Citrus Sinensis ID: 005832

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-----
MFISCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSNFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAGLLRLLAWLRSMA
cccccccccccccccccccccccccEEEEEccccHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHccccEEEEccccccccccEEEEEccEEEcccccccccccccccHHHHHHHHHHcccccEEEEcccEEEEEccccEEEEEcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccEEEEcccEEEEEEEccEEEEEEEccccEEEccEEEEcccHHHHHHHccccccccHHHHHHHHHccccccEEEEEEEccccccccccccEEEEEccccccccccccEEEEEcccccccccccccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHccccccccccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcc
cEEEEcccccccccccccHcccccEEEEEccccHHHEccccHHHHcccHHHHccccccccHccEEEEEccccccccccccccEEccccccccccccccccccEEEcccccccccccEccccccccccccEEEEEEEEEcccccccccccccccccccccEEEEEccHHHHHHHHHHHHcccEEEEEEEcccccccEEEEEcccEEEccccEEEEccccHHHHHHHHHHHHHHcccEEEcccccEEEEEcccccEEEccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHccccHHHHHHHHHccHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccEEEEcccEEEEEEEccEEEEEEEcccEEEEccEEEEcccHHHHHHHHccccccccHHHHHHHHccccccEEEEEEccccccccccccccEEEEcccHHHHcccccEEEEEcccccccccccccccEEEEEEccccHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHccEEEEEEcccHHHHHHHHHccccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcc
mfisccslsipelnftpslinhnsqvLIHQNRSKFTALSNKVqsfgqrdamqlgssskprirncmiqsfehvntlpfsdykfsrmklfkpryeksslfsgdslkssnfngstlrsedlgcgeserNRDFALMAKTVMSVDNLVEiggnegmsrgaddydaIVIGSGIGGLVAATQLAVKGARVLVLEKYvipggssgyyerdgytfdvgssvmfgfsdkgnLNLITQALAAVgcemevipdpttvhfhlpndlsvrVHREYSDFVAELtskfphekegVLAFYGECWKIFNALNSlelksleepiyLFGQFFKRPLECLTLAyylpqnagniarkyikdpqllsfidaECFIVSTINALQTPMINASMVLcdrhfgginypvggvGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNAtrwdtfgkllkgeqlpkEEENFQKLYvkapsflsihmgvkaevlppdtdchhfvleddwnrleepygsiflsiptvldsslapeghhiLHIFTICsiedweglaqkdydAKKELVADEIINRLENklfpglkqsiafreigspkthrrylardqgtygpmprgtpkgllgmpfnttginglycvgdscfpgqGVIAVAFSGVMCAHRVAAdiglekkspvLDAGLLRLLAWLRSMA
MFISCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEhvntlpfsDYKFSRMKLFKPRYeksslfsgdslkssnfngstlrsedlgcgeSERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYvipggssgyyeRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILeqgkavgvrlsdgrEFYAKTiisnatrwdtFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLenklfpglkqsiafreigspkthrrylardqgtygpmprgTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAAdiglekkspvldAGLLRLLAWLRSMA
MFISCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEksslfsgdslkssNFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFgginypvggvggiAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVldagllrllawlrSMA
*FISCCSLSIPELNFTPSLINHNSQVLIHQNR**F*************************IRNCMIQSFEHVNTLPFSDYKFSRMKLFK***************************************FALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSP*THRRYLA**************KGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAGLLRLLAWL****
*F*SCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFG******************MIQSFEHVNTLPFSDYKFS***************************************************************************DAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAGLLRLLAWLR***
MFISCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSNFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAGLLRLLAWLRSMA
MFISCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSNFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLV************DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAGLLRLLAWLRSMA
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MFISCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPRIRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSNFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAGLLRLLAWLRSMA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query675 2.2.26 [Sep-21-2011]
Q8S4R4615 Prolycopene isomerase, ch N/A no 0.897 0.985 0.778 0.0
Q2VEX9615 Prolycopene isomerase, ch N/A no 0.874 0.959 0.765 0.0
Q9M9Y8595 Prolycopene isomerase, ch yes no 0.749 0.850 0.875 0.0
Q52QW3587 Prolycopene isomerase 1, N/A no 0.785 0.902 0.809 0.0
Q52QW2587 Prolycopene isomerase 2, N/A no 0.785 0.902 0.807 0.0
Q5BLE8607 Putative all-trans-retino yes no 0.730 0.812 0.238 3e-24
P22871492 Phytoene desaturase (lyco N/A no 0.691 0.949 0.240 5e-24
P21685492 Phytoene desaturase (lyco yes no 0.690 0.947 0.252 5e-24
P17054524 Phytoene desaturase (neur yes no 0.671 0.864 0.256 5e-21
P54980518 Phytoene desaturase (neur no no 0.703 0.916 0.242 1e-18
>sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum GN=CRTISO PE=1 SV=1 Back     alignment and function desciption
 Score =  965 bits (2495), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/613 (77%), Positives = 523/613 (85%), Gaps = 7/613 (1%)

Query: 68  SFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSN-FNGSTLRSEDLGCGESERN 126
           SF + N+L     K   +   KPRY K      D L   N  +   L     G  +++  
Sbjct: 5   SFMYPNSLLDGTCKTVALGDSKPRYNKQRSSCFDPLIIGNCTDQQQLCGLSWGVDKAKGR 64

Query: 127 RDFALM-AKTVMSVDNLVEIGGN---EGMSRGADDYDAIVIGSGIGGLVAATQLAVKGAR 182
           R   +   K V+ VD  VE  G+   EG   G+  YDAIVIGSGIGGLVAATQLAVKGA+
Sbjct: 65  RGGTVSNLKAVVDVDKRVESYGSSDVEGNESGS--YDAIVIGSGIGGLVAATQLAVKGAK 122

Query: 183 VLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDP 242
           VLVLEKYVIPGGSSG+YERDGY FDVGSSVMFGFSDKGNLNLITQALAAVG ++EVIPDP
Sbjct: 123 VLVLEKYVIPGGSSGFYERDGYKFDVGSSVMFGFSDKGNLNLITQALAAVGRKLEVIPDP 182

Query: 243 TTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLE 302
           TTVHFHLPNDLSVR+HREY DF+ EL SKFPHEKEG++ FY ECWKIFN+LNSLELKSLE
Sbjct: 183 TTVHFHLPNDLSVRIHREYDDFIEELVSKFPHEKEGIIKFYSECWKIFNSLNSLELKSLE 242

Query: 303 EPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTP 362
           EPIYLFGQFFK+PLECLTLAYYLPQNAG+IARKYI+DP LLSFIDAECFIVST+NALQTP
Sbjct: 243 EPIYLFGQFFKKPLECLTLAYYLPQNAGSIARKYIRDPGLLSFIDAECFIVSTVNALQTP 302

Query: 363 MINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGV 422
           MINASMVLCDRHFGGINYPVGGVG IAKSLAKGL D GS+ILY+ANVT +IL+ GKAVGV
Sbjct: 303 MINASMVLCDRHFGGINYPVGGVGEIAKSLAKGLDDHGSQILYRANVTSIILDNGKAVGV 362

Query: 423 RLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEV 482
           +LSDGR+FYAKTI+SNATRWDTFGKLLK E LPKEEENFQK YVKAPSFLSIHMGVKA+V
Sbjct: 363 KLSDGRKFYAKTIVSNATRWDTFGKLLKAENLPKEEENFQKAYVKAPSFLSIHMGVKADV 422

Query: 483 LPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGL 542
           LPPDTDCHHFVLEDDW  LE+PYGSIFLSIPTVLDSSLAPEGHHILHIFT  SIEDWEGL
Sbjct: 423 LPPDTDCHHFVLEDDWTNLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWEGL 482

Query: 543 AQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRG 602
           + KDY+AKKE+VA+ II+RLE  LFPGLK SI F+E+G+PKTHRRYLARD GTYGPMPRG
Sbjct: 483 SPKDYEAKKEVVAERIISRLEKTLFPGLKSSILFKEVGTPKTHRRYLARDSGTYGPMPRG 542

Query: 603 TPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDA 662
           TPKGLLGMPFNTT I+GLYCVGDSCFPGQGVIAVAFSGVMCAHRVAAD+G EKKS VLD+
Sbjct: 543 TPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGFEKKSDVLDS 602

Query: 663 GLLRLLAWLRSMA 675
            LLRLL WLR++A
Sbjct: 603 ALLRLLGWLRTLA 615
Carotene cis-trans-isomerase that converts 7,9,9'-tri-cis-neurosporene to 9'-cis-neurosporene and 7,9,9',7'-tetra-cis-lycopene (also known as prolycopene) into all-trans-lycopene. Isomerization requires redox-active components, suggesting that isomerization is achieved by a reversible redox reaction acting at specific double bonds. Isomerizes adjacent cis-double bonds at C7 and C9 pairwise into the trans-configuration, but is incapable of isomerizing single cis-double bonds at C9 and C9'.
Solanum lycopersicum (taxid: 4081)
EC: 5EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 3
>sp|Q2VEX9|CRTSO_DAUCA Prolycopene isomerase, chloroplastic OS=Daucus carota GN=CRTISO PE=2 SV=1 Back     alignment and function description
>sp|Q9M9Y8|CRTSO_ARATH Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana GN=CRTISO PE=2 SV=2 Back     alignment and function description
>sp|Q52QW3|CRTS1_ONCHC Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar GN=CRTISO1 PE=2 SV=1 Back     alignment and function description
>sp|Q52QW2|CRTS2_ONCHC Prolycopene isomerase 2, chloroplastic OS=Oncidium hybrid cultivar GN=CRTISO2 PE=2 SV=1 Back     alignment and function description
>sp|Q5BLE8|RETST_DANRE Putative all-trans-retinol 13,14-reductase OS=Danio rerio GN=retsat PE=2 SV=1 Back     alignment and function description
>sp|P22871|CRTI_ESCVU Phytoene desaturase (lycopene-forming) OS=Escherichia vulneris GN=crtI PE=3 SV=1 Back     alignment and function description
>sp|P21685|CRTI_PANAN Phytoene desaturase (lycopene-forming) OS=Pantoea ananas GN=crtI PE=1 SV=1 Back     alignment and function description
>sp|P17054|CRTI_RHOCB Phytoene desaturase (neurosporene-forming) OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=crtI PE=1 SV=1 Back     alignment and function description
>sp|P54980|CRTI_RHOS4 Phytoene desaturase (neurosporene-forming) OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=crtI PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query675
224139966613 predicted protein [Populus trichocarpa] 0.893 0.983 0.802 0.0
225439332641 PREDICTED: prolycopene isomerase, chloro 0.899 0.946 0.786 0.0
255566223617 Carotenoid isomerase, chloroplast precur 0.863 0.944 0.798 0.0
224088134606 predicted protein [Populus trichocarpa] 0.871 0.970 0.793 0.0
262036868602 carotenoid isomerase [Ipomoea sp. Kenyan 0.881 0.988 0.782 0.0
449437510666 PREDICTED: prolycopene isomerase, chloro 0.850 0.861 0.804 0.0
449501117666 PREDICTED: LOW QUALITY PROTEIN: prolycop 0.850 0.861 0.802 0.0
87299427641 carotenoid isomerase [Chrysanthemum x mo 0.805 0.848 0.843 0.0
356500543608 PREDICTED: prolycopene isomerase, chloro 0.767 0.851 0.874 0.0
75159637615 RecName: Full=Prolycopene isomerase, chl 0.897 0.985 0.778 0.0
>gi|224139966|ref|XP_002323362.1| predicted protein [Populus trichocarpa] gi|222867992|gb|EEF05123.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1029 bits (2661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/607 (80%), Positives = 546/607 (89%), Gaps = 4/607 (0%)

Query: 73  NTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSNFNG----STLRSEDLGCGESERNRD 128
           N+L F  +   ++   K R +K  + S + +++S  +G      ++ +    G+ + N+D
Sbjct: 7   NSLFFGQFNTVQLGSSKSRSQKHRILSIEPVRTSVLDGYIVPRNIKGKIDNLGKVKLNKD 66

Query: 129 FALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEK 188
           F L +K+V++VD  V++ GN G+ R   +YDAIVIGSGIGGLVAATQLAVKGA+VLVLEK
Sbjct: 67  FVLRSKSVLTVDKEVDVDGNGGLGRERSNYDAIVIGSGIGGLVAATQLAVKGAKVLVLEK 126

Query: 189 YVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFH 248
           YVIPGGSSGYYERDG+TFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFH
Sbjct: 127 YVIPGGSSGYYERDGFTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFH 186

Query: 249 LPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLF 308
           LPNDLSV+VHREY DF++EL +KFPHEK+G+L FYGECWKIFNALNSLELKSLEEPIYLF
Sbjct: 187 LPNDLSVQVHREYIDFISELAAKFPHEKDGILKFYGECWKIFNALNSLELKSLEEPIYLF 246

Query: 309 GQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASM 368
           GQFF++PLECLTLAYYLPQNAG+IARKYIKDPQLLSFIDAECFIVST+NALQTPMINA+M
Sbjct: 247 GQFFQKPLECLTLAYYLPQNAGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINAAM 306

Query: 369 VLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR 428
           VLCDRHFGGINYPVGGVGGIAKSL+KGL D+GSEILY+ANVT +ILE GKAVGVRLSDGR
Sbjct: 307 VLCDRHFGGINYPVGGVGGIAKSLSKGLVDQGSEILYRANVTNIILEHGKAVGVRLSDGR 366

Query: 429 EFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTD 488
           EF+ KTIISNATRWDTFGKLLKGE LPKEEENFQK+YVKAPSFLSIHMGVKAEVLPPDTD
Sbjct: 367 EFFGKTIISNATRWDTFGKLLKGETLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTD 426

Query: 489 CHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYD 548
           CHHFVLEDDW RLEEPYGSIFLSIPT+LDSSLAPEGHHILHIFT  SIEDWEGL+ KDY+
Sbjct: 427 CHHFVLEDDWARLEEPYGSIFLSIPTILDSSLAPEGHHILHIFTTSSIEDWEGLSTKDYE 486

Query: 549 AKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLL 608
           AKK++ ADEII+RLE KLFPG++ SIAF E+GSPKTHRRYLARD+GTYGPMPR TPKGLL
Sbjct: 487 AKKKVAADEIISRLEKKLFPGIRSSIAFMEVGSPKTHRRYLARDKGTYGPMPRRTPKGLL 546

Query: 609 GMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAGLLRLL 668
           GMPFNTT ++GLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIG+EKKSPVLDA LLRLL
Sbjct: 547 GMPFNTTAVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGIEKKSPVLDAALLRLL 606

Query: 669 AWLRSMA 675
            WLR++A
Sbjct: 607 GWLRTLA 613

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225439332|ref|XP_002269554.1| PREDICTED: prolycopene isomerase, chloroplastic-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255566223|ref|XP_002524099.1| Carotenoid isomerase, chloroplast precursor, putative [Ricinus communis] gi|223536667|gb|EEF38309.1| Carotenoid isomerase, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224088134|ref|XP_002308337.1| predicted protein [Populus trichocarpa] gi|222854313|gb|EEE91860.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|262036868|dbj|BAI47575.1| carotenoid isomerase [Ipomoea sp. Kenyan] Back     alignment and taxonomy information
>gi|449437510|ref|XP_004136535.1| PREDICTED: prolycopene isomerase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449501117|ref|XP_004161282.1| PREDICTED: LOW QUALITY PROTEIN: prolycopene isomerase, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|87299427|dbj|BAE79546.1| carotenoid isomerase [Chrysanthemum x morifolium] Back     alignment and taxonomy information
>gi|356500543|ref|XP_003519091.1| PREDICTED: prolycopene isomerase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|75159637|sp|Q8S4R4.1|CRTSO_SOLLC RecName: Full=Prolycopene isomerase, chloroplastic; Short=CrtISO; AltName: Full=Carotenoid isomerase; AltName: Full=Protein tangerine; Flags: Precursor gi|19550437|gb|AAL91366.1|AF416727_1 carotenoid isomerase [Solanum lycopersicum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query675
TAIR|locus:2033055595 CRTISO "carotenoid isomerase" 0.777 0.882 0.829 1.2e-237
UNIPROTKB|Q0IS25602 Os11g0572700 "Os11g0572700 pro 0.493 0.553 0.804 2.3e-207
UNIPROTKB|A8J9E9568 CHLREDRAFT_196597 "Carotenoid 0.731 0.869 0.566 1.8e-156
UNIPROTKB|Q10AT7597 Os03g0841900 "Os03g0841900 pro 0.453 0.512 0.317 3.1e-50
UNIPROTKB|A8J3K3558 CHLREDRAFT_130438 "Predicted p 0.725 0.878 0.306 5.8e-50
UNIPROTKB|A8J7T2566 CHLREDRAFT_176572 "Predicted p 0.472 0.563 0.325 6.8e-45
TAIR|locus:2009395574 AT1G57770 [Arabidopsis thalian 0.444 0.522 0.326 2e-35
UNIPROTKB|P17054524 crtI "Phytoene desaturase (neu 0.374 0.482 0.261 2.2e-21
UNIPROTKB|P21685492 crtI "Phytoene desaturase (lyc 0.694 0.953 0.254 1.4e-20
ZFIN|ZDB-GENE-050320-11607 retsat "retinol saturase (all- 0.518 0.576 0.243 5.2e-19
TAIR|locus:2033055 CRTISO "carotenoid isomerase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2291 (811.5 bits), Expect = 1.2e-237, P = 1.2e-237
 Identities = 437/527 (82%), Positives = 472/527 (89%)

