHHHHH
Q 005830 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIGKE 525 (675)
Q Consensus 455 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi--~v~~~TGd-------~~~~a~~ 525 (675)
+.+.|.|.+.+-.++ ++ ..-=++++.++..+.+++|++.+. +|+++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667788888776554 11 112357788999999999999877 49999986 4788999
Q ss_pred HHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhC-----CCEEEEECCC-ccCHH
Q 005830 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDG-VNDAP 599 (675)
Q Consensus 526 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-----~~~v~~iGDg-~ND~~ 599 (675)
+++.+|+..- .+....|.-..++.+.++.+ .+.++||||- ..|+-
T Consensus 101 ~~~~lgIpvl-----------------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPVL-----------------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcEE-----------------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 9999998510 12234676667788888755 6679999998 56777
Q ss_pred HHHhCC
Q 005830 600 ALKKAD 605 (675)
Q Consensus 600 al~~A~ 605 (675)
+=+..+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 665554
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.84 Score=43.67 Aligned_cols=111 Identities=16% Similarity=0.174 Sum_probs=64.6
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCC---CCC-CCCCccCCccccccCcccHHHHhhhcCEEE
Q 005830 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT---NMY-PSSSLLGQDKDASIAALPVDELIEKADGFA 567 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (675)
|+-|+..++|+.+++.|. .++++|--|......+-+..|+.. .+. +...+...... .+.-.. ..+-+.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L------~v~pyH-~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRL------LVRPYH-TQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcE------EeecCC-CCCccC
Confidence 567999999999999997 899999988877777777777632 000 01111000000 000000 001133
Q ss_pred ecCHH-HHHHHHHHHHhC-------CCEEEEECCCccCH-HHHHhCCccEEc
Q 005830 568 GVFPE-HKYEIVKRLQER-------KHICGMTGDGVNDA-PALKKADIGIAV 610 (675)
Q Consensus 568 r~~p~-~K~~iv~~l~~~-------~~~v~~iGDg~ND~-~al~~A~vgia~ 610 (675)
++.|. =|..++..++.. -..+.++|||.||. |+++...--++|
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 33222 367777666543 13799999999995 555554444555
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.38 E-value=0.42 Score=45.54 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=61.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
-|+ .+.++.|++. +++.++||.....+...-+..|+...... .+...+. -..+-.|+-=
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~--i~~~~~~-----------------~~~KP~p~~~ 148 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDA--VVAADDV-----------------QHHKPAPDTF 148 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceE--EEehhhc-----------------cCCCCChHHH
Confidence 344 6899999875 89999999999999988888988532110 0000000 0122334444
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
....+.+......+++|||..+|+.+-++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 455555554456789999999999999999884
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=90.88 E-value=0.76 Score=47.90 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=39.9
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q 005830 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (675)
Q Consensus 485 lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 533 (675)
=|++.-.+.+=|++.++|+.|++.|++++++|+....+...++ +.+|+.
T Consensus 36 DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 36 DGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred cCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 3666666777799999999999999999999999977766666 456763
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=90.81 E-value=0.49 Score=45.55 Aligned_cols=92 Identities=11% Similarity=0.117 Sum_probs=52.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC--
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF-- 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~-- 570 (675)
++.||+.+.++.|++.+ +.+++|.-+.......-+.+|+.... +. .+ + ..+.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f--------------~-----~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF--------------S-----EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc--------------c-----EEEEeccCcc
Confidence 36799999999999875 56677765444433344555553110 00 00 0 00111111
Q ss_pred -HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhC--CccE
Q 005830 571 -PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA--DIGI 608 (675)
Q Consensus 571 -p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A--~vgi 608 (675)
|+--..+++.+. ...++||||..+|+.+-++| ++-.
T Consensus 132 kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 132 KEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 322222333333 34688999999999999999 9854
|
2 hypothetical protein; Provisional |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.68 E-value=1 Score=44.97 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=55.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++-||+.++++.|++. +++.++|..+.. .+..|+..... ..+..... -..+-.|+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd--~i~~~~~~-----------------~~~KP~p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE--FVLRAGPH-----------------GRSKPFSD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc--eeEecccC-----------------CcCCCcHH
Confidence 4568999999999975 899999976543 14556532110 00000000 00111222
Q ss_pred HHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCccEEc
Q 005830 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV 610 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgia~ 610 (675)
-=...++.+.-....++||||. ..|+.+-++|++-...
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 2233344444445679999999 5999999999985443
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.27 E-value=1.6 Score=41.32 Aligned_cols=50 Identities=26% Similarity=0.377 Sum_probs=41.9
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HhCC
Q 005830 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGM 532 (675)
Q Consensus 483 ~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~---~~gi 532 (675)
.+-|.+.++|..-|++.++++.|++++.+|..+|.-..++-+.+.+ ++|+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4679999999999999999999999999999999777666555554 4565
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=88.32 E-value=3.7 Score=37.75 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=67.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHh-----CCCCCCCCCCCccCCccccccCcccHHHHhhhc
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRL-----GMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (675)
|..++++.+..+.+++.|++++-+|++..--+..+- +.. +++.. .+.- +...+-..+. .
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G-----pv~~-------sP~~l~~al~-r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG-----PVLL-------SPDSLFSALH-R 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC-----CEEE-------CCcchhhhhh-c
Confidence 689999999999999999999999999964443322 222 33211 1100 0000000000 1
Q ss_pred CEEEecCHHHHHHHHHHHHhC-----CCEEEEECCCccCHHHHHhCCcc
Q 005830 564 DGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 564 ~v~~r~~p~~K~~iv~~l~~~-----~~~v~~iGDg~ND~~al~~A~vg 607 (675)
.+..+-.-+.|...++.++.. ....+..|...+|+.+.++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 134444557899999988864 34678899999999999988774
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=87.64 E-value=0.38 Score=40.83 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=35.7
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 533 (675)
|++...+++=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455566778899999999999999999999988866655544 456764
|
... |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.62 E-value=3.3 Score=40.67 Aligned_cols=123 Identities=16% Similarity=0.194 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++-+++.++++.+++. ++++++|.-.........+++|+....... +.... .-+++-.|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v--~~s~~-----------------~g~~KP~~~ 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAV--FISED-----------------VGVAKPDPE 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheE--EEecc-----------------cccCCCCcH
Confidence 4568899999999988 999999987778888888999974321100 00000 001222333
Q ss_pred HHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCc-cEEcC-CccH--HHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADI-GIAVA-DATD--AARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~v-gia~~-~~~~--~a~~~ad~vl~~~~~~~i~~~i 637 (675)
-=..+.+.+.-....++||||. .||+..-++++. +|-+. .+.. ......|..+ .++..+..++
T Consensus 159 ~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 159 IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 3344455554446679999997 667466666666 44444 2211 1114556665 4566666554
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.07 E-value=1.6 Score=43.04 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=73.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++.||+.+.+++|++.|+.+.+.|+-....+..+.+..|+...... .+.+.+ ..-.+-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~--~v~~~d-----------------v~~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDV--IVTADD-----------------VARGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcch--hccHHH-----------------HhcCCCCC
Confidence 46789999999999999999999999999999999999998643111 000000 01123446
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
+-=..-.+.|.-....|+.+.|+.|.+.|-++|+.-+
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 6666666776556778999999999999999999854
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=83.82 E-value=1.4 Score=44.20 Aligned_cols=43 Identities=26% Similarity=0.255 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCEEEEECC----CccCHHHHHh-CCccEEcCCccH
Q 005830 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKK-ADIGIAVADATD 615 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~-A~vgia~~~~~~ 615 (675)
-+|..-++.|+ ....|+++|| |.||.+||+. .-.|+.+.+-.|
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37999999999 7788999999 8999999997 556888864333
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=83.69 E-value=1.7 Score=43.01 Aligned_cols=80 Identities=21% Similarity=0.175 Sum_probs=53.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec-
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV- 569 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~- 569 (675)
.=|++.+.++.+++.|++|+.+||++.. .+..--++.|+... . .++-|.
T Consensus 116 aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~-----------------------~l~lr~~ 168 (229)
T PF03767_consen 116 AIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW----D-----------------------HLILRPD 168 (229)
T ss_dssp EETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB----S-----------------------CGEEEEE
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc----c-----------------------hhccccc
Confidence 3478999999999999999999998753 33333445665321 0 011111
Q ss_pred -------CHHHHHHHHHHHHhCC-CEEEEECCCccCHHH
Q 005830 570 -------FPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (675)
Q Consensus 570 -------~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~a 600 (675)
..+-|..--+.+++.| ++++.+||..+|...
T Consensus 169 ~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 169 KDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp SSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1234777788888885 467889999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=82.32 E-value=2 Score=40.28 Aligned_cols=85 Identities=14% Similarity=0.044 Sum_probs=54.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcC-EEEecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKAD-GFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~r~~p 571 (675)
++.|++.++++ ++.++|.-+........+..|+... ++.++.... -..+-.|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~--------------------fd~v~~~~~~~~~KP~p 142 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWY--------------------FDRAFSVDTVRAYKPDP 142 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHH--------------------HhhhccHhhcCCCCCCH
Confidence 47889999998 3689998888888888888887432 111110000 0123334
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhC
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 604 (675)
+-=....+.+.-....++||||+..|+.+-+++
T Consensus 143 ~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 143 VVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 433555566655567799999999998876543
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=81.32 E-value=2.7 Score=42.70 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.8
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 005830 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (675)
Q Consensus 494 lr-~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 534 (675)
+| |++.+++++|+++|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999988888889999999974
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=80.80 E-value=8.6 Score=38.70 Aligned_cols=30 Identities=13% Similarity=0.374 Sum_probs=26.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLA 521 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~ 521 (675)
.|.=|++.+..+.+++.|++|+.+||+...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 456679999999999999999999999864
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.63 E-value=7.6 Score=36.66 Aligned_cols=98 Identities=15% Similarity=0.221 Sum_probs=56.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhh------cCEEE
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK------ADGFA 567 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~ 567 (675)
+.+++.+++..|+++|++++|+|.=+ ||.....+...+. .. .......++. ...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rgyf~~~~f~------~~-~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRGYFTEADFD------KL-HNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------CccccCccHHHHH------HH-HHHHHHHHHHcCCccceEEEC
Confidence 46899999999999999999999633 2211100000000 00 0000011110 01244
Q ss_pred ecCHHH--------HHHHHHHHHhCC---CEEEEECCCccCHHHHHhCCccEEc
Q 005830 568 GVFPEH--------KYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 568 r~~p~~--------K~~iv~~l~~~~---~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
...|++ ...+.+.+++.+ ....+|||...|..+-..|++. .+
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 444442 244555555543 6789999999999999999887 44
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.08 E-value=48 Score=40.08 Aligned_cols=271 Identities=15% Similarity=0.085 Sum_probs=146.7
Q ss_pred CccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005830 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 96 (675)
..+.++-+|..+++... .+.+..++-... ...++.+|..-+...+...-.+...+....... .
T Consensus 41 ~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~------------~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~ 104 (917)
T COG0474 41 PTTGLSEEEVKRRLKKYGPNELPEEKKRSL------------LKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----V 104 (917)
T ss_pred cccCCCHHHHHHHHhhcCCccccccccCcH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----c
Confidence 34567778888887754 333333222222 222333343333333322222233333221100 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCe------EEE----EECCeEEEEEcCCccCCcEEEecCCCe
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK------TKV----LRDGRWSEQDASILVPGDVISIKLGDI 166 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~V----~r~g~~~~i~~~~L~~GDiv~l~~G~~ 166 (675)
.+...+.++++..+..+...++..++-++++++....... ..+ +.-|....+...|.+|-|...++..+
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~- 183 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD- 183 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-
Confidence 3334444455555555778888878877777776543322 222 23588899999999999999999887
Q ss_pred eeeeEEEEecCCeeEeeccc--cCCCcccc---c---CCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCC
Q 005830 167 VPADARLLEGDPLKIDQSAL--TGESLPVT---K---NPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 238 (675)
Q Consensus 167 iPaD~~vl~g~~~~Vdes~L--TGEs~pv~---K---~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~ 238 (675)
.-+|=-.|.|++.-|+-... +.|..|.. + ..|..+.+|+-..--..+|.-+..|+.+..-...+. ..+.-.
T Consensus 184 l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~-~~t~l~ 262 (917)
T COG0474 184 LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE-VKTPLQ 262 (917)
T ss_pred ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccc-cCCcHH
Confidence 56676677775543333222 22333333 3 458888888844433445556666665544332211 222222
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 005830 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (675)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~ 306 (675)
..+.+....+..+.+...++.++...+.........+..++..++++.--++|..+-+++.++...-+
T Consensus 263 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 263 RKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 23444555555444433333333333321211234566777788888888999988888888876544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 675 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-104 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 8e-39 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-38 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-36 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-35 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 3e-22 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-22 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-22 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-22 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 5e-19 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 8e-19 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 5e-11 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 1e-05 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-08 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 3e-08 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 5e-06 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 9e-06 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-04 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 675 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-141 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-140 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-131 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-45 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-45 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-29 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 8e-29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 4e-28 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 7e-18 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 5e-16 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-15 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 4e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 1e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 1e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 2e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 4e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 4e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 7e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 9e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 992 bits (2566), Expect = 0.0
Identities = 579/658 (87%), Positives = 619/658 (94%)
Query: 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFL 67
SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG R+ +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 68 GFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAA 127
GFMWNPLSWVME AAIMAIALANG GR PDWQDFVGII LLVINSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 128 ALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT 187
ALMA LAPKTKVLRDG+WSEQ+A+ILVPGD++SIKLGDI+PADARLLEGDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 188 GESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247
GESLPVTK+P EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
IGNFCICSIA+G+V EII+MYP+Q RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLA 367
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVEK+ V+L A
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 368 ARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRAS 427
A ASR ENQDAIDAA+VGMLADPKEARAG+REVHFLPFNPVDKRTALTYID GNWHR S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 428 KGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487
KGAPEQIL L D+ KKV ++IDK+AERGLRSL VARQ +PEKTKESPGAPW+ VGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK 547
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 548 DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607
DA++A++PV+ELIEKADGFAGVFPEHKYEIVK+LQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 608 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSV 665
IAVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 660
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 914 bits (2364), Expect = 0.0
Identities = 262/673 (38%), Positives = 399/673 (59%), Gaps = 33/673 (4%)
Query: 4 DKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKV 63
D + EE + + R+ E++ + +R GLTS+E R +G N+++E+KE+
Sbjct: 56 DGHDAEEEEEEATPGGGRVVPEDMLQ--TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHF 113
Query: 64 LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123
LKFLGF P+ +VME AA++A L DW DF I LL++N+ + F++E AG
Sbjct: 114 LKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAG 166
Query: 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKID 182
+ L LA K VLRDG E +A +VPGD++ ++ G I+PAD R++ D L++D
Sbjct: 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVD 226
Query: 183 QSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHF 241
QSALTGESL V K+ D+VF+ S K+GE V+ ATG +TF G+AA LV++ GHF
Sbjct: 227 QSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHF 286
Query: 242 QKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVT 301
+VL IG + + ++ + + + ++ L + I G+P+ +P V++ T
Sbjct: 287 TEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTT 345
Query: 302 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKE 361
MA+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ GV+ E
Sbjct: 346 MAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPE 402
Query: 362 HVILLAARASRTENQ--DAIDAAIVGMLADPKEARAGVRE---VHFLPFNPVDKRTALTY 416
++L A A+ + + DAID A + L A++ + + + F PF+PV K+
Sbjct: 403 DLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVV 462
Query: 417 IDSDGNWHRASKGAPEQILALCN----CREDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472
G KGAP +L E+V + + +FA RG RSLGVAR+
Sbjct: 463 ESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-- 520
Query: 473 KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532
W+++G++P DPPRHD+ +T+ A LG+++KM+TGD + I +ET R+LG+
Sbjct: 521 ------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTG 592
GTN+Y + L + V + +E ADGFA VFP+HKY +V+ LQ+R ++ MTG
Sbjct: 575 GTNIYNAERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTG 633
Query: 593 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652
DGVNDAP+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y +
Sbjct: 634 DGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
Query: 653 YAVSITIRIVVSV 665
Y ++++I + + +
Sbjct: 694 YRIALSIHLEIFL 706
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 437 bits (1126), Expect = e-141
Identities = 180/761 (23%), Positives = 316/761 (41%), Gaps = 118/761 (15%)
Query: 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKLEE-KK 59
DK L+E+K E S+D ++ ++E+ + GLT+ L GPN L
Sbjct: 31 IDKKRDLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPT 90
Query: 60 ESKVLKFLGFMWNPLSWVMEAAAIMAIAL------ANGGGRDPDWQDFVGIIVLLVINST 113
+ +KF ++ S ++ AI+ + + V + ++++
Sbjct: 91 TPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150
Query: 114 ISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173
S+ +E + + + + V+RDG S +A +V GD++ +K GD +PAD R+
Sbjct: 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRI 210
Query: 174 LEGDPLKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVHT 223
+ K+D S+LTGES P T+ NP + F + C +G VV+ TG T
Sbjct: 211 ISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRT 270
Query: 224 FFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275
G+ A L ++ HF ++T +AV + I+ + +
Sbjct: 271 VMGRIATLASGLEVGRTPIAIEIEHFIHIITG--------VAVFLGVSFFILSLILGYSW 322
Query: 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335
+ + L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDK
Sbjct: 323 LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDK 382
Query: 336 TGTLTLNKLTV-----DRNLIEVFAKGVEKE--------------HVILLAARASRTENQ 376
TGTLT N++TV D + E + + L RA Q
Sbjct: 383 TGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQ 442
Query: 377 ------------DAIDAAIVGM----LADPKEARAGVREVHFLPFNPVDKR--TALTYID 418
DA ++A++ + R ++ +PFN +K +
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEK 502
Query: 419 SDGNWHRA-SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVAR 467
S + + KGAPE+IL C+ +ED+++ + G R LG
Sbjct: 503 SSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCH 562
Query: 468 QEIPEKT--------KESPGAPWQ---LVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 516
+PE + P P VGL+ + DPPR + + + + G+ V M+T
Sbjct: 563 FALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVT 622
Query: 517 GDQ----LAIGKETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVDE 558
GD AI K G P + +D A + L +
Sbjct: 623 GDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEV 682
Query: 559 LIEKADG-----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613
L + FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ +
Sbjct: 683 LDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIS 742
Query: 614 -TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653
+D ++ A+D++L + + I++ V R IF +K Y
Sbjct: 743 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 783
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 435 bits (1122), Expect = e-140
Identities = 188/762 (24%), Positives = 313/762 (41%), Gaps = 118/762 (15%)
Query: 2 GGDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEE-K 58
GG + LE +K E ++ ++ + E+ ++ + S +GL++ A L GPN L +
Sbjct: 35 GGKRKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPR 94
Query: 59 KESKVLKFLGFMWNPLSWVMEAAAIMAIALA---NGGGRDPDWQDFVGIIVLL---VINS 112
+ +KF + L +M AA + + G + + L+ V+
Sbjct: 95 GTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154
Query: 113 TISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172
+ +E + N A+ + + V+RDG + +A LV GD++ +K GD VPAD R
Sbjct: 155 CFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIR 214
Query: 173 LLEGDPLKIDQSALTGESLPVTK-------NPYDE---VFSGSTCKQGEIEAVVIATGVH 222
+L+ K+D S+LTGES P T+ +P + F + C +G + +V+ TG
Sbjct: 215 ILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDR 274
Query: 223 TFFGKAAHLVDSTN--------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRK 274
T G+ A L ++ HF ++ +A+ A I+
Sbjct: 275 TIIGRIASLASGVENEKTPIAIEIEHFVDIIAG--------LAILFGATFFIVAMCIGYT 326
Query: 275 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334
+ + + +++ +P + ++V +++ + RL+ + + K + A+E + V+CSD
Sbjct: 327 FLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSD 386
Query: 335 KTGTLTLNKLTV-----DRNLIEVFAKGVEKEHVI--------------LLAARASRTEN 375
KTGTLT N++TV D ++ + L RA+
Sbjct: 387 KTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSG 446
Query: 376 QDAIDAAIVGMLADPKEA------------RAGVRE----VHFLPFNPVDKR--TALTYI 417
QDA+ ++ D E G RE V +PFN +K + T
Sbjct: 447 QDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLE 506
Query: 418 DSDGNWHRA-SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVA 466
D H KGAPE++L C+ E R+ G R LG
Sbjct: 507 DPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFC 566
Query: 467 RQEIPEKTKESPGAPWQ-----------LVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515
+ + EK A GL+ + DPPR + + + G+ V M+
Sbjct: 567 QLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626
Query: 516 TGDQ----LAIGKETG--------RRLGMGTNMYPSSSLLGQDKDAS------IAALPVD 557
TGD AI G P + +D A + +
Sbjct: 627 TGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPS 686
Query: 558 ELIEKADG-----FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612
EL+E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A+
Sbjct: 687 ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI 746
Query: 613 A-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653
A +DAA++A+D++L + + I++ V R IF +K Y
Sbjct: 747 AGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAY 788
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 409 bits (1054), Expect = e-131
Identities = 201/768 (26%), Positives = 321/768 (41%), Gaps = 143/768 (18%)
Query: 23 PIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEA 80
EE S GLT D+ L +G N+L E+ +S + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 81 AAIMAIALA---NGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKT 137
AA ++ LA G + + I+++L+ N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 138 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLL--EGDPLKIDQSALTGESLPV 193
KV R R S Q A +VPGD++ + +GD VPAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 194 TKNP---YDE----------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN---- 236
K+ D +FSG+ G+ +V TGV T GK + +T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 237 ----QVGHFQKVLT-AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIG--- 288
++ F + L+ I C+ + I PV + G + +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINI---GHFNDPVHGGSWIRGAIYYFKIAVALAV 305
Query: 289 -GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD 347
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N+++V
Sbjct: 306 AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVC 365
Query: 348 R--------------NLIEVFAKGVEKEHVILLAARASRTENQDAIDA-AIVGMLA---- 388
+ N + E +L + R+ D + A + L
Sbjct: 366 KMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSS 425
Query: 389 --------------DPKEA-------RAGVREVHF------------------------- 402
+ E + V
Sbjct: 426 LDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFT 485
Query: 403 LPFNPVDKRTALTYIDSDGNWHRAS-----KGAPEQILALCNC----------REDVRKK 447
L F+ K ++ + + KGAPE ++ CN V++K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 448 VHAVIDKF--AERGLRSLGVARQEIPEKTKESPGAPWQ----------LVGLLPLFDPPR 495
+ +VI ++ LR L +A ++ P K +E VG++ + DPPR
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 496 HDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551
+ +I+ + G+ V MITGD +AI + G + + G++
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIG--IFGENEEVADRAYTGRE----F 659
Query: 552 AALPVDELIEKADG---FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
LP+ E E FA V P HK +IV+ LQ I MTGDGVNDAPALKKA+IGI
Sbjct: 660 DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGI 719
Query: 609 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 656
A+ T A++AS++VL + S I++AV RAI+ MK + Y +S
Sbjct: 720 AMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLIS 767
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 1e-45
Identities = 134/549 (24%), Positives = 219/549 (39%), Gaps = 119/549 (21%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 227
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 228 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 284
L D +V +F + + +I+ I I P+ L+
Sbjct: 315 PPIQRLAD---KVVAYFIPTVLLV------AISAFIYWYFIAHAPLLF-----AFTTLIA 360
Query: 285 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
+L+ P A PT L+V G + ++ G + K A+E + + DKTGTLT
Sbjct: 361 VLVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT 416
Query: 341 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 399
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 417 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 460
Query: 400 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 453
H + +K + G +G + + N R V +V ++
Sbjct: 461 -HGIELGEPEKVEVIA-----G------EGVVADGILVGNKRLMEDFGVAVSNEVELALE 508
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 513
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 509 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 555
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573
MITGD + R L +D +I A V P
Sbjct: 556 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 585
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 586 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 644
Query: 634 ISAVLTSRA 642
++A+ SR
Sbjct: 645 VAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 5e-45
Identities = 134/555 (24%), Positives = 224/555 (40%), Gaps = 119/555 (21%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179
G A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+
Sbjct: 119 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 180 KIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 227
+D+S ++GE +PV K+ DEVF + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 228 A--AHLVDSTNQV-GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLV 284
L D +V +F + T + +I+ I I P+ L+
Sbjct: 237 PPIQRLAD---KVVAYF--IPTVLL----VAISAFIYWYFIAHAPLLF-----AFTTLIA 282
Query: 285 LLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 340
+L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 283 VLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLT 338
Query: 341 LNKLTVDRNLIEVFAKGVEKEHVILLAARA-SRTENQDAIDAAIVGMLADPKEARAGVRE 399
K V ++ ++ ++ LAA A R+E+ A AIV K+A
Sbjct: 339 KGKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE---- 382
Query: 400 VHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------EDVRKKVHAVID 453
H + +K + +G + + N R V +V ++
Sbjct: 383 -HGIELGEPEKVEVIA-----------GEGVVADGILVGNKRLMEDFGVAVSNEVELALE 430
Query: 454 KFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVK 513
K ++ VAR ++ G++ + D + + ++ +G+ V
Sbjct: 431 KLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVG 477
Query: 514 MITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573
MITGD + R L +D +I A V P
Sbjct: 478 MITGDNWRSAEAISRELN------------------------LDLVI------AEVLPHQ 507
Query: 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633
K E VK+LQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +
Sbjct: 508 KSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDV 566
Query: 634 ISAVLTSRAIFQRMK 648
++A+ SR ++K
Sbjct: 567 VAAIQLSRKTMSKIK 581
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 71/335 (21%)
Query: 317 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI-LLAARASRTEN 375
+ A E + + DKTGTLT + V ++ ++ ++ + A+ +R+E+
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSEH 57
Query: 376 QDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIL 435
A AAIV +EA V++ A+ G +
Sbjct: 58 PIA--AAIV------EEAEK-----RGFGLTEVEEFRAIP-----GKGVEGIVN--GRRY 97
Query: 436 ALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493
+ + ++ K ++K ++G + + + ++ G++ L D
Sbjct: 98 MVVSPGYIRELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADR 144
Query: 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 553
R +S E I + +G+ M+TGD + K LG
Sbjct: 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG---------------------- 182
Query: 554 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613
+D+ A V P K E VK +Q++ M GDGVNDAPAL +AD+GIA+
Sbjct: 183 --LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIAIGAG 233
Query: 614 TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
TD A +DIVL + + V SR + +
Sbjct: 234 TDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 8e-29
Identities = 33/166 (19%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+ E + + PE K I+++L++ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 4e-28
Identities = 87/349 (24%), Positives = 139/349 (39%), Gaps = 87/349 (24%)
Query: 311 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARA 370
+ G + K A+E + + DKTGTLT K V ++ ++ ++ LAA A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAIA 70
Query: 371 -SRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKG 429
R+E+ A AIV K+A H + +K + G +G
Sbjct: 71 ERRSEHPIA--EAIV------KKALE-----HGIELGEPEKVEVIA-----G------EG 106
Query: 430 APEQILALCNCR------EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQ 483
+ + N R V +V ++K ++ VAR +
Sbjct: 107 VVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG-------------R 153
Query: 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPS 539
+ G++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------ 201
Query: 540 SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAP 599
+D +I A V P K E VK+LQ K + GDG+NDAP
Sbjct: 202 ----------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAP 238
Query: 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648
AL +AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 239 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 3e-25
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 33/167 (19%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
+ V LL + DP + + ETI G+ + M+TGD + LG
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG----------- 592
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
+ +++ A + PE K IV L+++ I M GDGVNDAPAL
Sbjct: 593 -------------IKKVV------AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALA 633
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649
KADIGIA+ TD A ++ + L L I A S + M N
Sbjct: 634 KADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 7e-18
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 123 GNAAAALMANLAPKT--KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLK 180
G+A AL+ L P++ ++ DG E + GD++ ++ G+ +P D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 181 IDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD----STN 236
+D+S +TGE +PV K +V + + G + G T + +V S
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 237 QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMP- 295
+ ++ F I V +++ I+ G+ + +LI IA P
Sbjct: 331 PIQRLADTVSGW--FVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLI----IACPC 384
Query: 296 -----TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNL 350
T +S+ + +G + +Q G + K A+E M ++ L DKTGTLT +
Sbjct: 385 ALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKL---- 438
Query: 351 IEVFAKGVEKEHVILLAA 368
+ +++ + LAA
Sbjct: 439 TRIVTDDFVEDNALALAA 456
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 5e-16
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 125 AAAALMANLAPKT-KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQ 183
A L+ L KT V+RDG+ + GD++ ++ G+ +P D ++EG+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 184 SALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
S ++GE +PV K+ DEVF + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 2e-15
Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 355 AKGVEKEHVILLAARASRTENQ--DAIDAAIV--GMLADPKEARAGVREVHFLPFNPVDK 410
G E V+ A S + + +D A++ + + +++ +PF+ +
Sbjct: 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR 69
Query: 411 RTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGL 460
R ++ ++ + KGA ++IL +C+ + + +K+ V D +GL
Sbjct: 70 RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 461 RSLGVARQEIPEKTKE-SPGAPWQLV--GLLPLFDPPRH 496
R + VA + +P + + L+ G + D H
Sbjct: 130 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-14
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 121 NAGNAAAALMANLAPKT-KVLRDGRWSEQDASILVP------GDVISIKLGDIVPADARL 173
A A L+ +L ++ + + V GD+I + G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGV 221
+EG +D+S +TGE++PV K P V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 6e-09
Identities = 105/709 (14%), Positives = 202/709 (28%), Gaps = 228/709 (32%)
Query: 24 IEEVFEQ-----LKCS------REGLTSDEGAHRLHVFGPNK----------LEEKKESK 62
I VFE C + L+ +E H + + L K+E
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS--KDAVSGTLRLFWTLLSKQEEM 78
Query: 63 VLKFLGFMWNP-LSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121
V KF+ + ++M I R P T +IE+
Sbjct: 79 VQKFVEEVLRINYKFLMS-----PIKTEQ---RQPS-------------MMTRMYIEQ-- 115
Query: 122 AGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDV--------ISIKLGDIVPADARL 173
RD ++ D + +V + L ++ PA L
Sbjct: 116 -------------------RDRLYN--DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 174 LEGDPLKIDQSALTGESL---PVTKNPYDEVF--SGSTCKQGEIEAVVIATGVHTFFGKA 228
++G L ++ + + V ++F + C E ++ ++
Sbjct: 155 IDGV-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 229 AHLVD-STNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLI 287
D S+N + + ++ + Y + LLVLL
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRL------------------LKSKPYENC---LLVLL- 251
Query: 288 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK---- 343
+ + + L +T R + D L + T ++L+
Sbjct: 252 ---NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHISLDHHSMT 297
Query: 344 LTVDRNLIEVFAK--GVEKE------------HVILLAAR----ASRTEN-----QDAID 380
LT D + K + + ++A + +N D +
Sbjct: 298 LTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356
Query: 381 AAIVGMLA--DPKEARAGVREVHFLPFN--PVDKRTALTYIDSDGNWHRASKGAPEQILA 436
I L +P E R F + P +I P +L+
Sbjct: 357 TIIESSLNVLEPAEYRK-----MFDRLSVFPPS-----AHI-------------PTILLS 393
Query: 437 L--CNC-REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493
L + + DV V++K + L V +Q P+++ S + +
Sbjct: 394 LIWFDVIKSDVMV----VVNKLHKYSL----VEKQ--PKESTIS------IPSIYLELKV 437
Query: 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA 553
+ R + D I K + S L+ D +
Sbjct: 438 KLENEYALHRSIV-----------DHYNIPKT-----------FDSDDLIPPYLDQYFYS 475
Query: 554 -----LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608
L E E+ F VF + ++ + ++++ +G +N LK I
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRF-LEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 609 AVADATDAARSASDIV--LTEPGLSVIIS--AVLTSRAIFQRMKNYTIY 653
D R + I+ L + ++I S L A+ ++ I+
Sbjct: 535 CDNDPKY-ERLVNAILDFLPKIEENLICSKYTDLLRIALMA--EDEAIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 2e-07
Identities = 62/439 (14%), Positives = 131/439 (29%), Gaps = 109/439 (24%)
Query: 292 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE---------MAGMDVLCSDKTGTLTLN 342
I +S T+ + LS+Q + ++ +EE M+ + + +
Sbjct: 55 IMSKDAVSGTLRLFWTLLSKQEEMVQK--FVEEVLRINYKFLMSPIKTEQRQPSMMTRMY 112
Query: 343 KLTVDR--NLIEVFAKG-VEKEHVILLAARASRTENQDAIDAAIVGM-------LA---- 388
DR N +VFAK V + L R + E + A + I G+ +A
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPYL-KLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171
Query: 389 -DPKEARAGVREVHFLPFNPVDKRTALT------YIDSDGNWHRASKGAPEQILALCNCR 441
K ++ +L + + D NW S + L + + +
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231
Query: 442 EDVRK----KVHA-------------VIDKFAE--RGL---RSLGVARQEIPEKTKESPG 479
++R+ K + + F + L R V T
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS- 290
Query: 480 APWQLVGLLPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIGKETGRRLGMGTNM 536
L P + + + L+ +++T + + + G
Sbjct: 291 ----LDHHSMTLTPD--EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLAT 343
Query: 537 YPSSSLLGQDK-----DASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMT 591
+ + + DK ++S+ L E + D + VFP
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS-VFPPS------------------ 384
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 651
A I + + D++ ++ + +++ + + ++ K T