Query:   135 TVMSVDNLVEIGGNEGMSR-GADD-YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192
             TV SV + V     +G  R G +  YDAIVIGSGIGGLVAATQLAVK ARVLVLEKY+IP
Sbjct:    53 TVKSVSSSVVASTVQGTKRDGGESLYDAIVIGSGIGGLVAATQLAVKEARVLVLEKYLIP 112

Query:   193 GGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPND 252
             GGSSG+YERDGYTFDVGSSVMFGFSDKGNLNLITQAL AVG +MEVIPDPTTVHFHLPN+
Sbjct:   113 GGSSGFYERDGYTFDVGSSVMFGFSDKGNLNLITQALKAVGRKMEVIPDPTTVHFHLPNN 172

Query:   253 LSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312
             LSVR+HREY DF+AELTSKFPHEKEG+L FYG+CWKIFN+LNSLELKSLEEPIYLFGQFF
Sbjct:   173 LSVRIHREYDDFIAELTSKFPHEKEGILGFYGDCWKIFNSLNSLELKSLEEPIYLFGQFF 232

Query:   313 KRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCD 372
             ++PLECLTLAYYLPQNAG IARKYIKDPQLLSFIDAECFIVST+NALQTPMINASMVLCD
Sbjct:   233 QKPLECLTLAYYLPQNAGAIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCD 292

Query:   373 RHFXXXXXXXXXXXXXAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYA 432
             RH+             AKSLA+GL D+GSEI YKANV  +IL+ GKAVGVRL+DGREF+A
Sbjct:   293 RHYGGINYPVGGVGGIAKSLAEGLVDQGSEIQYKANVKSIILDHGKAVGVRLADGREFFA 352

Query:   433 KTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHF 492
             KTIISNATRWDTFGKLLKGE+LPKEEENFQK+YVKAPSFLSIHMGVKAEVLPPDTDCHHF
Sbjct:   353 KTIISNATRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHF 412

Query:   493 VLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKE 552
             VLEDDW  LEEPYGSIFLSIPT+LDSSLAP+G HILHIFT  SIEDWEGL  K+Y+AKKE
Sbjct:   413 VLEDDWKNLEEPYGSIFLSIPTILDSSLAPDGRHILHIFTTSSIEDWEGLPPKEYEAKKE 472

Query:   553 LVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPF 612
              VA  II RLE KLFPGL  SI F+E+G+P+THRR+LARD+GTYGPMPRGTPKGLLGMPF
Sbjct:   473 DVAARIIQRLEKKLFPGLSSSITFKEVGTPRTHRRFLARDKGTYGPMPRGTPKGLLGMPF 532

Query:   613 NTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPV 659
             NTT I+GLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKS V
Sbjct:   533 NTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSRV 579
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IBA;TAS
GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IGI;TAS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016853 "isomerase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009662 "etioplast organization" evidence=IMP
GO:0046608 "carotenoid isomerase activity" evidence=IGI;IMP
UNIPROTKB|Q0IS25 Os11g0572700 "Os11g0572700 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A8J9E9 CHLREDRAFT_196597 "Carotenoid isomerase" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
UNIPROTKB|Q10AT7 Os03g0841900 "Os03g0841900 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A8J3K3 CHLREDRAFT_130438 "Predicted protein" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
UNIPROTKB|A8J7T2 CHLREDRAFT_176572 "Predicted protein" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
TAIR|locus:2009395 AT1G57770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P17054 crtI "Phytoene desaturase (neurosporene-forming)" [Rhodobacter capsulatus SB 1003 (taxid:272942)] Back     alignment and assigned GO terms
UNIPROTKB|P21685 crtI "Phytoene desaturase (lycopene-forming)" [Pantoea ananatis (taxid:553)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050320-11 retsat "retinol saturase (all-trans-retinol 13,14-reductase)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8S4R4CRTSO_SOLLC5, ., 2, ., 1, ., 1, 30.77810.89770.9853N/Ano
Q52QW2CRTS2_ONCHC5, ., 2, ., 1, ., 1, 30.80750.78510.9028N/Ano
Q52QW3CRTS1_ONCHC5, ., 2, ., 1, ., 1, 30.80940.78510.9028N/Ano
Q2VEX9CRTSO_DAUCA5, ., 2, ., 1, ., 1, 30.76510.87400.9593N/Ano
Q9M9Y8CRTSO_ARATH5, ., 2, ., 1, ., 1, 30.87540.74960.8504yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query675
TIGR02730493 TIGR02730, carot_isom, carotene isomerase 0.0
COG1233487 COG1233, COG1233, Phytoene dehydrogenase and relat 7e-93
TIGR02733492 TIGR02733, desat_CrtD, C-3',4' desaturase CrtD 1e-46
TIGR02734502 TIGR02734, crtI_fam, phytoene desaturase 2e-39
pfam1345066 pfam13450, NAD_binding_8, NAD(P)-binding Rossmann- 2e-12
pfam01593444 pfam01593, Amino_oxidase, Flavin containing amine 3e-12
COG1232444 COG1232, HemY, Protoporphyrinogen oxidase [Coenzym 7e-09
PRK05249461 PRK05249, PRK05249, soluble pyridine nucleotide tr 2e-07
pfam01266234 pfam01266, DAO, FAD dependent oxidoreductase 7e-07
COG0665387 COG0665, DadA, Glycine/D-amino acid oxidases (deam 2e-06
COG2303542 COG2303, BetA, Choline dehydrogenase and related f 2e-06
COG0644396 COG0644, FixC, Dehydrogenases (flavoproteins) [Ene 2e-06
COG1249454 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenas 3e-06
PRK12834549 PRK12834, PRK12834, putative FAD-binding dehydroge 3e-06
COG1053562 COG1053, SdhA, Succinate dehydrogenase/fumarate re 6e-06
PRK07233434 PRK07233, PRK07233, hypothetical protein; Provisio 1e-05
PRK07121492 PRK07121, PRK07121, hypothetical protein; Validate 1e-05
pfam00890401 pfam00890, FAD_binding_2, FAD binding domain 2e-05
COG3573552 COG3573, COG3573, Predicted oxidoreductase [Genera 7e-05
PRK07804541 PRK07804, PRK07804, L-aspartate oxidase; Provision 8e-05
PRK12839572 PRK12839, PRK12839, hypothetical protein; Provisio 9e-05
PRK11259376 PRK11259, solA, N-methyltryptophan oxidase; Provis 9e-05
PRK12844557 PRK12844, PRK12844, 3-ketosteroid-delta-1-dehydrog 1e-04
PLN02328808 PLN02328, PLN02328, lysine-specific histone demeth 2e-04
PRK06370463 PRK06370, PRK06370, mercuric reductase; Validated 2e-04
COG1635262 COG1635, THI4, Ribulose 1,5-bisphosphate synthetas 2e-04
TIGR02032295 TIGR02032, GG-red-SF, geranylgeranyl reductase fam 3e-04
PRK07843557 PRK07843, PRK07843, 3-ketosteroid-delta-1-dehydrog 3e-04
PRK04176257 PRK04176, PRK04176, ribulose-1,5-biphosphate synth 3e-04
PRK06134581 PRK06134, PRK06134, putative FAD-binding dehydroge 3e-04
PRK08163396 PRK08163, PRK08163, salicylate hydroxylase; Provis 3e-04
COG0562374 COG0562, Glf, UDP-galactopyranose mutase [Cell env 4e-04
PRK07208479 PRK07208, PRK07208, hypothetical protein; Provisio 4e-04
pfam01946229 pfam01946, Thi4, Thi4 family 4e-04
PRK12843578 PRK12843, PRK12843, putative FAD-binding dehydroge 4e-04
PRK10157428 PRK10157, PRK10157, putative oxidoreductase FixC; 4e-04
PRK06292460 PRK06292, PRK06292, dihydrolipoamide dehydrogenase 4e-04
pfam12831415 pfam12831, FAD_oxidored, FAD dependent oxidoreduct 4e-04
PRK12842574 PRK12842, PRK12842, putative succinate dehydrogena 4e-04
COG0654387 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydrox 5e-04
TIGR01350460 TIGR01350, lipoamide_DH, dihydrolipoamide dehydrog 5e-04
PLN02576496 PLN02576, PLN02576, protoporphyrinogen oxidase 6e-04
PRK11883451 PRK11883, PRK11883, protoporphyrinogen oxidase; Re 7e-04
PRK08274466 PRK08274, PRK08274, tricarballylate dehydrogenase; 8e-04
TIGR00292254 TIGR00292, TIGR00292, thiazole biosynthesis enzyme 8e-04
PTZ00367567 PTZ00367, PTZ00367, squalene epoxidase; Provisiona 9e-04
TIGR01438484 TIGR01438, TGR, thioredoxin and glutathione reduct 0.001
PRK05192 618 PRK05192, PRK05192, tRNA uridine 5-carboxymethylam 0.001
TIGR01377380 TIGR01377, soxA_mon, sarcosine oxidase, monomeric 0.001
pfam07992283 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulp 0.001
pfam03486405 pfam03486, HI0933_like, HI0933-like protein 0.001
COG2081408 COG2081, COG2081, Predicted flavoproteins [General 0.002
PRK06416462 PRK06416, PRK06416, dihydrolipoamide dehydrogenase 0.002
PRK11728393 PRK11728, PRK11728, hydroxyglutarate oxidase; Prov 0.003
COG0029518 COG0029, NadB, Aspartate oxidase [Coenzyme metabol 0.004
PRK06116450 PRK06116, PRK06116, glutathione reductase; Validat 0.004
PRK06481506 PRK06481, PRK06481, fumarate reductase flavoprotei 0.004
PRK05329422 PRK05329, PRK05329, anaerobic glycerol-3-phosphate 0.004
>gnl|CDD|131777 TIGR02730, carot_isom, carotene isomerase Back     alignment and domain information 
 Score =  909 bits (2352), Expect = 0.0
 Identities = 345/495 (69%), Positives = 413/495 (83%), Gaps = 2/495 (0%)

Query: 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFS 217
           YDAIVIGSGIGGLV ATQLAVKGA+VLVLE+Y+IPGGS+GY+ER+GY FDVG+S++FGF 
Sbjct: 1   YDAIVIGSGIGGLVTATQLAVKGAKVLVLERYLIPGGSAGYFEREGYRFDVGASMIFGFG 60

Query: 218 DKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
           DKG  NL+T+ALAAVG ++E IPDP  +H+HLPN L+V+VHREY DF+ EL +KFPHEKE
Sbjct: 61  DKGTTNLLTRALAAVGRKLETIPDPVQIHYHLPNGLNVKVHREYDDFIQELVAKFPHEKE 120

Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYI 337
           G+  FY ECW++FN LNS+EL SLEEP YLF  FFK PL CL LA YLPQNAG+IAR+YI
Sbjct: 121 GIRRFYDECWQVFNCLNSMELLSLEEPRYLFRVFFKHPLACLGLAKYLPQNAGDIARRYI 180

Query: 338 KDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLA 397
           +DP LL FID ECF  S + A QTPMINA MV  DRH+GGINYP GGVG IA+SL KGL 
Sbjct: 181 RDPGLLKFIDIECFCWSVVPADQTPMINAGMVFSDRHYGGINYPKGGVGQIAESLVKGLE 240

Query: 398 DKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKE 457
             G +I Y+A VTK+ILE GKAVGV+L+DG + YAK I+SNATRWDTFGKLLK E LPK+
Sbjct: 241 KHGGQIRYRARVTKIILENGKAVGVKLADGEKIYAKRIVSNATRWDTFGKLLKAENLPKK 300

Query: 458 EENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLD 517
           E+N+Q+ YVK+PSFLS+H+GVKA+VLPP T+CHH +LE DW  LE+P G+IF+SIPT+LD
Sbjct: 301 EKNWQRNYVKSPSFLSLHLGVKADVLPPGTECHHILLE-DWTNLEKPQGTIFVSIPTLLD 359

Query: 518 SSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFR 577
            SLAPEGHHI+H FT  S+EDW+GL+ KDY+AKKE  A+ II+RLE K+FPGL  +I ++
Sbjct: 360 PSLAPEGHHIIHTFTPSSMEDWQGLSPKDYEAKKEADAERIIDRLE-KIFPGLDSAIDYK 418

Query: 578 EIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVA 637
           E+G+P+THRR+L RD GTYGP+PR T  GLL MPFN T I GLYCVGDSCFPGQG+ AVA
Sbjct: 419 EVGTPRTHRRFLGRDSGTYGPIPRRTLPGLLPMPFNRTAIPGLYCVGDSCFPGQGLNAVA 478

Query: 638 FSGVMCAHRVAADIG 652
           FSG  CAHRVAAD+G
Sbjct: 479 FSGFACAHRVAADLG 493

Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. Length = 493
>gnl|CDD|224154 COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233987 TIGR02733, desat_CrtD, C-3',4' desaturase CrtD Back     alignment and domain information
>gnl|CDD|233988 TIGR02734, crtI_fam, phytoene desaturase Back     alignment and domain information
>gnl|CDD|205628 pfam13450, NAD_binding_8, NAD(P)-binding Rossmann-like domain Back     alignment and domain information
>gnl|CDD|216593 pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase Back     alignment and domain information
>gnl|CDD|224153 COG1232, HemY, Protoporphyrinogen oxidase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235373 PRK05249, PRK05249, soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|216400 pfam01266, DAO, FAD dependent oxidoreductase Back     alignment and domain information
>gnl|CDD|223737 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|225186 COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|223717 COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|224169 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|183782 PRK12834, PRK12834, putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|223981 COG1053, SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|235977 PRK07233, PRK07233, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|180854 PRK07121, PRK07121, hypothetical protein; Validated Back     alignment and domain information
>gnl|CDD|216176 pfam00890, FAD_binding_2, FAD binding domain Back     alignment and domain information
>gnl|CDD|226103 COG3573, COG3573, Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>gnl|CDD|236102 PRK07804, PRK07804, L-aspartate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|237223 PRK12839, PRK12839, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236887 PRK11259, solA, N-methyltryptophan oxidase; Provisional Back     alignment and domain information
>gnl|CDD|183787 PRK12844, PRK12844, 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|215187 PLN02328, PLN02328, lysine-specific histone demethylase 1 homolog Back     alignment and domain information
>gnl|CDD|235787 PRK06370, PRK06370, mercuric reductase; Validated Back     alignment and domain information
>gnl|CDD|224550 COG1635, THI4, Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233693 TIGR02032, GG-red-SF, geranylgeranyl reductase family Back     alignment and domain information
>gnl|CDD|236111 PRK07843, PRK07843, 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|235241 PRK04176, PRK04176, ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180419 PRK06134, PRK06134, putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|181262 PRK08163, PRK08163, salicylate hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|223636 COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|235967 PRK07208, PRK07208, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|145231 pfam01946, Thi4, Thi4 family Back     alignment and domain information
>gnl|CDD|237225 PRK12843, PRK12843, putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|182273 PRK10157, PRK10157, putative oxidoreductase FixC; Provisional Back     alignment and domain information
>gnl|CDD|235774 PRK06292, PRK06292, dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|221798 pfam12831, FAD_oxidored, FAD dependent oxidoreductase Back     alignment and domain information
>gnl|CDD|237224 PRK12842, PRK12842, putative succinate dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|223727 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|233368 TIGR01350, lipoamide_DH, dihydrolipoamide dehydrogenase Back     alignment and domain information
>gnl|CDD|215314 PLN02576, PLN02576, protoporphyrinogen oxidase Back     alignment and domain information
>gnl|CDD|237009 PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed Back     alignment and domain information
>gnl|CDD|236214 PRK08274, PRK08274, tricarballylate dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|232908 TIGR00292, TIGR00292, thiazole biosynthesis enzyme Back     alignment and domain information
>gnl|CDD|240384 PTZ00367, PTZ00367, squalene epoxidase; Provisional Back     alignment and domain information
>gnl|CDD|233412 TIGR01438, TGR, thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>gnl|CDD|235362 PRK05192, PRK05192, tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated Back     alignment and domain information
>gnl|CDD|130444 TIGR01377, soxA_mon, sarcosine oxidase, monomeric form Back     alignment and domain information
>gnl|CDD|219686 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase Back     alignment and domain information
>gnl|CDD|217590 pfam03486, HI0933_like, HI0933-like protein Back     alignment and domain information
>gnl|CDD|224992 COG2081, COG2081, Predicted flavoproteins [General function prediction only] Back     alignment and domain information
>gnl|CDD|235798 PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|183292 PRK11728, PRK11728, hydroxyglutarate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|223108 COG0029, NadB, Aspartate oxidase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235701 PRK06116, PRK06116, glutathione reductase; Validated Back     alignment and domain information
>gnl|CDD|180584 PRK06481, PRK06481, fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>gnl|CDD|235412 PRK05329, PRK05329, anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 675
TIGR02730493 carot_isom carotene isomerase. Members of this fam 100.0
TIGR02734502 crtI_fam phytoene desaturase. Phytoene is converte 100.0
TIGR02733492 desat_CrtD C-3',4' desaturase CrtD. Members of thi 100.0
KOG4254561 consensus Phytoene desaturase [Coenzyme transport 100.0
COG1233487 Phytoene dehydrogenase and related proteins [Secon 100.0
PLN02612567 phytoene desaturase 100.0
PLN02487569 zeta-carotene desaturase 100.0
PRK07233434 hypothetical protein; Provisional 100.0
TIGR02732474 zeta_caro_desat carotene 7,8-desaturase. Carotene 100.0
PRK11883451 protoporphyrinogen oxidase; Reviewed 99.97
TIGR00562462 proto_IX_ox protoporphyrinogen oxidase. This prote 99.97
TIGR02731453 phytoene_desat phytoene desaturase. Plants and cya 99.97
PRK12416463 protoporphyrinogen oxidase; Provisional 99.97
PRK07208479 hypothetical protein; Provisional 99.96
PLN02268435 probable polyamine oxidase 99.96
COG1232444 HemY Protoporphyrinogen oxidase [Coenzyme metaboli 99.96
PLN02576496 protoporphyrinogen oxidase 99.96
PLN02676487 polyamine oxidase 99.96
PLN02529 738 lysine-specific histone demethylase 1 99.96
PLN02568539 polyamine oxidase 99.95
TIGR03467419 HpnE squalene-associated FAD-dependent desaturase. 99.95
PLN02328 808 lysine-specific histone demethylase 1 homolog 99.95
PF01593450 Amino_oxidase: Flavin containing amine oxidoreduct 99.95
PLN03000 881 amine oxidase 99.95
PLN02976 1713 amine oxidase 99.94
COG1231450 Monoamine oxidase [Amino acid transport and metabo 99.93
KOG0029501 consensus Amine oxidase [Secondary metabolites bio 99.93
KOG0685498 consensus Flavin-containing amine oxidase [Coenzym 99.91
COG3349485 Uncharacterized conserved protein [Function unknow 99.87
COG3380331 Predicted NAD/FAD-dependent oxidoreductase [Genera 99.84
PTZ00363443 rab-GDP dissociation inhibitor; Provisional 99.83
KOG1276491 consensus Protoporphyrinogen oxidase [Coenzyme tra 99.78
PF01266358 DAO: FAD dependent oxidoreductase; InterPro: IPR00 99.73
COG2907447 Predicted NAD/FAD-binding protein [General functio 99.69
TIGR03329460 Phn_aa_oxid putative aminophosphonate oxidoreducta 99.64
PRK13977576 myosin-cross-reactive antigen; Provisional 99.64
PRK11259376 solA N-methyltryptophan oxidase; Provisional 99.63
TIGR01377380 soxA_mon sarcosine oxidase, monomeric form. Sarcos 99.61
PRK00711416 D-amino acid dehydrogenase small subunit; Validate 99.6
TIGR01373407 soxB sarcosine oxidase, beta subunit family, heter 99.59
PRK12409410 D-amino acid dehydrogenase small subunit; Provisio 99.58
COG2081408 Predicted flavoproteins [General function predicti 99.54
PRK01747662 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans 99.51
COG0644396 FixC Dehydrogenases (flavoproteins) [Energy produc 99.48
KOG2820399 consensus FAD-dependent oxidoreductase [General fu 99.47
PRK10157428 putative oxidoreductase FixC; Provisional 99.46
COG0665387 DadA Glycine/D-amino acid oxidases (deaminating) [ 99.45
PF03486409 HI0933_like: HI0933-like protein; InterPro: IPR004 99.41
TIGR02032295 GG-red-SF geranylgeranyl reductase family. This mo 99.39
PF1345068 NAD_binding_8: NAD(P)-binding Rossmann-like domain 99.38
PRK10015429 oxidoreductase; Provisional 99.34
PRK08773392 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.32
TIGR01988385 Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub 99.32
PLN02697529 lycopene epsilon cyclase 99.31
PRK06847375 hypothetical protein; Provisional 99.31
COG0654387 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and 99.31
KOG2844 856 consensus Dimethylglycine dehydrogenase precursor 99.3
COG1635262 THI4 Ribulose 1,5-bisphosphate synthetase, convert 99.3
PRK06185407 hypothetical protein; Provisional 99.3
PF00996438 GDI: GDP dissociation inhibitor; InterPro: IPR0182 99.29
COG0579429 Predicted dehydrogenase [General function predicti 99.28
PRK07364415 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.28
TIGR00031377 UDP-GALP_mutase UDP-galactopyranose mutase. The ge 99.27
PRK09126392 hypothetical protein; Provisional 99.27
PRK11728393 hydroxyglutarate oxidase; Provisional 99.27
PRK11101 546 glpA sn-glycerol-3-phosphate dehydrogenase subunit 99.26
TIGR01984382 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T 99.25
PLN02463447 lycopene beta cyclase 99.24
TIGR02028398 ChlP geranylgeranyl reductase. This model represen 99.23
PLN00093450 geranylgeranyl diphosphate reductase; Provisional 99.23
PRK07045388 putative monooxygenase; Reviewed 99.23
PRK04176257 ribulose-1,5-biphosphate synthetase; Provisional 99.22
TIGR03364365 HpnW_proposed FAD dependent oxidoreductase TIGR033 99.22
PRK05714405 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.21
PTZ00383497 malate:quinone oxidoreductase; Provisional 99.21
PRK08244 493 hypothetical protein; Provisional 99.2
TIGR00292254 thiazole biosynthesis enzyme. This enzyme is invol 99.2
PRK07608388 ubiquinone biosynthesis hydroxylase family protein 99.19
PRK08020391 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin 99.19
TIGR02023388 BchP-ChlP geranylgeranyl reductase. This model rep 99.19
PRK06481506 fumarate reductase flavoprotein subunit; Validated 99.19
PRK08013400 oxidoreductase; Provisional 99.18
PRK07588391 hypothetical protein; Provisional 99.18
PRK07333403 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 99.17
PRK07494388 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 99.16
PRK12845564 3-ketosteroid-delta-1-dehydrogenase; Reviewed 99.16
PF01946230 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K. 99.16
PRK08274466 tricarballylate dehydrogenase; Validated 99.15
PF00890417 FAD_binding_2: FAD binding domain of the Pfam fami 99.15
KOG2853509 consensus Possible oxidoreductase [General functio 99.14
PRK05732395 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.14
PRK06183 538 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Va 99.14
TIGR01790388 carotene-cycl lycopene cyclase family protein. Thi 99.12
PRK08850405 2-octaprenyl-6-methoxyphenol hydroxylase; Validate 99.12
PRK08132 547 FAD-dependent oxidoreductase; Provisional 99.12
COG0578532 GlpA Glycerol-3-phosphate dehydrogenase [Energy pr 99.11
COG0493457 GltD NADPH-dependent glutamate synthase beta chain 99.11
TIGR02352337 thiamin_ThiO glycine oxidase ThiO. This family con 99.09
PRK12779 944 putative bifunctional glutamate synthase subunit b 99.08
TIGR01320483 mal_quin_oxido malate:quinone-oxidoreductase. This 99.08
COG2509486 Uncharacterized FAD-dependent dehydrogenases [Gene 99.08
PRK06753373 hypothetical protein; Provisional 99.07
PRK12842574 putative succinate dehydrogenase; Reviewed 99.07
PLN02464627 glycerol-3-phosphate dehydrogenase 99.06
PRK08849384 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 99.06
PRK12266508 glpD glycerol-3-phosphate dehydrogenase; Reviewed 99.05
PLN02985514 squalene monooxygenase 99.05
PRK07121492 hypothetical protein; Validated 99.05
PRK05257494 malate:quinone oxidoreductase; Validated 99.05
PRK13339497 malate:quinone oxidoreductase; Reviewed 99.04
PRK06617374 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.04
PRK11445351 putative oxidoreductase; Provisional 99.04
PRK06126 545 hypothetical protein; Provisional 99.03
PRK12769654 putative oxidoreductase Fe-S binding subunit; Revi 99.03
PRK12809639 putative oxidoreductase Fe-S binding subunit; Revi 99.01
TIGR01813439 flavo_cyto_c flavocytochrome c. This model describ 99.01
COG0562374 Glf UDP-galactopyranose mutase [Cell envelope biog 99.0
KOG2415 621 consensus Electron transfer flavoprotein ubiquinon 99.0
PRK12831464 putative oxidoreductase; Provisional 99.0
PF05834374 Lycopene_cycl: Lycopene cyclase protein; InterPro: 98.99
PRK08163396 salicylate hydroxylase; Provisional 98.99
TIGR01318467 gltD_gamma_fam glutamate synthase small subunit fa 98.99
PRK06996398 hypothetical protein; Provisional 98.98
PRK127751006 putative trifunctional 2-polyprenylphenol hydroxyl 98.97
PRK07538413 hypothetical protein; Provisional 98.97
PRK06134581 putative FAD-binding dehydrogenase; Reviewed 98.97
PRK06175433 L-aspartate oxidase; Provisional 98.97
PRK07190487 hypothetical protein; Provisional 98.97
PRK12835584 3-ketosteroid-delta-1-dehydrogenase; Reviewed 98.96
PRK13369502 glycerol-3-phosphate dehydrogenase; Provisional 98.96
TIGR01989437 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. T 98.95
TIGR03197381 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouri 98.95
PRK06184 502 hypothetical protein; Provisional 98.94
PRK12844557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 98.94
PRK06834488 hypothetical protein; Provisional 98.93
PRK07573 640 sdhA succinate dehydrogenase flavoprotein subunit; 98.92
PRK05192 618 tRNA uridine 5-carboxymethylaminomethyl modificati 98.91
PRK06452 566 sdhA succinate dehydrogenase flavoprotein subunit; 98.91
PLN02661357 Putative thiazole synthesis 98.91
PRK12834549 putative FAD-binding dehydrogenase; Reviewed 98.91
PRK12837513 3-ketosteroid-delta-1-dehydrogenase; Provisional 98.9
PRK12843578 putative FAD-binding dehydrogenase; Reviewed 98.9
PRK07236386 hypothetical protein; Provisional 98.9
PF01134392 GIDA: Glucose inhibited division protein A; InterP 98.89
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 98.89
TIGR01812 566 sdhA_frdA_Gneg succinate dehydrogenase or fumarate 98.88
KOG03992142 consensus Glutamate synthase [Amino acid transport 98.88
PTZ00139 617 Succinate dehydrogenase [ubiquinone] flavoprotein 98.88
PRK06854 608 adenylylsulfate reductase subunit alpha; Validated 98.88
TIGR00275400 flavoprotein, HI0933 family. The model when search 98.88
PRK08294 634 phenol 2-monooxygenase; Provisional 98.87
PRK09078 598 sdhA succinate dehydrogenase flavoprotein subunit; 98.87
PF01494356 FAD_binding_3: FAD binding domain; InterPro: IPR00 98.87
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 98.86
PRK07843557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 98.86
PRK07804541 L-aspartate oxidase; Provisional 98.85
KOG2614420 consensus Kynurenine 3-monooxygenase and related f 98.85
PRK08958 588 sdhA succinate dehydrogenase flavoprotein subunit; 98.84
TIGR03378419 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase 98.84
PLN02927 668 antheraxanthin epoxidase/zeaxanthin epoxidase 98.84
PRK05868372 hypothetical protein; Validated 98.84
PLN00128 635 Succinate dehydrogenase [ubiquinone] flavoprotein 98.83
PRK12839572 hypothetical protein; Provisional 98.83
PTZ00367567 squalene epoxidase; Provisional 98.82
PRK07803 626 sdhA succinate dehydrogenase flavoprotein subunit; 98.82
PRK05945 575 sdhA succinate dehydrogenase flavoprotein subunit; 98.82
TIGR033151012 Se_ygfK putative selenate reductase, YgfK subunit. 98.82
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 98.81
PRK08275 554 putative oxidoreductase; Provisional 98.81
PRK08205 583 sdhA succinate dehydrogenase flavoprotein subunit; 98.81
TIGR00551488 nadB L-aspartate oxidase. L-aspartate oxidase is t 98.81
PRK12810471 gltD glutamate synthase subunit beta; Reviewed 98.81
PRK07057 591 sdhA succinate dehydrogenase flavoprotein subunit; 98.8
PRK08401466 L-aspartate oxidase; Provisional 98.79
PRK07395 553 L-aspartate oxidase; Provisional 98.79
KOG2852380 consensus Possible oxidoreductase [General functio 98.79
PRK06263 543 sdhA succinate dehydrogenase flavoprotein subunit; 98.79
TIGR02485432 CobZ_N-term precorrin 3B synthase CobZ. CobZ is es 98.79
PRK098531019 putative selenate reductase subunit YgfK; Provisio 98.78
PRK08626 657 fumarate reductase flavoprotein subunit; Provision 98.78
TIGR02360390 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. 98.78
PRK06069 577 sdhA succinate dehydrogenase flavoprotein subunit; 98.78
PRK08243392 4-hydroxybenzoate 3-monooxygenase; Validated 98.77
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 98.76
PTZ00306 1167 NADH-dependent fumarate reductase; Provisional 98.76
PRK05329422 anaerobic glycerol-3-phosphate dehydrogenase subun 98.76
PRK08071510 L-aspartate oxidase; Provisional 98.75
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 98.74
PLN02815 594 L-aspartate oxidase 98.73
PRK06475400 salicylate hydroxylase; Provisional 98.72
PRK07512513 L-aspartate oxidase; Provisional 98.72
KOG1439440 consensus RAB proteins geranylgeranyltransferase c 98.72
PLN02172461 flavin-containing monooxygenase FMO GS-OX 98.71
PF12831428 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3 98.71
PRK06567 1028 putative bifunctional glutamate synthase subunit b 98.71
TIGR01317485 GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal 98.69
PRK08641 589 sdhA succinate dehydrogenase flavoprotein subunit; 98.69
TIGR03219414 salicylate_mono salicylate 1-monooxygenase. Member 98.69
PF06100500 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross 98.69
PRK09231 582 fumarate reductase flavoprotein subunit; Validated 98.68
TIGR01176 580 fum_red_Fp fumarate reductase, flavoprotein subuni 98.68
TIGR01811 603 sdhA_Bsu succinate dehydrogenase or fumarate reduc 98.68