Sbjct: 385 ------------AHIPTILL-----SLIWFDVIKSDVMV--VVNKLHKYSLVEKQPKEST 425
Query: 652 IYAVSITIRIVVSVPNILQ 670
I SI + + V + N
Sbjct: 426 ISIPSIYLELKVKLENEYA 444
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 4e-06
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K V ++ + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 628 PG 629
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+ K +K+ E + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 628 PG 629
PG
Sbjct: 145 PG 146
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+K L E+ I GD + D P ++K + +AVADA +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 628 PG 629
G
Sbjct: 160 AG 161
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 1e-05
Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K + L I GD +NDA LK+ I A A R S I L +
Sbjct: 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEK 137
Query: 628 PG 629
G
Sbjct: 138 RG 139
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 2e-05
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K EI ++++E+ + G GD V D +KK +AV +A + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 628 PG 629
G
Sbjct: 143 NG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K + L++ + GD + D P +++ +G+AV++A +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 628 PG 629
G
Sbjct: 153 TG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Query: 572 EHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
K L GD + D P + + + +AVADA + V
Sbjct: 123 SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRI 182
Query: 628 PG 629
G
Sbjct: 183 KG 184
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 4e-05
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 28/128 (21%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
I+ + GV +I+G + AI + + LG+ +++ DK + L D+L+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLFQGRE----DK---LVVL--DKLLA 104
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 621
+ + E GD + D P +++ +G+AVA+A R +
Sbjct: 105 E----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHA 146
Query: 622 DIVLTEPG 629
+ G
Sbjct: 147 HGITRAQG 154
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 4e-05
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
I+ ++ + V +++G I + LG+ + +K A +L++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFFLGKL----EK---ETAC--FDLMK 93
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSAS 621
+ AGV E GD D PA AVADA ++A
Sbjct: 94 Q----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 135
Query: 622 DIVLTEPG 629
D VL+ G
Sbjct: 136 DHVLSTHG 143
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 36/132 (27%)
Query: 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIE 561
++ +N G+ + +ITG + + R+ AL + +
Sbjct: 61 VKALMNAGIEIAIITGRR---SQIVENRM---------------------KALGISLI-- 94
Query: 562 KADGFAGVFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 617
+ G + K + + ++ I G GD + D P ++K + + VAD
Sbjct: 95 ----YQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL 148
Query: 618 RSASDIVLTEPG 629
++ V G
Sbjct: 149 AQRANYVTHIKG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 31/196 (15%), Positives = 54/196 (27%), Gaps = 25/196 (12%)
Query: 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSL-GVARQEIPEK 473
T +D + AP + +AL ++ V K ++ + L ++EI
Sbjct: 16 TITMNDNIINIMKTFAPPEWMAL---KDGVLSKTLSIKEGVGRM-FGLLPSSLKEEITSF 71
Query: 474 TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533
E R E + + +I+G +
Sbjct: 72 VLEDA--------------KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK 117
Query: 534 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593
+Y + + D G K ++ L E M GD
Sbjct: 118 DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIMIGD 171
Query: 594 GVNDAPALKKADIGIA 609
V D A K +D+ A
Sbjct: 172 SVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 625 LTEPGLSVII 634
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ K EI++++ + + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 625 LTEPGLSVII 634
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
V + K +I+ L ++ + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 625 LTEPGLSVII 634
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 569 VFPEHKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ +K + + L R +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 625 LTEPGLSVII 634
+ G +++
Sbjct: 301 INYHGFELLL 310
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 9e-04
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
GD ND P + A+ATD ++ SD V
Sbjct: 176 GDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 208
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 675 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.96 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.96 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.95 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.94 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.85 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.76 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.48 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.37 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.31 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.23 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.21 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.21 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.21 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.15 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.13 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 99.02 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.01 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.96 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.93 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.9 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.9 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.84 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.83 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.82 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.81 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.81 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.8 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.8 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.79 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.79 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.79 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.77 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.76 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.74 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.66 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.66 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.63 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.6 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.6 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.56 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.46 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.43 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.4 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.39 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.38 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.36 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.35 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.34 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.33 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.33 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.31 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.3 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.28 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.27 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.27 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.27 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.25 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 98.24 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.24 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.22 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.21 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.21 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.21 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.2 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.2 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.18 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.17 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.16 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.16 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.13 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.12 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.12 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.11 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.1 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.1 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.06 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.05 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.03 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.98 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.97 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.97 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.96 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.96 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.96 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.95 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.95 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.92 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.91 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.91 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.9 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.9 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.9 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.88 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.87 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.84 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.84 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.81 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.78 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.77 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.75 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.74 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.71 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.66 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.55 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.45 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.43 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.39 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.37 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.32 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.31 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 97.3 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.18 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.16 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.16 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.13 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.07 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.99 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.97 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.94 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.91 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.74 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.73 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.62 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.62 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.56 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.35 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.29 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.26 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.96 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.92 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.87 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.65 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.62 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 95.31 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.27 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.67 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.63 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 93.18 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 92.89 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 91.97 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 90.78 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 90.22 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 89.56 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 89.25 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 87.52 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 85.4 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 85.04 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 84.92 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 83.23 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 82.49 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 81.27 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-119 Score=1040.66 Aligned_cols=660 Identities=88% Similarity=1.308 Sum_probs=581.5
Q ss_pred hHhhhccccCccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005830 9 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (675)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (675)
+++.+++..++|.++.+|+++.|+++.+|||++|+.+|+++||+|+++.++++.|+.|++||++|+++++++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l 83 (885)
T 3b8c_A 4 LEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIAL 83 (885)
T ss_dssp --------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGS
T ss_pred hhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666677889999999999999999889999999999999999999998888898999999999999999999999887
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeee
Q 005830 89 ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVP 168 (675)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iP 168 (675)
+...+.+..|.+++.++++++++..+++++++++++++++|++..+++++|+|||++++|++++|+|||+|.|++||+||
T Consensus 84 ~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IP 163 (885)
T 3b8c_A 84 ANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIP 163 (885)
T ss_dssp SCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCS
T ss_pred HhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEe
Confidence 65444556888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCCCchHHHHHHH
Q 005830 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (675)
Q Consensus 169 aD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~~~~~~~~~~ 248 (675)
|||+|++|+++.||||+|||||.|+.|.+||.+|+||.+.+|.+.++|++||.+|.+|++.+++++..+++++++.++++
T Consensus 164 aDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i 243 (885)
T 3b8c_A 164 ADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243 (885)
T ss_dssp SCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHH
T ss_pred eceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHH
Confidence 99999999777899999999999999999999999999999999999999999999999999887767788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCc
Q 005830 249 GNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 328 (675)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v 328 (675)
+.+++..+++++++.+++.|.....+|..++..++++++++|||+||++++++++.++.+|+++|+++|++.++|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v 323 (885)
T 3b8c_A 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 323 (885)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCC
Confidence 87754434332333223344444567888899999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCcc
Q 005830 329 DVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPV 408 (675)
Q Consensus 329 ~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~ 408 (675)
|+||||||||||+|+|++.+..+..+..+.+.++++.+++.++....+||++.|+++++.++.+.+..++.++.+||+|.
T Consensus 324 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~ 403 (885)
T 3b8c_A 324 DVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPV 403 (885)
T ss_dssp CCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTT
T ss_pred CEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcc
Confidence 99999999999999999975432223345567788888887776556799999999988765444556778889999999
Q ss_pred CcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEe
Q 005830 409 DKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLL 488 (675)
Q Consensus 409 ~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i 488 (675)
+|+|+++++..+|+.+.++|||||.++++|+.+...++.+.+.+++++++|+|++++|++++++.+.+..|++++|+|++
T Consensus 404 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli 483 (885)
T 3b8c_A 404 DKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL 483 (885)
T ss_dssp TCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEE
T ss_pred cceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEE
Confidence 99999988776788889999999999999986555566778889999999999999999999887777889999999999
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 489 ~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
+++||+||+++++|++|+++||+++|+|||+..+|.++|+++||..+..+...+.+.+.+..+++.++++.+++..+|+|
T Consensus 484 ~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~ar 563 (885)
T 3b8c_A 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAG 563 (885)
T ss_dssp EECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEEC
T ss_pred EeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEE
Confidence 99999999999999999999999999999999999999999999765444455555555545677889999999999999
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHH
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 648 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~ 648 (675)
++|+||.++|+.+|++|+.|+|+|||.||+|||++||+||||++|+++++++||+++.+++|+++++++++||++|+||+
T Consensus 564 v~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~ 643 (885)
T 3b8c_A 564 VFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 643 (885)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHH
Q 005830 649 NYTIYAVSITIRIVVSVPNI 668 (675)
Q Consensus 649 ~~i~~~~~~n~~~~~~~~~~ 668 (675)
+++.|++++|+..++.++++
T Consensus 644 ~~i~~~l~~n~~~~~~~~~~ 663 (885)
T 3b8c_A 644 NYTIYAVSITIRIVFGFMLI 663 (885)
T ss_dssp HHHHHHHHHTTTTTSTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999998654444433
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-110 Score=964.01 Aligned_cols=617 Identities=42% Similarity=0.697 Sum_probs=539.3
Q ss_pred HHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHH
Q 005830 28 FEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIV 106 (675)
Q Consensus 28 ~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~ 106 (675)
.+.|+++ .+|||++|+.+|+++||+|+++.+++++|..|+++|++|++++++++++++++++ .|.++.++++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHH
Confidence 3567887 6899999999999999999999888899999999999999999999999888743 7888888888
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCC-eeEeecc
Q 005830 107 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSA 185 (675)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~-~~Vdes~ 185 (675)
+++++.++++++++++++++++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999974 8999999
Q ss_pred ccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 186 LTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEI 264 (675)
Q Consensus 186 LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 264 (675)
|||||.|+.|.+||.+|+||.+.+|.+.++|++||.+|.+|++.+++++++ +++++++.+++++.+++.++++.+++.+
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988764 6789999999999876655444333322
Q ss_pred HHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCce
Q 005830 265 IIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 344 (675)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~ 344 (675)
+ .|+....+|...+..++++++++|||+||++++++++.++.+|+++|+++|++.++|+||++++||||||||||+|+|
T Consensus 310 ~-~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 310 V-SSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp H-TTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred H-HHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 2 233345678889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeecccCCCcHHHHHHHHHHccccCc--ChHHHHHHhhcCC---hHHHhcCCcEEEEecCCccCcceEEEEEcC
Q 005830 345 TVDRNLIEVFAKGVEKEHVILLAARASRTENQ--DAIDAAIVGMLAD---PKEARAGVREVHFLPFNPVDKRTALTYIDS 419 (675)
Q Consensus 345 ~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~ai~~~~~~---~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~ 419 (675)
++.++.. ..+.++++++..++.+...... ||++.|++.++.. .......++.++.+||++.+|+|+++++..
T Consensus 389 ~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~ 465 (920)
T 1mhs_A 389 SLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP 465 (920)
T ss_dssp CCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCS
T ss_pred eEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeC
Confidence 9988653 2244555666555544433333 9999999886421 111234578899999999999999998777
Q ss_pred CCcEEEEEcCcHHHHHHhccC----ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCC
Q 005830 420 DGNWHRASKGAPEQILALCNC----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (675)
Q Consensus 420 ~g~~~~~~kGa~e~i~~~~~~----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr 495 (675)
+|+.++++|||||.++++|+. +++.++.+.+.+++++++|+|++++|++. .|.+|+|+|+++++||+|
T Consensus 466 ~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R 537 (920)
T 1mhs_A 466 QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPR 537 (920)
T ss_dssp SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCC
T ss_pred CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEecccc
Confidence 788889999999999999975 34556778888999999999999999984 156889999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC--CccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS--SLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
|+++++|++||++||+++|+|||++.||.++|+++||........ .+.+. ..++++++.+.+++..+|+|++|+|
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 999999999999999999999999999999999999974322111 12222 3455667777888889999999999
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~ 653 (675)
|.++|+.+|++|+.|+|+|||.||+|||++|||||||++|+++++++||+++++++|+++++++++||++|+|+++++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHH
Q 005830 654 AVSITIRIVVSVP 666 (675)
Q Consensus 654 ~~~~n~~~~~~~~ 666 (675)
.++.|+...+.++
T Consensus 695 ~l~~n~~~~~~~~ 707 (920)
T 1mhs_A 695 RIALSIHLEIFLG 707 (920)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999987644333
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-108 Score=971.70 Aligned_cols=657 Identities=25% Similarity=0.407 Sum_probs=555.5
Q ss_pred Hhhhcc-ccCccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHH
Q 005830 10 EEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAI 86 (675)
Q Consensus 10 ~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ 86 (675)
++.+.+ .++||.++.+++++.|+++ .+|||++|+.+|+++||+|+++.++ .++|..|++||++|+++++++++++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~ 117 (1028)
T 2zxe_A 38 DELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCF 117 (1028)
T ss_dssp CTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHH
T ss_pred HHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 344444 6789999999999999999 7899999999999999999999875 778999999999999999999999998
Q ss_pred HHhc----CCC--CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEE
Q 005830 87 ALAN----GGG--RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVIS 160 (675)
Q Consensus 87 ~~~~----~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~ 160 (675)
+++. ... ...+|+++++++++++++.++++++++|++++++++++..+++++|+|||++++|++++|+|||+|.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~ 197 (1028)
T 2zxe_A 118 LAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVE 197 (1028)
T ss_dssp HHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEE
T ss_pred HHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEE
Confidence 7642 011 1235777888888999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCC----------ccccceeeeeceEEEEEEEecchhhhhhhhh
Q 005830 161 IKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAH 230 (675)
Q Consensus 161 l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~ 230 (675)
|++||+|||||+|++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+
T Consensus 198 l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~ 277 (1028)
T 2zxe_A 198 VKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIAT 277 (1028)
T ss_dssp EETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHH
T ss_pred ECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHH
Confidence 999999999999999977899999999999999999886 4999999999999999999999999999999
Q ss_pred hhhcc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHH
Q 005830 231 LVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 309 (675)
Q Consensus 231 ~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l 309 (675)
++..+ .+++++++.++++..++..+.++.+++.+++. .+...+|..++..++++++++|||+||++++++++.++.+|
T Consensus 278 ~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m 356 (1028)
T 2zxe_A 278 LASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM 356 (1028)
T ss_dssp HHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH
T ss_pred hccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 98776 47899999999999886655544343333332 23456788888999999999999999999999999999999
Q ss_pred hhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecc---cC----------CCc---HHHHHHHHHHccc
Q 005830 310 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA---KG----------VEK---EHVILLAARASRT 373 (675)
Q Consensus 310 ~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---~~----------~~~---~~~l~~~~~~~~~ 373 (675)
+++|++||+++++|+||++++||||||||||+|+|+|.+++..... .+ ... ..++..++.++..
T Consensus 357 ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~ 436 (1028)
T 2zxe_A 357 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRA 436 (1028)
T ss_dssp HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCC
T ss_pred hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999987642110 00 011 1344444443210
Q ss_pred ---------------cCcChHHHHHHhhcC----ChHHHhcCCcEEEEecCCccCcceEEEEEcC---CCcEEEEEcCcH
Q 005830 374 ---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASKGAP 431 (675)
Q Consensus 374 ---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~---~g~~~~~~kGa~ 431 (675)
..++|.+.|++.++. +....+..++.++.+||+|.+|||+++++.. +|++++++||||
T Consensus 437 ~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~ 516 (1028)
T 2zxe_A 437 VFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAP 516 (1028)
T ss_dssp EECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECH
T ss_pred eeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCc
Confidence 124788889987763 3333455688999999999999999998863 578899999999
Q ss_pred HHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC-----------CCCCCCcEEEEEecc
Q 005830 432 EQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQLVGLLPL 490 (675)
Q Consensus 432 e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-----------~~~e~~l~~lG~i~~ 490 (675)
|.|+++|+. +++.++.+.+.+++++++|+||+++|+++++..+. +..|.+++|+|++++
T Consensus 517 e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i 596 (1028)
T 2zxe_A 517 ERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAM 596 (1028)
T ss_dssp HHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEE
T ss_pred HHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeecc
Confidence 999999963 34566788889999999999999999998865321 234789999999999
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC----------------------CCccCCccc
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS----------------------SSLLGQDKD 548 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~----------------------~~~~~~~~~ 548 (675)
+||+|++++++|++|+++||+++|+|||+..+|.++|+++||....... ..+.+ ...
T Consensus 597 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G-~~l 675 (1028)
T 2zxe_A 597 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHG-SDL 675 (1028)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEH-HHH
T ss_pred CCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEc-HHh
Confidence 9999999999999999999999999999999999999999997431110 00011 111
Q ss_pred cccCcccHHHHhhhcC--EEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhccCEEe
Q 005830 549 ASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVL 625 (675)
Q Consensus 549 ~~~~~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl 625 (675)
..+..+.+++++.+.. +|+|++|+||..+|+.+|+.|+.|+|+|||.||+|||++|||||||| +|++.++++||+++
T Consensus 676 ~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl 755 (1028)
T 2zxe_A 676 KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMIL 755 (1028)
T ss_dssp TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEE
T ss_pred hhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEe
Confidence 1234455667776665 99999999999999999999999999999999999999999999999 79999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 005830 626 TEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNI 668 (675)
Q Consensus 626 ~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 668 (675)
.+++|++|++++++||++|+|+++++.|.+++|+..+++.+++
T Consensus 756 ~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~ 798 (1028)
T 2zxe_A 756 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVF 798 (1028)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999876555443
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-107 Score=968.88 Aligned_cols=663 Identities=25% Similarity=0.389 Sum_probs=558.3
Q ss_pred cchHhhhcc-ccCccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHH
Q 005830 7 ISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAI 83 (675)
Q Consensus 7 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i 83 (675)
.++++.+.+ .++||.++.+|+++.|+++ .+|||++|+.+|+++||+|+++.++ .++|+.|++||++|++++++++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~ 119 (1034)
T 3ixz_A 40 EKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAA 119 (1034)
T ss_pred hhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHH
Confidence 456677777 8889999999999999999 6899999999999999999999876 577899999999999999999999
Q ss_pred HHHHHhc---CCC---CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCc
Q 005830 84 MAIALAN---GGG---RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGD 157 (675)
Q Consensus 84 ~~~~~~~---~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GD 157 (675)
++++... ..+ ...+|+++++++++++++.++.+++++|++++++++++..+++++|+|||++++|++++|+|||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GD 199 (1034)
T 3ixz_A 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGD 199 (1034)
T ss_pred HHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCc
Confidence 8887531 111 1235777888888999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC----------CccccceeeeeceEEEEEEEecchhhhhh
Q 005830 158 VISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (675)
Q Consensus 158 iv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~ 227 (675)
||.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |.+|+||.+.+|.+.++|++||.+|.+|+
T Consensus 200 iV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~Gk 279 (1034)
T 3ixz_A 200 LVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGR 279 (1034)
T ss_pred EEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhH
Confidence 99999999999999999997889999999999999999765 56899999999999999999999999999
Q ss_pred hhhhhhcc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 005830 228 AAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (675)
Q Consensus 228 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~ 306 (675)
+.+++... .+++++++.++++..++..++++.+++.++ .+...+.+|...+..++++++++|||+||++++++++.++
T Consensus 280 I~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~ 358 (1034)
T 3ixz_A 280 IASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFI-VAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA 358 (1034)
T ss_pred HHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHH
Confidence 99988775 467899999999988765544443333222 3334567888999999999999999999999999999999
Q ss_pred HHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCC-------------Cc---HHHHHHHHHH
Q 005830 307 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV-------------EK---EHVILLAARA 370 (675)
Q Consensus 307 ~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~-------------~~---~~~l~~~~~~ 370 (675)
.||+++|++||+++++|+||++++||||||||||+|+|+|.++++....... .. ..++..++.+
T Consensus 359 ~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc 438 (1034)
T 3ixz_A 359 KRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLC 438 (1034)
T ss_pred HHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999987653211100 01 1333333333
Q ss_pred ccc---------------cCcChHHHHHHhhcC----ChHHHhcCCcEEEEecCCccCcceEEEEEcC---CCcEEEEEc
Q 005830 371 SRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRASK 428 (675)
Q Consensus 371 ~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~---~g~~~~~~k 428 (675)
+.. ..++|.+.|++.++. +....+..++.++.+||+|.+|+|++++... ++++++++|
T Consensus 439 ~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~K 518 (1034)
T 3ixz_A 439 NRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMK 518 (1034)
T ss_pred ccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEe
Confidence 211 124788888887652 3444566788999999999999998877643 367899999
Q ss_pred CcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC-----------CCCCCCcEEEEE
Q 005830 429 GAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQLVGL 487 (675)
Q Consensus 429 Ga~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-----------~~~e~~l~~lG~ 487 (675)
||||.|+++|+. +++.++.+.+..++++.+|+||+++|++.++..+. +..|++|+|+|+
T Consensus 519 GApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGl 598 (1034)
T 3ixz_A 519 GAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGL 598 (1034)
T ss_pred CChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEE
Confidence 999999999963 34567788899999999999999999998875421 235789999999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC---------------------CCccCCc
Q 005830 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS---------------------SSLLGQD 546 (675)
Q Consensus 488 i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~---------------------~~~~~~~ 546 (675)
++++||+|++++++|++|+++||+++|+|||+..+|.++|+++||....... .....+.
T Consensus 599 v~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 599 VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM 678 (1034)
T ss_pred EeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence 9999999999999999999999999999999999999999999996432100 0011111
Q ss_pred cccccCcccHHHHhhhc--CEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhccCE
Q 005830 547 KDASIAALPVDELIEKA--DGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDI 623 (675)
Q Consensus 547 ~~~~~~~~~~~~~~~~~--~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~ 623 (675)
....++.+++.+.+... .+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||+||||| +|++.+|++||+
T Consensus 679 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 679 QLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADM 758 (1034)
T ss_pred hhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCE
Confidence 11223444555555554 499999999999999999999999999999999999999999999999 999999999999
Q ss_pred EecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 005830 624 VLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQ 670 (675)
Q Consensus 624 vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 670 (675)
|+.++++++++.++++||++|+|+++++.|.+++|+..++..+++.+
T Consensus 759 Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~ 805 (1034)
T 3ixz_A 759 ILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYIT 805 (1034)
T ss_pred EeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987766655443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-105 Score=947.08 Aligned_cols=650 Identities=29% Similarity=0.415 Sum_probs=542.9
Q ss_pred CccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC---
Q 005830 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGG--- 92 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 92 (675)
+||.++.+++++.|+++ .+|||++|+++|+++||+|+++.++ +++|+.|++||++|++++++++++++++++...
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 48999999999999998 6799999999999999999999875 678899999999999999999999999876422
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCe--EEEEEcCCccCCcEEEecCCCeeeee
Q 005830 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR--WSEQDASILVPGDVISIKLGDIVPAD 170 (675)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~--~~~i~~~~L~~GDiv~l~~G~~iPaD 170 (675)
+....|+++++++++++++.++++++++|+++++++|++..+++++|+|||+ +++|++++|+|||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 1123678888888888999999999999999999999999999999999887 69999999999999999999999999
Q ss_pred EEEEe--cCCeeEeeccccCCCcccccCCC-------------CccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc
Q 005830 171 ARLLE--GDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (675)
Q Consensus 171 ~~vl~--g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~ 235 (675)
|+|++ ++.+.||||+|||||.|+.|.++ |.+|+||.+.+|.+.++|++||.+|.+|++.+++..+
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 99965 44689999999999999999987 6899999999999999999999999999999998876
Q ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c----cccchH----HHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 005830 236 -NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYP-V----QHRKYR----DGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (675)
Q Consensus 236 -~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~~~~~~----~~~~~~~~ll~~~iP~~l~~~~~~~~~~~ 305 (675)
.+++++++.+++++.++..++++.+++.+++++. + ...+|. ..+..++++++++|||+||++++++++.+
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 4789999999999988665554444333333221 1 112232 24557788999999999999999999999
Q ss_pred HHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeec--------------ccCCC------------
Q 005830 306 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF--------------AKGVE------------ 359 (675)
Q Consensus 306 ~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~--------------~~~~~------------ 359 (675)
+.+|+++|+++|+++++|+||++++||||||||||+|+|+|.++..... .....
T Consensus 324 ~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 403 (995)
T 3ar4_A 324 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPI 403 (995)
T ss_dssp HHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEEC
T ss_pred HHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccc
Confidence 9999999999999999999999999999999999999999998764210 00000
Q ss_pred ----cH---HHHHHHHHHccc------------cCcChHHHHHHhhcCCh-------H-------------HHhcCCcEE
Q 005830 360 ----KE---HVILLAARASRT------------ENQDAIDAAIVGMLADP-------K-------------EARAGVREV 400 (675)
Q Consensus 360 ----~~---~~l~~~~~~~~~------------~~~~~~~~ai~~~~~~~-------~-------------~~~~~~~~~ 400 (675)
.+ .++..++.+... ..++|.+.|++.++... . ..+..++.+
T Consensus 404 ~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 404 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp CGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred cccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceE
Confidence 01 122222332211 11589999887544210 0 123457889
Q ss_pred EEecCCccCcceEEEEEcCCC-----cEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHH--HHcCCeEE
Q 005830 401 HFLPFNPVDKRTALTYIDSDG-----NWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKF--AERGLRSL 463 (675)
Q Consensus 401 ~~~~f~~~~k~~sv~~~~~~g-----~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~r~l 463 (675)
+.+||+|.+|||+++++..+| +..+|+|||||.|+++|+. +++.++.+.+.++++ +++|+||+
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvL 563 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 563 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEE
Confidence 999999999999999987665 5789999999999999963 345567788889999 99999999
Q ss_pred EEEeeccCCcC----------CCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 464 GVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 464 ~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
++||++++..+ ++..|++++|+|+++++|++|++++++|+.|+++||+++|+|||+..+|.++|+++||.
T Consensus 564 a~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp EEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred EEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcC
Confidence 99999886432 12347899999999999999999999999999999999999999999999999999996
Q ss_pred CCCCC--CCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC
Q 005830 534 TNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (675)
Q Consensus 534 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~ 611 (675)
..... ...+.+ .....++.+.+.+.+.+..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||+|||||
T Consensus 644 ~~~~~i~~~~~~g-~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg 722 (995)
T 3ar4_A 644 GENEEVADRAYTG-REFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722 (995)
T ss_dssp CTTCCCTTTEEEH-HHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred CCCCcccceEEEc-hhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC
Confidence 53211 111222 222234455677788889999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 005830 612 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNI 668 (675)
Q Consensus 612 ~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 668 (675)
+|++.++++||+++.+++|+++++++++||++|+|+++++.|.+++|+..++.++++
T Consensus 723 ~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~ 779 (995)
T 3ar4_A 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLT 779 (995)
T ss_dssp TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999776555443
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-86 Score=756.88 Aligned_cols=508 Identities=23% Similarity=0.358 Sum_probs=448.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEE-CCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~ 175 (675)
+|..+.+++++++++.+++...+.|+++++++|+++.|.+++++| ||++++|++++|+|||+|+|++||+|||||+|++
T Consensus 187 yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 266 (736)
T 3rfu_A 187 YFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE 266 (736)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE
Confidence 444555777889999999999999999999999999999999888 9999999999999999999999999999999999
Q ss_pred cCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-CCCCchHHHHHHHHHHHHH
Q 005830 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCIC 254 (675)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 254 (675)
| .+.||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|++||.+|.++++.++++++ .+++++++.+++++.+++.
T Consensus 267 G-~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~ 345 (736)
T 3rfu_A 267 G-RSFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVP 345 (736)
T ss_dssp S-CEEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHH
T ss_pred C-ceEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHH
Confidence 9 5789999999999999999999999999999999999999999999999999999876 4778999999999998777
Q ss_pred HHHHHHHHHHHHHHhccc-cchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEe
Q 005830 255 SIAVGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 333 (675)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~ 333 (675)
++++.+++.+++|++... ..|..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|++|++|++||
T Consensus 346 ~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~f 425 (736)
T 3rfu_A 346 AVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVV 425 (736)
T ss_dssp HHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEE
Confidence 666655555555554332 2478899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceE
Q 005830 334 DKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTA 413 (675)
Q Consensus 334 DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~s 413 (675)
|||||||+|+|++.++. ..+.+.++++.+++..+..+. ||++.|+++++... +.......+|++..++..
T Consensus 426 DKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s~-hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g~gv 495 (736)
T 3rfu_A 426 DKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQSE-HPLANAIVHAAKEK-----GLSLGSVEAFEAPTGKGV 495 (736)
T ss_dssp CCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSSC-CHHHHHHHHHHHTT-----CCCCCCCSCCCCCTTTEE
T ss_pred eCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcCC-ChHHHHHHHHHHhc-----CCCccCcccccccCCceE
Confidence 99999999999999876 235677888888887776655 99999999876421 222223456777666543
Q ss_pred EEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCC
Q 005830 414 LTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (675)
Q Consensus 414 v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~ 493 (675)
.. ..+|+ .+.+|+++.+.+..... ..+.+..+++..+|+|++++|++. +++|+++++|+
T Consensus 496 ~~--~~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~D~ 554 (736)
T 3rfu_A 496 VG--QVDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVEDP 554 (736)
T ss_dssp EE--CSSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred EE--EECCE--EEEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEeecc
Confidence 22 23454 35679999887655432 235566788999999999999976 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+|++++++|++|+++|++++|+|||+..+|..+|+++||. .++++++|++
T Consensus 555 i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P~~ 604 (736)
T 3rfu_A 555 IKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMPED 604 (736)
T ss_dssp BCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCHHH
T ss_pred chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCHHH
Confidence 9999999999999999999999999999999999999995 3799999999
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~ 653 (675)
|.++|+.+|++|+.|+|+|||.||+|||++||+|||||+|++.++++||+++.+++++++++++++||++++|+|+|+.|
T Consensus 605 K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~ 684 (736)
T 3rfu_A 605 KSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFF 684 (736)
T ss_dssp HHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHH
Q 005830 654 AVSITIRIVVSVP 666 (675)
Q Consensus 654 ~~~~n~~~~~~~~ 666 (675)
++.||+..+..++
T Consensus 685 a~~yN~~~iplAa 697 (736)
T 3rfu_A 685 AFIYNVLGVPLAA 697 (736)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999998876665
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-84 Score=736.62 Aligned_cols=504 Identities=24% Similarity=0.364 Sum_probs=435.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEec
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g 176 (675)
+|..+.+++++++++..++...+.|+++.++++++..|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 45556777888888888888888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHH
Q 005830 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (675)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (675)
.+.||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|+++|.+|.++++.+++++++ +++++++..++++.+++..
T Consensus 175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred -cEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999998874 7889999999999987766
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecC
Q 005830 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (675)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DK 335 (675)
+++.+++.++.|+.....++..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|++|++|++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcC
Confidence 66555554444444434567778888999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEE
Q 005830 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (675)
Q Consensus 336 TGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~ 415 (675)
|||||+|+|++.++.. .+.+.++++.+++..+..+. ||++.|+++++.+.. .......+|.....+.. .
T Consensus 334 TGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~g-----~~~~~~~~~~~~~g~g~-~ 402 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGV-V 402 (645)
T ss_dssp GGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEE-E
T ss_pred cccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhhcCC-ChhHHHHHHHHHhcC-----CCcCCccceEEecCCce-E
Confidence 9999999999998764 24567788888887776655 999999988763211 11000111211111111 1
Q ss_pred EEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCC
Q 005830 416 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (675)
Q Consensus 416 ~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr 495 (675)
. ..+.+|+++.+.+... ..++.+....+++..+|+|+++++++. +++|+++++|++|
T Consensus 403 ~-------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 403 A-------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp E-------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred E-------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCch
Confidence 0 1356789888765332 123456677888999999999999875 9999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHH
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 575 (675)
|+++++|++|+++|++++|+|||+..+|..+|+++|+. .+|++++|++|.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 509 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 509 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHH
Confidence 99999999999999999999999999999999999985 379999999999
Q ss_pred HHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655 (675)
Q Consensus 576 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~ 655 (675)
++++.++++ +.|+|+|||.||+|||++||+|||||+|++.++++||+++.+++++++++++++||++++|+++|+.|++
T Consensus 510 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 588 (645)
T 3j08_A 510 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 588 (645)
T ss_dssp HHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHH
Q 005830 656 SITIRIVVSVP 666 (675)
Q Consensus 656 ~~n~~~~~~~~ 666 (675)
++|+..+..++
T Consensus 589 ~~N~~~i~la~ 599 (645)
T 3j08_A 589 IYNVILIPAAA 599 (645)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99988655543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-84 Score=744.29 Aligned_cols=506 Identities=24% Similarity=0.368 Sum_probs=437.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEec
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g 176 (675)
+|..+.+++++++++..++...+.|+++.++++++..|.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 45556777888888888888888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHH
Q 005830 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (675)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (675)
.+.||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|+++|.+|.++++.+++++++ +++++++.+++++.+++..
T Consensus 253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred -CeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999998874 7789999999999887766
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecC
Q 005830 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (675)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DK 335 (675)
+++.+++.++.|++....+|..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|.||++|++||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 66555554444444435567788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEE
Q 005830 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (675)
Q Consensus 336 TGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~ 415 (675)
|||||+|+|++.++.. .+.+.++++.+++..+..+. ||++.++++++..........+ +|.....+. +.
T Consensus 412 TGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~~~~~~~~-----~~~~~~g~g-~~ 480 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPE-----KVEVIAGEG-VV 480 (723)
T ss_dssp HHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCSCC-----CCEEETTTE-EE
T ss_pred CCccccCceEEEEEEe----CCCCHHHHHHHHHHHhccCC-CchhHHHHHHHHhcCCCcCCcc-----ceEEecCCc-eE
Confidence 9999999999998764 24567788888887776655 9999999887632110001111 121111111 11
Q ss_pred EEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCC
Q 005830 416 YIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (675)
Q Consensus 416 ~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr 495 (675)
. ..+.+|+++.+.+.... .++.+....+++..+|+|+++++++. +++|+++++|++|
T Consensus 481 ~-------~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 481 A-------DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp E-------TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred E-------EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcc
Confidence 0 23567898887653321 23456777888999999999999865 9999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHH
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 575 (675)
|+++++|++|+++|++++|+|||+..+|..+|+++|+. .++++++|++|.
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 587 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 587 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHH
Confidence 99999999999999999999999999999999999985 379999999999
Q ss_pred HHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 655 (675)
Q Consensus 576 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~ 655 (675)
++++.+|++ +.|+|+|||.||+|||++||+|||||+|++.++++||+++.+++++++++++++||++++|+++|+.|++
T Consensus 588 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 588 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHH
Q 005830 656 SITIRIVVSVPNI 668 (675)
Q Consensus 656 ~~n~~~~~~~~~~ 668 (675)
++|+..+..+++.
T Consensus 667 ~~n~~~i~~a~~~ 679 (723)
T 3j09_A 667 IYNVILIPAAAGL 679 (723)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999876555433
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=296.40 Aligned_cols=259 Identities=21% Similarity=0.309 Sum_probs=201.7
Q ss_pred HHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHH
Q 005830 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 384 (675)
Q Consensus 305 ~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~ 384 (675)
++.+++++||++|+++++|.++++++||||||||||+|+|.+.++. +.++++.+++..+..+. ||++.++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~s~-hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEALSS-HPIAKAIV 75 (263)
Confidence 5578999999999999999999999999999999999999997653 34566777766665544 99999988
Q ss_pred hhcCChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEE
Q 005830 385 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (675)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 464 (675)
.++.............+.++..+... . .++ ..+..|+++ +|.+ +.
T Consensus 76 ~~~~~~g~~~~~~~~~~~~~G~g~~~----~---~~~--~~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQGVKILEVKDFKEISGIGVRG----K---ISD--KIIEVKKAE-------------------------NNND-IA 120 (263)
Confidence 76542211000000111111000000 0 001 001112111 2333 44
Q ss_pred EEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccC
Q 005830 465 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544 (675)
Q Consensus 465 ~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 544 (675)
++++. .+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..+++++|+..
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------- 177 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------- 177 (263)
Confidence 45444 7899999999999999999999999999999999999999999999999853
Q ss_pred CccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEE
Q 005830 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (675)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~v 624 (675)
+|+.+.|++|..+++.++..+..|+|||||.||++|+++||+|++++++++.+...||++
T Consensus 178 --------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 178 --------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Confidence 477778999999999999988899999999999999999999999998888899999999
Q ss_pred ecCCChhHHHHHHHHHHHHHHHHHHH
Q 005830 625 LTEPGLSVIISAVLTSRAIFQRMKNY 650 (675)
Q Consensus 625 l~~~~~~~i~~~i~~gr~~~~~i~~~ 650 (675)
+.++++..+..++.++|+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 99999999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=253.57 Aligned_cols=279 Identities=28% Similarity=0.417 Sum_probs=209.1
Q ss_pred HHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHH
Q 005830 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIV 384 (675)
Q Consensus 305 ~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~ 384 (675)
++++++++|+++|+++++|.++++++|+||||||||.+.+.+.++.. . .+ +.++++.+++..+..+. ||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~s~-hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERRSE-HPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTTCC-SHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhcCC-CHHHHHHH
Confidence 56889999999999999999999999999999999999999887653 2 23 67788888887766554 99999987
Q ss_pred hhcCChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEE
Q 005830 385 GMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLG 464 (675)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 464 (675)
..+............+..++.. .+. . ..+.+|+++.+.+.... .++.+....+.+..+|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~G~------~~~--~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIAGE------GVV--A-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEETTT------EEE--E-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeecCC------CeE--E-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 7653111000011111111110 110 0 12345766654332211 112344556778889999999
Q ss_pred EEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccC
Q 005830 465 VARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG 544 (675)
Q Consensus 465 ~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 544 (675)
+++.. .+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+..
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------- 204 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------- 204 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce----------
Confidence 99876 8999999999999999999999999999999999999999999999999852
Q ss_pred CccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEE
Q 005830 545 QDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (675)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~v 624 (675)
.|..+.|..|...++.++.. ..|+|+||+.||++|.+.|+++++++++.+..+..||++
T Consensus 205 --------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 205 --------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp --------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred --------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 46677799999999999888 899999999999999999999999987766667789999
Q ss_pred ecCCChhHHHHHHHHHHHHHHHHH
Q 005830 625 LTEPGLSVIISAVLTSRAIFQRMK 648 (675)
Q Consensus 625 l~~~~~~~i~~~i~~gr~~~~~i~ 648 (675)
+.++++..+..++..+|+++++||
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 988899999999999999999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-29 Score=214.52 Aligned_cols=110 Identities=27% Similarity=0.460 Sum_probs=104.6
Q ss_pred HHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCccccc
Q 005830 125 AAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSG 204 (675)
Q Consensus 125 ~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aG 204 (675)
++++|+++.|..++|+|||++++|++++|+|||+|.|++||+|||||+|++| .+.||||+|||||.|+.|.+|+.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g-~~~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG-ESYVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC-CEEEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-eEEEEccccCCCCccEEECCCCEEEeC
Confidence 4567788899999999999999999999999999999999999999999999 589999999999999999999999999
Q ss_pred eeeeeceEEEEEEEecchhhhhhhhhhhhcc
Q 005830 205 STCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (675)
Q Consensus 205 t~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~ 235 (675)
|.+.+|.+.++|+++|.+|.+|++.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999988654
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-28 Score=213.46 Aligned_cols=116 Identities=27% Similarity=0.446 Sum_probs=106.0
Q ss_pred HHhHHHHHHHHHhcCCCeEEEEECCe------EEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcc
Q 005830 119 ENNAGNAAAALMANLAPKTKVLRDGR------WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLP 192 (675)
Q Consensus 119 ~~~~~~~~~~l~~~~~~~~~V~r~g~------~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~p 192 (675)
++|+++++++|+++.|..++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-SMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-CEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-EEEEeccccCCCcc
Confidence 45677888999999999999999764 789999999999999999999999999999995 58999999999999
Q ss_pred cccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc
Q 005830 193 VTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 235 (675)
Q Consensus 193 v~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~ 235 (675)
+.|.+|+.+|+||.+.+|.+.++|+++|.+|.+|++.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999988764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=236.79 Aligned_cols=276 Identities=28% Similarity=0.399 Sum_probs=203.4
Q ss_pred cccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhc
Q 005830 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (675)
Q Consensus 316 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (675)
+|+++++|.+++++.|+||++||||.|++.+..+.. . .+ +.++++.++........ ++...++.+.+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~-~~-~~~~~~~~~~~~~~~s~-~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--F-NH-SEDELLQIAASLEARSE-HPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--S-SS-CHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--c-CC-CHHHHHHHHHHhhccCC-CHHHHHHHHHHHhcCCCCC
Confidence 588999999999999999999999999999988763 2 22 67777777776665544 7888877665431110001
Q ss_pred CCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC
Q 005830 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (675)
Q Consensus 396 ~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~ 475 (675)
....+..++..+ .... .++. .+..|.++.+........ .....+...+.+.+.+++..
T Consensus 76 ~~~~~~~~~g~~----~~~~---~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPGKG----VEGI---VNGR--RYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETTTE----EEEE---ETTE--EEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCCCE----EEEE---ECCE--EEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 112222222111 1111 1332 234577777655433211 23445667888998888866
Q ss_pred CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCccc
Q 005830 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALP 555 (675)
Q Consensus 476 ~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 555 (675)
.++|.+.+.++++|++.++++.|++.|+++.++||++...+..+.+.+|+..
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------- 185 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--------------------- 185 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh---------------------
Confidence 8999999999999999999999999999999999999999999999999853
Q ss_pred HHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHH
Q 005830 556 VDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 556 ~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
.|..+.|.+|...++.+.+.. .++|+||+.||++|++.|++|++|+++++..+..||+++..++++++.+
T Consensus 186 ---------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 186 ---------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp ---------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred ---------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 477888999999999998776 5799999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 005830 636 AVLTSRAIFQRMKNYTIYAVS 656 (675)
Q Consensus 636 ~i~~gr~~~~~i~~~i~~~~~ 656 (675)
+++++|++++++++|+.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999864
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.7e-23 Score=211.07 Aligned_cols=145 Identities=12% Similarity=0.026 Sum_probs=113.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHh--hhcCEEE
Q 005830 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELI--EKADGFA 567 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~ 567 (675)
..+++||+++++++.|+++|++++|+|||...++.++++++|+...... +...... .++..+.... ....+++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~---i~~n~l~--~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK---VVSNFMD--FDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEE---EEEECEE--ECTTSBEEEECSSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccce---EEeeeEE--EcccceeEeccccccchhh
Confidence 3579999999999999999999999999999999999999998643110 0000000 0000000000 0123467
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHH---hCCccEEcC-------CccHHHHhccCEEecCCChhHHHHHH
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK---KADIGIAVA-------DATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~---~A~vgia~~-------~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
+..|.+|...+..+++.++.|+|+|||.||+||++ .||+||+|| ++++.+++++|+||++|++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 77899999999999999999999999999999954 899999998 78889999999999999999999887
Q ss_pred HH
Q 005830 638 LT 639 (675)
Q Consensus 638 ~~ 639 (675)
..
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-18 Score=158.66 Aligned_cols=139 Identities=21% Similarity=0.366 Sum_probs=116.7
Q ss_pred ccCCCcHHHHHHHHHHc--cccCcChHHHHHHhhcCCh--HHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCc
Q 005830 355 AKGVEKEHVILLAARAS--RTENQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGA 430 (675)
Q Consensus 355 ~~~~~~~~~l~~~~~~~--~~~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa 430 (675)
..+.+.++++.+++.++ ....++|++.|++.++... ...+..++.+..+||+|.+|||+++++..+|++++++|||
T Consensus 10 ~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGA 89 (170)
T 3gwi_A 10 ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGA 89 (170)
T ss_dssp TTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCC
Confidence 35778899999998887 4445699999999987542 2235678999999999999999999988778889999999
Q ss_pred HHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcC---CCCCCCCcEEEEEecccCC
Q 005830 431 PEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT---KESPGAPWQLVGLLPLFDP 493 (675)
Q Consensus 431 ~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~---~~~~e~~l~~lG~i~~~d~ 493 (675)
||.|+++|+. ++..++.+.+.++.|+++|+|||++|++.++..+ ....|++|+|+|+++|-|.
T Consensus 90 pE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 90 LQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred cHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 9999999973 4567788999999999999999999999987653 2346999999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.48 E-value=3.3e-14 Score=135.95 Aligned_cols=127 Identities=20% Similarity=0.341 Sum_probs=105.9
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHH
Q 005830 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (675)
Q Consensus 501 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~ 580 (675)
+|+.|+++|+++.++||++...+..+++.+|+.. +|... ..|...++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 9999999999999999999999999999999853 13222 455566655
Q ss_pred HHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCC----hhHHHHHHHHHHHHHHHHHHHHH
Q 005830 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTI 652 (675)
Q Consensus 581 l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gr~~~~~i~~~i~ 652 (675)
+.+. ...++|+||+.||++|++.|+++++++++.+.+++.||+++.+++ +..+.+.+..+|..++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 5443 567999999999999999999999999999999999999998764 67788888899999999999999
Q ss_pred HHHHHhH
Q 005830 653 YAVSITI 659 (675)
Q Consensus 653 ~~~~~n~ 659 (675)
|.+.+|-
T Consensus 182 ~~~~~~~ 188 (189)
T 3mn1_A 182 EGHHHHH 188 (189)
T ss_dssp TTC----
T ss_pred ccccccC
Confidence 9998873
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.37 E-value=6.4e-13 Score=139.06 Aligned_cols=156 Identities=13% Similarity=0.121 Sum_probs=111.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+++|++.+.++.|+++|+++.++||+....+..+++.+|+.......-.+...... +. ........+..|+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~t----g~-----~~~~~~~~kpk~~ 248 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLT----GQ-----VLGEVVSAQTKAD 248 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE----EE-----EESCCCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeee----ee-----ecccccChhhhHH
Confidence 68999999999999999999999999999999999999985311000000000000 00 0000001122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~ 652 (675)
....+++.+.-....|+|+|||.||++|++.|++|++| ++.+..++.||.++..+++.+++.++.......+++++|+.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 44555555555567899999999999999999999999 88899999999999999999999999988888889999999
Q ss_pred HHHHHh
Q 005830 653 YAVSIT 658 (675)
Q Consensus 653 ~~~~~n 658 (675)
|++.||
T Consensus 328 ~~~~~~ 333 (335)
T 3n28_A 328 EGHHHH 333 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 998887
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=6.5e-12 Score=118.87 Aligned_cols=132 Identities=20% Similarity=0.220 Sum_probs=105.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
.+...++|+.|+++|++++++||++...+..+++.+|+... |... ..|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~------------------------------~~~~--k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF------------------------------FLGK--LEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE------------------------------EESC--SCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecCC--CCc
Confidence 35677999999999999999999999999999999998531 2222 334
Q ss_pred HHHHHHHHh----CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHH----HHHHHHHHHHHH
Q 005830 575 YEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII----SAVLTSRAIFQR 646 (675)
Q Consensus 575 ~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~----~~i~~gr~~~~~ 646 (675)
...++.+.+ ....|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++..+++ +.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 554444432 236799999999999999999999999988899999999999887666555 444557777999
Q ss_pred HHHHHHHHHHHh
Q 005830 647 MKNYTIYAVSIT 658 (675)
Q Consensus 647 i~~~i~~~~~~n 658 (675)
++.++.|+.+.|
T Consensus 165 ~~~~~~~~~~~~ 176 (180)
T 1k1e_A 165 FDTAQGFLKSVK 176 (180)
T ss_dssp HHCHHHHHHHGG
T ss_pred hhhccchhhhhc
Confidence 999999988765
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.8e-11 Score=115.58 Aligned_cols=123 Identities=18% Similarity=0.237 Sum_probs=101.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--cCHHHHHHHH
Q 005830 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--VFPEHKYEIV 578 (675)
Q Consensus 501 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~p~~K~~iv 578 (675)
+|+.|+++|+++.++||++...+..+++.+|+.. +|.. ..|+-...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 4999999999999999999999999999999863 1222 2466666777
Q ss_pred HHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCC----hhHHHHHHHHHHHHHHHHHHHHHH
Q 005830 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTIY 653 (675)
Q Consensus 579 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gr~~~~~i~~~i~~ 653 (675)
+.+.-....++|+||+.||++|++.|+++++++++.+.++..||+++.+++ +..+.+.+...|..++++.+++.+
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 777666778999999999999999999999999999999999999998877 445556666677788877776654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.1e-11 Score=113.41 Aligned_cols=136 Identities=18% Similarity=0.136 Sum_probs=98.0
Q ss_pred cCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HhCCCCC
Q 005830 458 RGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR--RLGMGTN 535 (675)
Q Consensus 458 ~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~--~~gi~~~ 535 (675)
++.+.+++-....-....-.+..+-..++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+. .
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~ 77 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T 77 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E
Confidence 466767666554321111111222245677777776 3899999999999999999 67777888 55652 1
Q ss_pred CCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcC
Q 005830 536 MYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVA 611 (675)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~ 611 (675)
|. .+++|...++.+.+. ...|+|+||+.||.+|++.|+++++|+
T Consensus 78 ------------------------------~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~ 125 (168)
T 3ewi_A 78 ------------------------------EV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA 125 (168)
T ss_dssp ------------------------------EC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT
T ss_pred ------------------------------EE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC
Confidence 21 124577766666543 457999999999999999999999999
Q ss_pred CccHHHHhccCEEecCCChhHHH
Q 005830 612 DATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 612 ~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
++.+.+++.||+++.+++-++++
T Consensus 126 na~~~~k~~Ad~v~~~~~~~G~~ 148 (168)
T 3ewi_A 126 DACSGAQKAVGYICKCSGGRGAI 148 (168)
T ss_dssp TCCHHHHTTCSEECSSCTTTTHH
T ss_pred ChhHHHHHhCCEEeCCCCCccHH
Confidence 99999999999999887766643
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3.4e-11 Score=118.46 Aligned_cols=148 Identities=22% Similarity=0.126 Sum_probs=105.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCc----cCCcc-ccc--------------
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSL----LGQDK-DAS-------------- 550 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~----~~~~~-~~~-------------- 550 (675)
..++.+.+.++|++|++.|++++++||++...+..+++.+|+..... .+... .+... ...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999864111 11000 01100 000
Q ss_pred ----------------------cCcccHHHHhhh--cCE-----EEecCH--HHHHHHHHHHHhC----CCEEEEECCCc
Q 005830 551 ----------------------IAALPVDELIEK--ADG-----FAGVFP--EHKYEIVKRLQER----KHICGMTGDGV 595 (675)
Q Consensus 551 ----------------------~~~~~~~~~~~~--~~v-----~~r~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ 595 (675)
.+.+.++++.+. ..+ +..+.| .+|...++.+.+. ...|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 001111222111 111 123335 5888888887653 35799999999
Q ss_pred cCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 596 ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999998875
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-11 Score=117.91 Aligned_cols=102 Identities=21% Similarity=0.311 Sum_probs=83.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (675)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 45999999999999999999999999999999853 23333 23444444
Q ss_pred HH----HhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHH
Q 005830 580 RL----QERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 580 ~l----~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i 633 (675)
.+ .-....|+|+||+.||.+|++.|+++++++++.+.+++.||+++.+++-.++
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~ 164 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGA 164 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTH
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCH
Confidence 44 3345679999999999999999999999999999999999999988765553
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.15 E-value=7.8e-11 Score=110.96 Aligned_cols=104 Identities=25% Similarity=0.318 Sum_probs=85.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHH
Q 005830 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (675)
Q Consensus 501 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~ 580 (675)
+++.|+++|+++.++||++...+..+++.+|+. ++... ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 899999999999999999999999999999984 13332 345555555
Q ss_pred HHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHH
Q 005830 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 581 l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
+.+. ...++|+||+.||++|++.|+++++++++.+..++.||+++.+++..+++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 4443 46799999999999999999999999999999999999999888866555433
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.13 E-value=1e-10 Score=113.24 Aligned_cols=100 Identities=22% Similarity=0.292 Sum_probs=84.2
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHH
Q 005830 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (675)
Q Consensus 501 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~ 580 (675)
+++.|+++|+++.++||++...+..+++.+|+.. +|... ..|...++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 8999999999999999999999999999999853 23333 446666655
Q ss_pred HHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhH
Q 005830 581 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 581 l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~ 632 (675)
+.++ ...|+|+||+.||++|+++|+++++++++.+.++..||+++.+++-.+
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 5443 678999999999999999999999999888999999999998775443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=4.1e-10 Score=102.52 Aligned_cols=140 Identities=19% Similarity=0.267 Sum_probs=93.5
Q ss_pred CCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCCh-HHHhcCCc--EEEEecCCccCcc
Q 005830 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADP-KEARAGVR--EVHFLPFNPVDKR 411 (675)
Q Consensus 335 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~-~~~~~~~~--~~~~~~f~~~~k~ 411 (675)
..||+|-|++++..+.. ..+.+.++++.+++.++..+. ||++.|++.++... ........ .....+|++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~Se-HPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSSCC-SHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCcCC-CHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999998753 346788999999998886655 99999999876422 10000000 1234688887775
Q ss_pred eEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecc
Q 005830 412 TALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL 490 (675)
Q Consensus 412 ~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~ 490 (675)
..+.+ +| ..+.+|+++.|.+++... ...+..+.+.++.++++|.+++++|... +++|++++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66633 56 467899987766655311 1122346777889999999999999876 89999999
Q ss_pred cCCCCc
Q 005830 491 FDPPRH 496 (675)
Q Consensus 491 ~d~lr~ 496 (675)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=4.2e-10 Score=104.45 Aligned_cols=107 Identities=28% Similarity=0.289 Sum_probs=85.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC--HHHHHHHH
Q 005830 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF--PEHKYEIV 578 (675)
Q Consensus 501 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~--p~~K~~iv 578 (675)
+++.|++.|+++.++||++...+..+++.+|+... |.... |+--..+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~kpk~~~~~~~~ 88 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGVVDKLSAAEELC 88 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSCSCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------ecccCChHHHHHHHH
Confidence 89999999999999999999999999999998532 22222 23334444
Q ss_pred HHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhH-HHHHH
Q 005830 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 637 (675)
Q Consensus 579 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~-i~~~i 637 (675)
+.+.-....++|+||+.||.+|++.|+++++++++.+..++.||+++.+++..+ +.+++
T Consensus 89 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 89 NELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp HHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 444444568999999999999999999999999999999999999999888555 44444
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-09 Score=116.78 Aligned_cols=136 Identities=20% Similarity=0.220 Sum_probs=105.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe----
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---- 568 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r---- 568 (675)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.......-.+.. ..+..+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d------------------g~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVD------------------GTLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEET------------------TEEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeC------------------CEEEeeEccC
Confidence 6789999999999999999999999999999999999998532100000000 001111
Q ss_pred -cCHHHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHH
Q 005830 569 -VFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 643 (675)
Q Consensus 569 -~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~ 643 (675)
..++.|..+++.+.++ ...++|+||+.||.+|++.|++|+++ ++.+..++.||+++..+++.+++.++.++|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1256676666655443 35799999999999999999999999 67888899999999999999999999888876
Q ss_pred HHHH
Q 005830 644 FQRM 647 (675)
Q Consensus 644 ~~~i 647 (675)
++..