TIGR02462544 pyranose_ox pyranose oxidase. Pyranose oxidase (al 98.66
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 98.63
PRK09077536 L-aspartate oxidase; Provisional 98.62
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 98.62
PRK05976472 dihydrolipoamide dehydrogenase; Validated 98.62
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 98.61
KOG1298509 consensus Squalene monooxygenase [Lipid transport 98.61
COG0492305 TrxB Thioredoxin reductase [Posttranslational modi 98.6
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 98.6
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 98.59
TIGR00136 617 gidA glucose-inhibited division protein A. GidA, t 98.58
PRK06116450 glutathione reductase; Validated 98.58
TIGR02061 614 aprA adenosine phosphosulphate reductase, alpha su 98.56
PF00732296 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 98.56
PLN02507499 glutathione reductase 98.52
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 98.51
PRK12814652 putative NADPH-dependent glutamate synthase small 98.51
PRK12771564 putative glutamate synthase (NADPH) small subunit; 98.5
KOG1335506 consensus Dihydrolipoamide dehydrogenase [Energy p 98.5
KOG2404477 consensus Fumarate reductase, flavoprotein subunit 98.5
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 98.5
COG3075421 GlpB Anaerobic glycerol-3-phosphate dehydrogenase 98.48
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 98.42
TIGR03143555 AhpF_homolog putative alkyl hydroperoxide reductas 98.42
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 98.42
PRK13800 897 putative oxidoreductase/HEAT repeat-containing pro 98.41
PRK09897 534 hypothetical protein; Provisional 98.39
PRK06327475 dihydrolipoamide dehydrogenase; Validated 98.38
COG2072443 TrkA Predicted flavoprotein involved in K+ transpo 98.37
PF04820454 Trp_halogenase: Tryptophan halogenase; InterPro: I 98.36
COG5044434 MRS6 RAB proteins geranylgeranyltransferase compon 98.34
PRK13984604 putative oxidoreductase; Provisional 98.33
TIGR01810532 betA choline dehydrogenase. This enzyme is a membe 98.33
PTZ00058561 glutathione reductase; Provisional 98.32
PRK02106560 choline dehydrogenase; Validated 98.3
COG3573552 Predicted oxidoreductase [General function predict 98.28
PLN02546558 glutathione reductase 98.28
PF13454156 NAD_binding_9: FAD-NAD(P)-binding 98.26
COG0029518 NadB Aspartate oxidase [Coenzyme metabolism] 98.23
PF06039488 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro 98.22
PRK07845466 flavoprotein disulfide reductase; Reviewed 98.19
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 98.18
COG1053562 SdhA Succinate dehydrogenase/fumarate reductase, f 98.18
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 98.17
COG1252405 Ndh NADH dehydrogenase, FAD-containing subunit [En 98.1
KOG0042680 consensus Glycerol-3-phosphate dehydrogenase [Ener 98.08
COG2303542 BetA Choline dehydrogenase and related flavoprotei 98.07
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 98.04
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 97.98
PRK06370463 mercuric reductase; Validated 97.96
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 97.96
TIGR03377516 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase 97.95
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 97.93
PRK14694468 putative mercuric reductase; Provisional 97.91
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 97.9
PLN02852491 ferredoxin-NADP+ reductase 97.9
COG0445 621 GidA Flavin-dependent tRNA uridine 5-carboxymethyl 97.9
PLN02785587 Protein HOTHEAD 97.87
PRK08255 765 salicylyl-CoA 5-hydroxylase; Reviewed 97.86
PRK06292460 dihydrolipoamide dehydrogenase; Validated 97.86
KOG1399448 consensus Flavin-containing monooxygenase [Seconda 97.85
TIGR02053463 MerA mercuric reductase. This model represents the 97.81
COG4716587 Myosin-crossreactive antigen [Function unknown] 97.81
PRK14727479 putative mercuric reductase; Provisional 97.79
PRK13748561 putative mercuric reductase; Provisional 97.76
PRK09564444 coenzyme A disulfide reductase; Reviewed 97.75
PTZ00052499 thioredoxin reductase; Provisional 97.74
PTZ00188506 adrenodoxin reductase; Provisional 97.73
COG1148622 HdrA Heterodisulfide reductase, subunit A and rela 97.72
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 97.72
PRK10262321 thioredoxin reductase; Provisional 97.69
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 97.68
PTZ00153659 lipoamide dehydrogenase; Provisional 97.66
KOG2665453 consensus Predicted FAD-dependent oxidoreductase [ 97.65
PTZ00318424 NADH dehydrogenase-like protein; Provisional 97.6
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 97.58
KOG3923342 consensus D-aspartate oxidase [Amino acid transpor 97.57
PRK05335436 tRNA (uracil-5-)-methyltransferase Gid; Reviewed 97.54
TIGR01372 985 soxA sarcosine oxidase, alpha subunit family, hete 97.54
TIGR01789370 lycopene_cycl lycopene cyclase. This model represe 97.52
PF00743531 FMO-like: Flavin-binding monooxygenase-like; Inter 97.51
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 97.5
COG0446415 HcaD Uncharacterized NAD(FAD)-dependent dehydrogen 97.5
PRK06116450 glutathione reductase; Validated 97.47
PF07992201 Pyr_redox_2: Pyridine nucleotide-disulphide oxidor 97.45
PRK05976472 dihydrolipoamide dehydrogenase; Validated 97.43
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 97.43
PRK07845466 flavoprotein disulfide reductase; Reviewed 97.38
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 97.37
PRK14989 847 nitrite reductase subunit NirD; Provisional 97.36
TIGR02374 785 nitri_red_nirB nitrite reductase [NAD(P)H], large 97.35
TIGR00137433 gid_trmFO tRNA:m(5)U-54 methyltransferase. This mo 97.35
PRK14989 847 nitrite reductase subunit NirD; Provisional 97.34
TIGR03862376 flavo_PP4765 uncharacterized flavoprotein, PP_4765 97.34
KOG0405478 consensus Pyridine nucleotide-disulphide oxidoredu 97.33
KOG2311 679 consensus NAD/FAD-utilizing protein possibly invol 97.33
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 97.3
PRK12770352 putative glutamate synthase subunit beta; Provisio 97.3
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 97.27
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 97.26
KOG1238623 consensus Glucose dehydrogenase/choline dehydrogen 97.26
PRK06370463 mercuric reductase; Validated 97.24
PF13434341 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi 97.24
TIGR03385427 CoA_CoA_reduc CoA-disulfide reductase. Members of 97.23
TIGR03169364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 97.23
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 97.21
TIGR02374 785 nitri_red_nirB nitrite reductase [NAD(P)H], large 97.21
PRK06327475 dihydrolipoamide dehydrogenase; Validated 97.2
PTZ00052499 thioredoxin reductase; Provisional 97.17
TIGR02053463 MerA mercuric reductase. This model represents the 97.15
PRK14694468 putative mercuric reductase; Provisional 97.14
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 97.14
PRK07846451 mycothione reductase; Reviewed 97.13
PRK13512438 coenzyme A disulfide reductase; Provisional 97.12
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 97.1
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 97.09
COG4529474 Uncharacterized protein conserved in bacteria [Fun 97.09
PRK14727479 putative mercuric reductase; Provisional 97.08
PRK09564444 coenzyme A disulfide reductase; Reviewed 97.04
PRK13748561 putative mercuric reductase; Provisional 97.01
KOG0404322 consensus Thioredoxin reductase [Posttranslational 97.0
PRK07846451 mycothione reductase; Reviewed 96.93
TIGR03452452 mycothione_red mycothione reductase. Mycothiol, a 96.92
PRK05675 570 sdhA succinate dehydrogenase flavoprotein subunit; 96.9
TIGR03452452 mycothione_red mycothione reductase. Mycothiol, a 96.89
PTZ00058561 glutathione reductase; Provisional 96.88
PF07156368 Prenylcys_lyase: Prenylcysteine lyase; InterPro: I 96.85
KOG1800468 consensus Ferredoxin/adrenodoxin reductase [Nucleo 96.78
PLN02546558 glutathione reductase 96.78
PRK10262321 thioredoxin reductase; Provisional 96.76
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 96.68
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 96.68
KOG2960328 consensus Protein involved in thiamine biosynthesi 96.63
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 96.6
PRK06292460 dihydrolipoamide dehydrogenase; Validated 96.43
KOG1336478 consensus Monodehydroascorbate/ferredoxin reductas 96.42
KOG4716503 consensus Thioredoxin reductase [Posttranslational 96.33
KOG4405547 consensus GDP dissociation inhibitor [Signal trans 96.31
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 96.27
PRK12831464 putative oxidoreductase; Provisional 96.11
PRK13512438 coenzyme A disulfide reductase; Provisional 96.08
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 96.07
PTZ00153659 lipoamide dehydrogenase; Provisional 95.96
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 95.94
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 95.77
COG1251 793 NirB NAD(P)H-nitrite reductase [Energy production 95.64
COG1206439 Gid NAD(FAD)-utilizing enzyme possibly involved in 95.54
COG3486436 IucD Lysine/ornithine N-monooxygenase [Secondary m 95.34
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 94.83
TIGR01816 565 sdhA_forward succinate dehydrogenase, flavoprotein 94.74
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 94.63
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 94.57
PRK12769654 putative oxidoreductase Fe-S binding subunit; Revi 94.51
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 94.43
KOG3855481 consensus Monooxygenase involved in coenzyme Q (ub 94.32
TIGR01318467 gltD_gamma_fam glutamate synthase small subunit fa 94.11
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 94.09
PRK02705459 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 94.02
TIGR01372 985 soxA sarcosine oxidase, alpha subunit family, hete 93.91
PRK01438480 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 93.82
PRK06129308 3-hydroxyacyl-CoA dehydrogenase; Validated 93.12
PF02558151 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: 92.91
PRK06718202 precorrin-2 dehydrogenase; Reviewed 92.83
COG0569225 TrkA K+ transport systems, NAD-binding component [ 92.75
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 92.52
PRK07819286 3-hydroxybutyryl-CoA dehydrogenase; Validated 92.4
PRK14106450 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 92.4
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 92.01
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 92.0
PRK06249313 2-dehydropantoate 2-reductase; Provisional 91.9
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 91.64
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 91.51
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 91.18
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 91.14
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 91.13
PRK05708305 2-dehydropantoate 2-reductase; Provisional 90.76
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 90.68
COG1004414 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en 90.57
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 90.5
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 90.49
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 90.28
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 90.27
PRK12921305 2-dehydropantoate 2-reductase; Provisional 90.12
KOG1346659 consensus Programmed cell death 8 (apoptosis-induc 90.11
PRK06130311 3-hydroxybutyryl-CoA dehydrogenase; Validated 90.0
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 89.97
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 89.91
PRK11064415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 89.83
PRK08229341 2-dehydropantoate 2-reductase; Provisional 89.73
PRK06719157 precorrin-2 dehydrogenase; Validated 89.66
cd05292308 LDH_2 A subgroup of L-lactate dehydrogenases. L-la 89.53
PRK04148134 hypothetical protein; Provisional 89.52
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 89.38
TIGR01763305 MalateDH_bact malate dehydrogenase, NAD-dependent. 89.37
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 89.26
cd01080168 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of 89.25
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 89.06
PRK08268507 3-hydroxy-acyl-CoA dehydrogenase; Validated 88.98
TIGR03026411 NDP-sugDHase nucleotide sugar dehydrogenase. All o 88.89
TIGR03169364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 88.74
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 88.74
COG1748389 LYS9 Saccharopine dehydrogenase and related protei 88.39
KOG2495491 consensus NADH-dehydrogenase (ubiquinone) [Energy 87.97
PLN02507499 glutathione reductase 87.96
PRK09424509 pntA NAD(P) transhydrogenase subunit alpha; Provis 87.84
PRK07531495 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe 87.72
PRK00094325 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr 87.68
TIGR03143555 AhpF_homolog putative alkyl hydroperoxide reductas 87.63
PF03446163 NAD_binding_2: NAD binding domain of 6-phosphogluc 87.63
PRK14620326 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 87.51
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 87.31
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 87.18
TIGR02279503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 87.16
KOG3851446 consensus Sulfide:quinone oxidoreductase/flavo-bin 87.06
PRK07417279 arogenate dehydrogenase; Reviewed 86.96
PRK12770352 putative glutamate synthase subunit beta; Provisio 86.78
cd01075200 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l 86.75
KOG2755334 consensus Oxidoreductase [General function predict 86.49
PRK02472447 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 86.47
PRK04308445 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 86.37
PRK12549284 shikimate 5-dehydrogenase; Reviewed 86.36
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 86.35
PTZ00082321 L-lactate dehydrogenase; Provisional 86.26
COG0771448 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas 86.23
PRK00066315 ldh L-lactate dehydrogenase; Reviewed 86.03
PRK01710458 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 85.92
PRK15057388 UDP-glucose 6-dehydrogenase; Provisional 85.88
KOG2304298 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t 85.87
TIGR01915219 npdG NADPH-dependent F420 reductase. This model re 85.56
PRK08306296 dipicolinate synthase subunit A; Reviewed 85.31
PRK00421461 murC UDP-N-acetylmuramate--L-alanine ligase; Provi 85.05
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 85.03
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 85.03
cd0519186 NAD_bind_amino_acid_DH NAD(P) binding domain of am 85.02
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 85.0
PRK11730715 fadB multifunctional fatty acid oxidation complex 84.86
PLN02353473 probable UDP-glucose 6-dehydrogenase 84.86
PRK06223307 malate dehydrogenase; Reviewed 84.76
cd05291306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 84.72
PRK03369488 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 84.55
PF13478136 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2 84.51
PRK15116268 sulfur acceptor protein CsdL; Provisional 84.43
PRK04690468 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 84.39
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 84.32
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 84.31
TIGR01505291 tartro_sem_red 2-hydroxy-3-oxopropionate reductase 84.1
TIGR02437714 FadB fatty oxidation complex, alpha subunit FadB. 84.09
PRK12810471 gltD glutamate synthase subunit beta; Reviewed 83.88
TIGR02853287 spore_dpaA dipicolinic acid synthetase, A subunit. 83.79
COG1250307 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo 83.77
PRK12548289 shikimate 5-dehydrogenase; Provisional 83.67
cd05293312 LDH_1 A subgroup of L-lactate dehydrogenases. L-la 83.44
cd05311226 NAD_bind_2_malic_enz NAD(P) binding domain of mali 83.39
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 83.38
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 83.37
PRK11199374 tyrA bifunctional chorismate mutase/prephenate deh 83.04
TIGR00507270 aroE shikimate 5-dehydrogenase. This model finds p 82.9
PF00056141 Ldh_1_N: lactate/malate dehydrogenase, NAD binding 82.89
PRK00141473 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 82.75
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 82.7
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 82.65
TIGR00936406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 82.47
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 82.41
PTZ00117319 malate dehydrogenase; Provisional 82.16
PTZ00318424 NADH dehydrogenase-like protein; Provisional 82.15
TIGR02441737 fa_ox_alpha_mit fatty acid oxidation complex, alph 82.07
PRK07502307 cyclohexadienyl dehydrogenase; Validated 81.98
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 81.78
PRK15461296 NADH-dependent gamma-hydroxybutyrate dehydrogenase 81.73
cd01339300 LDH-like_MDH L-lactate dehydrogenase-like malate d 81.64
cd01483143 E1_enzyme_family Superfamily of activating enzymes 81.24
PRK01368454 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 81.11
COG1893307 ApbA Ketopantoate reductase [Coenzyme metabolism] 81.05
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 80.97
PRK02006498 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 80.92
COG1251 793 NirB NAD(P)H-nitrite reductase [Energy production 80.84
PRK09496453 trkA potassium transporter peripheral membrane com 80.83
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 80.79
PTZ00142470 6-phosphogluconate dehydrogenase; Provisional 80.76
TIGR02440699 FadJ fatty oxidation complex, alpha subunit FadJ. 80.72
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 80.68
PRK11559296 garR tartronate semialdehyde reductase; Provisiona 80.49
PRK11154708 fadJ multifunctional fatty acid oxidation complex 80.33
PRK00683418 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 80.07
TIGR00872298 gnd_rel 6-phosphogluconate dehydrogenase (decarbox 80.03
TIGR02355240 moeB molybdopterin synthase sulfurylase MoeB. This 80.02
>TIGR02730 carot_isom carotene isomerase Back     alignment and domain information 
Probab=100.00  E-value=2.1e-60  Score=530.94  Aligned_cols=493  Identities=70%  Similarity=1.233  Sum_probs=406.7

Q ss_pred             ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCCcceeEeeCCeEEccccccccCCCCCCchHHHHHHHHHcCCcee
Q 005832          158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEME  237 (675)
Q Consensus       158 ~~~~iig~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lGl~~~  237 (675)
                      +||||||||++||+||.+|+++|++|+|+||+..+||+++++.++|+.||.|++.+.++.+...++.+.+.+..++..++
T Consensus         1 ~dvvViGaG~~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~fd~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (493)
T TIGR02730         1 YDAIVIGSGIGGLVTATQLAVKGAKVLVLERYLIPGGSAGYFEREGYRFDVGASMIFGFGDKGTTNLLTRALAAVGRKLE   80 (493)
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCCceeEeccCCEEEEecchhheecCCcccccHHHHHHHHcCCccc
Confidence            69999999999999999999999999999999999999999999999999999999887655566778888888887766


Q ss_pred             EeeCCCeEEEEcCCCeEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhcChhh
Q 005832          238 VIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLE  317 (675)
Q Consensus       238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (675)
                      ....+..+.+.+++|..+.++.+.+++.+++.+.+|.+.+++.+|++...+.+..+.......+..+..+...+...+..
T Consensus        81 ~~~~~~~~~~~~~~g~~~~~~~d~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (493)
T TIGR02730        81 TIPDPVQIHYHLPNGLNVKVHREYDDFIQELVAKFPHEKEGIRRFYDECWQVFNCLNSMELLSLEEPRYLFRVFFKHPLA  160 (493)
T ss_pred             ccCCCccEEEECCCCeeEeeecCHHHHHHHHHHHCchhHHHHHHHHHHHHHHHHHHHhhhhccccChHHHHHHHhhchhh
Confidence            66655567778888888999999999999999999999999999999887766544332221222222222222222222


Q ss_pred             hhHHhhhccccHHHHHHHhCCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHHHhhcCcccccCCCHHHHHHHHHHHHH
Q 005832          318 CLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLA  397 (675)
Q Consensus       318 ~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~p~gG~~~l~~~L~~~l~  397 (675)
                      ...+..+...++.+++++++.++.++.++...+.+++...+.++|+..+.+.+.....+++++|.||++.++++|.+.++
T Consensus       161 ~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~g~~~~~gG~~~l~~~L~~~~~  240 (493)
T TIGR02730       161 CLGLAKYLPQNAGDIARRYIRDPGLLKFIDIECFCWSVVPADQTPMINAGMVFSDRHYGGINYPKGGVGQIAESLVKGLE  240 (493)
T ss_pred             hhHHHHHhhccHHHHHHHhcCCHHHHHHHHHHHHhccCCCcccchhhhHHHhhcccccceEecCCChHHHHHHHHHHHHH
Confidence            22334455688999999999999999999887777665555778877666555444557889999999999999999999


Q ss_pred             HcCcEEEecceeeEEEEeCCeEEEEEeCCCCEEEcCEEEECCChhhHHhhccCCCCCChHHHHHHHhhccCCcEEEEEEe
Q 005832          398 DKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMG  477 (675)
Q Consensus       398 ~~Gv~v~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VI~A~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~  477 (675)
                      ++|++|+++++|++|..+++++.+|++.+|+++.||.||+|++++.++.+|++++.++...++..+.++.+++.+++|++
T Consensus       241 ~~G~~i~~~~~V~~I~~~~~~~~gv~~~~g~~~~ad~vV~a~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~s~s~~~~~l~  320 (493)
T TIGR02730       241 KHGGQIRYRARVTKIILENGKAVGVKLADGEKIYAKRIVSNATRWDTFGKLLKAENLPKKEKNWQRNYVKSPSFLSLHLG  320 (493)
T ss_pred             HCCCEEEeCCeeeEEEecCCcEEEEEeCCCCEEEcCEEEECCChHHHHHHhCCccccchhhHHHHhhccCCCceEEEEEE
Confidence            99999999999999999988999999999999999999999999999888998777776555555667788899999999


Q ss_pred             eccccCCCCCCccceeeccchhhhccCCCceEEecCCCCCCCCCCCCceEEEEEecccchhhccCChhhHHHHHHHHHHH
Q 005832          478 VKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADE  557 (675)
Q Consensus       478 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~w~~~~~~~~~~~ke~~~~~  557 (675)
                      ++.+..|.....|++++ ++|..+..+.+.+|+++|+..||+++|+|+++++++++.+..+|.++++++|++.|+++.++
T Consensus       321 l~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~v~~ps~~dps~aP~G~~~i~~~~~~~~~~w~~~~~~~y~~~k~~~~~~  399 (493)
T TIGR02730       321 VKADVLPPGTECHHILL-EDWTNLEKPQGTIFVSIPTLLDPSLAPEGHHIIHTFTPSSMEDWQGLSPKDYEAKKEADAER  399 (493)
T ss_pred             ecCccCCCCCCccEEec-chhhccCCCCCeEEEEeCCCCCCCCCcCCcEEEEEecCCChhhccCCCcHHHHHHHHHHHHH
Confidence            99876554444456555 34655555566789999999999999999999988888777889888888899999999999


Q ss_pred             HHHHHHHhhCCCCcCceEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEEeCCCccCCCChhHHh
Q 005832          558 IINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVA  637 (675)
Q Consensus       558 il~~L~~~~~P~l~~~i~~~~v~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~i~gLylaG~~~~pG~Gv~gA~  637 (675)
                      +++.|+ +++|+++++|+..++.||.|+++|++..+|.||..+...+.+...+|..+|+++|||+||+++|||+|++||+
T Consensus       400 il~~l~-~~~p~l~~~I~~~~~~TP~t~~r~~~~~~G~~G~~~~~~~~~~~~~~~~~t~i~gLyl~G~~~~pG~Gv~g~~  478 (493)
T TIGR02730       400 IIDRLE-KIFPGLDSAIDYKEVGTPRTHRRFLGRDSGTYGPIPRRTLPGLLPMPFNRTAIPGLYCVGDSCFPGQGLNAVA  478 (493)
T ss_pred             HHHHHH-HHCCChhhcEEEEEeeCchhHHHHhCCCCcccCCcccccccccccCCCCCCCCCCeEEecCcCCCCCCHHHHH
Confidence            999999 7899999999999999999999999999999987765443344433667899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhC
Q 005832          638 FSGVMCAHRVAADIG  652 (675)
Q Consensus       638 ~SG~~aA~~Il~~~g  652 (675)
                      .||+.||+.|++++|
T Consensus       479 ~sG~~~a~~i~~~~~  493 (493)
T TIGR02730       479 FSGFACAHRVAADLG  493 (493)
T ss_pred             HHHHHHHHHHHhhcC
Confidence            999999999998764

Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization.
>TIGR02734 crtI_fam phytoene desaturase Back     alignment and domain information
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD Back     alignment and domain information
>KOG4254 consensus Phytoene desaturase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02612 phytoene desaturase Back     alignment and domain information
>PLN02487 zeta-carotene desaturase Back     alignment and domain information
>PRK07233 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase Back     alignment and domain information
>PRK11883 protoporphyrinogen oxidase; Reviewed Back     alignment and domain information
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase Back     alignment and domain information
>TIGR02731 phytoene_desat phytoene desaturase Back     alignment and domain information
>PRK12416 protoporphyrinogen oxidase; Provisional Back     alignment and domain information
>PRK07208 hypothetical protein; Provisional Back     alignment and domain information
>PLN02268 probable polyamine oxidase Back     alignment and domain information
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism] Back     alignment and domain information
>PLN02576 protoporphyrinogen oxidase Back     alignment and domain information
>PLN02676 polyamine oxidase Back     alignment and domain information
>PLN02529 lysine-specific histone demethylase 1 Back     alignment and domain information
>PLN02568 polyamine oxidase Back     alignment and domain information
>TIGR03467 HpnE squalene-associated FAD-dependent desaturase Back     alignment and domain information
>PLN02328 lysine-specific histone demethylase 1 homolog Back     alignment and domain information
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO) Back     alignment and domain information
>PLN03000 amine oxidase Back     alignment and domain information
>PLN02976 amine oxidase Back     alignment and domain information
>COG1231 Monoamine oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG3349 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>PTZ00363 rab-GDP dissociation inhibitor; Provisional Back     alignment and domain information
>KOG1276 consensus Protoporphyrinogen oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 Back     alignment and domain information
>COG2907 Predicted NAD/FAD-binding protein [General function prediction only] Back     alignment and domain information
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase Back     alignment and domain information
>PRK13977 myosin-cross-reactive antigen; Provisional Back     alignment and domain information
>PRK11259 solA N-methyltryptophan oxidase; Provisional Back     alignment and domain information
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form Back     alignment and domain information
>PRK00711 D-amino acid dehydrogenase small subunit; Validated Back     alignment and domain information
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form Back     alignment and domain information
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional Back     alignment and domain information
>COG2081 Predicted flavoproteins [General function prediction only] Back     alignment and domain information
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK10157 putative oxidoreductase FixC; Provisional Back     alignment and domain information
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] Back     alignment and domain information
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases Back     alignment and domain information
>TIGR02032 GG-red-SF geranylgeranyl reductase family Back     alignment and domain information
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G Back     alignment and domain information
>PRK10015 oxidoreductase; Provisional Back     alignment and domain information
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated Back     alignment and domain information
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Back     alignment and domain information
>PLN02697 lycopene epsilon cyclase Back     alignment and domain information
>PRK06847 hypothetical protein; Provisional Back     alignment and domain information
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>KOG2844 consensus Dimethylglycine dehydrogenase precursor [Amino acid transport and metabolism] Back     alignment and domain information
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06185 hypothetical protein; Provisional Back     alignment and domain information
>PF00996 GDI: GDP dissociation inhibitor; InterPro: IPR018203 Rab proteins constitute a family of small GTPases that serve a regulatory role in vesicular membrane traffic [, ]; C-terminal geranylgeranylation is crucial for their membrane association and function Back     alignment and domain information
>COG0579 Predicted dehydrogenase [General function prediction only] Back     alignment and domain information
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase Back     alignment and domain information
>PRK09126 hypothetical protein; Provisional Back     alignment and domain information
>PRK11728 hydroxyglutarate oxidase; Provisional Back     alignment and domain information
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional Back     alignment and domain information
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase Back     alignment and domain information
>PLN02463 lycopene beta cyclase Back     alignment and domain information
>TIGR02028 ChlP geranylgeranyl reductase Back     alignment and domain information
>PLN00093 geranylgeranyl diphosphate reductase; Provisional Back     alignment and domain information
>PRK07045 putative monooxygenase; Reviewed Back     alignment and domain information
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364 Back     alignment and domain information
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>PTZ00383 malate:quinone oxidoreductase; Provisional Back     alignment and domain information
>PRK08244 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00292 thiazole biosynthesis enzyme Back     alignment and domain information
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional Back     alignment and domain information
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed Back     alignment and domain information
>TIGR02023 BchP-ChlP geranylgeranyl reductase Back     alignment and domain information
>PRK06481 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PRK08013 oxidoreductase; Provisional Back     alignment and domain information
>PRK07588 hypothetical protein; Provisional Back     alignment and domain information
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K Back     alignment and domain information
>PRK08274 tricarballylate dehydrogenase; Validated Back     alignment and domain information
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family Back     alignment and domain information
>KOG2853 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated Back     alignment and domain information
>TIGR01790 carotene-cycl lycopene cyclase family protein Back     alignment and domain information
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated Back     alignment and domain information
>PRK08132 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>TIGR02352 thiamin_ThiO glycine oxidase ThiO Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase Back     alignment and domain information
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PRK06753 hypothetical protein; Provisional Back     alignment and domain information
>PRK12842 putative succinate dehydrogenase; Reviewed Back     alignment and domain information
>PLN02464 glycerol-3-phosphate dehydrogenase Back     alignment and domain information
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PLN02985 squalene monooxygenase Back     alignment and domain information
>PRK07121 hypothetical protein; Validated Back     alignment and domain information
>PRK05257 malate:quinone oxidoreductase; Validated Back     alignment and domain information
>PRK13339 malate:quinone oxidoreductase; Reviewed Back     alignment and domain information
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK11445 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK06126 hypothetical protein; Provisional Back     alignment and domain information
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>TIGR01813 flavo_cyto_c flavocytochrome c Back     alignment and domain information
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2415 consensus Electron transfer flavoprotein ubiquinone oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins Back     alignment and domain information
>PRK08163 salicylate hydroxylase; Provisional Back     alignment and domain information
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial Back     alignment and domain information
>PRK06996 hypothetical protein; Provisional Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>PRK07538 hypothetical protein; Provisional Back     alignment and domain information
>PRK06134 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK06175 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK07190 hypothetical protein; Provisional Back     alignment and domain information
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6 Back     alignment and domain information
>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain Back     alignment and domain information
>PRK06184 hypothetical protein; Provisional Back     alignment and domain information
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK06834 hypothetical protein; Provisional Back     alignment and domain information
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated Back     alignment and domain information
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PLN02661 Putative thiazole synthesis Back     alignment and domain information
>PRK12834 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional Back     alignment and domain information
>PRK12843 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK07236 hypothetical protein; Provisional Back     alignment and domain information
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup Back     alignment and domain information
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional Back     alignment and domain information
>PRK06854 adenylylsulfate reductase subunit alpha; Validated Back     alignment and domain information
>TIGR00275 flavoprotein, HI0933 family Back     alignment and domain information
>PRK08294 phenol 2-monooxygenase; Provisional Back     alignment and domain information
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK07804 L-aspartate oxidase; Provisional Back     alignment and domain information
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only] Back     alignment and domain information
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit Back     alignment and domain information
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information
>PRK05868 hypothetical protein; Validated Back     alignment and domain information
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit Back     alignment and domain information
>PRK12839 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00367 squalene epoxidase; Provisional Back     alignment and domain information
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>PRK08275 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR00551 nadB L-aspartate oxidase Back     alignment and domain information
>PRK12810 gltD glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08401 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK07395 L-aspartate oxidase; Provisional Back     alignment and domain information
>KOG2852 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>PRK08626 fumarate reductase flavoprotein subunit; Provisional Back     alignment and domain information
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase Back     alignment and domain information
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated Back     alignment and domain information
>PRK08071 L-aspartate oxidase; Provisional Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>PLN02815 L-aspartate oxidase Back     alignment and domain information
>PRK06475 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK07512 L-aspartate oxidase; Provisional Back     alignment and domain information
>KOG1439 consensus RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02172 flavin-containing monooxygenase FMO GS-OX Back     alignment and domain information
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR03219 salicylate_mono salicylate 1-monooxygenase Back     alignment and domain information
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [] Back     alignment and domain information
>PRK09231 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit Back     alignment and domain information
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup Back     alignment and domain information
>TIGR02462 pyranose_ox pyranose oxidase Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>PRK09077 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism] Back     alignment and domain information
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR00136 gidA glucose-inhibited division protein A Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit Back     alignment and domain information
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional Back     alignment and domain information
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>PRK09897 hypothetical protein; Provisional Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan Back     alignment and domain information
>COG5044 MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK13984 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR01810 betA choline dehydrogenase Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>PRK02106 choline dehydrogenase; Validated Back     alignment and domain information
>COG3573 Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PF13454 NAD_binding_9: FAD-NAD(P)-binding Back     alignment and domain information
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism] Back     alignment and domain information
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] Back     alignment and domain information
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PLN02852 ferredoxin-NADP+ reductase Back     alignment and domain information
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PLN02785 Protein HOTHEAD Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>COG4716 Myosin-crossreactive antigen [Function unknown] Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>PTZ00188 adrenodoxin reductase; Provisional Back     alignment and domain information
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>KOG2665 consensus Predicted FAD-dependent oxidoreductase [Function unknown] Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>KOG3923 consensus D-aspartate oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed Back     alignment and domain information
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>TIGR01789 lycopene_cycl lycopene cyclase Back     alignment and domain information
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes [] Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>TIGR03862 flavo_PP4765 uncharacterized flavoprotein, PP_4765 family Back     alignment and domain information
>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1238 consensus Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [General function prediction only] Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B Back     alignment and domain information
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>PF07156 Prenylcys_lyase: Prenylcysteine lyase; InterPro: IPR010795 This entry represents a conserved region found in a group of prenylcysteine lyases (1 Back     alignment and domain information
>KOG1800 consensus Ferredoxin/adrenodoxin reductase [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>KOG2960 consensus Protein involved in thiamine biosynthesis and DNA damage tolerance [General function prediction only] Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] Back     alignment and domain information
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4405 consensus GDP dissociation inhibitor [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06249 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>PRK05708 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>KOG1346 consensus Programmed cell death 8 (apoptosis-inducing factor) [Signal transduction mechanisms] Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>PRK08229 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion] Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated Back     alignment and domain information
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 Back     alignment and domain information
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>KOG3851 consensus Sulfide:quinone oxidoreductase/flavo-binding protein [Energy production and conversion] Back     alignment and domain information
>PRK07417 arogenate dehydrogenase; Reviewed Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>KOG2755 consensus Oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK12549 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK00066 ldh L-lactate dehydrogenase; Reviewed Back     alignment and domain information
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional Back     alignment and domain information
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR01915 npdG NADPH-dependent F420 reductase Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PLN02353 probable UDP-glucose 6-dehydrogenase Back     alignment and domain information
>PRK06223 malate dehydrogenase; Reviewed Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase Back     alignment and domain information
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB Back     alignment and domain information
>PRK12810 gltD glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit Back     alignment and domain information
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] Back     alignment and domain information
>PRK12548 shikimate 5-dehydrogenase; Provisional Back     alignment and domain information
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional Back     alignment and domain information
>TIGR00507 aroE shikimate 5-dehydrogenase Back     alignment and domain information
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] Back     alignment and domain information
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>PTZ00117 malate dehydrogenase; Provisional Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial Back     alignment and domain information
>PRK07502 cyclohexadienyl dehydrogenase; Validated Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional Back     alignment and domain information
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional Back     alignment and domain information
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>PRK11559 garR tartronate semialdehyde reductase; Provisional Back     alignment and domain information
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) Back     alignment and domain information
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query675
4dgk_A501 Crystal Structure Of Phytoene Desaturase Crti From 2e-19
3ka7_A425 Crystal Structure Of An Oxidoreductase From Methano 2e-04
>pdb|4DGK|A Chain A, Crystal Structure Of Phytoene Desaturase Crti From Pantoea Ananatis Length = 501 Back     alignment and structure 
Iteration: 1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 199/511 (38%), Gaps = 45/511 (8%)
Query: 162 VIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGN 221
           VIG+G GGL  A +L   G  VL+LE+   PGG +  YE  G+TFD G +V+       +
Sbjct: 6   VIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVI------TD 59
Query: 222 LNLITQALAAVGCEM----EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
            + I +  A  G ++    E++P          +        + +   A++    P + E
Sbjct: 60  PSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVE 119
Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYI 337
           G   F      +F     L+L ++  P   F    +   +   L  +  ++  +    YI
Sbjct: 120 GYRQFLDYSRAVFKE-GYLKLGTV--PFLSFRDMLRAAPQLAKLQAW--RSVYSKVASYI 174
Query: 338 KDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFXXXXXXXXXXXXXAKSLAKGLA 397
           +D  L         +V   N   T  I   +   +R +              + + K   
Sbjct: 175 EDEHLRQAFSFHSLLVGG-NPFATSSIYTLIHALEREWGVWFPRGGTGAL-VQGMIKLFQ 232
Query: 398 DKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKE 457
           D G E++  A V+ +     K   V L DGR F  + + SNA    T+  LL   Q P  
Sbjct: 233 DLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS--QHPAA 290
Query: 458 EENFQKLYVK--APSFLSIHMGVKAEVLPPDTDCHHFV---------LEDDWNR--LEEP 504
            +   KL  K  + S   ++ G+       D   HH V         +++ +N   L E 
Sbjct: 291 VKQSNKLQTKRMSNSLFVLYFGLNHH---HDQLAHHTVCFGPRYRELIDEIFNHDGLAED 347
Query: 505 YGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLEN 564
           + S++L  P V DSSLAPEG      + + +     G A  D+  +   + D I   LE 
Sbjct: 348 F-SLYLHAPCVTDSSLAPEG---CGSYYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQ 403
Query: 565 KLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNT-TGINGLYCV 623
              PGL+  +    + +P   R  L    G+   +     +     P N    I  LY V
Sbjct: 404 HYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLV 463
Query: 624 GDSCFPGQGVIAVAFSGVMCAHRVAADIGLE 654
           G    PG G+      GV+ + +  A + LE
Sbjct: 464 GAGTHPGAGI-----PGVIGSAKATAGLMLE 489
>pdb|3KA7|A Chain A, Crystal Structure Of An Oxidoreductase From Methanosarcina Mazei. Northeast Structural Genomics Consortium Target Id Mar208 Length = 425 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query675
3ka7_A425 Oxidoreductase; structural genomics, PSI-2, protei 1e-122
3nrn_A421 Uncharacterized protein PF1083; alpha-beta protein 4e-95
1d5t_A433 Guanine nucleotide dissociation inhibitor; ultra-h 3e-32
3p1w_A475 Rabgdi protein; GDI RAB, malaria, structural genom 4e-26
2bcg_G453 Secretory pathway GDP dissociation inhibitor; RABG 5e-18
3utf_A513 UDP-galactopyranose mutase; nucleotide binding, fl 1e-15
2vvm_A495 Monoamine oxidase N; FAD, peroxisome, flavoprotein 3e-13
3k7m_X431 6-hydroxy-L-nicotine oxidase; enantiomeric substra 3e-13
4dsg_A484 UDP-galactopyranose mutase; rossmann fold, flavin 4e-13
3i6d_A470 Protoporphyrinogen oxidase; protein-inhibitor comp 9e-13
2b9w_A424 Putative aminooxidase; isomerase, conjugated linol 2e-12
1s3e_A520 Amine oxidase [flavin-containing] B; human monoami 3e-12
2yg5_A453 Putrescine oxidase; oxidoreductase, flavin; HET: F 4e-12
1rsg_A516 FMS1 protein; FAD binding motif, oxidoreductase; H 1e-10
1n4w_A504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 1e-10
1coy_A507 Cholesterol oxidase; oxidoreductase(oxygen recepto 2e-10
4at0_A510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 3e-10
1sez_A504 Protoporphyrinogen oxidase, mitochondrial; FAD-bin 3e-10
3lov_A475 Protoporphyrinogen oxidase; structural genomics, J 6e-10
1qo8_A566 Flavocytochrome C3 fumarate reductase; oxidoreduct 8e-10
1d4d_A572 Flavocytochrome C fumarate reductase; oxidoreducta 2e-09
2xag_A852 Lysine-specific histone demethylase 1; amine oxida 2e-09
2z3y_A662 Lysine-specific histone demethylase 1; chromatin, 2e-09
1y0p_A571 Fumarate reductase flavoprotein subunit; flavocyto 3e-09
2ivd_A478 PPO, PPOX, protoporphyrinogen oxidase; porphyrin b 7e-09
3nix_A421 Flavoprotein/dehydrogenase; structural genomics, P 1e-08
3e1t_A512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 1e-08
2uzz_A372 N-methyl-L-tryptophan oxidase; N-methyltryptophan 2e-08
3nks_A477 Protoporphyrinogen oxidase; FAD containing protein 2e-08
2iid_A498 L-amino-acid oxidase; flavoenzyme, FAD binding dom 2e-08
2oln_A397 NIKD protein; flavoprotein, rossmann fold, oxidore 4e-08
3pl8_A623 Pyranose 2-oxidase; substrate complex, H167A mutan 7e-08
2jae_A489 L-amino acid oxidase; oxidoreductase, dimerisation 8e-08
3atr_A453 Conserved archaeal protein; saturating double bond 1e-07
2gf3_A389 MSOX, monomeric sarcosine oxidase; flavoprotein ox 1e-07
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 2e-07
2bi7_A384 UDP-galactopyranose mutase; FAD, flavoprotein, iso 3e-07
3i3l_A591 Alkylhalidase CMLS; flavin-dependent halogenase, c 4e-07
3hdq_A397 UDP-galactopyranose mutase; substrate and inhibito 4e-07
1b37_A472 Protein (polyamine oxidase); flavin-dependent amin 4e-07
2hqm_A479 GR, grase, glutathione reductase; glutathione redu 4e-07
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 5e-07
1i8t_A367 UDP-galactopyranose mutase; rossman fold, FAD, con 7e-07
1ryi_A382 Glycine oxidase; flavoprotein, protein-inhibitor c 2e-06
1mo9_A523 ORF3; nucleotide binding motifs, nucleotide bindin 2e-06
1rp0_A284 ARA6, thiazole biosynthetic enzyme; protein ligand 4e-06
2gjc_A326 Thiazole biosynthetic enzyme, mitochondrial; gluta 5e-06
1onf_A500 GR, grase, glutathione reductase; oxidoreductase; 6e-06
3o0h_A484 Glutathione reductase; ssgcid, structur genomics, 6e-06
2r9z_A463 Glutathione amide reductase; NAD, FAD, substrate s 7e-06
3dk9_A478 Grase, GR, glutathione reductase; flavoenzyme, nic 7e-06
4dna_A463 Probable glutathione reductase; structural genomic 1e-05
3dje_A438 Fructosyl amine: oxygen oxidoreductase; fructosyl- 1e-05
1v0j_A399 UDP-galactopyranose mutase; flavoprotein, isomeras 1e-05
3jsk_A344 Cypbp37 protein; octameric thiazole synthase, bios 1e-05
3dgh_A483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 1e-05
2i0z_A447 NAD(FAD)-utilizing dehydrogenases; structural geno 2e-05
2x8g_A598 Thioredoxin glutathione reductase; redox-active ce 2e-05
3qfa_A519 Thioredoxin reductase 1, cytoplasmic; protein-prot 2e-05
1zk7_A467 HGII, reductase, mercuric reductase; mercuric ION 3e-05
1ges_A450 Glutathione reductase; oxidoreductase(flavoenzyme) 3e-05
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 3e-05
3dme_A369 Conserved exported protein; structural genomics, P 3e-05
1chu_A540 Protein (L-aspartate oxidase); flavoenzyme, NAD bi 3e-05
2cul_A232 Glucose-inhibited division protein A-related PROT 4e-05
2gqf_A401 Hypothetical protein HI0933; structural genomics, 5e-05
3v76_A417 Flavoprotein; structural genomics, PSI-biology, NE 6e-05
3dgz_A488 Thioredoxin reductase 2; oxidoreductase, rossmann, 6e-05
2gag_A 965 Heterotetrameric sarcosine oxidase alpha-subunit; 6e-05
1xdi_A499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 8e-05
2wpf_A495 Trypanothione reductase; oxidoreductase, trypanoso 8e-05
3uox_A545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 8e-05
1y56_B382 Sarcosine oxidase; dehydrogenase, protein-protein 8e-05
4fk1_A304 Putative thioredoxin reductase; structural genomic 9e-05
1c0p_A363 D-amino acid oxidase; alpha-beta-alpha motif, flav 1e-04
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 1e-04
1fec_A490 Trypanothione reductase; redox-active center, oxid 1e-04
3axb_A448 Putative oxidoreductase; dinucleotide-binding fold 1e-04
1dxl_A470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 2e-04
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 2e-04
4ap3_A549 Steroid monooxygenase; oxidoreductase, baeyer-vill 2e-04
1w4x_A542 Phenylacetone monooxygenase; baeyer-villiger, FAD; 2e-04
1y56_A493 Hypothetical protein PH1363; dehydrogenase, protei 2e-04
3urh_A491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 3e-04
2e1m_A376 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 3e-04
1v59_A478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 3e-04
3l8k_A466 Dihydrolipoyl dehydrogenase; redox-active center, 3e-04
2e5v_A472 L-aspartate oxidase; archaea, oxidoreductase; HET: 3e-04
2qae_A468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 3e-04
3c4n_A405 Uncharacterized protein DR_0571; alpha-beta protei 4e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
3ic9_A492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 5e-04
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 6e-04
2yqu_A455 2-oxoglutarate dehydrogenase E3 component; lipoami 6e-04
2vou_A397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 7e-04
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 7e-04
3lad_A476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 7e-04
2h88_A621 Succinate dehydrogenase flavoprotein subunit; comp 8e-04
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 8e-04
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 9e-04
2wdq_A588 Succinate dehydrogenase flavoprotein subunit; succ 9e-04
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} Length = 425 Back     alignment and structure
 Score =  368 bits (947), Expect = e-122
 Identities = 104/496 (20%), Positives = 174/496 (35%), Gaps = 81/496 (16%)

Query: 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSD 218
             +VIG+G+GGL++A +L+  G  V V E+  I GG        G+    G+  M     
Sbjct: 2   KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGP 61

Query: 219 KGNLNLITQALAAVGCEMEVIP-DPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKE 277
            G L    + +      + ++  + TTV   L                       P   +
Sbjct: 62  GGPLACFLKEV---EASVNIVRSEMTTVRVPLKKG-------------------NPDYVK 99

Query: 278 GVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNA--GNIARK 335
           G   F    +  F +L S            +    K  L  ++     P  +      + 
Sbjct: 100 G---FKDISFNDFPSLLS------------YKDRMKIALLIVSTRKNRPSGSSLQAWIKS 144

Query: 336 YIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDR-HFGGINYPVGGVGGIAKSLAK 394
            + D  L+ F D+ C    ++ + + P+     ++ +   FGG   P GG  GI  +L  
Sbjct: 145 QVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKGIIDALET 204

Query: 395 GLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQL 454
            ++  G +I     V+K+++E GKA G+ ++D R   A  +ISN     T          
Sbjct: 205 VISANGGKIHTGQEVSKILIENGKAAGI-IADDRIHDADLVISNLGHAATAVLC-----S 258

Query: 455 PKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDC-HHFVLEDDWNRLEEPYGSIFLSIP 513
               +     Y K    L    G+K  +   +    H  VL   + R         ++  
Sbjct: 259 EALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGHTGVLLTPYTR-----RINGVNEV 313

Query: 514 TVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQS 573
           T  D  LAP G H+       + E+ +           E   +  +  L+ ++FPG +  
Sbjct: 314 TQADPELAPPGKHLTMCHQYVAPENVK---------NLESEIEMGLEDLK-EIFPGKR-- 361

Query: 574 IAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQG- 632
                      +   L +      P+ R         P N T  +GLY VGD      G 
Sbjct: 362 -----------YEVLLIQSYHDEWPVNRA---ASGTDPGNETPFSGLYVVGDGAKGKGGI 407