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.93 E-value=3e-09 Score=107.79 Aligned_cols=67 Identities=24% Similarity=0.302 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+.++++||+|+.+++-+++.++|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 676666666543 4569999999999999999999999999999999999999999999999988863
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.9e-09 Score=104.41 Aligned_cols=133 Identities=20% Similarity=0.190 Sum_probs=94.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~ 570 (675)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+................ ..+... ..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~--------------~~~~~~~~~ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALN--------------GLVTGHMMF 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE--------------EEEEESCCS
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEE--------------eeeccCCCC
Confidence 457899999999999999999999999999999999999985321000000000000 000000 12
Q ss_pred HHHHHHHHHHHHh----CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHH
Q 005830 571 PEHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 571 p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
+..|...++.+.+ ....++++||+.||++|++.|++++++ ++.+..++.||+++.++++..+..++.+
T Consensus 140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 3445555544433 346799999999999999999999999 7788889999999999999998877654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.90 E-value=5.9e-09 Score=106.25 Aligned_cols=68 Identities=15% Similarity=0.142 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHH
Q 005830 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 572 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+.+++.||+++.+++-+++.++|+.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4577777666543 3469999999999999999999999999999999999999999999999988863
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2.3e-08 Score=99.97 Aligned_cols=66 Identities=24% Similarity=0.274 Sum_probs=56.8
Q ss_pred HHHHHHHHHHh----CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|..-++.+.+ ....|+++||+.||.+|++.|++|++|+++.+.+++.||+|+.+++-+++.++|+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 45555555544 3457999999999999999999999999999999999999999999999998885
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.83 E-value=3e-09 Score=110.91 Aligned_cols=152 Identities=14% Similarity=0.148 Sum_probs=100.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCcc--------------ccccCc---cc
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK--------------DASIAA---LP 555 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~--------------~~~~~~---~~ 555 (675)
++++++.+.++.|++ |+.+.++||+....+....+.+++....... ....... ...... +.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGT-EVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEE-BCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhccc-ccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 468999999999999 9999999999977677777777763211000 0000000 000000 01
Q ss_pred HHHHhhh----c--CEEE----ecCHHHHHHHHHHHHhCC--CEEEEECCCccCHHHHHhC----CccEEcCCccHHHHh
Q 005830 556 VDELIEK----A--DGFA----GVFPEHKYEIVKRLQERK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARS 619 (675)
Q Consensus 556 ~~~~~~~----~--~v~~----r~~p~~K~~iv~~l~~~~--~~v~~iGDg~ND~~al~~A----~vgia~~~~~~~a~~ 619 (675)
+ +.+.+ . ..+. -..+.+|...++.+.... +.|+++|||.||++|++.| ++||+| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 00000 0 0011 123567988888776542 4599999999999999999 999999 99999999
Q ss_pred ccCEEecCCChhHHHHHH----HHHHHHHHHHHH
Q 005830 620 ASDIVLTEPGLSVIISAV----LTSRAIFQRMKN 649 (675)
Q Consensus 620 ~ad~vl~~~~~~~i~~~i----~~gr~~~~~i~~ 649 (675)
.||+++.+++.+++..+| ..+|..+ ++-+
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 999999999998887765 4466666 4444
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.9e-08 Score=102.39 Aligned_cols=67 Identities=21% Similarity=0.202 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCE--EecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~--vl~~~~~~~i~~~i~ 638 (675)
..|...++.+.+. ...|+++||+.||.+|++.|++||||+|+.+.+|++||+ ++.+++-+++.++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 3587777777553 346999999999999999999999999999999999984 777888999998875
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=9.8e-09 Score=105.92 Aligned_cols=131 Identities=15% Similarity=0.133 Sum_probs=94.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE-ecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-GVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-r~~p 571 (675)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+.......-...+..... .+.. -..+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg--------------~i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD--------------NITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE--------------EECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee--------------eEecccCCC
Confidence 378999999999999999999999999999999999999853211000000000000 0000 0124
Q ss_pred HHHHHHHHHHHh----CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+.|..+++.+.+ ....++|+||+.||++|++.|++|+++ ++.+..+..||.++..+++..+..+++
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 555555544433 346799999999999999999999999 567788889999999899998877653
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=4.1e-09 Score=106.83 Aligned_cols=66 Identities=23% Similarity=0.262 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+.+++.||+|+.+++-+++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 477777666543 356999999999999999999999999999999999999999888999988874
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.2e-08 Score=103.84 Aligned_cols=66 Identities=23% Similarity=0.241 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+. ...|+++||+.||.+|++.|++||||+|+.+.+++.||+|+.+++-+++.++|+
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 588777776653 346999999999999999999999999999999999999999999999998885
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=8.2e-09 Score=104.13 Aligned_cols=67 Identities=24% Similarity=0.276 Sum_probs=58.1
Q ss_pred HHHHHHHHHHh----CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHH
Q 005830 573 HKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 573 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
.|...++.+.+ ....++++||+.||.+|++.|++|++|+++.+.+++.||+++.+++-+++.++|+.
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 47666655544 34679999999999999999999999999999999999999999999999988853
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.79 E-value=2e-08 Score=92.85 Aligned_cols=110 Identities=20% Similarity=0.244 Sum_probs=87.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--cCHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--VFPE 572 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~p~ 572 (675)
.+++.++++.|++.|++++++||.+...+..+.+.+|+... |.. ..|+
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------------------------------~~~~kp~~~ 87 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI------------------------------YTGSYKKLE 87 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE------------------------------EECC--CHH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh------------------------------ccCCCCCHH
Confidence 46788999999999999999999999999999999998521 222 1233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
--..+++.+.-....++|+||+.||.+|.+.|++++++.++.+..+..||+++.+.+-.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 88 IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 33334444444456799999999999999999999999888888888999999888777766
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1e-08 Score=98.62 Aligned_cols=128 Identities=23% Similarity=0.315 Sum_probs=88.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~p 571 (675)
++.+++.++++.+++.|+++.++||+....+....+.+|+..... ........ ... ..+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~----------~~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA-NRLIVKDG---KLT----------GDVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE-EEEEEETT---EEE----------EEEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEE-eeeEEECC---EEc----------CCcccCccCC
Confidence 467899999999999999999999999888888888888742100 00000000 000 000000 123
Q ss_pred HHHHHHHHHHHh----CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHH
Q 005830 572 EHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 572 ~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
..|...+..+.+ ....|+++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 466655554433 2356999999999999999999999998 56777888999998777876654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.9e-08 Score=95.60 Aligned_cols=108 Identities=23% Similarity=0.282 Sum_probs=83.1
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC--HHHHHHHH
Q 005830 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF--PEHKYEIV 578 (675)
Q Consensus 501 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~--p~~K~~iv 578 (675)
+++.|+++|++++++||++...+..+.+.+|+... |.... |+--..+.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~------------------------------~~~~kpk~~~~~~~~ 110 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL------------------------------YQGQSNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE------------------------------ECSCSCSHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee------------------------------ecCCCCCHHHHHHHH
Confidence 89999999999999999999999999999998531 22211 22222233
Q ss_pred HHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHH-HHHH
Q 005830 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAVL 638 (675)
Q Consensus 579 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~-~~i~ 638 (675)
+.+.-....++|+||+.||++|++.|+++++++++.+..+..||+++.+.+..+++ ++++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 33332346799999999999999999999999887777888999999887666666 5554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=1.2e-08 Score=102.67 Aligned_cols=66 Identities=29% Similarity=0.327 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+.++++||+++.+++-+++.++|+
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 576766666543 346999999999999999999999999999999999999999999999998885
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.76 E-value=3e-09 Score=101.50 Aligned_cols=119 Identities=21% Similarity=0.264 Sum_probs=89.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+... ... ...... ...-....|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~-~~~~~~----------------~~~~~~~~~~ 139 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANR-AIFEDG----------------KFQGIRLRFR 139 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEE-EEEETT----------------EEEEEECCSS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eee-EEeeCC----------------ceECCcCCcc
Confidence 6899999999999999999999999988777777 77776321 000 000000 0001345567
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+ ....++++||+.||++|++.|+++++|+++.+ .||+++ +++..+.+.++
T Consensus 140 ~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 140 DKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp CHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHHH
T ss_pred CHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHHH
Confidence 899988888 56679999999999999999999999997765 899998 46777776664
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.74 E-value=2.4e-08 Score=98.23 Aligned_cols=147 Identities=22% Similarity=0.234 Sum_probs=101.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-CCC--cc-CCc------------------cc-
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SSS--LL-GQD------------------KD- 548 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~~--~~-~~~------------------~~- 548 (675)
..+.+.+.+++++++++|++++++||++...+..+.+.+|+...... +.. .. +.. ..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 35678899999999999999999999999999999999997531110 000 00 000 00
Q ss_pred -c------------------ccCcccHHHHhhh----cCEE-----EecCH--HHHHHHHHHHHhC----CCEEEEECCC
Q 005830 549 -A------------------SIAALPVDELIEK----ADGF-----AGVFP--EHKYEIVKRLQER----KHICGMTGDG 594 (675)
Q Consensus 549 -~------------------~~~~~~~~~~~~~----~~v~-----~r~~p--~~K~~iv~~l~~~----~~~v~~iGDg 594 (675)
. ....+.++.+++. ..+. ....| ..|...++.+.++ ...|+++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 0011122222222 1122 12223 3577777666542 3569999999
Q ss_pred ccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 595 ~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.||.+|++.|+++++|+++.+..++.||+++.+++-+++.++++
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 99999999999999999888888889999998888888888875
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.66 E-value=4e-08 Score=100.91 Aligned_cols=67 Identities=25% Similarity=0.239 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+.+++.||+|+.+++-+++.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4687777776553 346999999999999999999999999999999999999999989999998886
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.7e-08 Score=96.94 Aligned_cols=128 Identities=14% Similarity=0.145 Sum_probs=94.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+....... .+.+.+. ...+-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-~i~~~~~-----------------~~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEA-DVLGRDE-----------------APPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGG-GEECTTT-----------------SCCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcc-eEEeCCC-----------------CCCCCCHH
Confidence 35689999999999999999999999999999999999985321000 0000000 01122233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
--..+++.+.-....++++||+.||+.|.+.|++ +|+|+++.+..+..||+++ +++..+...+...
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 3445555555455679999999999999999999 9999877777778899998 6788888887653
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-07 Score=91.18 Aligned_cols=129 Identities=12% Similarity=0.060 Sum_probs=89.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-CCCCCCcc-CCccccccCcccHHHHhhhcCEEEecCH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSSSLL-GQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
+.|++.+.++.|++.|+++.++|+.....+....+.+|+... ........ ...... .......+|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~ 149 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK-------------ELDNSNGAC 149 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE-------------EEECTTSTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee-------------ccCCCCCCc
Confidence 789999999999999999999999999999999999998521 00000000 000000 000122345
Q ss_pred HHHHHHHHHH-HhCCCEEEEECCCccCHHHHHh----CCccEEcCCccHHHHhccCEEecCCChhHHHHHH
Q 005830 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKK----ADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 572 ~~K~~iv~~l-~~~~~~v~~iGDg~ND~~al~~----A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
..|...+... .-....++|+||+.||.+|+++ +.++++++++.+..+..||+++ +++..+.+++
T Consensus 150 ~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 150 DSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp TCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred ccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 5666666554 5567889999999999999976 3444455567778888999998 5677776654
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.60 E-value=7.6e-08 Score=94.43 Aligned_cols=127 Identities=19% Similarity=0.231 Sum_probs=93.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...... .+.+... -...-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--IAGDDSV-----------------ERGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE--EECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee--EEeCCCC-----------------CCCCCCHH
Confidence 4678999999999999999999999999999999999997532100 0000000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc---cEEcCCcc-HHHHh-ccCEEecCCChhHHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADAT-DAARS-ASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gia~~~~~-~~a~~-~ad~vl~~~~~~~i~~~i~~g 640 (675)
--..+++.+.-....|+++||+.||+.|++.|++ +|+++++. +..+. .||+++ +++..+.++++.+
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 5556667776666789999999999999999999 88888433 44454 799998 6799998888754
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.60 E-value=2.7e-07 Score=88.53 Aligned_cols=127 Identities=15% Similarity=0.115 Sum_probs=93.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE--ecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~~ 570 (675)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...... ....+.. ..... .-.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~-~~~~~~~----------------~~~~~~~~p~ 130 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH-KLEIDDS----------------DRVVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE-EEEECTT----------------SCEEEEECCS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc-eeEEcCC----------------ceEEeeecCC
Confidence 5789999999999999 99999999999999999999998632100 0000000 00001 256
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
|+.|...++.+...+..++|+||+.||++|.+.|++++++....+....+++++. -+++..+.+++.
T Consensus 131 p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 8899999999988888999999999999999999999998544343334455542 267888887663
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.56 E-value=2.2e-07 Score=94.19 Aligned_cols=66 Identities=23% Similarity=0.213 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+..++.||+++.+++.+++.++|+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 687777777553 346999999999999999999999999998999999999998888889988875
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.46 E-value=2.7e-07 Score=89.58 Aligned_cols=127 Identities=9% Similarity=0.089 Sum_probs=91.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...... .+..... -...-.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--IVGSSLD-----------------GKLSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE--EEEECTT-----------------SSSCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee--eeccCCC-----------------CCCCCCH
Confidence 35789999999999999999999999999989999999997532100 0000000 0001123
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc---cEEcCCccHHH--HhccCEEecCCChhHHHHHHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDAA--RSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gia~~~~~~~a--~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
+--..+.+.+.-....|+++||+.||+.|.+.|++ ++++|++.... +..||+++ +++..+.+++..
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 33445556665555689999999999999999999 88877544333 57899999 578888887764
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.40 E-value=7.1e-07 Score=89.23 Aligned_cols=127 Identities=13% Similarity=0.127 Sum_probs=87.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
.+.+++.+.++.|++.|+++.++|++.......+.+.+|+..... ......... -.....|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~-----------------~~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDV-----------------PAGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGS-----------------SCCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-HheecCCcc-----------------CCCCCCHH
Confidence 467899999999999999999999999888888888877643210 111100000 01112345
Q ss_pred HHHHHHHHHHhCC-CEEEEECCCccCHHHHHhCC---ccEEcCCc------------------------cHHHHhc-cCE
Q 005830 573 HKYEIVKRLQERK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-SDI 623 (675)
Q Consensus 573 ~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~---vgia~~~~------------------------~~~a~~~-ad~ 623 (675)
--..+++.+.-.. ..|+++||+.||+.|++.|+ ++++++++ .+..+.. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 5566667776555 68999999999999999999 56666654 2333344 999
Q ss_pred EecCCChhHHHHHHHH
Q 005830 624 VLTEPGLSVIISAVLT 639 (675)
Q Consensus 624 vl~~~~~~~i~~~i~~ 639 (675)
++ +++..+..++..
T Consensus 245 v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 245 TI--ETMQELESVMEH 258 (267)
T ss_dssp EE--SSGGGHHHHHHH
T ss_pred ec--cCHHHHHHHHHH
Confidence 98 568888777643
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=6.7e-07 Score=89.37 Aligned_cols=64 Identities=23% Similarity=0.291 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhC-C-----CEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER-K-----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~-~-----~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.+|...++.+.+. | ..++++||+.||.+|++.|++|++|+|+.+ . .++++..+++-+++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888777664 3 679999999999999999999999998888 4 7889998888888888775
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.38 E-value=5.1e-07 Score=87.92 Aligned_cols=126 Identities=12% Similarity=0.090 Sum_probs=88.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+...... .+.+... -.....|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN--IVTRDDV-----------------SYGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC--EECGGGS-----------------SCCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe--eeccccC-----------------CCCCCChH
Confidence 4578999999999999999999999999989999999888642110 0000000 01112233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc---cEEcC-CccHHHHhc-cCEEecCCChhHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARSA-SDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gia~~-~~~~~a~~~-ad~vl~~~~~~~i~~~i~~ 639 (675)
--..+.+.+.-....++++||+.||+.|.+.|++ +|+++ +..+..+.. ||+++ +++..+...++.
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 221 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence 3344555554445679999999999999999999 66666 445555554 99998 679888887754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.36 E-value=5.1e-07 Score=87.36 Aligned_cols=122 Identities=15% Similarity=0.163 Sum_probs=85.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.+++.|++++++|+..........+.+|+..... ..+..... -..+..|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~-----------------~~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--ALASAEKL-----------------PYSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEECTTS-----------------SCCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc--EEEecccc-----------------CCCCCChH
Confidence 456899999999999999999999999888888888888743110 00000000 00111244
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc----CCccHHHHhccCEEecCCChhHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~----~~~~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
--..+.+.+.-....++++||+.||++|++.|++++++ +++.+..+..||+++. ++..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEEC--CHHHHhH
Confidence 44556666665567899999999999999999999998 4445556778999984 4555443
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.35 E-value=5.2e-07 Score=87.85 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=85.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CCCCCCCccCCccccccCcccHHHHhhhcCEEEec--
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV-- 569 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~-- 569 (675)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+.. .......... ....+.+.-
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~----------------~~~~~~~~~~~ 149 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY----------------FNGEYAGFDET 149 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC----------------TTSCEEEECTT
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEc----------------CCCcEecCCCC
Confidence 578999999999999999999999999999999999999853 1100000000 000011111
Q ss_pred ----CHHHHHHHHHHHHhC-C-CEEEEECCCccCHHHHHhCCccEEcCCc--cHHHHhccCEEecCCChhHHHHHH
Q 005830 570 ----FPEHKYEIVKRLQER-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 570 ----~p~~K~~iv~~l~~~-~-~~v~~iGDg~ND~~al~~A~vgia~~~~--~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
.+..|..+++.+.++ | ..++|+||+.||+.|.++|+++|+++.. .+.....+|+++ +++..+...+
T Consensus 150 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred CcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 123565565554432 3 5799999999999999999998888632 344455789998 4576665443
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.34 E-value=4.1e-07 Score=87.87 Aligned_cols=120 Identities=5% Similarity=-0.051 Sum_probs=81.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|+++.++|++ ..+....+.+|+...... .+.+... -...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDA--IADPAEV-----------------AASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSE--ECCTTTS-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcce--EeccccC-----------------CCCCCChH
Confidence 45789999999999999999999998 345566677776432100 0000000 01111233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
--..+.+.+.-....|+++||+.||+.|++.|+++++|.++.+..+ .||+++.+.+--++.
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~ 210 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLE 210 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHH
Confidence 3445555555556679999999999999999999999988777777 899998654333333
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.33 E-value=1e-06 Score=85.90 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=74.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+.|++.+.++.|++.|+++.++|+... +..+.+.+|+...... +...+ .. -...-.|+-
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---i~~~~--------~~--------~~~Kp~~~~ 151 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---IVDPT--------TL--------AKGKPDPDI 151 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE---ECCC-------------------------CCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE---EeeHh--------hC--------CCCCCChHH
Confidence 679999999999999999999998754 6777888887532110 00000 00 011122333
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCC
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 628 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~ 628 (675)
-..+++.+.-....++|+||+.||+.|.+.|++++++.++.+..+ .||+++.+.
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQT 205 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSG
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCCh
Confidence 355666666666789999999999999999999999987666666 899998553
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.33 E-value=2e-06 Score=86.85 Aligned_cols=66 Identities=18% Similarity=0.103 Sum_probs=33.1
Q ss_pred HHHHHHHHHHh-----CCCE--EEEECCCccCHHHHHhCCccEEcCCcc---HHHHhc--cC-EEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE-----RKHI--CGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--SD-IVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~-----~~~~--v~~iGDg~ND~~al~~A~vgia~~~~~---~~a~~~--ad-~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+ .... ++++||+.||.+|++.|++||+|+++. +..++. || +++.+++-+++.++|+
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 46555554433 2335 999999999999999999999999886 555543 78 8888888889888775
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.31 E-value=6.9e-07 Score=87.17 Aligned_cols=126 Identities=9% Similarity=-0.003 Sum_probs=93.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...... .+.... .-...-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~-----------------~~~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--VLSVDA-----------------VRLYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE--EEEGGG-----------------TTCCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE--EEEecc-----------------cCCCCcCHH
Confidence 4578999999999999999999999999888888888887532110 000000 001122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc----CCccHHHHhccCEEecCCChhHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~----~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
--..+.+.+.-....++++||+.||+.|.+.|++++++ +++.+..+..+|+++ +++..+.+++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 45556666665667899999999999999999999999 455555566799999 679998888764
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.30 E-value=2.6e-06 Score=83.11 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=75.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEE-EecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF-AGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~r~~p 571 (675)
.+.|++.+.++.|++.|+++.++||.....+..+++.+|+............+... .... ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------------g~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYT--------------GRIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEE--------------EEEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEe--------------eeecCCCCcc
Confidence 47899999999999999999999999999999999999985211000000000000 0000 01224
Q ss_pred HHHHHHHHHHH-hCC------CEEEEECCCccCHHHHHhCCccEEcCCccH
Q 005830 572 EHKYEIVKRLQ-ERK------HICGMTGDGVNDAPALKKADIGIAVADATD 615 (675)
Q Consensus 572 ~~K~~iv~~l~-~~~------~~v~~iGDg~ND~~al~~A~vgia~~~~~~ 615 (675)
..|...++.+. +.| ..++++||+.||.+|++.|++++++.....
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~ 208 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPG 208 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHH
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHH
Confidence 66776665543 334 579999999999999999999999864433
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.28 E-value=8.5e-07 Score=86.22 Aligned_cols=125 Identities=11% Similarity=0.055 Sum_probs=90.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
-++.|++.+.++.|++.|+++.++|+..........+.+|+...... .+.... .-...-.|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~-----------------~~~~kp~~ 155 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--LISVDE-----------------VRLFKPHQ 155 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE--EEEGGG-----------------TTCCTTCH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce--eEehhh-----------------cccCCCCh
Confidence 35678999999999999999999999999888888889987532100 000000 00112234
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc----CCccHHHHhccCEEecCCChhHHHHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~----~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
+--..+.+.+.-....++++||+.||+.|.+.|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 444566666665667899999999999999999999998 344445556899998 5688877655
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.27 E-value=9.4e-07 Score=86.81 Aligned_cols=124 Identities=14% Similarity=0.051 Sum_probs=86.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...... .+..... -...-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~kp~~~ 170 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKY--IAGSNLD-----------------GTRVNKNE 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE--EEEECTT-----------------SCCCCHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEE--EEecccc-----------------CCCCCCHH
Confidence 4679999999999999999999999999999999999998532100 0000000 00111233
Q ss_pred HHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCc---cEEcCCccHH--HHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~v---gia~~~~~~~--a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+.+.+.-. ...++++||+.||+.|.+.|++ +++++++... .+..||+++ +++..+.++|
T Consensus 171 ~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l 239 (240)
T 3sd7_A 171 VIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIV--ENVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEE--SSSTTHHHHH
T ss_pred HHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEE--CCHHHHHHHh
Confidence 334556666656 6789999999999999999999 6666654433 357899998 4577776654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.27 E-value=6.7e-07 Score=90.93 Aligned_cols=131 Identities=17% Similarity=0.168 Sum_probs=88.5
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHhCCCCCCCCCCCccCCccccc
Q 005830 493 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDAS 550 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~-gi~v~~~TGd---------------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 550 (675)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+..............
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 3568999999999988 9999888876 3344445555555532110000000000
Q ss_pred cCcccHHHHhhhcCEEEecCH--HHHHHHHHHHHh----CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEE
Q 005830 551 IAALPVDELIEKADGFAGVFP--EHKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624 (675)
Q Consensus 551 ~~~~~~~~~~~~~~v~~r~~p--~~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~v 624 (675)
....+....| ..|...++.+.+ ....++++||+.||.+|++.|++|++++++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0002233333 245555555443 34569999999999999999999999999999999999999
Q ss_pred ecCCChhHHHHHHH
Q 005830 625 LTEPGLSVIISAVL 638 (675)
Q Consensus 625 l~~~~~~~i~~~i~ 638 (675)
+.+++-+++.++++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 99888888888875
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.27 E-value=6.2e-07 Score=86.67 Aligned_cols=123 Identities=15% Similarity=0.086 Sum_probs=80.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+.+++.+.++.+++.|+++.++|+..........+.+|+..... .+...+.. -.....|.-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----------------~~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD---IIIGGEDV----------------THHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS---EEECGGGC----------------SSCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee---eeeehhhc----------------CCCCCChHH
Confidence 36899999999999999999999999888888888888753210 00000000 000111233
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc----CCccHHHHhc-cCEEecCCChhHHHHHH
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSA-SDIVLTEPGLSVIISAV 637 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~----~~~~~~a~~~-ad~vl~~~~~~~i~~~i 637 (675)
-..+++.+.-....++++||+.||++|++.|++++++ +++.+..+.. ||+++ +++..+.+.+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRII--STLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEE--SSGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEE--CCHHHHHHhh
Confidence 3444455544456799999999999999999998877 3334444444 89998 4566666555
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.5e-06 Score=79.85 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhC--CCCCCCCCCCccCCccccccCccc
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLG--MGTNMYPSSSLLGQDKDASIAALP 555 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~~ 555 (675)
++.|++.++++.|+++|+++.++|+.+. ..+....+.+| +....... ....+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~-------- 96 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCP--HGPDDG-------- 96 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEEC--CCTTSC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcC--CCCCCC--------
Confidence 5789999999999999999999999875 45566667777 32110000 000000
Q ss_pred HHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc---cEEcCCccHHHH----hccCEEecCC
Q 005830 556 VDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----SASDIVLTEP 628 (675)
Q Consensus 556 ~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gia~~~~~~~a~----~~ad~vl~~~ 628 (675)
.-..+-.|+-=..+.+.+.-....++||||+.||+.|.++|++ ++..|.+..... ..+|+++ +
T Consensus 97 --------~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 97 --------CACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp --------CSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 0011122333455666666566789999999999999999996 565565444443 4579998 6
Q ss_pred ChhHHHHHHH
Q 005830 629 GLSVIISAVL 638 (675)
Q Consensus 629 ~~~~i~~~i~ 638 (675)
++..+.+.+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6888887664
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=3.8e-06 Score=78.71 Aligned_cols=136 Identities=11% Similarity=0.167 Sum_probs=84.8
Q ss_pred CccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHH--hcCCcEEEEecCCccCcceEE
Q 005830 337 GTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEA--RAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 337 GTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~~~~~~f~~~~k~~sv 414 (675)
||||+|+|.|..+.......+.+.++++.+++.++..+. ||++.|+++++...... .......+..|-.. ...
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G~G----v~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSE-HPLGTAITKYCKQELDTETLGTCIDFQVVPGCG----ISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSS-CHHHHHHHHHHHHHHTCSCCCCCBCCEEETTTE----EEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCC-CHHHHHHHHHHHhhcCCCCCCCccceEEeccce----EEE
Confidence 899999999988653111124567889999988887776 99999999876421000 01112222232211 111
Q ss_pred EEEcCC-----------------------------------------------CcEEEEEcCcHHHHHHhccCChHHHHH
Q 005830 415 TYIDSD-----------------------------------------------GNWHRASKGAPEQILALCNCREDVRKK 447 (675)
Q Consensus 415 ~~~~~~-----------------------------------------------g~~~~~~kGa~e~i~~~~~~~~~~~~~ 447 (675)
.+...+ .+.+.+..|++++|.+..-. .++.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLV---INND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCC---CCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCC---CCHH
Confidence 111100 01156778999998653211 1123
Q ss_pred HHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCC
Q 005830 448 VHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (675)
Q Consensus 448 ~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~ 493 (675)
+...+..+..+|..++.+|... +++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 4455677788999999999877 89999999985
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.24 E-value=8.9e-07 Score=84.13 Aligned_cols=119 Identities=16% Similarity=0.077 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
.+.+++.+.++.|++.|++++++|++...... ..+.+|+..... ..+..... -..+..|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~--~~~~~~~~-----------------~~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT--EILTSQSG-----------------FVRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE--EEECGGGC-----------------CCCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee--eEEecCcC-----------------CCCCCCcH
Confidence 35799999999999999999999999887777 777888742110 00000000 00112244
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCCccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+.+.+.-....++++||+.||++|++.|+++ ++++++. . .||+++ +++..+.+++
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 44566666665667899999999999999999997 7888765 2 689988 4576666544
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.22 E-value=1e-06 Score=87.11 Aligned_cols=122 Identities=16% Similarity=0.123 Sum_probs=85.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|+...... .+.+... ......|+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~-----------------~~~Kp~~~ 174 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--MLGGQSL-----------------PEIKPHPA 174 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTTTS-----------------SSCTTSSH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE--EEecccC-----------------CCCCcCHH
Confidence 4678999999999999999999999999989999999997532110 0000000 00111244
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE-cCC----ccHHHHhccCEEecCCChhHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-VAD----ATDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia-~~~----~~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
--..+++.+.-....++++||+.||++|.+.|++++. +.. +.+..+..+|+++ +++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~~ 240 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILK 240 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHHH
Confidence 5555666666566789999999999999999999844 332 2344567899998 45665543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.21 E-value=3.3e-06 Score=82.24 Aligned_cols=124 Identities=17% Similarity=0.125 Sum_probs=90.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++. +++.++|+..........+.+|+...... .+. .+.. -...-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~~------------~~~~-----~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--ITT------------SEEA-----GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE------------HHHH-----TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eEe------------cccc-----CCCCcCHH
Confidence 4678999999999999 99999999999888888888887532100 000 0000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCC---ccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~---vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+.+.+.-....++++||+. ||+.|.+.|+ ++++++++.+..+..||+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 44556666665667899999997 9999999999 57777776666777899999 56888887764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=84.33 Aligned_cols=126 Identities=14% Similarity=0.074 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|+++.++|+.....+....+. |+.........+.+... -.....|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~-----------------~~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDV-----------------KYGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTC-----------------SSCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhC-----------------CCCCCChH
Confidence 5679999999999999999999999887776666666 77532100000110000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCCccH----HHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD----AARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~~~----~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+.+.+.-....|+++||+.||+.|.+.|+++ +.+.++.. ..+..||+++ +++..+.++++
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 44455555555567799999999999999999994 44443322 2234699998 67888887764
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.21 E-value=5.7e-07 Score=94.81 Aligned_cols=108 Identities=13% Similarity=0.126 Sum_probs=75.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe---
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 568 (675)
-.++|++++.|+.||++|++|+|+||.....+..+|+++|+...+.+ ..+.+.......+ ...-.+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~-~~Vig~~l~~~~d----------G~~tg~~~~ 288 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE-EKVLGLRLMKDDE----------GKILPKFDK 288 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG-GGEEEECEEECTT----------CCEEEEECT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc-ceEEEeEEEEecC----------CceeeeecC
Confidence 45789999999999999999999999999999999999987433221 1121211110000 011111
Q ss_pred ----cCHHHHHHHHHHHHhC---CCEEEEECCCccCHHHHHh-CCccEEc
Q 005830 569 ----VFPEHKYEIVKRLQER---KHICGMTGDGVNDAPALKK-ADIGIAV 610 (675)
Q Consensus 569 ----~~p~~K~~iv~~l~~~---~~~v~~iGDg~ND~~al~~-A~vgia~ 610 (675)
+..+.|...|+.+... ...++++|||.||.+||++ +|.++++
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2357899999887432 2357889999999999996 6766665
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.20 E-value=2.9e-06 Score=83.42 Aligned_cols=127 Identities=12% Similarity=0.037 Sum_probs=82.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++.|++.+.++.|++.|+++.++|+..........+. |+.....+...+.+... -.....|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~-----------------~~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDV-----------------KYGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGC-----------------SSCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccC-----------------CCCCCCC
Confidence 35679999999999999999999999887766666666 77532100000000000 0112234
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCCc--cH--HHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--TD--AARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~--~~--~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+--..+.+.+.-....++++||+.||+.|.+.|++. +.+..+ .. ..+..||+++ +++..+..++.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 444566666666667899999999999999999975 344332 22 2234799999 56888877765
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.2e-06 Score=88.55 Aligned_cols=129 Identities=10% Similarity=-0.007 Sum_probs=88.3
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 492 DPPRHDSAETIRRALNLGV--NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi--~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
-++.|++.+.++.|++.|+ +++++|+.....+....+.+|+...... .+...... .......-
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--v~~~~~~~-------------~~~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG--LTYCDYSR-------------TDTLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE--EECCCCSS-------------CSSCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce--EEEeccCC-------------CcccCCCc
Confidence 3568999999999999999 9999999999999999999998642111 00000000 00011222
Q ss_pred CHHHHHHHHHHHHhCC-CEEEEECCCccCHHHHHhCCccEEcCCccHHH------HhccCEEecCCChhHHHHHH
Q 005830 570 FPEHKYEIVKRLQERK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a------~~~ad~vl~~~~~~~i~~~i 637 (675)
.|+--..+.+.+.-.. ..|+++||+.||+.|.++|++|.+++++.+.. ...||+++ +++..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 3444455666666566 78999999999999999999998886333222 33788998 5677666544
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.9e-06 Score=83.82 Aligned_cols=124 Identities=15% Similarity=0.101 Sum_probs=87.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+.+... ...+-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~-----------------~~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD--LIVGGDTF-----------------GEKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTSS-----------------CTTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe--EEEecCcC-----------------CCCCCChH
Confidence 468999999999999999999999999888889999999743210 00000000 01122355
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcC--CccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~--~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
-...+++.+.-....++++||+.||++|.+.|++. |++. .+.... ..+|+++ +++..+...+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 55666777765667899999999999999999987 6654 222222 5789988 56888877664
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.17 E-value=3.3e-06 Score=82.22 Aligned_cols=122 Identities=9% Similarity=0.039 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+...... .+..... -...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~--i~~~~~~-----------------~~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDS--IIGSGDT-----------------GTIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE--EEEETSS-----------------SCCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheee--EEccccc-----------------CCCCCChH
Confidence 4578999999999999999999999999999999999997532100 0000000 01112234
Q ss_pred HHHHHHHHHHhCCC-EEEEECCCccCHHHHHhCCc-cEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~-~v~~iGDg~ND~~al~~A~v-gia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+.+.+.-... .++++||+.||+.|.++|++ +|.++++.+ ..+|+++ +++..+.+++.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 44566666665666 79999999999999999997 666665543 3678887 56888887764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.16 E-value=3.5e-06 Score=84.39 Aligned_cols=127 Identities=11% Similarity=0.060 Sum_probs=87.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+...+.. -...-.|.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~----------------~~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP--ASTVFATDV----------------VRGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC--SEEECGGGS----------------SSCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC--ceEecHHhc----------------CCCCCCHH
Confidence 467899999999999999999999999988888888888643211 000000000 01112234
Q ss_pred HHHHHHHHHHhCC-CEEEEECCCccCHHHHHhCCc---cEEcCCc------------------------cHHHH-hccCE
Q 005830 573 HKYEIVKRLQERK-HICGMTGDGVNDAPALKKADI---GIAVADA------------------------TDAAR-SASDI 623 (675)
Q Consensus 573 ~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~v---gia~~~~------------------------~~~a~-~~ad~ 623 (675)
--..+.+.+.-.. ..|+||||+.||+.|.+.|++ +|++|.+ .+..+ ..+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 4455666666666 789999999999999999995 5655522 23333 35999
Q ss_pred EecCCChhHHHHHHHH
Q 005830 624 VLTEPGLSVIISAVLT 639 (675)
Q Consensus 624 vl~~~~~~~i~~~i~~ 639 (675)
++ +++..+..++..
T Consensus 253 v~--~~~~el~~~l~~ 266 (277)
T 3iru_A 253 VI--DSVADLETVITD 266 (277)
T ss_dssp EE--SSGGGTHHHHHH
T ss_pred Ee--cCHHHHHHHHHH
Confidence 99 668888877753
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.5e-06 Score=83.02 Aligned_cols=124 Identities=10% Similarity=0.072 Sum_probs=84.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (675)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+...... .+.. +.. -..+..
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~~~------------~~~-----~~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TFFA------------DEV-----LSYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EEEH------------HHH-----TCCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--heec------------ccc-----CCCCCC
Confidence 47899999999999999999999998 8888888888887432100 0000 000 011122
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccEEc---CCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgia~---~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
|+--..+.+.+.-....++++||+. ||+.|.+.|++++++ ++..+..+..+|+++ +++..+..++.
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 3333444555544456899999999 999999999999998 333333344578887 56777776653
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.4e-06 Score=83.33 Aligned_cols=121 Identities=14% Similarity=0.048 Sum_probs=85.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|++++++|+.....+....+.+|+...... .+..... -.....|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI--VLSGEEF-----------------KESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGC-----------------SSCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee--Eeecccc-----------------cCCCCChH
Confidence 4678999999999999999999999999999999999998532100 0000000 01112344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCC--ccHHHHhccCEEecCCChhHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD--ATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~--~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
--..+++.+.-....++++||+.||+.|.+.|++++.+.+ +....+..+|+++ +++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHH
Confidence 4456666666566789999999999999999999888742 2333446789998 4565554
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3.8e-06 Score=82.41 Aligned_cols=124 Identities=13% Similarity=0.048 Sum_probs=85.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...... .+..... -...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDS--CLSADDL-----------------KIYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGT-----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCE--EEEcccc-----------------CCCCCCHH
Confidence 4679999999999999999999999999888888899997532100 0000000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc---CCccHHHHhcc-CEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSAS-DIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~---~~~~~~a~~~a-d~vl~~~~~~~i~~~i 637 (675)
--..+.+.+.-....++++||+.||+.|.+.|++.... +++.+..+..+ |+++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 45556666665567899999999999999999965443 43322233457 9988 5677777655
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.5e-06 Score=85.44 Aligned_cols=137 Identities=14% Similarity=0.062 Sum_probs=87.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhh--cCEEEecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK--ADGFAGVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~r~~ 570 (675)
++.|++.+.++.|+++|+++.++|+.....+..+.+ |+... ..+.+...... ...+.....+ ...+.+..
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~----~~v~~~~~~~~--~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK----DRIYCNHASFD--NDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG----GGEEEEEEECS--SSBCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC----CeEEeeeeEEc--CCceEEecCCCCcccccccc
Confidence 578999999999999999999999999888887777 65321 11111100000 0000000000 00000112
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhc--cCEEecCCChhHHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~--ad~vl~~~~~~~i~~~i~~ 639 (675)
+..|..+++.+......++|+||+.+|+++.+.|++.++.....+..... +|+++ +++..+...+..
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 44688889988877889999999999999999999988753222233333 67776 678888887754
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.11 E-value=2.1e-06 Score=83.78 Aligned_cols=124 Identities=8% Similarity=0.030 Sum_probs=87.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..+..... -..+-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPV-----------------QVYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEESGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhh--eEEEeccc-----------------CCCCCCHH
Confidence 467999999999999999999999999888888888888743210 00000000 01223355
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC----CccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~----~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+.+.+.-....++++||+.||+.|.+.|++++++- +..+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 555666666655667999999999999999999998872 22233345689988 5677776655
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.10 E-value=4.4e-06 Score=81.29 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=78.8
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 494 PRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 494 lr~~~~~~i~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+.|++.+.++.|++. |+++.++|+.....+....+.+|+...... ...+.. +..+..|.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~------------------~~~~~k~~ 153 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFADD------------------ALDRNELP 153 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTTT------------------CSSGGGHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ceecCC------------------CcCccchH
Confidence 578999999999999 999999999999888888888887542210 010000 00000011
Q ss_pred --HHHHHHHHHH--hCCCEEEEECCCccCHHHHHhCCcc---EEcCCccHHHHh--ccCEEecCCChhHHHHHH
Q 005830 573 --HKYEIVKRLQ--ERKHICGMTGDGVNDAPALKKADIG---IAVADATDAARS--ASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 --~K~~iv~~l~--~~~~~v~~iGDg~ND~~al~~A~vg---ia~~~~~~~a~~--~ad~vl~~~~~~~i~~~i 637 (675)
--..+.+.+. -....++++||+.||+.|.+.|+++ ++.+.+...... .+|+++. ++..+...+
T Consensus 154 ~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 154 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 1133344444 3446799999999999999999954 444543333332 3899984 455555544
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.10 E-value=2.4e-06 Score=84.96 Aligned_cols=128 Identities=16% Similarity=0.041 Sum_probs=86.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+...... ..+..... ....+-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~-~i~~~~~~----------------~~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGE-HIYDPSWV----------------GGRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCS-CEECGGGG----------------TTCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccc-eEEeHhhc----------------CcCCCCChH
Confidence 3568999999999999999999999999889999999887421100 00000000 001111233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCCc-------c-HHHHhccCEEecCCChhHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADA-------T-DAARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~-------~-~~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
--..+.+.+.-....++++||+.||+.|.+.|+++ +.+..| . +.....+|+++ +++..+.+.+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 33445555554557799999999999999999998 444433 2 23344599999 679999888864
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1e-05 Score=77.97 Aligned_cols=135 Identities=16% Similarity=0.133 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
++.|++.++++.|+++|+++.++|+.. ...+....+.+|+... . .+............
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~---~-~~~~~~~~~~~~~~--- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---G-IYYCPHHPQGSVEE--- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---E-EEEECCBTTCSSGG---
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE---E-EEECCcCCCCcccc---
Confidence 678999999999999999999999998 3667777888887410 0 00000000000000
Q ss_pred HHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc--EEc--CCc-cHHHHhccCEEecCCChhH
Q 005830 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg--ia~--~~~-~~~a~~~ad~vl~~~~~~~ 632 (675)
........+-.|+--..+++.+.-....++||||+.||+.+.++|++. |.+ +.. .+.....+|+++ +++..
T Consensus 123 --~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 123 --FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp --GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred --cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 000000122234444555666655566799999999999999999964 344 322 233344689998 56888
Q ss_pred HHHHHH
Q 005830 633 IISAVL 638 (675)
Q Consensus 633 i~~~i~ 638 (675)
+.+++.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.1e-05 Score=77.10 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=85.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+..... ..+.+... -..+-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE--HVIISDFE-----------------GVKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCS--EEEEGGGG-----------------TCCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhcc--EEEEeCCC-----------------CCCCCCHH
Confidence 357899999999999999999999998888888888888753210 00000000 01112234
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccEEc---CCccHHHHh---ccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARS---ASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgia~---~~~~~~a~~---~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+.+.+.-....++++||+. ||+.|.+.|+++... +.+...... .+|+++ +++..+...+.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 33455566655566899999998 999999999997654 333333332 689988 56888777664
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.03 E-value=3e-06 Score=83.55 Aligned_cols=61 Identities=13% Similarity=0.287 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhC--CccEEcCCccHHHHhccCEEecC-CChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARSASDIVLTE-PGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A--~vgia~~~~~~~a~~~ad~vl~~-~~~~~i~~~i~ 638 (675)
+|...++.+.+.-. |+++||+.||.+||+.| +.||+|+|+ ++.||+++.+ ++-+++.++|+
T Consensus 160 ~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 160 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 79999999987643 99999999999999999 999999987 6789999977 66888888775
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.98 E-value=1e-05 Score=79.86 Aligned_cols=122 Identities=13% Similarity=0.093 Sum_probs=86.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++. +++.++|+........+.+.+|+... .+... +.. -...-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f~-----~~~~~-----------~~~-----~~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPWD-----MLLCA-----------DLF-----GHYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCCS-----EECCH-----------HHH-----TCCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCcc-----eEEee-----------ccc-----ccCCCCHH
Confidence 4568999999999986 99999999998888888889987411 00000 000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCC-----cc---HHH--HhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD-----AT---DAA--RSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~-----~~---~~a--~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+.+.+.-....|++|||+.||+.|.+.|++++++.+ |. +.. +..+|+++ +++..+..++.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 4455666665556789999999999999999999999964 21 122 56789999 67888887764
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.97 E-value=6e-06 Score=84.44 Aligned_cols=66 Identities=27% Similarity=0.309 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEec-CCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT-EPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~-~~~~~~i~~~i~ 638 (675)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++. +++-+++.++|+
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 688877777653 346999999999999999999999999999999999999998 888899998875
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.5e-05 Score=78.31 Aligned_cols=122 Identities=13% Similarity=0.126 Sum_probs=82.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. ... ..+.+... -...-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~--~~~~~~~~-----------------~~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD--FALGEKSG-----------------IRRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS--EEEEECTT-----------------SCCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee--EEEecCCC-----------------CCCCCCHHH
Confidence 5689999999999999999999999888888888888874 211 00000000 011122333
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc---EEcCCcc-HHHH-hccCEEecCCChhHHHHHH
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIG---IAVADAT-DAAR-SASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg---ia~~~~~-~~a~-~~ad~vl~~~~~~~i~~~i 637 (675)
=..+.+.+.-....++++||+.||+.|.++|++. ++++.+. +..+ ..+|+++ +++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 3445555655567899999999999999999994 4444333 3333 3689988 5677776554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.96 E-value=1.2e-05 Score=78.26 Aligned_cols=123 Identities=14% Similarity=0.095 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|+ .|+++.++|+..........+.+|+...... .+..... -.....|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK--IILSEDL-----------------GVLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE--EEEGGGT-----------------TCCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee--EEEeccC-----------------CCCCCCHH
Confidence 45789999999999 9999999999988888888888887532100 0000000 01112233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccEEcCCccH--HHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgia~~~~~~--~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+.+.+.-....++++||+. ||+.|.+.|++++++.+... ..+..+|+++ +++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 33444555544456899999995 99999999999999963322 4556799999 5677766543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.96 E-value=5.7e-06 Score=83.97 Aligned_cols=66 Identities=24% Similarity=0.311 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+..+..||+++.+++-+++.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 677777766553 347999999999999999999999999999999999999999888999998875
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.96 E-value=7.6e-06 Score=79.30 Aligned_cols=117 Identities=12% Similarity=-0.001 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--c
Q 005830 493 PPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~ 569 (675)
++.+++.+.++.|++.| +++.++|+..........+.+|+..... .+++. -
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~--------------------------~~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD--------------------------HIEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS--------------------------EEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh--------------------------eeeecCCC
Confidence 46789999999999999 9999999988888888888888743210 01222 2
Q ss_pred CHHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccEEcC-------CccHHHHhcc-CEEecCCChhHHHHHH
Q 005830 570 FPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVA-------DATDAARSAS-DIVLTEPGLSVIISAV 637 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgia~~-------~~~~~a~~~a-d~vl~~~~~~~i~~~i 637 (675)
.|+--..+.+.+.-....++++||+. ||+.|.+.|++++++- ++.......+ |+++ +++..+..++
T Consensus 159 k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 159 TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 34434445555555567899999996 9999999999988772 2222223334 8887 5677776553
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.95 E-value=8.7e-06 Score=81.82 Aligned_cols=67 Identities=22% Similarity=0.254 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
..|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++|+
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3677777666543 357999999999999999999999999999999999999998888889988875
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.7e-05 Score=78.07 Aligned_cols=123 Identities=11% Similarity=0.057 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|++. +++.++|+........+.+.+|+... .+... +.. ....-.|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~-----~~~~~-----------~~~-----~~~kp~~~ 173 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD-----VIIGS-----------DIN-----RKYKPDPQ 173 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS-----CCCCH-----------HHH-----TCCTTSHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee-----EEEEc-----------CcC-----CCCCCCHH
Confidence 5678999999999997 99999999999888899999997411 00000 000 01111233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccH---------H-HHhccCEEecCCChhHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATD---------A-ARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~---------~-a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
--..+.+.+.-....+++|||+.||+.|.+.|++++++.+... . .+..+|+++ +++..+..++..
T Consensus 174 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 174 AYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 3333444444445679999999999999999999999864211 1 256789999 679998887753
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.92 E-value=1.3e-05 Score=79.28 Aligned_cols=123 Identities=13% Similarity=0.107 Sum_probs=86.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+..... ..+..... -...-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~-----------------~~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAK-----------------RVFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGG-----------------TCCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhcc--EEEEcccc-----------------CCCCCCHH
Confidence 57799999999999 99999999999988888889998753210 00000000 01222344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCc---------------------------cHHHHhccCEEe
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARSASDIVL 625 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~---------------------------~~~a~~~ad~vl 625 (675)
--..+++.+.-....++++||+.||+.|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 55566666655566799999999999999999999888643 122344689988
Q ss_pred cCCChhHHHHHHH
Q 005830 626 TEPGLSVIISAVL 638 (675)
Q Consensus 626 ~~~~~~~i~~~i~ 638 (675)
+++..+...+.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 56888877664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.91 E-value=2.7e-06 Score=84.13 Aligned_cols=123 Identities=15% Similarity=0.115 Sum_probs=75.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia-~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
++.+++.+.++.|++.|+++.++|+.........- +..|+..... ..+.+.... .-...-.|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~--~~~~~~~~~---------------~~~~Kp~~ 174 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFS--HIVLGDDPE---------------VQHGKPDP 174 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSS--CEECTTCTT---------------CCSCTTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhee--eEEecchhh---------------ccCCCCCh
Confidence 46889999999999999999999998865544322 2223321100 000000000 00111122
Q ss_pred HHHHHHHHHHHhCC--CEEEEECCCccCHHHHHhCC---ccEEcCCccHHHHhccCEEecCCChhHHH
Q 005830 572 EHKYEIVKRLQERK--HICGMTGDGVNDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 572 ~~K~~iv~~l~~~~--~~v~~iGDg~ND~~al~~A~---vgia~~~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
+--..+.+.+.-.. ..+++|||+.||+.|.+.|+ ++++.+++.+..+..||+++ +++..+.
T Consensus 175 ~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~--~sl~el~ 240 (250)
T 3l5k_A 175 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL--NSLQDFQ 240 (250)
T ss_dssp HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC--SCGGGCC
T ss_pred HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee--cCHHHhh
Confidence 22233444443333 78999999999999999999 45555666666788999998 4565554
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.91 E-value=1.4e-05 Score=75.91 Aligned_cols=121 Identities=10% Similarity=0.077 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+...... .+.+... -...-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IFSAESV-----------------KEYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGGGG-----------------TCCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EEehhhc-----------------CCCCCCHH
Confidence 45689999 9999999 99999999998888888889987532100 0000000 01122355
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc-C---CccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~-~---~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+++.+. ...++++||+.||+.|.+.|+++..+ . +..+.....+|+++ +++..+...+.
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 198 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHHH
Confidence 4456666666 56799999999999999999998776 2 22222344689988 56877776653
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.90 E-value=1.8e-06 Score=82.77 Aligned_cols=120 Identities=10% Similarity=0.049 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+..... ..+..... -..+-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc--EEEecCcC-----------------CCCCCCcH
Confidence 4578999999999999 9999999999888888888877642110 00000000 01111233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC---C-ccHHHHhccCEEecCCChhHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA---D-ATDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~---~-~~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
--..+.+.+.-....++++||+.||+.|.+.|++++++. . ..+..+. +|+++. ++..+.+
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 335555555555668999999999999999999999873 2 2344444 999984 4555543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=7.1e-06 Score=81.10 Aligned_cols=66 Identities=18% Similarity=0.165 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhc-------cCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSA-------SDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~-------ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++. ||+++.+++-+++.++|+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 577777666543 346999999999999999999999999999988885 889998888899998875
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.90 E-value=1.8e-05 Score=77.01 Aligned_cols=124 Identities=11% Similarity=0.081 Sum_probs=84.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++. +++.++|+.....+....+.+|+...... .+..... -...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~~~-----------------~~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKD--IFVSEDT-----------------GFQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSE--EEEGGGT-----------------TSCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhhe--EEEeccc-----------------CCCCCChH
Confidence 4678999999999999 99999999998888888888887532100 0000000 01112233
Q ss_pred HHHHHHHHHH-hCCCEEEEECCCc-cCHHHHHhCCccE-EcCC--ccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQ-ERKHICGMTGDGV-NDAPALKKADIGI-AVAD--ATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~-~~~~~v~~iGDg~-ND~~al~~A~vgi-a~~~--~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+.+.+. -....++++||+. ||+.|.+.|+++. .+.. ..+..+..+|+++ +++..+.+++.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 3344444444 3446799999998 9999999999954 3443 3555667899998 56888877664
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.88 E-value=6.8e-06 Score=82.49 Aligned_cols=66 Identities=27% Similarity=0.282 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++.+++.++|+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 677777776553 356999999999999999999999999998989999999998888889988774
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.7e-05 Score=75.01 Aligned_cols=136 Identities=15% Similarity=0.074 Sum_probs=92.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
-++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+..... ..+....... ..-..+
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD--FIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE--EEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE--EEEEcccccc-------------ccCCCC
Confidence 35789999999999999999999998776 78888889999853210 0000000000 000122
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCccEEc-CCccH-----HHH-hccCEEecCCChhHHHHHHHHH
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV-ADATD-----AAR-SASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgia~-~~~~~-----~a~-~~ad~vl~~~~~~~i~~~i~~g 640 (675)
-.|+--..+++.+.-....++||||+ .+|+.+-++|++.... ..+.. ... ..+|.++...++..+.+++.+.
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 34555566667776666789999999 7999999999996544 32221 111 2679999766899999988776
Q ss_pred HH
Q 005830 641 RA 642 (675)
Q Consensus 641 r~ 642 (675)
+.
T Consensus 178 ~~ 179 (189)
T 3ib6_A 178 KK 179 (189)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=1.9e-05 Score=75.78 Aligned_cols=116 Identities=8% Similarity=-0.028 Sum_probs=78.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe----
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG---- 568 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r---- 568 (675)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+...... .+.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~-------------------------i~~~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG-------------------------IYGSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE-------------------------EEEECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee-------------------------eecCCCCCC
Confidence 357899999999999 999999999888888888888898532100 01111
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc---cEEcCCc-cHHHH-hccCEEecCCChhHHHHH
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-SASDIVLTEPGLSVIISA 636 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v---gia~~~~-~~~a~-~~ad~vl~~~~~~~i~~~ 636 (675)
-.|+-=..+.+.+.-....++++||+.||+.|.++|++ +++++.+ .+..+ ..+|+++ +++..+...
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~--~~~~el~~~ 208 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 11222222333333334679999999999999999999 6666644 33333 3689998 456666543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=5e-05 Score=73.40 Aligned_cols=122 Identities=9% Similarity=0.044 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE--ecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~~ 570 (675)
++.+++.+.++.++. +++++|+..........+.+|+..... ..... .+.. . .. ...
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~-~~~~~------------~~~~-~----~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA-PHIYS------------AKDL-G----ADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT-TCEEE------------HHHH-C----TTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhcc-ceEEe------------cccc-c----cCCCCcC
Confidence 356788888888774 899999999888888888888753210 00000 0000 0 00 112
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCCccH-------HHHhc-cCEEecCCChhHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARSA-SDIVLTEPGLSVIISAV 637 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~~~-------~a~~~-ad~vl~~~~~~~i~~~i 637 (675)
|+--..+++.+.-....++++||+.||+.|++.|+++ ++++++.. ..++. ||+++ +++..+...+
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 219 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVI 219 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHH
Confidence 3333455566655567899999999999999999998 66665433 35555 99998 4577776655
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.81 E-value=2.2e-05 Score=78.96 Aligned_cols=114 Identities=15% Similarity=0.006 Sum_probs=77.7
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 494 PRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 494 lr~~~~~~i~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. . ...+.+.... .....|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~-----------------~~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVK-----------------QGKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCS-----------------SCTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCC-----------------CCCCChH
Confidence 468999999999999 99999999999988888888888752 1 1111111000 0111233
Q ss_pred HHHHHHHHHHh-------CCCEEEEECCCccCHHHHHhCCccEEc---CCccHHHH-hccCEEecC
Q 005830 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAV---ADATDAAR-SASDIVLTE 627 (675)
Q Consensus 573 ~K~~iv~~l~~-------~~~~v~~iGDg~ND~~al~~A~vgia~---~~~~~~a~-~~ad~vl~~ 627 (675)
--..+.+.+.- ....|+++||+.||+.|++.|++++++ +++.+..+ ..||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 34455565554 456799999999999999999977665 43333333 358998843
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.78 E-value=3.8e-05 Score=72.31 Aligned_cols=93 Identities=10% Similarity=0.020 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+....... .+...-.|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~------------------------~~~~~~k~ 123 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHR------------------------EIYPGSKI 123 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEE------------------------EESSSCHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhccee------------------------EEEeCchH
Confidence 578999999999999999999999998 68899999999985321000 00001112
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia 609 (675)
+.-..+.+.+.-....++++||+.+|+.+.++|++...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 124 THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 22233444444345679999999999999999998543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.77 E-value=5.4e-05 Score=73.54 Aligned_cols=122 Identities=13% Similarity=0.106 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++ |+++.++|+..........+.++-.. ..+... ++. -..+..|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~f-----d~i~~~-----------~~~-----~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEF-----DHIITA-----------QDV-----GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCC-----SEEEEH-----------HHH-----TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCcc-----CEEEEc-----------ccc-----CCCCCCHH
Confidence 578999999999999 89999999988776666555433110 000000 000 01233455
Q ss_pred HHHHHHHHHH---hCCCEEEEECCCc-cCHHHHHhCCccEEcCCcc-----------HHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQ---ERKHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~---~~~~~v~~iGDg~-ND~~al~~A~vgia~~~~~-----------~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
-....++.++ -....+++|||+. ||+.|.++|++++++.+.. +..+..+|+++ +++..+.+.+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 4445533333 3456799999996 9999999999999984321 23346899999 5688888776
Q ss_pred H
Q 005830 638 L 638 (675)
Q Consensus 638 ~ 638 (675)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.75 E-value=3.1e-05 Score=77.22 Aligned_cols=66 Identities=26% Similarity=0.300 Sum_probs=54.9
Q ss_pred HHHHHHHHHHh----CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+ ....|+++||+.||.+|++.|++|++|+++.+..+..||+++.+.+-+++.++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 56655555543 3457999999999999999999999999988888999999998777778888775
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.74 E-value=3.5e-05 Score=72.19 Aligned_cols=107 Identities=12% Similarity=0.001 Sum_probs=69.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+.|++.+.++.|++.|++++++|+... .+....+.+|+...... .+.+.. .-.....|+-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~--~~~~~~-----------------~~~~kp~~~~ 142 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTE--VVTSSS-----------------GFKRKPNPES 142 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEE--EECGGG-----------------CCCCTTSCHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheee--eeeccc-----------------cCCCCCCHHH
Confidence 578999999999999999999998764 56667777776421100 000000 0001112333
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad 622 (675)
-..+.+.+.-. .++++||+.||..|++.|++++++.+.....++..+
T Consensus 143 ~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 143 MLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 34444444333 799999999999999999999888654455554443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.71 E-value=1.8e-05 Score=79.01 Aligned_cols=124 Identities=15% Similarity=0.169 Sum_probs=85.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+.|++.++++.|++.|+++.++|+.... ...+.+.+|+...... .+.+ +.. -...-.|+-
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~--~~~~------------~~~-----~~~Kp~~~~ 166 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDF--VLTS------------EAA-----GWPKPDPRI 166 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSC--EEEH------------HHH-----SSCTTSHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhE--EEee------------ccc-----CCCCCCHHH
Confidence 5699999999999999999999986654 5777788887432100 0000 000 012334555
Q ss_pred HHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccEEcCCccHH------HHhccCEEecCCChhHHHHHHHH
Q 005830 574 KYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVADATDA------ARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgia~~~~~~~------a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
-..+++.+.-....++||||+. ||+.|.++|++++++.+.... ....+|+++ +++..+..++..
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~~ 237 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALDC 237 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHHH
Confidence 5667777766667899999997 999999999999988532211 223689998 568888877643
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00011 Score=72.49 Aligned_cols=117 Identities=14% Similarity=0.021 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--cC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--VF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~ 570 (675)
++.+++.+.++.|+ .|+++.++|+..........+.+|+..... .+++. -.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~--------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP--------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC--------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc--------------------------eeeeeCCCC
Confidence 45799999999999 999999999999888888888888743210 11222 23
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccEEcC-CccH--------HHHhccCE-EecCCChhHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAVA-DATD--------AARSASDI-VLTEPGLSVIISAVL 638 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgia~~-~~~~--------~a~~~ad~-vl~~~~~~~i~~~i~ 638 (675)
|+--..+++.+.-....|+++||+. ||+.|.+.|++++++- .+.. .....+|+ ++ +++..+..++.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 4544566666665667899999999 9999999999997763 3221 11235787 66 56877776664
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00024 Score=68.12 Aligned_cols=123 Identities=17% Similarity=0.137 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+...... .+.... .-..+-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~--~~~~~~-----------------~~~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDV--MVFGDQ-----------------VKNGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECGGG-----------------SSSCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccc--cccccc-----------------cCCCcccHH
Confidence 3568999999999999999999999999999999999998542110 000000 001223455
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-E-Ec--C-CccHHHHhc-cCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-I-AV--A-DATDAARSA-SDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-i-a~--~-~~~~~a~~~-ad~vl~~~~~~~i~~~i 637 (675)
-=..+++.+.-....++||||+.+|+.+-++|++. | ++ | +..+...++ ++.+. + ...+++.+
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l 212 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHH
Confidence 55566677766677899999999999999999984 2 22 3 333444444 44444 3 34455544
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00015 Score=68.50 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=71.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.| ++.++|+.+......+.+.+|+...... .+.. +.. -..+..|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~--~~~~------------~~~-----~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLA--FFTS------------SAL-----GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSC--EEEH------------HHH-----SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcce--EEee------------ccc-----CCCCCCHH
Confidence 36799999999999999 9999999999888888888887432100 0000 000 01223344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA 611 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~ 611 (675)
--..+++.+.-....++++||+.||+.|.+.|++...+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 445566666655678999999999999999999987764
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.43 E-value=3.3e-05 Score=76.51 Aligned_cols=56 Identities=23% Similarity=0.200 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHh-----CCCEEEEECCCccCHHHHHhCCccEEcCCcc-HHHHhccCEEecC
Q 005830 572 EHKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIGIAVADAT-DAARSASDIVLTE 627 (675)
Q Consensus 572 ~~K~~iv~~l~~-----~~~~v~~iGDg~ND~~al~~A~vgia~~~~~-~~a~~~ad~vl~~ 627 (675)
.+|...++.+.+ ....|+++||+.||.+||+.|++|++|+++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 357666666543 3457999999999999999999999999887 6677788887643
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.39 E-value=4.9e-05 Score=72.63 Aligned_cols=101 Identities=6% Similarity=-0.024 Sum_probs=68.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEE
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (675)
++.|++.+.++.|++ |++++++|+........+.+. .|+..... ..+. .+.. -.