Query: 633 -VIAVAFSGVMCAHRV 647
            V  VA   +    +V
Sbjct: 408 EVEGVALGVMSVMEKV 423
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus} Length = 421 Back     alignment and structure
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Length = 433 Back     alignment and structure
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7} Length = 475 Back     alignment and structure
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G* Length = 453 Back     alignment and structure
>3utf_A UDP-galactopyranose mutase; nucleotide binding, flavin adenine dinucleotide BIND isomerase; HET: FDA; 2.25A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A* Length = 513 Back     alignment and structure
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Length = 495 Back     alignment and structure
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A* Length = 431 Back     alignment and structure
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A* Length = 484 Back     alignment and structure
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis} Length = 470 Back     alignment and structure
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A* Length = 424 Back     alignment and structure
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ... Length = 520 Back     alignment and structure
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Length = 453 Back     alignment and structure
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Length = 516 Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Length = 507 Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Length = 510 Back     alignment and structure
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5 Length = 504 Back     alignment and structure
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum} Length = 475 Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Length = 566 Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Length = 572 Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852 Back     alignment and structure
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Length = 662 Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Length = 571 Back     alignment and structure
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A* Length = 478 Back     alignment and structure
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Length = 421 Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Length = 512 Back     alignment and structure
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli} Length = 372 Back     alignment and structure
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens} Length = 477 Back     alignment and structure
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A* Length = 498 Back     alignment and structure
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A* Length = 397 Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Length = 623 Back     alignment and structure
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Length = 489 Back     alignment and structure
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Length = 453 Back     alignment and structure
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A* Length = 389 Back     alignment and structure
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A* Length = 384 Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Length = 591 Back     alignment and structure
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A* Length = 397 Back     alignment and structure
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Length = 472 Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Length = 479 Back     alignment and structure
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7 Length = 367 Back     alignment and structure
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A* Length = 382 Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Length = 523 Back     alignment and structure
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 Length = 284 Back     alignment and structure
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} SCOP: c.3.1.6 PDB: 3fpz_A* Length = 326 Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Length = 500 Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Length = 484 Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Length = 463 Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Length = 478 Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Length = 463 Back     alignment and structure
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* Length = 438 Back     alignment and structure
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis} Length = 399 Back     alignment and structure
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa} Length = 344 Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Length = 483 Back     alignment and structure
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 Length = 447 Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Length = 598 Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Length = 519 Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Length = 467 Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Length = 450 Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Length = 297 Back     alignment and structure
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} Length = 369 Back     alignment and structure
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* Length = 540 Back     alignment and structure
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7 Length = 232 Back     alignment and structure
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1 Length = 401 Back     alignment and structure
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti} Length = 417 Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Length = 488 Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Length = 965 Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Length = 499 Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Length = 495 Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Length = 545 Back     alignment and structure
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Length = 382 Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Length = 304 Back     alignment and structure
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A* Length = 363 Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Length = 379 Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Length = 490 Back     alignment and structure
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A* Length = 448 Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Length = 470 Back     alignment and structure
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Length = 407 Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Length = 549 Back     alignment and structure
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A* Length = 542 Back     alignment and structure
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Length = 493 Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Length = 491 Back     alignment and structure
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Length = 376 Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Length = 478 Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Length = 466 Back     alignment and structure
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii} Length = 472 Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Length = 468 Back     alignment and structure
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1} Length = 405 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Length = 492 Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Length = 399 Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Length = 455 Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Length = 397 Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Length = 357 Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Length = 476 Back     alignment and structure
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... Length = 621 Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Length = 319 Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Length = 332 Back     alignment and structure
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* Length = 588 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query675
4dgk_A501 Phytoene dehydrogenase; the FAD/NAD(P)-binding ros 100.0
3ka7_A425 Oxidoreductase; structural genomics, PSI-2, protei 100.0
3nrn_A421 Uncharacterized protein PF1083; alpha-beta protein 100.0
1s3e_A520 Amine oxidase [flavin-containing] B; human monoami 100.0
2yg5_A453 Putrescine oxidase; oxidoreductase, flavin; HET: F 100.0
2ivd_A478 PPO, PPOX, protoporphyrinogen oxidase; porphyrin b 100.0
2vvm_A495 Monoamine oxidase N; FAD, peroxisome, flavoprotein 99.98
1sez_A504 Protoporphyrinogen oxidase, mitochondrial; FAD-bin 99.97
3i6d_A470 Protoporphyrinogen oxidase; protein-inhibitor comp 99.97
3nks_A477 Protoporphyrinogen oxidase; FAD containing protein 99.96
1b37_A472 Protein (polyamine oxidase); flavin-dependent amin 99.96
3lov_A475 Protoporphyrinogen oxidase; structural genomics, J 99.96
2bcg_G453 Secretory pathway GDP dissociation inhibitor; RABG 99.96
2jae_A489 L-amino acid oxidase; oxidoreductase, dimerisation 99.96
2iid_A498 L-amino-acid oxidase; flavoenzyme, FAD binding dom 99.95
1d5t_A433 Guanine nucleotide dissociation inhibitor; ultra-h 99.95
4gde_A513 UDP-galactopyranose mutase; flavin adenine dinucle 99.95
3k7m_X431 6-hydroxy-L-nicotine oxidase; enantiomeric substra 99.94
1rsg_A516 FMS1 protein; FAD binding motif, oxidoreductase; H 99.94
2z3y_A662 Lysine-specific histone demethylase 1; chromatin, 99.93
2xag_A852 Lysine-specific histone demethylase 1; amine oxida 99.93
2b9w_A424 Putative aminooxidase; isomerase, conjugated linol 99.92
4dsg_A484 UDP-galactopyranose mutase; rossmann fold, flavin 99.92
4gut_A776 Lysine-specific histone demethylase 1B; histone de 99.9
3ayj_A721 Pro-enzyme of L-phenylalanine oxidase; amino acid 99.89
3qj4_A342 Renalase; FAD/NAD(P)-binding rossmann fold superfa 99.89
3p1w_A475 Rabgdi protein; GDI RAB, malaria, structural genom 99.87
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 99.85
1vg0_A650 RAB proteins geranylgeranyltransferase component A 99.83
1v0j_A399 UDP-galactopyranose mutase; flavoprotein, isomeras 99.82
1i8t_A367 UDP-galactopyranose mutase; rossman fold, FAD, con 99.8
2bi7_A384 UDP-galactopyranose mutase; FAD, flavoprotein, iso 99.79
3dje_A438 Fructosyl amine: oxygen oxidoreductase; fructosyl- 99.67
3hdq_A397 UDP-galactopyranose mutase; substrate and inhibito 99.62
2e1m_A376 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 99.62
1y56_B382 Sarcosine oxidase; dehydrogenase, protein-protein 99.6
3nyc_A381 D-arginine dehydrogenase; FAD, imino-arginine, oxi 99.58
3ps9_A676 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 99.58
3oz2_A397 Digeranylgeranylglycerophospholipid reductase; str 99.57
3dme_A369 Conserved exported protein; structural genomics, P 99.57
1ryi_A382 Glycine oxidase; flavoprotein, protein-inhibitor c 99.56
2oln_A397 NIKD protein; flavoprotein, rossmann fold, oxidore 99.55
2gag_B405 Heterotetrameric sarcosine oxidase beta-subunit; f 99.55
3pvc_A689 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 99.54
3kkj_A336 Amine oxidase, flavin-containing; oxidoreductase, 99.52
2gf3_A389 MSOX, monomeric sarcosine oxidase; flavoprotein ox 99.5
2uzz_A372 N-methyl-L-tryptophan oxidase; N-methyltryptophan 99.5
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 99.44
3axb_A448 Putative oxidoreductase; dinucleotide-binding fold 99.43
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 99.41
1pj5_A 830 N,N-dimethylglycine oxidase; channelling, FAD bind 99.38
3nix_A421 Flavoprotein/dehydrogenase; structural genomics, P 99.38
3ihg_A 535 RDME; flavoenzyme, anthracycline, polyketide biosy 99.32
3atr_A453 Conserved archaeal protein; saturating double bond 99.32
4at0_A510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 99.3
3v76_A417 Flavoprotein; structural genomics, PSI-biology, NE 99.3
3i3l_A 591 Alkylhalidase CMLS; flavin-dependent halogenase, c 99.28
1qo8_A566 Flavocytochrome C3 fumarate reductase; oxidoreduct 99.28
1y0p_A571 Fumarate reductase flavoprotein subunit; flavocyto 99.27
2i0z_A447 NAD(FAD)-utilizing dehydrogenases; structural geno 99.25
2qa2_A 499 CABE, polyketide oxygenase CABE; FAD, angucycline, 99.25
3e1t_A 512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 99.22
3da1_A561 Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9 99.22
1d4d_A572 Flavocytochrome C fumarate reductase; oxidoreducta 99.2
3fmw_A 570 Oxygenase; mithramycin, baeyer-villiger, flavin bi 99.17
3nlc_A549 Uncharacterized protein VP0956; FAD-binding protei 99.16
2gqf_A401 Hypothetical protein HI0933; structural genomics, 99.15
3g3e_A351 D-amino-acid oxidase; FAD, flavoprotein, oxidoredu 99.14
2vdc_G456 Glutamate synthase [NADPH] small chain; oxidoreduc 99.14
1c0p_A363 D-amino acid oxidase; alpha-beta-alpha motif, flav 99.12
4hb9_A412 Similarities with probable monooxygenase; flavin, 99.1
2rgh_A571 Alpha-glycerophosphate oxidase; flavoprotein oxida 99.1
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 99.05
2qa1_A 500 PGAE, polyketide oxygenase PGAE; FAD, angucycline, 99.04
2wdq_A 588 Succinate dehydrogenase flavoprotein subunit; succ 99.04
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 99.03
2vou_A397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 99.02
2qcu_A501 Aerobic glycerol-3-phosphate dehydrogenase; glycer 99.01
1rp0_A284 ARA6, thiazole biosynthetic enzyme; protein ligand 99.0
2gmh_A 584 Electron transfer flavoprotein-ubiquinone oxidored 98.99
2bs2_A 660 Quinol-fumarate reductase flavoprotein subunit A; 98.97
2xdo_A398 TETX2 protein; tetracycline degradation, tigecycli 98.95
2bry_A497 NEDD9 interacting protein with calponin homology a 98.94
2h88_A 621 Succinate dehydrogenase flavoprotein subunit; comp 98.94
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 98.91
3c96_A410 Flavin-containing monooxygenase; FAD, oxidoreducta 98.91
2zxi_A 637 TRNA uridine 5-carboxymethylaminomethyl modificat 98.91
2gjc_A326 Thiazole biosynthetic enzyme, mitochondrial; gluta 98.89
1k0i_A394 P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h 98.89
3c4n_A405 Uncharacterized protein DR_0571; alpha-beta protei 98.89
3jsk_A344 Cypbp37 protein; octameric thiazole synthase, bios 98.88
4fk1_A304 Putative thioredoxin reductase; structural genomic 98.86
4ap3_A549 Steroid monooxygenase; oxidoreductase, baeyer-vill 98.86
3gwf_A 540 Cyclohexanone monooxygenase; flavoprotein biocatal 98.85
2cul_A232 Glucose-inhibited division protein A-related PROT 98.85
1chu_A540 Protein (L-aspartate oxidase); flavoenzyme, NAD bi 98.84
3ces_A 651 MNMG, tRNA uridine 5-carboxymethylaminomethyl modi 98.84
1kf6_A 602 Fumarate reductase flavoprotein; respiration, fuma 98.83
1jnr_A 643 Adenylylsulfate reductase; oxidoreductase; HET: FA 98.83
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 98.82
3cp8_A 641 TRNA uridine 5-carboxymethylaminomethyl modificati 98.82
3ab1_A360 Ferredoxin--NADP reductase; oxidoreductase, electr 98.81
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 98.81
2e5v_A472 L-aspartate oxidase; archaea, oxidoreductase; HET: 98.8
3lxd_A415 FAD-dependent pyridine nucleotide-disulphide oxido 98.79
3o0h_A484 Glutathione reductase; ssgcid, structur genomics, 98.78
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 98.77
1w4x_A542 Phenylacetone monooxygenase; baeyer-villiger, FAD; 98.77
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 98.76
3uox_A545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 98.73
2weu_A511 Tryptophan 5-halogenase; regioselectivity, antifun 98.72
3fg2_P404 Putative rubredoxin reductase; ferredoxin reductas 98.71
2r0c_A 549 REBC; flavin adenine dinucleotide, monooxygenase, 98.68
2aqj_A538 Tryptophan halogenase, pRNA; flavin-dependent halo 98.68
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 98.68
4dna_A463 Probable glutathione reductase; structural genomic 98.67
2ywl_A180 Thioredoxin reductase related protein; uncharacter 98.67
3gyx_A 662 Adenylylsulfate reductase; oxidoreductase; HET: FA 98.66
2gv8_A447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 98.66
2e4g_A550 Tryptophan halogenase; flavin-binding, rebeccamyci 98.65
1mo9_A523 ORF3; nucleotide binding motifs, nucleotide bindin 98.64
2q0l_A311 TRXR, thioredoxin reductase; bacterial thiredoxin 98.63
3r9u_A315 Thioredoxin reductase; structural genomics, center 98.63
1trb_A320 Thioredoxin reductase; oxidoreductase(flavoenzyme) 98.62
2dkh_A 639 3-hydroxybenzoate hydroxylase; flavoprotein, monoo 98.61
2q7v_A325 Thioredoxin reductase; rossman fold, FAD, flavopro 98.61
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 98.59
2pyx_A526 Tryptophan halogenase; structural genomics, JOI fo 98.59
3iwa_A472 FAD-dependent pyridine nucleotide-disulphide oxido 98.59
1xdi_A499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 98.57
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 98.57
1ges_A450 Glutathione reductase; oxidoreductase(flavoenzyme) 98.57
2r9z_A463 Glutathione amide reductase; NAD, FAD, substrate s 98.57
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 98.56
3lad_A476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 98.56
2wpf_A495 Trypanothione reductase; oxidoreductase, trypanoso 98.55
1y56_A493 Hypothetical protein PH1363; dehydrogenase, protei 98.52
1fec_A490 Trypanothione reductase; redox-active center, oxid 98.52
1vdc_A333 NTR, NADPH dependent thioredoxin reductase; hypoth 98.5
3oc4_A452 Oxidoreductase, pyridine nucleotide-disulfide FAM; 98.5
2a87_A335 TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TL 98.5