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~--~~~~------------~~~~-----~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFD--KVYA------------SCQM-----GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSS--EEEE------------HHHH-----TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcC--eEEe------------eccc-----CC
Confidence 457899999999999 999999999887776666555 45422100 0000 0000 01
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCc
Q 005830 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADA 613 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~ 613 (675)
.+-.|+--..+++.+.-....++++||+.||+.|.+.|+++..+.++
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 22234445556666655567899999999999999999999988643
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.37 E-value=4.1e-05 Score=74.05 Aligned_cols=108 Identities=19% Similarity=0.071 Sum_probs=66.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCCCccCCccccccCcccH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 556 (675)
.++.|++.++|+.|++.|+++.++|+... .......+.+|+.....-... .... ....
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-~~~~--g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACA-YHEA--GVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEC-CCTT--CCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeEEEee-cCCC--Ccee----
Confidence 56789999999999999999999999987 577778888887311000000 0000 0000
Q ss_pred HHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 557 DELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 557 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
+ .........-.|.-=..+.+.+.-....++||||+.||+.+.+.|++..
T Consensus 128 -~-~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -L-AIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -T-CCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -e-cccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 0 0000001111233333445555444567999999999999999999864
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00064 Score=64.46 Aligned_cols=120 Identities=10% Similarity=0.023 Sum_probs=74.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|+++|+++.++||.....+..+.. .. ....+.+... -..+-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~----~d~v~~~~~~-----------------~~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV----NDWMIAAPRP-----------------TAGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT----TTTCEECCCC-----------------SSCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc----CCEEEECCcC-----------------CCCCCChH
Confidence 567999999999999999999999998776644433 10 0001100000 01122333
Q ss_pred HHHHHHHHHHhCC-CEEEEECCCccCHHHHHhCCc-cEEcCCccH---------------------------HHHhccCE
Q 005830 573 HKYEIVKRLQERK-HICGMTGDGVNDAPALKKADI-GIAVADATD---------------------------AARSASDI 623 (675)
Q Consensus 573 ~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~v-gia~~~~~~---------------------------~a~~~ad~ 623 (675)
--....+.+.-.. ..++||||..+|+.+-++|++ .|++..+.. .....+|+
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~ 171 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHS 171 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCE
Confidence 3333444444322 569999999999999999997 455532210 11235899
Q ss_pred EecCCChhHHHHHHH
Q 005830 624 VLTEPGLSVIISAVL 638 (675)
Q Consensus 624 vl~~~~~~~i~~~i~ 638 (675)
++ +++..+..++.
T Consensus 172 vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 172 VI--DHLGELESCLA 184 (196)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred Ee--CCHHHHHHHHH
Confidence 98 56888877663
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00045 Score=68.66 Aligned_cols=123 Identities=11% Similarity=0.108 Sum_probs=84.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++ ++++.++|+.+...+....+.+|+...... .+.+... -..+-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~--i~~~~~~-----------------~~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA--IVIGGEQ-----------------KEEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE--EEEGGGS-----------------SSCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhhe--EEecCCC-----------------CCCCCCHH
Confidence 567999999999998 599999999998888888889998532110 0000000 01223355
Q ss_pred HHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCc--cEEcCCcc---HHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADI--GIAVADAT---DAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~v--gia~~~~~---~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+++.+.-....++||||+ .||+.+-++|++ .|.+..+. +.....+|+++ +++..+..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 5555666666556789999995 999999999999 57775321 11234688888 4577776655
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0014 Score=60.08 Aligned_cols=133 Identities=12% Similarity=0.059 Sum_probs=81.0
Q ss_pred cccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHH--hcCCcEEEEecCCccCcceEEEE
Q 005830 339 LTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEA--RAGVREVHFLPFNPVDKRTALTY 416 (675)
Q Consensus 339 LT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~--~~~~~~~~~~~f~~~~k~~sv~~ 416 (675)
||+|+|.|.++.......+.+.++++.+++..+..+. ||++.|+++++...... .......+.+|-.. ....+
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G~G----v~a~v 75 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSE-HPLGVAVTKYCKEELGTETLGYCTDFQAVPGCG----IGCKV 75 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSC-STTHHHHHHHHHHHHTCCCCCCEEEEEEETTTE----EEEEE
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCC-ChHHHHHHHHHHHhcCCCCCCCcCceEEecCcc----EEEEE
Confidence 8999999987653110012466789999988887776 99999999876422000 01122333333221 11122
Q ss_pred EcC------------------------------CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEE
Q 005830 417 IDS------------------------------DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVA 466 (675)
Q Consensus 417 ~~~------------------------------~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a 466 (675)
... ..+.+.+.-|+++.+.+..-. .+..+...+..+..+|..++.++
T Consensus 76 ~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 76 SNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLT---ISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp ECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCS---SCHHHHHHHHHHHTTTSEEEEEE
T ss_pred cCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCC---CCHHHHHHHHHHHhCCCeEEEEE
Confidence 111 012246678999987653211 11234445566778899999999
Q ss_pred eeccCCcCCCCCCCCcEEEEEecccC
Q 005830 467 RQEIPEKTKESPGAPWQLVGLLPLFD 492 (675)
Q Consensus 467 ~~~~~~~~~~~~e~~l~~lG~i~~~d 492 (675)
... .++|++++.|
T Consensus 153 ~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 153 IDG-------------VLCGMIAIAD 165 (165)
T ss_dssp ETT-------------EEEEEEEECC
T ss_pred ECC-------------EEEEEEEEEC
Confidence 877 8999999987
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00063 Score=67.69 Aligned_cols=60 Identities=20% Similarity=0.172 Sum_probs=43.0
Q ss_pred HHHHHHHhCCCEEEEECCC-ccCHHHHHhCC---ccEEcCCccHHHHh--------ccCEEecCCChhHHHHHH
Q 005830 576 EIVKRLQERKHICGMTGDG-VNDAPALKKAD---IGIAVADATDAARS--------ASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 576 ~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~---vgia~~~~~~~a~~--------~ad~vl~~~~~~~i~~~i 637 (675)
.+.+.+.-....++|+||+ .||+.|.+.|+ ++|+.|.+...... .+|+++ +++..+.+++
T Consensus 195 ~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~--~~~~el~~~l 266 (268)
T 3qgm_A 195 EALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVF--NSLKDMVEAL 266 (268)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEE--CCHHHHHHHH
Confidence 3444444445679999999 69999999999 67777754433222 689998 5688877654
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00029 Score=68.00 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=76.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++. +++.++|+.... .+.+|+..... .+. ..+.. -...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~---~~~-----------~~~~~-----~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFA---FAL-----------CAEDL-----GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCS---EEE-----------EHHHH-----TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHee---eeE-----------Ecccc-----CCCCcCHH
Confidence 4678999999999998 999999987643 23344421100 000 00000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccEEc---C-CccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV---A-DATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgia~---~-~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+.+.+.-....++++||+. ||+.|.+.|+++.++ + +..+. ...+|+++ +++..+.+++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 44566666665667899999998 999999999998877 2 22222 56789998 56888877664
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00026 Score=74.31 Aligned_cols=138 Identities=13% Similarity=0.084 Sum_probs=82.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+.........+.+..... .........-..+-.|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~------~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------AENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------HHHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc------cccccccccCCCCCCHH
Confidence 578899999999999999999999999988888888999854211001111000000 00000000000122232
Q ss_pred HHHHHHHHHH--------------hCCCEEEEECCCccCHHHHHhCCcc-EEcCCcc-------HHHHhccCEEecCCCh
Q 005830 573 HKYEIVKRLQ--------------ERKHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAARSASDIVLTEPGL 630 (675)
Q Consensus 573 ~K~~iv~~l~--------------~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~~-------~~a~~~ad~vl~~~~~ 630 (675)
-=....+.+. -....++||||+.+|+.+-++|++. |++..+. +.....||+++ +++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCH
Confidence 2222223222 1246799999999999999999985 4443221 12233689998 568
Q ss_pred hHHHHHHH
Q 005830 631 SVIISAVL 638 (675)
Q Consensus 631 ~~i~~~i~ 638 (675)
..+...+.
T Consensus 367 ~eL~~~l~ 374 (384)
T 1qyi_A 367 GELRGVLD 374 (384)
T ss_dssp GGHHHHHS
T ss_pred HHHHHHHH
Confidence 87776653
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00018 Score=63.27 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+...... .+.. +.. ...+..|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~~------------~~~-----~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDK--VLLS------------GEL-----GVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSE--EEEH------------HHH-----SCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccE--EEEe------------ccC-----CCCCCCHH
Confidence 4668899999999999999999999988877777788876432100 0000 000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
--..+.+.+.-....++|+||+.+|+.+.+++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 44445555544455799999999999999999984
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00014 Score=72.41 Aligned_cols=58 Identities=21% Similarity=0.292 Sum_probs=48.0
Q ss_pred HHHHHHHHHH-HhCCCEEEEECC----CccCHHHHHhCC-ccEEcCCccHHHHhccCEEecCCC
Q 005830 572 EHKYEIVKRL-QERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEPG 629 (675)
Q Consensus 572 ~~K~~iv~~l-~~~~~~v~~iGD----g~ND~~al~~A~-vgia~~~~~~~a~~~ad~vl~~~~ 629 (675)
-+|..-++.| .-....|+++|| +.||.+||+.|+ +|++|+|+.+..++.||+++.+++
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 3688788877 112467999999 999999999999 599999999999999999886554
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.99 E-value=5.5e-05 Score=71.89 Aligned_cols=94 Identities=5% Similarity=-0.018 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEE-----
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF----- 566 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----- 566 (675)
++.|++.+.++.|++.|++++++|+........+.+. .|+ ...+. .++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l------------------------~~~f~--~~~~~~~~ 144 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEI------------------------RDAAD--HIYLSQDL 144 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHH------------------------HHHCS--EEEEHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccCh------------------------hhhee--eEEEeccc
Confidence 4579999999999999999999998654322211111 111 11100 011
Q ss_pred --EecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCC
Q 005830 567 --AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (675)
Q Consensus 567 --~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~ 612 (675)
.+-.|+--..+++.+.-....++++||+.||+.|.+.|++...+.+
T Consensus 145 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 192 (206)
T 2b0c_A 145 GMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 192 (206)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEec
Confidence 1223445556666666566789999999999999999999877753
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0018 Score=64.29 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=33.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 533 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TG---d~~~~a~~ia~~~gi~ 533 (675)
.+-++++++|++++++|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3447899999999999999999988 6666666777788874
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0013 Score=64.88 Aligned_cols=117 Identities=10% Similarity=0.083 Sum_probs=79.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+...... .+.+.+. -..+-.|
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--i~~~~~~-----------------~~~KP~p 173 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--IADAGKC-----------------KNNKPHP 173 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--ECCGGGC-----------------CSCTTSS
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--eeccccc-----------------CCCCCcH
Confidence 3567999999999999999998877654 34566788898542110 0000000 0123345
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCccHHHHhccCEEecCCChhHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~~~~a~~~ad~vl~~~~~~~i 633 (675)
+-=..+++.+.-....++||||+.+|+.+-++|++ .|++++..+. ..||+++ +++..+
T Consensus 174 ~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi--~~l~eL 232 (250)
T 4gib_A 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVV--DSTNQL 232 (250)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEE--SSGGGC
T ss_pred HHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEE--CChHhC
Confidence 55566777776667789999999999999999998 5666543332 3589998 456655
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00033 Score=67.91 Aligned_cols=102 Identities=9% Similarity=-0.072 Sum_probs=69.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEE
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (675)
++.|++.+.++.|++. +++.++|+........+.+. .|+..... .+. ..+. .-.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd---~i~-----------~~~~-----~~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFE---KTY-----------LSYE-----MKM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCS---EEE-----------EHHH-----HTC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCC---EEE-----------eecc-----cCC
Confidence 3569999999999999 99999999988877766533 33311000 000 0000 001
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCcc
Q 005830 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADAT 614 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~ 614 (675)
.+-.|+--..+++.+.-....|++|||+.||+.|.++|+++..+.++.
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~ 219 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAG 219 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCH
Confidence 233455556677777666778999999999999999999998886443
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0045 Score=61.47 Aligned_cols=42 Identities=14% Similarity=0.000 Sum_probs=36.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~T---Gd~~~~a~~ia~~~gi~ 533 (675)
.++-+++.++++++++.|++++++| |..........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5567899999999999999999999 88888777777888874
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0003 Score=69.33 Aligned_cols=52 Identities=19% Similarity=0.262 Sum_probs=42.0
Q ss_pred HHHHHHHHH-HhCCCEEEEECC----CccCHHHHHhCCc-cEEcCCccHHHHhccCEE
Q 005830 573 HKYEIVKRL-QERKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARSASDIV 624 (675)
Q Consensus 573 ~K~~iv~~l-~~~~~~v~~iGD----g~ND~~al~~A~v-gia~~~~~~~a~~~ad~v 624 (675)
+|..-++.+ .-....|+++|| |.||.+||+.|+. |++|+|+.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 577666666 112468999999 9999999999987 999999999999999876
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0031 Score=61.08 Aligned_cols=114 Identities=10% Similarity=0.083 Sum_probs=72.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.| ++.++|+.....+....+.+|+...... .+....
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~-------------------------~~~~~~--- 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEG-------------------------RVLIYI--- 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTT-------------------------CEEEES---
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCe-------------------------eEEecC---
Confidence 57899999999999999 9999999988888888888887421100 011111
Q ss_pred HHHHHHHHHH--hCCCEEEEECCCcc---CHHHHHhCCcc-EEcCCc----c-HHHHhc--cCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQ--ERKHICGMTGDGVN---DAPALKKADIG-IAVADA----T-DAARSA--SDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~--~~~~~v~~iGDg~N---D~~al~~A~vg-ia~~~~----~-~~a~~~--ad~vl~~~~~~~i~~~i 637 (675)
.|..+++.+. -....++||||+.+ |..+-+.|++. |.+..+ . +..++. +|+++ +++..+...+
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~l 222 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEMD 222 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGCG
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHHH
Confidence 1222232222 24568999999999 66666677763 333322 2 233333 89988 4566655443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0017 Score=63.87 Aligned_cols=84 Identities=15% Similarity=0.059 Sum_probs=63.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (675)
.++.|++.+.++.|++.|+++.++||.+. ..+..-.+.+||..... ..++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~-------------------------~~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND-------------------------KTLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST-------------------------TTEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc-------------------------ceeEe
Confidence 45679999999999999999999999865 46777778889863100 01343
Q ss_pred ecCHHHHHHHHHHHHhC-CCEEEEECCCccCHHH
Q 005830 568 GVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPA 600 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~a 600 (675)
|-....|....+.+.+. -.+|+++||..+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 43345678888888874 4578999999999986
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.018 Score=56.60 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=34.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 005830 494 PRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~T---Gd~~~~a~~ia~~~gi~ 533 (675)
+-+...++++.+++.|+++.++| |.+........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 99888888877887774
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0018 Score=63.69 Aligned_cols=84 Identities=13% Similarity=0.037 Sum_probs=62.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (675)
.++.|++.+.++.|++.|+++.++||.+. ..+..-.+.+||..... ..++-
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~-------------------------~~Lil 154 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE-------------------------SAFYL 154 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG-------------------------GGEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc-------------------------cceec
Confidence 45679999999999999999999999865 46677777899863100 01333
Q ss_pred ecCHHHHHHHHHHHHhCC-CEEEEECCCccCHHH
Q 005830 568 GVFPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~a 600 (675)
|-....|....+.+.+.| ..|+++||..+|.++
T Consensus 155 r~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 155 KKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 433345777777777774 578999999999886
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0018 Score=60.04 Aligned_cols=103 Identities=11% Similarity=0.024 Sum_probs=62.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCCCccCC-c-cccccCcc
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQ-D-KDASIAAL 554 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~-~-~~~~~~~~ 554 (675)
-++.|++.++++.|++.|+++.++|+. ....+..+.+.+|+... ..+... . ....
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~v~~s~~~~~~~~---- 112 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD----EVLICPHLPADEC---- 112 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEE----EEEEECCCGGGCC----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCee----EEEEcCCCCcccc----
Confidence 357899999999999999999999997 45667778888887410 000000 0 0000
Q ss_pred cHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCC
Q 005830 555 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVAD 612 (675)
Q Consensus 555 ~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~ 612 (675)
...+-.|+-=..+.+.+.-....++||||+.+|+.+.+.|++. |.+..
T Consensus 113 ----------~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~ 161 (176)
T 2fpr_A 113 ----------DCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDR 161 (176)
T ss_dssp ----------SSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBT
T ss_pred ----------cccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcC
Confidence 0000111111122333333455799999999999999999985 44443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0021 Score=61.76 Aligned_cols=118 Identities=9% Similarity=-0.010 Sum_probs=69.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+... .+....+.+|+...... .+.+.. . -..+-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~--~~~~~~---------~--------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDA--LALSYE---------I--------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSE--EC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeE--EEeccc---------c--------CCCCCCHH
Confidence 3569999999999999999999998866 46778888887532100 000000 0 01112232
Q ss_pred HHHHHHHHHHhCCCEEEEECCCcc-CHHHHHhCCccEEc-CCccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVN-DAPALKKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~N-D~~al~~A~vgia~-~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+++.+.-. . +||||+.+ |+.+.+.|++.... ..+... .+. +.++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~-~~~i--~~l~el~~~l 214 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV-RDRV--KNLREALQKI 214 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC-CSCB--SSHHHHHHHH
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc-ceEE--CCHHHHHHHH
Confidence 233344444322 2 99999999 99999999986554 322110 111 3343 4577666555
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0086 Score=60.61 Aligned_cols=97 Identities=10% Similarity=-0.038 Sum_probs=66.7
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHH--------hCCCCCCCCCCCccCCccccccCcccHH
Q 005830 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG---KETGRR--------LGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 489 ~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
..++++.|++.++++.|++.|+++.++||.....+ ...-+. .|+... ..+.....
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~---------- 249 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLV----MQCQREQG---------- 249 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCS----EEEECCTT----------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCch----heeeccCC----------
Confidence 34678899999999999999999999999875432 233333 676210 00000000
Q ss_pred HHhhhcCEEEecCHHHHHHHHHHHHhCCC-EEEEECCCccCHHHHHhCCcc
Q 005830 558 ELIEKADGFAGVFPEHKYEIVKRLQERKH-ICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~al~~A~vg 607 (675)
..+-.|+-|..+.+.+..... .++|+||..+|+.|-++|++-
T Consensus 250 --------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 250 --------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp --------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred --------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 012347778888888854443 468999999999999999985
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.92 E-value=0.014 Score=57.66 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=34.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHhCCC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 533 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~T---Gd~~~~a~~ia~~~gi~ 533 (675)
++ ++++++|++++++|++++++| |..........+++|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 45 899999999999999999999 77777777778888874
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.0062 Score=60.36 Aligned_cols=113 Identities=12% Similarity=0.014 Sum_probs=73.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh---CCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL---GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
-++.|++.++++.|+++|+++.++|+.+...+..+-+.+ |+...... +.+. .+..+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~---i~~~------------------~~~~K 187 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG---HFDT------------------KIGHK 187 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSE---EECG------------------GGCCT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccE---EEec------------------CCCCC
Confidence 367899999999999999999999998887766665543 34321100 0000 00123
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcC-Ccc---HHHHhccCEEe
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA-DAT---DAARSASDIVL 625 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~-~~~---~~a~~~ad~vl 625 (675)
-.|+-=..+.+.+.-....++||||..+|+.+-++|++- |.+. .+. +.....+|.++
T Consensus 188 P~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i 249 (261)
T 1yns_A 188 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249 (261)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred CCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEE
Confidence 334544566677766667899999999999999999984 3442 121 11223567777
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.012 Score=57.56 Aligned_cols=109 Identities=8% Similarity=0.006 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+...... .+.+.+. -..+-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~--i~~~~~~-----------------~~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTF--CADASQL-----------------KNSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSE--ECCGGGC-----------------SSCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccc--ccccccc-----------------cCCCCcHH
Confidence 4679999999999999999999997653 4556677887532110 0000000 01223355
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCccHHHHhccCEEec
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLT 626 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~~~~a~~~ad~vl~ 626 (675)
-=....+.+.-....|+||||+.+|+.+-++|++ .|++..|. ..+|.++.
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 4456667776667789999999999999999998 45555432 24677663
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.62 E-value=0.018 Score=55.69 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=36.3
Q ss_pred HHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCccEEc---CCcc-HHHH---hccCEEec
Q 005830 575 YEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---SASDIVLT 626 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgia~---~~~~-~~a~---~~ad~vl~ 626 (675)
..+.+.+.-....|+++||+ .||+.|++.|++++++ |++. +..+ ..+|+++.
T Consensus 183 ~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred HHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 33444444445679999999 7999999999998654 4333 3333 36899884
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.0042 Score=61.06 Aligned_cols=49 Identities=20% Similarity=0.203 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhCCCEEEEECC----CccCHHHHHhCC-ccEEcCCccHHHHhcc
Q 005830 573 HKYEIVKRLQERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSAS 621 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~A~-vgia~~~~~~~a~~~a 621 (675)
+|..-++.|.+....|+++|| |.||.+||+.|+ +|++|+++.+..+..+
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~ 240 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVE 240 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHH
Confidence 787777777766678999999 799999999996 8999999888877544
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.27 E-value=0.023 Score=58.00 Aligned_cols=117 Identities=13% Similarity=0.100 Sum_probs=72.3
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh----CCCCCCCCCCCccCCcccccc---Cc-ccH-HHH
Q 005830 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL----GMGTNMYPSSSLLGQDKDASI---AA-LPV-DEL 559 (675)
Q Consensus 489 ~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~----gi~~~~~~~~~~~~~~~~~~~---~~-~~~-~~~ 559 (675)
.....+.|+.++.++.|+++|++|+++||-....++.+|..+ ||+. ..+.|....... .. ... .+.
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~-----e~ViG~~~~~~~~~~~~~~~~~~~~ 213 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKP-----ENVIGVTTLLKNRKTGELTTARKQI 213 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCG-----GGEEEECEEEECTTTCCEECHHHHH
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCH-----HHeEeeeeeeecccccccccccccc
Confidence 344467899999999999999999999999999999999985 4432 122221110000 00 000 000
Q ss_pred hh---------hcCEEEe-----cCHHHHHHHHHHHHhC-CCEEEEECCC-ccCHHHHHh--CCccEEc
Q 005830 560 IE---------KADGFAG-----VFPEHKYEIVKRLQER-KHICGMTGDG-VNDAPALKK--ADIGIAV 610 (675)
Q Consensus 560 ~~---------~~~v~~r-----~~p~~K~~iv~~l~~~-~~~v~~iGDg-~ND~~al~~--A~vgia~ 610 (675)
.. +.....+ .--+.|..-|+..-.. ...+++.||+ ..|.+||+. ++.|+++
T Consensus 214 ~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 214 AEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp HTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred ccccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 00 0011111 2246788888776543 3568999999 579999975 5556655
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.67 E-value=0.019 Score=56.63 Aligned_cols=41 Identities=15% Similarity=0.179 Sum_probs=33.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHhCCC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMG 533 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~---~~a~~ia~~~gi~ 533 (675)
++.|++.++|+.|++.|+++.++||... ..+...-+.+|+.
T Consensus 101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999883 3444555677885
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.12 Score=50.28 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=36.4
Q ss_pred CCEEEEECCCc-cCHHHHHhCCccE-EcCCc---c-HHH--HhccCEEecCCChhHHHHHHH
Q 005830 585 KHICGMTGDGV-NDAPALKKADIGI-AVADA---T-DAA--RSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 585 ~~~v~~iGDg~-ND~~al~~A~vgi-a~~~~---~-~~a--~~~ad~vl~~~~~~~i~~~i~ 638 (675)
...|+|+||+. ||+.|.+.|++-. .+..| . +.. ...+|+++ +++..+...+.
T Consensus 196 ~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~--~~l~~l~~~l~ 255 (259)
T 2ho4_A 196 PEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTC--ESFPHAVDHIL 255 (259)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEE--SCHHHHHHHHH
T ss_pred hHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEE--CCHHHHHHHHH
Confidence 45799999998 9999999999844 33332 1 111 24588888 67888776653
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=93.18 E-value=0.029 Score=53.51 Aligned_cols=89 Identities=18% Similarity=0.186 Sum_probs=54.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH----HHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE--
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKE----TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-- 567 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~----ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 567 (675)
+.+++.+.++.|+++|+++.++|+.+...+.. +.+..+... .+... ..+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 46799999999999999999999986432222 232233210 00000 0011
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEc
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 610 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~ 610 (675)
+-.|+-... .+++.|. ++|+||..+|+.+-++|++- |.+
T Consensus 145 KP~p~~~~~---~~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v 184 (211)
T 2b82_A 145 KPGQNTKSQ---WLQDKNI-RIFYGDSDNDITAARDVGARGIRI 184 (211)
T ss_dssp CTTCCCSHH---HHHHTTE-EEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHH---HHHHCCC-EEEEECCHHHHHHHHHCCCeEEEE
Confidence 112332233 3344454 99999999999999999984 444
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=92.89 E-value=0.15 Score=55.45 Aligned_cols=97 Identities=6% Similarity=-0.032 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC------CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEE
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGD------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (675)
++.|++.+.++.|+++|+++.++|+. ......... .|+.... ...+.+. +. -.
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~f--d~i~~~~------------~~-----~~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMHF--DFLIESC------------QV-----GM 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTTS--SEEEEHH------------HH-----TC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhhe--eEEEecc------------cc-----CC
Confidence 46799999999999999999999985 222111111 1322110 0000000 00 01
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
.+-.|+--..+.+.+.-....+++|||+.||+.+.++|++....
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 23345555666777766667899999999999999999997655
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=91.97 E-value=0.14 Score=51.54 Aligned_cols=61 Identities=10% Similarity=0.101 Sum_probs=40.7
Q ss_pred HHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccEEc---CCcc-HHHH---------hccCEEecCCChhHHHHHHH
Q 005830 576 EIVKRLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADAT-DAAR---------SASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 576 ~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgia~---~~~~-~~a~---------~~ad~vl~~~~~~~i~~~i~ 638 (675)
.+.+.+.-....|+||||+. ||+.|.+.|++...+ |... +... ..+|+++ +++..+...++
T Consensus 223 ~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi--~~l~el~~~l~ 297 (306)
T 2oyc_A 223 CITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYV--ESIADLTEGLE 297 (306)
T ss_dssp HHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEE--SSGGGGGGGC-
T ss_pred HHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEE--CCHHHHHHHHH
Confidence 33344433446799999996 999999999997766 2222 2222 3689998 56777776654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=90.78 E-value=0.21 Score=52.86 Aligned_cols=40 Identities=10% Similarity=0.108 Sum_probs=33.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHhCCC
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQ------------LAIGKETGRRLGMG 533 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~------------~~~a~~ia~~~gi~ 533 (675)
+-|++.++|+.|+++|+++.++|+.+ ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 12266777888874
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=90.22 E-value=0.0047 Score=58.01 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=33.7
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCC
Q 005830 492 DPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGM 532 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi 532 (675)
-++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 35789999999999999 999999999887666666666554
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=89.56 E-value=0.47 Score=46.29 Aligned_cols=115 Identities=12% Similarity=-0.006 Sum_probs=63.8
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH--HHH-HHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE-
Q 005830 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG- 565 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~--a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 565 (675)
-...+.+++.++++.|+ .|+++ ++|+..... +.. +....++ ...++.......+
T Consensus 123 ~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l--------------------~~~f~~~~~~~~~~ 180 (264)
T 1yv9_A 123 DTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSV--------------------VTFVETATQTKPVY 180 (264)
T ss_dssp CTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHH--------------------HHHHHHHHTCCCEE
T ss_pred CCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHH--------------------HHHHHHHhCCCccc
Confidence 34567789999999997 89987 777654310 000 0000000 0011111111111
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCcc-EEc--CCccH-HHHh---ccCEEec
Q 005830 566 FAGVFPEHKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIG-IAV--ADATD-AARS---ASDIVLT 626 (675)
Q Consensus 566 ~~r~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vg-ia~--~~~~~-~a~~---~ad~vl~ 626 (675)
..+-.|+-=..+.+.+.-....++||||+ .||+.+.++|++. |.+ |.+.. ..+. .+|+++.
T Consensus 181 ~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 181 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred cCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEe
Confidence 22333444455556665556689999999 6999999999986 333 43321 2222 5899883
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=89.25 E-value=0.46 Score=46.47 Aligned_cols=92 Identities=13% Similarity=0.035 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh--C---------CCCCCCCCCCccCCccccccCcccHHHHhh
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL--G---------MGTNMYPSSSLLGQDKDASIAALPVDELIE 561 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (675)
++.|++.+.++. |+++.++|+.+...+..+-+.+ | +... .. ..++....
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~---------------~~-~~f~~~~~ 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY---------------ID-GYFDINTS 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG---------------CC-EEECHHHH
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh---------------cc-eEEeeecc
Confidence 567899988887 9999999999988777766655 3 2100 00 00000100
Q ss_pred hcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 562 KADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 562 ~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
-.+-.|+-=..+.+.+.-....++|+||..+|+.+-++|++-.
T Consensus 185 ----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 185 ----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp ----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred ----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 0233455556666777666678999999999999999999843
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=87.52 E-value=0.64 Score=40.90 Aligned_cols=41 Identities=15% Similarity=0.007 Sum_probs=34.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHhCCCC
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMGT 534 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~---~~~a~~ia~~~gi~~ 534 (675)
+-+++.++|++++++|++++++||++ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 34789999999999999999999998 456666777788753
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=85.40 E-value=0.009 Score=56.26 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=32.2
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhCC
Q 005830 493 PPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGM 532 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi 532 (675)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999876555555555554
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=85.04 E-value=0.7 Score=42.15 Aligned_cols=101 Identities=7% Similarity=-0.054 Sum_probs=59.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---CHHH---HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEE
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGD---QLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd---~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (675)
++.||+.+.++.|++. +++.++|+- .... ...+.+..|.... .. .++
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~---~~-----------------------~i~ 121 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP---QH-----------------------FVF 121 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCG---GG-----------------------EEE
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc---cc-----------------------EEE
Confidence 5789999999999985 999999987 2111 2223333443210 00 112
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHH
Q 005830 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
+.-. .| + ..++++||+.+|+. ++|+-.|++..+.. ....++.++ +++..+..++
T Consensus 122 ~~~~--~~------l----~~~l~ieDs~~~i~--~aaG~~i~~~~~~~-~~~~~~~~i--~~~~el~~~l 175 (180)
T 3bwv_A 122 CGRK--NI------I----LADYLIDDNPKQLE--IFEGKSIMFTASHN-VYEHRFERV--SGWRDVKNYF 175 (180)
T ss_dssp CSCG--GG------B----CCSEEEESCHHHHH--HCSSEEEEECCGGG-TTCCSSEEE--CSHHHHHHHH
T ss_pred eCCc--Ce------e----cccEEecCCcchHH--HhCCCeEEeCCCcc-cCCCCceec--CCHHHHHHHH
Confidence 2111 11 1 35789999999985 56765555543221 113567777 5687777655
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=84.92 E-value=2.4 Score=41.25 Aligned_cols=122 Identities=16% Similarity=0.091 Sum_probs=63.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE-EEecC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-FAGVF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~r~~ 570 (675)
..+.+++.++++.|+ .|+++ ++|+........ -++ +.. . .--...++.......+ ..+-.
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~----~~~---------l~~-~---~~l~~~~~~~~~~~~~~~~KP~ 189 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGE----EGI---------YPG-A---GSIIAALKVATNVEPIIIGKPN 189 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEET----TEE---------EEC-H---HHHHHHHHHHHCCCCEECSTTS
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCC----CCC---------cCC-c---HHHHHHHHHHhCCCccEecCCC
Confidence 355679999999999 89998 777544211000 000 000 0 0000011111111111 12223
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCcc-EEcCCc--c-HHHHh---ccCEEecCCChhHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVADA--T-DAARS---ASDIVLTEPGLSVIISA 636 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg-ia~~~~--~-~~a~~---~ad~vl~~~~~~~i~~~ 636 (675)
|+-=..+.+. -....++||||+. +|+.+-+.|++. +.+..| . +.... .+|+++ +++..+.+.
T Consensus 190 ~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~--~~l~el~~~ 259 (263)
T 1zjj_A 190 EPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVL--PSVYELIDY 259 (263)
T ss_dssp HHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEE--SSGGGGGGG
T ss_pred HHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEE--CCHHHHHHH
Confidence 3333333343 4467899999995 999999999985 444322 2 22222 588988 456665543
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=83.23 E-value=0.48 Score=43.71 Aligned_cols=90 Identities=12% Similarity=0.055 Sum_probs=61.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
.+||++.+.++.+++. +++++.|.-....|..+.+.+|..... . ..+.+.. ...
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f-~-~~~~rd~-----------------------~~~ 108 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAF-R-ARLFRES-----------------------CVF 108 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCE-E-EEECGGG-----------------------SEE
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcE-E-EEEeccC-----------------------cee
Confidence 4799999999999998 999999999999999999999975310 0 0000000 000
Q ss_pred HHHHHHHHHHhC---CCEEEEECCCccCHHHHHhCCccE
Q 005830 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 573 ~K~~iv~~l~~~---~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
.|..+++.++.. ...|+++||..++..+=..+++-|
T Consensus 109 ~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 109 HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 122233333333 357999999999998766666554
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.49 E-value=0.43 Score=44.62 Aligned_cols=90 Identities=12% Similarity=0.048 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
.+||++.+.++.|++. +++++.|.-....|..+.+.+|+.... . ..+.+.. ...
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f-~-~~l~rd~-----------------------~~~ 121 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVF-R-ARLFRES-----------------------CVF 121 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCE-E-EEECGGG-----------------------CEE
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccE-E-EEEEccc-----------------------cee
Confidence 5799999999999998 999999999999999999999975311 0 0000000 001
Q ss_pred HHHHHHHHHHhC---CCEEEEECCCccCHHHHHhCCccE
Q 005830 573 HKYEIVKRLQER---KHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 573 ~K~~iv~~l~~~---~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
.|..+++.++.. ...|++++|..++..+=..|++-|
T Consensus 122 ~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 122 HRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp ETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred cCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 122233344433 346999999999998766665544
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=81.27 E-value=1.1 Score=43.51 Aligned_cols=38 Identities=11% Similarity=0.132 Sum_probs=35.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
+.+.++|++|+++|++++++||++...+..+.+.+|+.
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45999999999999999999999999999999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 675 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-30 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 5e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-28 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-13 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-10 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-08 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 1e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 3e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 4e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 1e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 1e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 8e-04 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 123 bits (309), Expect = 1e-30
Identities = 52/327 (15%), Positives = 100/327 (30%), Gaps = 93/327 (28%)
Query: 22 IPIEEVFEQLKCSRE-GLTSDEGAHRLHVFGPNKL-EEKKESKVLKFLGFMWNPLSWVME 79
EE S GLT D+ L +G N+L E+ +S + + L ++
Sbjct: 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66
Query: 80 AAAIMAIAL---ANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK 136
AA ++ L G + + I+++L+ N+ + +E NA NA AL
Sbjct: 67 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 137 TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196
T+ D P +L E GE L
Sbjct: 127 TE-------------------------QDKTPLQQKLDE-----------FGEQL----- 145
Query: 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 256
++ +++ G V + + I
Sbjct: 146 -------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK---------I 183
Query: 257 AVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 316
AV L + IP +P V++ +A+G+ R++++ AI
Sbjct: 184 AVA-------------------------LAVAAIPEGLPAVITTCLALGTRRMAKKNAIV 218
Query: 317 KRMTAIEEMAGMDVLCSDKTGTLTLNK 343
+ + ++E + + ++
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 111 bits (278), Expect = 5e-29
Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM-GTNMYPSSS 541
DPPR + +I+ + G+ V MITGD RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 542 LLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601
+ + E +A FA V P HK +IV+ LQ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 602 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 115 bits (288), Expect = 2e-28
Identities = 30/346 (8%), Positives = 80/346 (23%), Gaps = 37/346 (10%)
Query: 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV---DRNLIEVFAKG---------VEKEH 362
+ + + + + + + + ++ I K +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 363 VILLAARASRTENQD--AIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD 420
I L + + + A + + + + L + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 421 GNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480
+ + A + + + + + A+ + + + + K+
Sbjct: 146 NIYAALEEFATTE----LHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 481 PWQLVGLLPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 538
++ G + P + + G + + TG LG+
Sbjct: 202 TFKT-GYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 539 SSSLLGQD--------KDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590
D A P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 591 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 628
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.4 bits (208), Expect = 5e-20
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 31/155 (20%)
Query: 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL 542
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 543 LGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602
P K E VK+LQ K + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 603 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 79.7 bits (196), Expect = 1e-18
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 138 KVLRDGRWSEQ--DASILVPGDVISIKLGDIVPADARLLEGDP--LKIDQSALTGESLPV 193
KV R R S Q A +VPGD++ + +GD VPAD R+L L++DQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 194 TKNP-------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232
K+ + +FSG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 67.6 bits (164), Expect = 2e-13
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 27/148 (18%)
Query: 377 DAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKR--TALTYIDSDGNWHRASKGA 430
DA ++A++ + ++ R +V + FN +K + D+ + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 431 PEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------ 474
PE+IL C+ ++++ + G R LG + +P
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 475 -----KESPGAPWQLVGLLPLFDPPRHD 497
P VGL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 59.2 bits (142), Expect = 2e-10
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 6/157 (3%)
Query: 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIA 552
R E + + +I+G + +Y + + D
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDY----- 129
Query: 553 ALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612
+ +D + K ++ L E M GD V D A K +D+ A
Sbjct: 130 -IHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.1 bits (142), Expect = 2e-10
Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 25/190 (13%)
Query: 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVI 364
G + + + + + E+A + LC+D + K G E +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETK-------GVYEKVGEATETAL 85
Query: 365 L-LAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNW 423
L + + + + + A R +++ L F+ K ++ + +
Sbjct: 86 TTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR 145
Query: 424 HR-----ASKGAPEQILALCNCR----------EDVRKKVHAVIDKF--AERGLRSLGVA 466
KGAPE ++ CN V++K+ +VI ++ LR L +A
Sbjct: 146 AAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 205
Query: 467 RQEIPEKTKE 476
++ P K +E
Sbjct: 206 TRDTPPKREE 215
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 5e-08
Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 13/151 (8%)
Query: 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI--CGMTGDGVNDA 598
L E + K +++K L+E+ H M GDG D
Sbjct: 130 RLKFYFNG---------EYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 599 PALKKADIGIAVA--DATDAARSASDIVLTE 627
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 50.1 bits (119), Expect = 1e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.1 bits (113), Expect = 9e-07
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 630 LSVIISAV 637
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.4 bits (109), Expect = 3e-06
Identities = 11/58 (18%), Positives = 17/58 (29%)
Query: 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 627
+ K + V + + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 46.0 bits (107), Expect = 4e-06
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 625
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 626 TEPGLSVIISAV 637
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.4 bits (106), Expect = 7e-06
Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 55/193 (28%)
Query: 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDEL 559
E+IR A G+ V +++G+ + + LG+ ++ + + D D SI +E
Sbjct: 27 ESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEG 86
Query: 560 IEK---------------------ADGFAGVFPEHKYEIVKRLQERKHI----------- 587
K A + PE + K + R +
Sbjct: 87 TNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLM 146
Query: 588 -----------------------CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ GD ND P + A+ATD ++ SD V
Sbjct: 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 206
Query: 625 LTEPGLSVIISAV 637
I
Sbjct: 207 SDYSYGEEIGQIF 219
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.8 bits (97), Expect = 1e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 573 HKYEIVKRLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
K + + + I GDG ND L+ A IG+A+ A + ++A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 644
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 592 GDGVNDAPALKKADIGIAVADATDAARSASDIV 624
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.6 bits (91), Expect = 8e-04
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 624
+ + +R+ +K + GD ND ++A + +A+ +A + + ASDIV
Sbjct: 193 KALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 675 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.98 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.9 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.79 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.48 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.29 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.24 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.17 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.05 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.04 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.04 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.02 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.98 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.9 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.89 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.87 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.86 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.86 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.72 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.56 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.39 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.14 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.85 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.84 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.78 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.71 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.64 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.52 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.41 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.39 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.35 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.05 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.04 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.94 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.85 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 96.8 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.66 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.65 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.33 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.11 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.08 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.62 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.56 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.52 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.45 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.33 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.69 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.53 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.4 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 93.66 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 93.52 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.13 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 92.92 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 92.61 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 86.03 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.98 E-value=1.8e-32 Score=253.04 Aligned_cols=149 Identities=38% Similarity=0.520 Sum_probs=132.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCC-ccCCccccccCcccHHHHhhhcCEEEecC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS-LLGQDKDASIAALPVDELIEKADGFAGVF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (675)
||+|++++++|+.||++||++||+|||+..||.++|+++||......... .............+..+..++..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 99999999999999999999999999999999999999999754332211 11112223455667778888999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
|+||..+|+.+|+.|++|+|+|||.||++||++|||||++++++++++++||+++++++|+.++++|+||
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=2.4e-29 Score=222.38 Aligned_cols=125 Identities=34% Similarity=0.495 Sum_probs=109.7
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhh
Q 005830 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (675)
Q Consensus 483 ~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (675)
+..+.++++|++|++++++|+.|+++|++++|+|||+..+|.++|+++||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 345678999999999999999999999999999999999999999999995
Q ss_pred cCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 563 ~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.+|++++|++|..+++.+|+. ++|+|+|||.||+|||++|||||+++++++.++++||+++++++|+.|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 379999999999999999875 58999999999999999999999999999999999999999999999998874
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=6.1e-28 Score=261.88 Aligned_cols=261 Identities=19% Similarity=0.211 Sum_probs=194.6
Q ss_pred CccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC---C
Q 005830 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG---G 92 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~ 92 (675)
++|..++||++++|++| ++|||++|+++|+++||+|+++.++ .++|+.++++|++|+.++++++++++++++.. .
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 47999999999999999 7899999999999999999999876 67788999999999999999999999997642 2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEE
Q 005830 93 GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADAR 172 (675)
Q Consensus 93 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~ 172 (675)
.....|.+++.++++++++..++++||+|++++++++++..++. ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 22357899999999999999999999999999999988766543 35677777765
Q ss_pred EEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCCCchHHHHHHHHHHH
Q 005830 173 LLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFC 252 (675)
Q Consensus 173 vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (675)
+.+ +||+.+. +.+.|..+|..|..|++...+...
T Consensus 138 l~~-----------~g~~i~~------------------~~~~~~~~~~~~~~~~~~~~~~~~----------------- 171 (472)
T d1wpga4 138 LDE-----------FGEQLSK------------------VISLICVAVWLINIGHFNDPVHGG----------------- 171 (472)
T ss_dssp HHH-----------HHHHHHH------------------HHHHHHHHHHHHCCTTSSSCCSSS-----------------
T ss_pred HHH-----------HHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHhhh-----------------
Confidence 432 1111100 000011111222222111111000
Q ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEE
Q 005830 253 ICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 332 (675)
Q Consensus 253 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~ 332 (675)
.....+.+.+..++++.++++|++||++++++++++++||+|+|+++|+..++|++|+..+.|
T Consensus 172 -----------------~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 172 -----------------SWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp -----------------CSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 011334556777888899999999999999999999999999999999999999999999999
Q ss_pred ecCC--CccccCceeeeeeeee---ecccCCCcHHHHHH
Q 005830 333 SDKT--GTLTLNKLTVDRNLIE---VFAKGVEKEHVILL 366 (675)
Q Consensus 333 ~DKT--GTLT~~~~~v~~~~~~---~~~~~~~~~~~l~~ 366 (675)
+||| +|||.|.+.+....+. ......++-+++.+
T Consensus 235 ~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwi 273 (472)
T d1wpga4 235 MKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWV 273 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHH
T ss_pred hHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHH
Confidence 9998 9999998776432221 12234555565544
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=9.4e-26 Score=192.16 Aligned_cols=97 Identities=40% Similarity=0.589 Sum_probs=88.2
Q ss_pred eEEEEECCeE--EEEEcCCccCCcEEEecCCCeeeeeEEEEec--CCeeEeeccccCCCcccccCCC-------------
Q 005830 136 KTKVLRDGRW--SEQDASILVPGDVISIKLGDIVPADARLLEG--DPLKIDQSALTGESLPVTKNPY------------- 198 (675)
Q Consensus 136 ~~~V~r~g~~--~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g--~~~~Vdes~LTGEs~pv~K~~~------------- 198 (675)
.++|+|+|++ ++|++++|+|||+|.|++|++|||||+|+++ ..+.||||+|||||.|+.|.++
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5799999985 7899999999999999999999999999864 3578999999999999999753
Q ss_pred CccccceeeeeceEEEEEEEecchhhhhhhhhhh
Q 005830 199 DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 232 (675)
Q Consensus 199 ~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~ 232 (675)
|.+|+||.+.+|.+.++|++||.+|.+|++.+++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999987653
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.90 E-value=1.1e-27 Score=252.59 Aligned_cols=311 Identities=10% Similarity=-0.029 Sum_probs=203.5
Q ss_pred hhhhhhcCceEEEecCCCccccCceeeeeeeee-----ecccCCCcH-HHHHHHHHH----ccccCcChHHHHHHhhcCC
Q 005830 320 TAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE-----VFAKGVEKE-HVILLAARA----SRTENQDAIDAAIVGMLAD 389 (675)
Q Consensus 320 ~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~-----~~~~~~~~~-~~l~~~~~~----~~~~~~~~~~~ai~~~~~~ 389 (675)
.+.|.||...++|+|||||+|.+.|.+..+... ....+...+ +++.....+ .....+++...+++.....
T Consensus 31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (380)
T d1qyia_ 31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDEP 110 (380)
T ss_dssp HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSSC
T ss_pred hchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHhh
Confidence 445889999999999999999999987542211 001122222 222111111 0112224555555544332
Q ss_pred hHH----HhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEE
Q 005830 390 PKE----ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGV 465 (675)
Q Consensus 390 ~~~----~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~ 465 (675)
... .+..+.....+||++.+++|++.....++.+..+.+|+++.+. ..+.....+...+..++++|+|++++
T Consensus 111 ~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~a~~~~r~l~~ 186 (380)
T d1qyia_ 111 VELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----VSDATLFSLKGALWTLAQEVYQEWYL 186 (380)
T ss_dssp HHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----CSCCGGGSTTCHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----CcHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 222 2344556667899999999876543333333444566665532 12222344566778899999999999
Q ss_pred EeeccCCcCCCCCCCCcEEEEEecccCCCCc--chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCcc
Q 005830 466 ARQEIPEKTKESPGAPWQLVGLLPLFDPPRH--DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL 543 (675)
Q Consensus 466 a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~--~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~ 543 (675)
|++..+..+... ...+...|++..++++|| +++++++.|+++|++++|+|||+..+|..+++++||.........+.
T Consensus 187 ~~~~~~~~~~~~-~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~ 265 (380)
T d1qyia_ 187 GSKLYEDVEKKI-ARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIAT 265 (380)
T ss_dssp HHHHHHHHHCSC-CSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEEC
T ss_pred hhhccccccccc-chhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEe
Confidence 988664332221 122344688999999766 99999999999999999999999999999999999964322211111
Q ss_pred CCccc--------cccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCC---ccEEcC-
Q 005830 544 GQDKD--------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVA- 611 (675)
Q Consensus 544 ~~~~~--------~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~---vgia~~- 611 (675)
+.+.. .....+.-...+.....++|.+|.+|..+++.++..++.|+|+|||.||++|++.|| |||+||
T Consensus 266 ~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~ 345 (380)
T d1qyia_ 266 ASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345 (380)
T ss_dssp HHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBT
T ss_pred cchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCC
Confidence 11100 000011111222333468899999999999999999999999999999999999999 999998
Q ss_pred CccHHHHh----ccCEEecCCChhHHHHHH
Q 005830 612 DATDAARS----ASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 612 ~~~~~a~~----~ad~vl~~~~~~~i~~~i 637 (675)
.+++..++ .||+++ +++..+..++
T Consensus 346 ~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 346 KGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 56655443 799999 6677776654
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.79 E-value=9.3e-19 Score=168.36 Aligned_cols=123 Identities=22% Similarity=0.342 Sum_probs=99.9
Q ss_pred CcChHHHHHHhhc----CChHHHhcCCcEEEEecCCccCcceEEEEEcC--CCcEEEEEcCcHHHHHHhcc---------
Q 005830 375 NQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDS--DGNWHRASKGAPEQILALCN--------- 439 (675)
Q Consensus 375 ~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~--~g~~~~~~kGa~e~i~~~~~--------- 439 (675)
.++|.+.|++.++ .+....+..+..+..+||+|.+|+|+++++.. ++++++|+|||||.|+++|+
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred ccChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCcee
Confidence 3589999998765 35566778899999999999999999999864 46788999999999999997
Q ss_pred -CChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcC-----------CCCCCCCcEEEEEecccCCCCcc
Q 005830 440 -CREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT-----------KESPGAPWQLVGLLPLFDPPRHD 497 (675)
Q Consensus 440 -~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i~~~d~lr~~ 497 (675)
.++..++.+.+.+++|+.+|+|||++||+.++.++ .+..+++|+|+|+++++||+|++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred echHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 35677889999999999999999999999987653 24457899999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.48 E-value=1e-14 Score=142.24 Aligned_cols=97 Identities=24% Similarity=0.378 Sum_probs=80.4
Q ss_pred hcCCcEEEEecCCccCcceEEEEEcCCC-----cEEEEEcCcHHHHHHhcc----------CChHHHHHHHHHHHHH--H
Q 005830 394 RAGVREVHFLPFNPVDKRTALTYIDSDG-----NWHRASKGAPEQILALCN----------CREDVRKKVHAVIDKF--A 456 (675)
Q Consensus 394 ~~~~~~~~~~~f~~~~k~~sv~~~~~~g-----~~~~~~kGa~e~i~~~~~----------~~~~~~~~~~~~~~~~--~ 456 (675)
+..++.+..+||+|.||||+++++..++ .+.+|+|||||.|+++|+ .+.+.++.+.+.++++ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 4567889999999999999999987554 368999999999999997 2456777888888876 6
Q ss_pred HcCCeEEEEEeeccCCcCC----------CCCCCCcEEEEEecc
Q 005830 457 ERGLRSLGVARQEIPEKTK----------ESPGAPWQLVGLLPL 490 (675)
Q Consensus 457 ~~G~r~l~~a~~~~~~~~~----------~~~e~~l~~lG~i~~ 490 (675)
++|+|||+||||+++..+. +.+|++|+|+|++++
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999976532 235789999999985
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.29 E-value=7.3e-12 Score=120.58 Aligned_cols=148 Identities=20% Similarity=0.220 Sum_probs=104.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC-C-c----------------------------
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS-S-L---------------------------- 542 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~-~---------------------------- 542 (675)
.+.+.+.++|++|+++|++++++||++...+...+..+++........ . +
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 477899999999999999999999999999999999998854211000 0 0
Q ss_pred --cCCccc----------cccCcccHHHHhhhcC-----------EEEecCHHHHHHHHHHHHh----CCCEEEEECCCc
Q 005830 543 --LGQDKD----------ASIAALPVDELIEKAD-----------GFAGVFPEHKYEIVKRLQE----RKHICGMTGDGV 595 (675)
Q Consensus 543 --~~~~~~----------~~~~~~~~~~~~~~~~-----------v~~r~~p~~K~~iv~~l~~----~~~~v~~iGDg~ 595 (675)
...... .......+.+++++.. +-.......|...++.+.+ ....|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000000 0011112233332211 1222234567777766654 346799999999
Q ss_pred cCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 596 ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
||.+|++.|++||+|+++.+.++++||+|+.+++..+++++++..
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999887653
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.24 E-value=2.5e-11 Score=116.88 Aligned_cols=148 Identities=20% Similarity=0.151 Sum_probs=104.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCC--c-cCC-c--------------------
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSS--L-LGQ-D-------------------- 546 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~--~-~~~-~-------------------- 546 (675)
+.++.+++.++++.|++.|++++++||++...+..++..+|+......... + ... .
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 455778999999999999999999999999999999999998643221000 0 000 0
Q ss_pred ---------------cccccCcccHHHHhh---hc--CE-----EEecCH--HHHHHHHHHHHhC----CCEEEEECCCc
Q 005830 547 ---------------KDASIAALPVDELIE---KA--DG-----FAGVFP--EHKYEIVKRLQER----KHICGMTGDGV 595 (675)
Q Consensus 547 ---------------~~~~~~~~~~~~~~~---~~--~v-----~~r~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ 595 (675)
..........+.+.. .. .+ +....| .+|...++.+.+. ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 000011111222111 11 11 112223 4788888776543 34699999999
Q ss_pred cCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 596 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 596 ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
||.+|++.|++||||+++.+.+++.||+++..++..++.++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999998886
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.17 E-value=4e-11 Score=109.99 Aligned_cols=101 Identities=25% Similarity=0.249 Sum_probs=82.9
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (675)
.+|+.|++.|+.+.++||+....+...++++++.. ++... .+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~~--~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLGK--LEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEESC--SCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------ccccc--ccHHHHHH
Confidence 47999999999999999999999999999999852 22222 33444444
Q ss_pred HH----HhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhH
Q 005830 580 RL----QERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 580 ~l----~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~ 632 (675)
.+ .-....|+++||+.||.+||+.|++|+|++++.+.+++.||+|+..+.-.+
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCc
Confidence 33 333578999999999999999999999999999999999999998876554
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.05 E-value=2.1e-10 Score=113.42 Aligned_cols=66 Identities=23% Similarity=0.213 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|...++.+.+. ...++++|||.||.+||+.|+.|++|+|+.+.++..||+++..++-.++.++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 698888888764 346999999999999999999999999999999999999999888889998875
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.04 E-value=1.7e-10 Score=114.85 Aligned_cols=70 Identities=23% Similarity=0.293 Sum_probs=61.2
Q ss_pred cCHH--HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 569 VFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 569 ~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
++|. .|...++.+.+. ...|+++|||.||.+||+.|+.|+||+|+++.+++.||+++..++-+++.++|+
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4454 798888888663 346999999999999999999999999999999999999999888889988875
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=9.9e-11 Score=111.91 Aligned_cols=129 Identities=18% Similarity=0.138 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+++|++.+.|+.||+.|++++++||.....+..+++.+|+.....-...+ ....++.... .........+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~-----~~~~~G~~~g----~~~~~p~~~~~ 152 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRL-----KFYFNGEYAG----FDETQPTAESG 152 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECE-----EECTTSCEEE----ECTTSGGGSTT
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeee-----eeeehhcccc----ceeeeeeeccc
Confidence 36899999999999999999999999999999999999996321000000 0000000000 00000013357
Q ss_pred HHHHHHHHHHhC--CCEEEEECCCccCHHHHHhCCccEEcCC--ccHHHHhccCEEecCCChhH
Q 005830 573 HKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVAD--ATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 573 ~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~vgia~~~--~~~~a~~~ad~vl~~~~~~~ 632 (675)
.|.++++.++.+ ...++++|||.||.+|++.||++||++. .....++.||+++. +|..
T Consensus 153 ~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 153 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred hHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 799999998764 3469999999999999999999999973 44667778999984 4543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=9.6e-11 Score=115.81 Aligned_cols=71 Identities=21% Similarity=0.252 Sum_probs=61.9
Q ss_pred ecCHH--HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 568 GVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 568 r~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.++|. +|...++.|.+. ...|+++|||.||.+||+.|+.|++|+|+++.+|+.||+|+.+++-+++.+.|+
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 44554 599888888663 346999999999999999999999999999999999999999889999988886
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.98 E-value=3.6e-10 Score=108.37 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=105.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+......+.......... ...-.......++..|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~------~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH------IDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE------EECTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcce------eccccccccccccCCHH
Confidence 468999999999999999999999999999999999998754321111100000000 00000001124566788
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHh-ccCEEecCCChhHHHHHHHHHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARS-ASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~-~ad~vl~~~~~~~i~~~i~~gr~~~~~i 647 (675)
.|..+++.++..++.|+|+||+.||.+|+++||+++|++...+.+++ ..+++ .-++|+.+...++.-..+.+.+
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCee-ecCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999865455544 34443 3468999988887655555444
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.90 E-value=1.1e-09 Score=103.04 Aligned_cols=136 Identities=21% Similarity=0.150 Sum_probs=93.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++.+++.+.++.++..|..+.++||.....+....++.++................. ... .....+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTG----DVE-----GEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEE----EEE-----CSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccc----ccc-----cccccccccc
Confidence 4677899999999999999999999999999999999888753211000000000000 000 0000000112
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
.....+.+.++.....++++|||.||.+|++.||+|||| ++.+..++.||+++..+|+.+|++.|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 223344444444566799999999999999999999999 78899999999999988999887654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.89 E-value=5.7e-10 Score=109.60 Aligned_cols=67 Identities=25% Similarity=0.283 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
.|...++.|.++ ...++++|||.||.+||+.|+.|+||+|+.+.+++.||+|+..++-+++.++|+.
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 688888777653 4579999999999999999999999999999999999999998889999998853
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.87 E-value=3.5e-09 Score=99.31 Aligned_cols=130 Identities=16% Similarity=0.161 Sum_probs=93.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+..++....++.+ +.+.+++.+|+.............++.............. .........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---------------RVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS---------------CEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc---------------ccccccccchh
Confidence 4456677777665 5789999999999999999999988753211100000000 00123344566
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
.+...++.++.....|+++|||.||.+||+.||+||||+...+..++++|+++. .++..+++.|..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 677788888888999999999999999999999999996566667788898875 568888876654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.86 E-value=1.3e-09 Score=108.09 Aligned_cols=66 Identities=27% Similarity=0.306 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCC-ChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP-GLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~-~~~~i~~~i~ 638 (675)
.|...++.+.+. ...|+++|||.||.+||+.|++|++|+++.+.+++.||+++..+ +-.++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 566666666542 45799999999999999999999999999999999999999755 4445666654
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.86 E-value=1.4e-09 Score=107.27 Aligned_cols=70 Identities=27% Similarity=0.323 Sum_probs=60.5
Q ss_pred cCHH--HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 569 VFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 569 ~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
++|. .|...++.+.+. ...|+++|||.||.+||+.|++||+|+++++.+++.||+++.+++-++++++|+
T Consensus 184 i~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 184 IVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4453 688888777553 346899999999999999999999999999999999999999999999998875
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.72 E-value=2e-08 Score=96.69 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=39.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 534 (675)
.+...+.++++|++|+++|++++++||++...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 45556789999999999999999999999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.56 E-value=4.4e-08 Score=94.63 Aligned_cols=68 Identities=19% Similarity=0.169 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC-------EEecCCChhHHHHHHH
Q 005830 571 PEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (675)
Q Consensus 571 p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~ 638 (675)
..+|...++.+.+. ...|+++|||.||.+||+.|+.|++|+|+.+.+++.|| ++...++..++.++|+
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 45799888888764 24599999999999999999999999999999998888 6666777888888775
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.39 E-value=4.3e-07 Score=86.20 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=38.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
.+.+.+.++|++|+++|+.++++||++...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46788999999999999999999999999999999999985
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=2.4e-06 Score=74.03 Aligned_cols=122 Identities=20% Similarity=0.281 Sum_probs=87.5
Q ss_pred ccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHH---hcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcH
Q 005830 355 AKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEA---RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (675)
Q Consensus 355 ~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~---~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~ 431 (675)
..+.+.++++.+|+.++..+. ||+++|+++++...... ..........||....+...+. .+| ..+..|++
T Consensus 10 ~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g--~~v~~G~~ 83 (136)
T d2a29a1 10 AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN--RMIRKGSV 83 (136)
T ss_dssp CTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT--EEEEEECH
T ss_pred CCCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC--EEEEecHH
Confidence 468999999999999987776 99999999987432210 1123334455666554433322 256 46678999
Q ss_pred HHHHHhccC-ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCC
Q 005830 432 EQILALCNC-REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPR 495 (675)
Q Consensus 432 e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr 495 (675)
..+.+++.. ....+..+.+.++.+..+|.+++.++... +++|++++.|++|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 877664421 12345677788899999999999999987 9999999999986
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.96 E-value=6.1e-06 Score=77.69 Aligned_cols=62 Identities=10% Similarity=0.177 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.+|...++.|.... .++++||+.||.+||+.|+.|++|++|. .+.+|++.+. +...+..+++
T Consensus 158 ~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~--~~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVA--DYIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcC--CHHHHHHHHH
Confidence 37999999998764 5778999999999999998887775332 2457899984 4555555543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.85 E-value=5.3e-06 Score=77.94 Aligned_cols=124 Identities=16% Similarity=0.123 Sum_probs=87.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+...... .+..... -..+..|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~--~~~~~~~-----------------~~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--MLGGQSL-----------------PEIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTTTS-----------------SSCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccc--ccccccc-----------------ccccccch
Confidence 3579999999999999999999999999999999999998542111 0000000 01122355
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEc--C-C-ccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--A-D-ATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~--~-~-~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+.+.++-....++||||+.+|..+-+.|++ .|.+ | + ..+.....+|+++ +++..++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 5556667777677889999999999999999997 4444 3 1 2234455689998 5677776554
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.84 E-value=1e-05 Score=76.48 Aligned_cols=123 Identities=15% Similarity=0.189 Sum_probs=81.6
Q ss_pred CCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cCH
Q 005830 494 PRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (675)
Q Consensus 494 lr~~~~~~i~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~p 571 (675)
+-||+.+.++.|++.| +++.++|+.....+....+..|+...... ...+.+ +..+ -.|
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~--i~~~~~------------------~~~~k~~p 151 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFADD------------------ALDRNELP 151 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTTT------------------CSSGGGHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc--cccccc------------------cccccchh
Confidence 3589999999999987 89999999999999999999998643211 000000 0000 112
Q ss_pred HHHHHHHHHHHh---CCCEEEEECCCccCHHHHHhCCc---cEEcCCcc--HHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKADI---GIAVADAT--DAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~---~~~~v~~iGDg~ND~~al~~A~v---gia~~~~~--~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.--...++.+.. ....++||||+.+|+.|-+.|++ +|+.|... +..+..||+++ ++++.+.+.|.
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 222333444432 24679999999999999999995 44445322 23444689998 66777777664
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.78 E-value=4e-05 Score=73.66 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=88.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++.|+++.++||.+...+..+-+..|+.....+ ..+.+.+. ...+..|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d-~~~~~d~~-----------------~~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD-FLVTPDDV-----------------PAGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-CCBCGGGS-----------------SCCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccc-cccccccc-----------------cccccChH
Confidence 5789999999999999999999999999999999999988643211 11111110 02233466
Q ss_pred HHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCc-cEEcCCcc------H---------------------HHHhccCE
Q 005830 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADI-GIAVADAT------D---------------------AARSASDI 623 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~v-gia~~~~~------~---------------------~a~~~ad~ 623 (675)
.=...++.+... ...|+||||+.+|+.+-+.|++ .|++..|. + ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCE
Confidence 666677777653 4679999999999999999997 34443221 0 11123899
Q ss_pred EecCCChhHHHHHHH
Q 005830 624 VLTEPGLSVIISAVL 638 (675)
Q Consensus 624 vl~~~~~~~i~~~i~ 638 (675)
++ +++..+..+|+
T Consensus 241 vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 241 TI--ETMQELESVME 253 (257)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred EE--CCHHHHHHHHH
Confidence 99 66888887775
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.71 E-value=1.3e-06 Score=83.12 Aligned_cols=53 Identities=19% Similarity=0.301 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhC-CCEEEEECC----CccCHHHHHhCC-ccEEcCCccHHHHhccCEEe
Q 005830 573 HKYEIVKRLQER-KHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVL 625 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGD----g~ND~~al~~A~-vgia~~~~~~~a~~~ad~vl 625 (675)
.|...++.|.+. ...|+++|| |.||.+||++|+ .|+||+|+.|.++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 688888888664 568999999 569999999997 69999999999999998875
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=3.1e-05 Score=72.32 Aligned_cols=120 Identities=15% Similarity=0.173 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+..... ..+.+... -.++-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~--~i~~~~~~-----------------~~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--ALASAEKL-----------------PYSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEECTTS-----------------SCCTTSTH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccc--cccccccc-----------------ccchhhHH
Confidence 346999999999999999999999999999999999999953211 11111000 01233345
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcC--C-ccHHHHhccCEEecCCChhHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVA--D-ATDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~--~-~~~~a~~~ad~vl~~~~~~~i 633 (675)
-=..+++.+.-....++|+||+.+|+.|-+.|++.. ++. . ..+.....||+++ +++..+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhhC
Confidence 556677777766788999999999999999999743 332 1 2222335689987 446543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.52 E-value=3.3e-05 Score=75.33 Aligned_cols=129 Identities=10% Similarity=0.040 Sum_probs=77.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC---CCCC-CccCCccccccCcccHHHHhhhcCEEEe
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM---YPSS-SLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
++|+|+++.++.|++.|+++.++||.-......+++++|+.... ..+. .+.++.......+. -
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~-------------~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGE-------------L 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSS-------------C
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCC-------------c
Confidence 58999999999999999999999999999999999999986431 1000 00000000000000 0
Q ss_pred cCHHHHHHHH----HHHH--hCCCEEEEECCCccCHHHHHh---CCccEEcC--Ccc-----HHHHhccCEEecCCChhH
Q 005830 569 VFPEHKYEIV----KRLQ--ERKHICGMTGDGVNDAPALKK---ADIGIAVA--DAT-----DAARSASDIVLTEPGLSV 632 (675)
Q Consensus 569 ~~p~~K~~iv----~~l~--~~~~~v~~iGDg~ND~~al~~---A~vgia~~--~~~-----~~a~~~ad~vl~~~~~~~ 632 (675)
.....|...+ ..++ .....|.++|||.||..|.+. ++..+++| +.. +.-.++-|+|+.++.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 0112222211 2222 234679999999999999874 34444443 221 223357799988764333
Q ss_pred HH
Q 005830 633 II 634 (675)
Q Consensus 633 i~ 634 (675)
++
T Consensus 282 v~ 283 (291)
T d2bdua1 282 VV 283 (291)
T ss_dssp HH
T ss_pred HH
Confidence 33
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.41 E-value=6.5e-05 Score=69.57 Aligned_cols=121 Identities=9% Similarity=-0.007 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.++..+ ++.++|+.+...+..+.+.+|+....... +... -..+..|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v--~~~~-------------------~~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGI--YGSS-------------------PEAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEE--EEEC-------------------SSCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccccc--cccc-------------------cccccccc
Confidence 45789999999999775 88999999999999999999986421100 0000 01223355
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEc--CC--ccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--AD--ATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~--~~--~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
-...+++.+.-....++||||+.+|..|-++|++ .|++ |. ..+.....+|+++ +++..+...+
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~l 209 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAYF 209 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHHT
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHHh
Confidence 5555556655556789999999999999999998 4554 42 2233334589998 5577776543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.39 E-value=0.00045 Score=62.38 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=80.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHH---------------HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAI---------------GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDE 558 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~---------------a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (675)
+-|++.++++.|+++|++++++|..+... ........|+...... +.....+ ....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~cp~~p~-----~~~~- 98 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIY---YCPHHPQ-----GSVE- 98 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEE---EECCBTT-----CSSG-
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccccee---ecccccc-----cccc-
Confidence 45899999999999999999999876311 1111222232110000 0000000 0000
Q ss_pred HhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc--EEc--CC-ccHHHHhccCEEecCCChhHH
Q 005830 559 LIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG--IAV--AD-ATDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 559 ~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg--ia~--~~-~~~~a~~~ad~vl~~~~~~~i 633 (675)
.......+.+-.|.--..+++.+.-....++||||..+|..|-++|+++ +.+ |. ..+.....||+++ +++..+
T Consensus 99 ~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 99 EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred cccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 0000011234456666777777776677899999999999999999995 333 32 2345566799998 678888
Q ss_pred HHHHH
Q 005830 634 ISAVL 638 (675)
Q Consensus 634 ~~~i~ 638 (675)
++.|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88775
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.35 E-value=0.00022 Score=66.93 Aligned_cols=124 Identities=17% Similarity=0.129 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|+ .|++++++|+..........+.+|+...... .+.. +.. -..+-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~--i~~s------------~~~-----~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDS--ITTS------------EEA-----GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSE--EEEH------------HHH-----TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccc--cccc------------ccc-----cccchhhH
Confidence 46799999999997 5799999999888889999999998532110 0000 000 01222344
Q ss_pred HHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCccEE-c--CCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIA-V--ADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgia-~--~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
-=..+++.+.-....++||||. .+|+.+-+.|++-.. + +.........+|+++ .+++.++++|+
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 4455566665566789999998 689999999998433 3 223334455789998 56888888876
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.00056 Score=64.39 Aligned_cols=116 Identities=15% Similarity=0.040 Sum_probs=80.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
-.+.|++.+.+++|++.|+++.++|+............+|+.......... ... ....+-.|
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~-~d~-----------------~~~~KP~p 187 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGH-FDT-----------------KIGHKVES 187 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEE-ECG-----------------GGCCTTCH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhccee-ecc-----------------ccccCCCc
Confidence 356899999999999999999999999998888888888874321110000 000 01223445
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc----CCc-cHHHHhccCEEe
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV----ADA-TDAARSASDIVL 625 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~----~~~-~~~a~~~ad~vl 625 (675)
+-=....+.+.-....++||||..+|+.+-++|++-..+ |+. .......++.++
T Consensus 188 ~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i 246 (253)
T d1zs9a1 188 ESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246 (253)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred HHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE
Confidence 555667777776778899999999999999999995444 222 222334567776
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.04 E-value=7.6e-05 Score=69.04 Aligned_cols=120 Identities=10% Similarity=0.055 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++ ++++.++|+.....+..+.+..|+...... ...... .-..+-.|+
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~--i~~~~~-----------------~~~~KP~p~ 141 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAV--TISADD-----------------TPKRKPDPL 141 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEE--EECGGG-----------------SSCCTTSSH
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccccc--cccccc-----------------cccchhhhh
Confidence 356899999999975 799999999999999999998887532100 000000 001122355
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc---CCccHHHHhccCEEecCCChhHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~---~~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
--..+++.++-....++||||+.+|+.+-+.|++.... |..+....+.+|+++ +++..|.
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 55666666655557899999999999999999997554 333444456788887 4565554
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.94 E-value=0.00051 Score=62.93 Aligned_cols=119 Identities=15% Similarity=0.085 Sum_probs=79.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++.|+++.++|+... .+..+-+..|+...... +.+.+. ....+-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~---i~~s~~----------------~~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTE---ILTSQS----------------GFVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEE---EECGGG----------------CCCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccccc---cccccc----------------ccccchhHH
Confidence 3579999999999999999999998654 45667788998642100 000000 011223455
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCCccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+++.+.-....|+||||+.+|..+-+.|++. |++..+.. .+|..+ +++..+..++
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRIF 201 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHHh
Confidence 56667777776677899999999999999999984 44544431 355554 3455555443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.85 E-value=0.00088 Score=59.20 Aligned_cols=88 Identities=10% Similarity=0.021 Sum_probs=64.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--c
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--V 569 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~ 569 (675)
++.|++.++++.|++.|+++.++|+-+ ...+...-+..++..... .+... -
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--------------------------eeecccCC
Confidence 478999999999999999999999655 455666667777642110 01222 2
Q ss_pred CHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc
Q 005830 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v 606 (675)
.|+.-..+.+.+.-....++|+||..+|+.+-++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 2444456666666667789999999999999999988
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.80 E-value=0.0015 Score=53.63 Aligned_cols=104 Identities=17% Similarity=0.216 Sum_probs=71.3
Q ss_pred CCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHH
Q 005830 357 GVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILA 436 (675)
Q Consensus 357 ~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~ 436 (675)
+.+.+++|.+++..+..+. ||+++|+++++.+...........+..|-.. +. |+ .+.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~G------i~-----g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEG------VV-----AD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEETTTE------EE-----ET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCC-CchHHHHHHHHHHhcCCCCccccceeeccce------EE-----eE--EEEECcHHHHHh
Confidence 3478899999998887777 9999999998754322112223333333221 11 11 145699999876
Q ss_pred hccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecc
Q 005830 437 LCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL 490 (675)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~ 490 (675)
..- ..++.+...++.+..+|..+++++... .++|++++
T Consensus 75 ~~~---~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cCC---CCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 422 234567778889999999999999987 89999876
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.66 E-value=0.0024 Score=58.12 Aligned_cols=143 Identities=15% Similarity=0.143 Sum_probs=92.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccC-Cc----cc----------cccCcccHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLG-QD----KD----------ASIAALPVDE 558 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~----~~----------~~~~~~~~~~ 558 (675)
+-||+.++++.+++. ...+++|---..-..++|+.+|+..+......-.. -. ++ .+.+.+++.+
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 348999999999887 78888888888999999999999633111100000 00 00 0001111111
Q ss_pred HhhhcCEEEec------------CHHHHHHHHHHHHhC--CCEEEEECCCccCHHHHHhCCc--cEEcC-CccHHHHhcc
Q 005830 559 LIEKADGFAGV------------FPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKKADI--GIAVA-DATDAARSAS 621 (675)
Q Consensus 559 ~~~~~~v~~r~------------~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~v--gia~~-~~~~~a~~~a 621 (675)
.+. .+|.|+ -...|..+++..-.. -...+++||++.|+.||+.|.= |++++ ||.+-+...|
T Consensus 161 ~~d--~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~eA 238 (308)
T d1y8aa1 161 KLD--ELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHA 238 (308)
T ss_dssp HHH--HHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTC
T ss_pred HHH--HHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccccccc
Confidence 110 012221 124566666544332 1235889999999999998754 88888 8999999999
Q ss_pred CEEecCCChhHHHHHHHH
Q 005830 622 DIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 622 d~vl~~~~~~~i~~~i~~ 639 (675)
|+.+.+++...+..++.+
T Consensus 239 ~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 239 DVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp SEEEECSSTHHHHHHHHH
T ss_pred ceEEeccchhHHHHHHHH
Confidence 999999998888877764
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0022 Score=60.35 Aligned_cols=124 Identities=11% Similarity=0.098 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++ |++++++|+.........-+.+|+...... .+...+. -..+-.|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--i~~s~~~-----------------~~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA--IVIGGEQ-----------------KEEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE--EEEGGGS-----------------SSCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccc--ccccccc-----------------ccchhhhh
Confidence 367999999999985 899999999998888999999998543110 0100000 01223344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCcc-EEcC--Cc--cHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAVA--DA--TDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg-ia~~--~~--~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
-=..+++.+.-....++||||.. +|+.+-+.|++. +..- .+ .......+|+++ +++..+.++|+
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 33555666655566799999995 899999999996 4431 11 222233578888 56888887775
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.33 E-value=0.0025 Score=57.28 Aligned_cols=108 Identities=12% Similarity=0.018 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+-+... ....+.+|+..... ..+.+... -..+-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~fd--~i~~~~~~-----------------~~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAYFT--EVVTSSSG-----------------FKRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGGEE--EEECGGGC-----------------CCCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccccccc--cccccccc-----------------cccCCCHH
Confidence 467999999999999999999999876554 45677888753210 00000000 01122244
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad 622 (675)
--..+.+.+. ...+++|||..+|..+-++|++-...-++.+..++..|
T Consensus 139 ~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d 186 (187)
T d2fi1a1 139 SMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 186 (187)
T ss_dssp HHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcC
Confidence 4444555544 34589999999999999999986443344555665555
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.11 E-value=0.002 Score=55.49 Aligned_cols=90 Identities=11% Similarity=-0.020 Sum_probs=60.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH----HHHHHH-------hCCCCCCCCCCCccCCccccccCcccHHH
Q 005830 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG----KETGRR-------LGMGTNMYPSSSLLGQDKDASIAALPVDE 558 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a----~~ia~~-------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (675)
.++++.|++.+.++.|+++|++++++||.+.... ..+... .+...
T Consensus 33 ~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~------------------------ 88 (149)
T d1ltqa1 33 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL------------------------ 88 (149)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC------------------------
T ss_pred ccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE------------------------
Confidence 3578899999999999999999999999873211 111110 01100
Q ss_pred HhhhcCEEE------ecCHHHHHHHHHHHHhCC-CEEEEECCCccCHHHHHhCCcc
Q 005830 559 LIEKADGFA------GVFPEHKYEIVKRLQERK-HICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 559 ~~~~~~v~~------r~~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~vg 607 (675)
...+. |-.+.-|..+.+.+...+ .+++|+||...|+.|.+++++=
T Consensus 89 ----~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 89 ----VMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp ----SEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ----EEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 00111 223456777777776654 4568899999999999999884
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.08 E-value=0.0035 Score=57.59 Aligned_cols=123 Identities=8% Similarity=0.026 Sum_probs=85.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
.+.+++.++++.+++.|+++.++|+-.........+..++...... .+...+ ....+-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~--~~~s~~-----------------~~~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSVDP-----------------VQVYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEESGG-----------------GTCCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccc--eeeeee-----------------eeccccHHH
Confidence 3468999999999999999999999998888888888777532100 000000 001233455
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc-C---CccHHHHhccCEEecCCChhHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~-~---~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
-=..+++.+.-....++||||..+|+.+-++|++-... . ...+.....+|+++ +++..+.++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~l 219 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVEL 219 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHhh
Confidence 55666777766677899999999999999999986443 2 22222334589988 568877653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.62 E-value=0.0072 Score=54.65 Aligned_cols=89 Identities=21% Similarity=0.278 Sum_probs=63.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
+.|++.+.++.+++.|++|+.+||+. ..|+..+-+.+|+........ ++.+-
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~v------------------------ll~~~ 142 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPV------------------------IFAGD 142 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCC------------------------EECCC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccce------------------------EeeCC
Confidence 35799999999999999999999975 366677777789864322111 12211
Q ss_pred C--HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEc
Q 005830 570 F--PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (675)
Q Consensus 570 ~--p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~ 610 (675)
. ...|...|+. ..+++++||..+|..+-++|++ +|.+
T Consensus 143 ~~~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 143 KPGQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CTTCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCCchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 1 1234555543 3589999999999999999996 6766
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.56 E-value=0.0094 Score=54.68 Aligned_cols=125 Identities=9% Similarity=0.044 Sum_probs=79.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
.+.+++.+.+++|+. +..++|+-....+...-+.+|+....... ........ .-.++-.|+
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~~---------------~~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPH-IYSAKDLG---------------ADRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTC-EEEHHHHC---------------TTCCTTSSH
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhccccccccccee-eccccccc---------------ccccccCHH
Confidence 357888888887754 55789999999999999999986432110 00000000 001222344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCcc--------HHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADAT--------DAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~~--------~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.=....+.+.-....++||||+.+|+.+-+.|++ .|++..+. +....-||+++ +++..+..+|.
T Consensus 146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 4455666666667789999999999999999997 34453221 11223489999 56777776663
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.52 E-value=0.012 Score=53.68 Aligned_cols=137 Identities=18% Similarity=0.068 Sum_probs=71.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH--------HH-------HHHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQL--------AI-------GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~--------~~-------a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
.+-|++.++|+.|+++|+++.++|.-.. .. ....-+..|+..................
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~------- 120 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPL------- 120 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTT-------
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccccc-------
Confidence 3579999999999999999999996321 11 1122223333110000000000000000
Q ss_pred HHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCccHHHHhccCEEec-CCChhHHHH
Q 005830 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLT-EPGLSVIIS 635 (675)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~~~~a~~~ad~vl~-~~~~~~i~~ 635 (675)
......+..-.|.--....+.+.-....++||||..+|..|-+.|++ +|.+..|.... ..+.... -.++..+.+
T Consensus 121 --~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~--~~~~~~~~~~~~~e~~d 196 (209)
T d2o2xa1 121 --AIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV--QPGFAIRPLRDSSELGD 196 (209)
T ss_dssp --CCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE--ETTEEEEEESSHHHHHH
T ss_pred --cccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcc--cCCccccCccchhHHHH
Confidence 00000011234555556666666566789999999999999999999 45553322111 2233322 144556666
Q ss_pred HHHHH
Q 005830 636 AVLTS 640 (675)
Q Consensus 636 ~i~~g 640 (675)
++...
T Consensus 197 ll~~v 201 (209)
T d2o2xa1 197 LLAAI 201 (209)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.45 E-value=0.0035 Score=59.36 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=29.1
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
+++.++|+.|+++|++++++|+....+...+++.+
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999987766666665543
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.33 E-value=0.0066 Score=55.75 Aligned_cols=112 Identities=7% Similarity=-0.006 Sum_probs=73.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++-|++.+.++.|++.|+++.++|+... +....+..|+...... .+.+.. ....+-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~--i~~~~~-----------------~~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDA--IADPAE-----------------VAASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSE--ECCTTT-----------------SSSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccc--cccccc-----------------ccccccCh
Confidence 44678999999999999999999998754 4667778887542111 000000 01222334
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCccHHHHhccCEEec
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLT 626 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~~~~a~~~ad~vl~ 626 (675)
+-=..+.+.+.-....++||||..+|+.+-+.|++ .|+++.+ .....++.++.
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~--~~~~~~~~~~~ 202 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP--EDLGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH--HHHCSSSEEES
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECCh--hhcccccEEcC
Confidence 43344555555556779999999999999999997 4555433 23335666653
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.69 E-value=0.012 Score=53.68 Aligned_cols=106 Identities=9% Similarity=0.027 Sum_probs=69.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
.+++++.+.++.|+++|+++.++|+-. ...........|+..... .+.+. +. .-..+
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd---~i~~s-----------~~-----~~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFD---FLIES-----------CQ-----VGMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCS---EEEEH-----------HH-----HSCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhc---eeeeh-----------hh-----ccCCC
Confidence 357899999999999999999999632 233344444555432100 00000 00 00123
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCccHHH
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAA 617 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~~~~a 617 (675)
-.|+--...++.++-....++||||..+|+.+-++|++ +|.+.++.+..
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~ 207 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASAL 207 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHH
Confidence 45676777788887778889999999999999999998 56555554443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.53 E-value=0.059 Score=49.66 Aligned_cols=123 Identities=14% Similarity=0.104 Sum_probs=81.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+++++|+ ++.+.++|+.+...+...-+..|+..... ..+.+.+. -..+-.|+
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd--~v~~s~~~-----------------~~~KP~p~ 151 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAK-----------------RVFKPHPD 151 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGG-----------------TCCTTSHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccc--cccccccc-----------------cccCccHH
Confidence 45689999999886 67889999999888888888888753211 00000000 02233455
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcC-CccH-------------------------HHHhccCEEe
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA-DATD-------------------------AARSASDIVL 625 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~-~~~~-------------------------~a~~~ad~vl 625 (675)
-=..+++.+.-....|+||||..+|+.+-++|++- |.+. .+.+ ......|+++
T Consensus 152 ~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i 231 (245)
T d1qq5a_ 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (245)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE
Confidence 44566777766667899999999999999999873 3332 1111 0012479998
Q ss_pred cCCChhHHHHHHH
Q 005830 626 TEPGLSVIISAVL 638 (675)
Q Consensus 626 ~~~~~~~i~~~i~ 638 (675)
+++..++.+|+
T Consensus 232 --~~l~el~~lv~ 242 (245)
T d1qq5a_ 232 --PALGDLPRLVR 242 (245)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 67888888775
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.40 E-value=0.059 Score=50.59 Aligned_cols=65 Identities=26% Similarity=0.294 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCc-cEEcCCc---cHHHHh---ccCEEecCCChhHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA---TDAARS---ASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~v-gia~~~~---~~~a~~---~ad~vl~~~~~~~i~~~i 637 (675)
|.--..+.+.+.-....++||||.. +|+.+-++|++ +|.+..| .+.... .+|+++ +++..+.++|
T Consensus 188 p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 188 PLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 3444556666665677899999995 69999999998 6665322 222222 259999 6798888776
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=93.66 E-value=0.014 Score=50.80 Aligned_cols=103 Identities=12% Similarity=-0.005 Sum_probs=55.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC--------HHHH-------HHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ--------LAIG-------KETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~--------~~~a-------~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
.+-|++.++++.|++.|++++++|..+ .... ...-...|+..............
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~----------- 98 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPAD----------- 98 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGG-----------
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccc-----------
Confidence 346899999999999999999999753 1111 11122223211000000000000
Q ss_pred HHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcC
Q 005830 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVA 611 (675)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~ 611 (675)
..-+..-.|.-=.++++.+.-....++||||...|..|-+.|++- |.++
T Consensus 99 -----~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~ 148 (161)
T d2fpwa1 99 -----ECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 148 (161)
T ss_dssp -----CCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred -----cccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEEC
Confidence 000112234333445555555566799999999999999999994 4444
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=93.52 E-value=0.03 Score=52.52 Aligned_cols=59 Identities=15% Similarity=0.075 Sum_probs=38.3
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCc-cEEc--CCccHHHH----hccCEEec
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAV--ADATDAAR----SASDIVLT 626 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~v-gia~--~~~~~~a~----~~ad~vl~ 626 (675)
+-+|+--..+++.+.-....++||||+. +|+.+-++|++ +|.+ |..+.... ..+|+++.
T Consensus 176 KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~ 242 (250)
T d2c4na1 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred cchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEEC
Confidence 3345544556666665667899999996 59999999997 5554 32222221 23488883
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.13 E-value=0.067 Score=50.03 Aligned_cols=59 Identities=25% Similarity=0.256 Sum_probs=41.2
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCcc-CHHHHHhCCc-cEEcCCc---cHHHHhc---cCEEec
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGVN-DAPALKKADI-GIAVADA---TDAARSA---SDIVLT 626 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~N-D~~al~~A~v-gia~~~~---~~~a~~~---ad~vl~ 626 (675)
+-+|+--..+.+.+.-....++||||..+ |+.+-++|++ +|.+..| .+..... .|+++.
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~ 246 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLS 246 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEES
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEEC
Confidence 44466666777777767778999999976 9999999999 7776322 2222222 389883
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.92 E-value=0.0085 Score=54.64 Aligned_cols=101 Identities=10% Similarity=0.003 Sum_probs=62.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHH----HHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGK----ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~----~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
+.+++.+.++.|++.|++++++|+....... ..-...++.... ...+.+ +. .-..+-
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f--d~i~~s------------~~-----~~~~KP 160 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF--DFLIES------------CQ-----VGMVKP 160 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS--SEEEEH------------HH-----HTCCTT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc--cEEEec------------cc-----cccchh
Confidence 5789999999999999999999975432221 111222221100 000000 00 001123
Q ss_pred CHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCc
Q 005830 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADA 613 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~ 613 (675)
.|+-=..+++.+.-....++||||...|+.+-++|++ +|.+..+
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 4555566667776666789999999999999999999 6666544
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.61 E-value=0.011 Score=54.63 Aligned_cols=48 Identities=21% Similarity=0.313 Sum_probs=32.6
Q ss_pred HHHHHHHHHHh-CCCEEEEECC----CccCHHHHHhCC-ccEEcCCccHHHHhcc
Q 005830 573 HKYEIVKRLQE-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSAS 621 (675)
Q Consensus 573 ~K~~iv~~l~~-~~~~v~~iGD----g~ND~~al~~A~-vgia~~~~~~~a~~~a 621 (675)
+|...++.|.. ....|+++|| |.||.+||++|+ .|+++++..+ .++.+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~-~~~~~ 238 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED-TRRIC 238 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH-HHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH-HHHHH
Confidence 45555555543 3568999999 889999999997 6888876544 44343
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=86.03 E-value=0.081 Score=46.33 Aligned_cols=96 Identities=9% Similarity=0.032 Sum_probs=60.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE------
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA------ 567 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------ 567 (675)
+.+++.+.+..+++.|+++.++|+-+...+...-... ..+..... .+++
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~-----------------------~~l~~~fd--~v~~s~~~~~ 139 (197)
T d2b0ca1 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEY-----------------------PEIRDAAD--HIYLSQDLGM 139 (197)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGC-----------------------HHHHHHCS--EEEEHHHHTC
T ss_pred cCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHc-----------------------ccchhhcc--ceeecccccc
Confidence 5789999999999999999999875432211100000 01111110 1121
Q ss_pred -ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCCcc
Q 005830 568 -GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVADAT 614 (675)
Q Consensus 568 -r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~~~ 614 (675)
.-.|+-=..+.+.+.-....++||||..+|+.+-+.|++ +|.+.+..
T Consensus 140 ~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 140 RKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred cccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 234444455666666566789999999999999999998 66665433
|