3fpz_A326 Thiazole biosynthetic enzyme; FAD, mitochondrion, 98.49
3s5w_A463 L-ornithine 5-monooxygenase; class B flavin depend 98.48
4b1b_A542 TRXR, thioredoxin reductase; oxidoreductase, FAD, 98.48
3qvp_A583 Glucose oxidase; oxidoreductase; HET: NAG BMA MAN 98.48
1dxl_A470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 98.47
1fl2_A310 Alkyl hydroperoxide reductase subunit F; reactive 98.46
2xve_A464 Flavin-containing monooxygenase; oxidoreductase; H 98.45
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 98.44
2cdu_A452 NADPH oxidase; flavoenzyme, oxidoreductase; HET: F 98.42
2qae_A468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 98.42
3ef6_A410 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) 98.39
3ics_A588 Coenzyme A-disulfide reductase; pyridine nucleotid 98.39
1ojt_A482 Surface protein; redox-active center, glycolysis, 98.38
1ebd_A455 E3BD, dihydrolipoamide dehydrogenase; redox-active 98.36
3h8l_A409 NADH oxidase; membrane protein, complete form, ros 98.35
3t37_A526 Probable dehydrogenase; BET alpha beta fold, ADP b 98.35
4gcm_A312 TRXR, thioredoxin reductase; FAD/NAD-linked reduct 98.3
3fim_B566 ARYL-alcohol oxidase; AAO, lignin degradation, oxi 98.3
1pn0_A 665 Phenol 2-monooxygenase; two dimers, TLS refinement 98.29
1n4w_A504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 98.27
4a5l_A314 Thioredoxin reductase; oxidoreductase, redox metab 98.24
3ntd_A565 FAD-dependent pyridine nucleotide-disulphide oxido 98.2
1coy_A507 Cholesterol oxidase; oxidoreductase(oxygen recepto 98.18
1q1r_A431 Putidaredoxin reductase; glutathione reductase fol 98.18
3klj_A385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 98.18
4g6h_A502 Rotenone-insensitive NADH-ubiquinone oxidoreducta 98.14
2jbv_A546 Choline oxidase; alcohol oxidation, flavoenyzme ox 98.13
3urh_A491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 98.03
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 98.02
2v3a_A384 Rubredoxin reductase; alkane degradation, NADH oxi 98.01
3sx6_A437 Sulfide-quinone reductase, putative; sulfide:quino 98.0
3l8k_A466 Dihydrolipoyl dehydrogenase; redox-active center, 97.98
1q1r_A431 Putidaredoxin reductase; glutathione reductase fol 97.97
2yqu_A455 2-oxoglutarate dehydrogenase E3 component; lipoami 97.95
3cgb_A480 Pyridine nucleotide-disulfide oxidoreductase, CLA; 97.94
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 97.93
3hyw_A430 Sulfide-quinone reductase; monotopic membrane prot 97.87
3qfa_A519 Thioredoxin reductase 1, cytoplasmic; protein-prot 97.87
1zk7_A467 HGII, reductase, mercuric reductase; mercuric ION 97.84
2eq6_A464 Pyruvate dehydrogenase complex, dihydrolipoamide d 97.82
1nhp_A447 NADH peroxidase; oxidoreductase (H2O2(A)); HET: FA 97.82
3dgz_A488 Thioredoxin reductase 2; oxidoreductase, rossmann, 97.81
1v59_A478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 97.8
4b63_A501 L-ornithine N5 monooxygenase; oxidoreductase, side 97.8
2yqu_A455 2-oxoglutarate dehydrogenase E3 component; lipoami 97.8
1zmd_A474 Dihydrolipoyl dehydrogenase; lipoamide dehydrogena 97.79
2gqw_A408 Ferredoxin reductase; flavoprotein, oxidoreductase 97.79
2hqm_A479 GR, grase, glutathione reductase; glutathione redu 97.79
3ihm_A430 Styrene monooxygenase A; rossman fold, anti-parall 97.79
3dk9_A478 Grase, GR, glutathione reductase; flavoenzyme, nic 97.78
2e1m_C181 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 97.76
3ic9_A492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 97.75
3dgh_A483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 97.74
3pl8_A623 Pyranose 2-oxidase; substrate complex, H167A mutan 97.72
2hqm_A479 GR, grase, glutathione reductase; glutathione redu 97.71
3c4a_A381 Probable tryptophan hydroxylase VIOD; alpha-beta p 97.71
1ps9_A671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 97.7
1ebd_A455 E3BD, dihydrolipoamide dehydrogenase; redox-active 97.7
1onf_A500 GR, grase, glutathione reductase; oxidoreductase; 97.68
1lvl_A458 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 97.67
1onf_A500 GR, grase, glutathione reductase; oxidoreductase; 97.67
1v59_A478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 97.64
2bc0_A490 NADH oxidase; flavoprotein, pyridine nucleotide di 97.63
2eq6_A464 Pyruvate dehydrogenase complex, dihydrolipoamide d 97.63
2a8x_A464 Dihydrolipoyl dehydrogenase, E3 component of alpha 97.6
1ojt_A482 Surface protein; redox-active center, glycolysis, 97.58
1zmd_A474 Dihydrolipoyl dehydrogenase; lipoamide dehydrogena 97.53
3g5s_A443 Methylenetetrahydrofolate--tRNA-(uracil-5-)- methy 97.52
1m6i_A493 Programmed cell death protein 8; apoptosis, AIF, o 97.5
3cgb_A480 Pyridine nucleotide-disulfide oxidoreductase, CLA; 97.49
2a8x_A464 Dihydrolipoyl dehydrogenase, E3 component of alpha 97.49
1lvl_A458 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 97.48
1lqt_A456 FPRA; NADP+ derivative, oxidoreductase, structural 97.47
2qae_A468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 97.45
2gag_A 965 Heterotetrameric sarcosine oxidase alpha-subunit; 97.44
2x8g_A598 Thioredoxin glutathione reductase; redox-active ce 97.44
3q9t_A577 Choline dehydrogenase and related flavoproteins; g 97.43
3kd9_A449 Coenzyme A disulfide reductase; PSI-II, NYSGXRC, o 97.39
1zk7_A467 HGII, reductase, mercuric reductase; mercuric ION 97.39
3urh_A491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 97.38
1dxl_A470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 97.36
1kdg_A546 CDH, cellobiose dehydrogenase; GMC oxidoreductase, 97.36
1cjc_A460 Protein (adrenodoxin reductase); flavoenzyme, MAD 97.35
3dgh_A483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 97.34
3h28_A430 Sulfide-quinone reductase; monotopic membrane prot 97.32
1xhc_A367 NADH oxidase /nitrite reductase; southe collaborat 97.3
2gqw_A408 Ferredoxin reductase; flavoprotein, oxidoreductase 97.3
3ic9_A492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 97.28
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 97.26
2bc0_A490 NADH oxidase; flavoprotein, pyridine nucleotide di 97.25
2v3a_A384 Rubredoxin reductase; alkane degradation, NADH oxi 97.22
1nhp_A447 NADH peroxidase; oxidoreductase (H2O2(A)); HET: FA 97.21
3ab1_A360 Ferredoxin--NADP reductase; oxidoreductase, electr 97.21
1m6i_A493 Programmed cell death protein 8; apoptosis, AIF, o 97.19
1ju2_A536 HydroxynitrIle lyase; flavin, GMC oxidoreductase, 97.19
3uox_A545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 97.19
3dk9_A478 Grase, GR, glutathione reductase; flavoenzyme, nic 97.18
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 97.16
3dgz_A488 Thioredoxin reductase 2; oxidoreductase, rossmann, 97.15
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 97.14
3gwf_A540 Cyclohexanone monooxygenase; flavoprotein biocatal 97.12
2q0l_A311 TRXR, thioredoxin reductase; bacterial thiredoxin 97.12
4eqs_A437 Coenzyme A disulfide reductase; oxidoreductase; HE 97.09
1xhc_A367 NADH oxidase /nitrite reductase; southe collaborat 97.07
1fl2_A310 Alkyl hydroperoxide reductase subunit F; reactive 97.03
4ap3_A549 Steroid monooxygenase; oxidoreductase, baeyer-vill 96.94
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 96.94
4eqs_A437 Coenzyme A disulfide reductase; oxidoreductase; HE 96.92
3s5w_A463 L-ornithine 5-monooxygenase; class B flavin depend 96.8
3vrd_B401 FCCB subunit, flavocytochrome C flavin subunit; su 96.8
3kd9_A449 Coenzyme A disulfide reductase; PSI-II, NYSGXRC, o 96.8
2x8g_A598 Thioredoxin glutathione reductase; redox-active ce 96.78
2q7v_A325 Thioredoxin reductase; rossman fold, FAD, flavopro 96.76
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 96.68
1vdc_A333 NTR, NADPH dependent thioredoxin reductase; hypoth 96.67
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 96.63
1gpe_A587 Protein (glucose oxidase); oxidoreductase(flavopro 96.61
3qfa_A519 Thioredoxin reductase 1, cytoplasmic; protein-prot 96.57
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 96.56
3l8k_A466 Dihydrolipoyl dehydrogenase; redox-active center, 96.54
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 96.44
2gag_A 965 Heterotetrameric sarcosine oxidase alpha-subunit; 95.7
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 95.64
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 95.46
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 94.99
1lss_A140 TRK system potassium uptake protein TRKA homolog; 94.85
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 94.59
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 94.19
3klj_A385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 94.05
3dfz_A223 SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase 94.02
4gcm_A312 TRXR, thioredoxin reductase; FAD/NAD-linked reduct 93.9
1id1_A153 Putative potassium channel protein; RCK domain, E. 93.74
2e1m_B130 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 93.34
3c85_A183 Putative glutathione-regulated potassium-efflux S 93.16
2x5o_A439 UDP-N-acetylmuramoylalanine--D-glutamate ligase; A 93.15
3ado_A319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 93.14
3lk7_A451 UDP-N-acetylmuramoylalanine--D-glutamate ligase; a 92.93
4a5l_A314 Thioredoxin reductase; oxidoreductase, redox metab 92.92
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 92.86
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 92.82
1ges_A450 Glutathione reductase; oxidoreductase(flavoenzyme) 92.65
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 92.65
1kdg_A546 CDH, cellobiose dehydrogenase; GMC oxidoreductase, 92.65
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 92.08
2r9z_A463 Glutathione amide reductase; NAD, FAD, substrate s 91.98
3i83_A320 2-dehydropantoate 2-reductase; structural genomics 91.84
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 91.73
1zej_A293 HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural 91.53
2ewd_A317 Lactate dehydrogenase,; protein-substrate_cofactor 91.47
1pzg_A331 LDH, lactate dehydrogenase; apicomplexa, APAD, tet 91.42
3ef6_A410 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) 91.34
3hn2_A312 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str 91.19
3doj_A310 AT3G25530, dehydrogenase-like protein; gamma-hydro 91.17
1ks9_A291 KPA reductase;, 2-dehydropantoate 2-reductase; PAN 91.14
2raf_A209 Putative dinucleotide-binding oxidoreductase; NP_7 91.12
2y0c_A478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 91.01
2ew2_A316 2-dehydropantoate 2-reductase, putative; alpha-str 90.88
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 90.81
3gg2_A450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 90.59
3k6j_A460 Protein F01G10.3, confirmed by transcript evidenc; 90.59
3eag_A326 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME 90.46
3vtf_A444 UDP-glucose 6-dehydrogenase; two discrete alpha/be 90.43
3g79_A478 NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; 90.32
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 90.27
1lld_A319 L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N 90.26
1bg6_A359 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L 90.25
3g0o_A303 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine 90.25
3ghy_A335 Ketopantoate reductase protein; oxidoreductase, NA 90.19
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 90.02
3qha_A296 Putative oxidoreductase; seattle structural genomi 89.99
4a7p_A446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 89.9
1t2d_A322 LDH-P, L-lactate dehydrogenase; ternary complex, o 89.89
2cdu_A452 NADPH oxidase; flavoenzyme, oxidoreductase; HET: F 89.8
3g17_A294 Similar to 2-dehydropantoate 2-reductase; structur 89.79
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 89.78
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 89.72
3lxd_A415 FAD-dependent pyridine nucleotide-disulphide oxido 89.66
1kyq_A274 Met8P, siroheme biosynthesis protein Met8; homodim 89.65
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 89.62
4g65_A461 TRK system potassium uptake protein TRKA; structur 89.6
3pid_A432 UDP-glucose 6-dehydrogenase; rossmann fold, oxidor 89.52
3ntd_A565 FAD-dependent pyridine nucleotide-disulphide oxido 89.5
1zcj_A463 Peroxisomal bifunctional enzyme; peroxisomal multi 89.44
3pef_A287 6-phosphogluconate dehydrogenase, NAD-binding; gam 89.41
2hjr_A328 Malate dehydrogenase; malaria, structural genomics 89.35
3fg2_P404 Putative rubredoxin reductase; ferredoxin reductas 89.33
3l6d_A306 Putative oxidoreductase; structural genomics, prot 89.16
2xve_A464 Flavin-containing monooxygenase; oxidoreductase; H 89.09
1trb_A320 Thioredoxin reductase; oxidoreductase(flavoenzyme) 89.04
1pjq_A457 CYSG, siroheme synthase; rossman fold, nucleotide 89.02
1mv8_A436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 88.85
2a87_A335 TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TL 88.83
4dll_A320 2-hydroxy-3-oxopropionate reductase; structural ge 88.74
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 88.68
4b1b_A542 TRXR, thioredoxin reductase; oxidoreductase, FAD, 88.66
3oc4_A452 Oxidoreductase, pyridine nucleotide-disulfide FAM; 88.65
3tl2_A315 Malate dehydrogenase; center for structural genomi 88.58
3ego_A307 Probable 2-dehydropantoate 2-reductase; structural 88.47
2v6b_A304 L-LDH, L-lactate dehydrogenase; oxidoreductase, ra 88.37
3lad_A476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 88.32
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 88.26
2wpf_A495 Trypanothione reductase; oxidoreductase, trypanoso 88.24
2uyy_A316 N-PAC protein; long-chain dehydrogenase, cytokine; 88.17
3hwr_A318 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A 88.12
2vns_A215 Metalloreductase steap3; metal-binding, transmembr 88.12
1fec_A490 Trypanothione reductase; redox-active center, oxid 88.1
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 88.05
1nyt_A271 Shikimate 5-dehydrogenase; alpha/beta domains, WID 88.02
3l9w_A413 Glutathione-regulated potassium-efflux system Pro 87.98
3pdu_A287 3-hydroxyisobutyrate dehydrogenase family protein; 87.98
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 87.83
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 87.72
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 87.71
2q3e_A467 UDP-glucose 6-dehydrogenase; hexamer, structural g 87.55
3cky_A301 2-hydroxymethyl glutarate dehydrogenase; rossmann 87.51
3mog_A483 Probable 3-hydroxybutyryl-COA dehydrogenase; struc 87.49
2gv8_A447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 87.44
3phh_A269 Shikimate dehydrogenase; shikimate pathway, helico 87.4
3gvi_A324 Malate dehydrogenase; NAD, oxidoreductase, tricarb 87.38
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 87.37
2vdc_G456 Glutamate synthase [NADPH] small chain; oxidoreduc 87.35
1evy_A366 Glycerol-3-phosphate dehydrogenase; rossmann fold, 87.33
3ics_A588 Coenzyme A-disulfide reductase; pyridine nucleotid 87.28
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 87.27
1y6j_A318 L-lactate dehydrogenase; southeast collaboratory f 87.12
1guz_A310 Malate dehydrogenase; oxidoreductase, tricarboxyli 87.09
1mo9_A523 ORF3; nucleotide binding motifs, nucleotide bindin 87.08
4ezb_A317 Uncharacterized conserved protein; structural geno 87.01
2qyt_A317 2-dehydropantoate 2-reductase; APC81190, porphyrom 86.89
1jay_A212 Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma 86.84
1ur5_A309 Malate dehydrogenase; oxidoreductase, tricarboxyli 86.65
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 86.64
3pqe_A326 L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas 86.6
3qsg_A312 NAD-binding phosphogluconate dehydrogenase-like P; 86.6
1xdi_A499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 86.6
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 86.38
1p77_A272 Shikimate 5-dehydrogenase; NADPH, oxidoreductase; 86.33
3iwa_A472 FAD-dependent pyridine nucleotide-disulphide oxido 86.26
1dlj_A402 UDP-glucose dehydrogenase; rossmann fold, ternary 86.2
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 86.16
2pv7_A298 T-protein [includes: chorismate mutase (EC 5.4.99 86.02
3r9u_A315 Thioredoxin reductase; structural genomics, center 85.91
3dfu_A232 Uncharacterized protein from 6-phosphogluconate de 85.89
2egg_A297 AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff 85.85
1a5z_A319 L-lactate dehydrogenase; oxidoreductase, glycolysi 85.82
3ojo_A431 CAP5O; rossmann fold, complex with cofactor NAD an 85.8
4huj_A220 Uncharacterized protein; PSI-biology, nysgrc, stru 85.76
3ggo_A314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 85.71
2f1k_A279 Prephenate dehydrogenase; tyrosine synthesis, X-RA 85.54
3vrd_B401 FCCB subunit, flavocytochrome C flavin subunit; su 85.5
3ktd_A341 Prephenate dehydrogenase; structural genomics, joi 85.48
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 85.33
1yqg_A263 Pyrroline-5-carboxylate reductase; structural geno 85.33
3p7m_A321 Malate dehydrogenase; putative dehydrogenase, enzy 85.25
3e8x_A236 Putative NAD-dependent epimerase/dehydratase; stru 85.2
4gwg_A484 6-phosphogluconate dehydrogenase, decarboxylating; 85.19
3ldh_A330 Lactate dehydrogenase; oxidoreductase, CHOH donor, 85.16
2wtb_A725 MFP2, fatty acid multifunctional protein (ATMFP2); 85.15
3gpi_A286 NAD-dependent epimerase/dehydratase; structural ge 85.13
3h28_A430 Sulfide-quinone reductase; monotopic membrane prot 85.1
4dna_A463 Probable glutathione reductase; structural genomic 85.1
2zyd_A480 6-phosphogluconate dehydrogenase, decarboxylating; 85.06
3o0h_A484 Glutathione reductase; ssgcid, structur genomics, 85.04
2o3j_A481 UDP-glucose 6-dehydrogenase; structural genomics, 84.97
1oju_A294 MDH, malate dehydrogenase; hyperthermophilic, oxid 84.95
2p4q_A497 6-phosphogluconate dehydrogenase, decarboxylating; 84.91
2izz_A322 Pyrroline-5-carboxylate reductase 1; amino-acid bi 84.89
4ffl_A363 PYLC; amino acid, biosynthesis of pyrrolysine, iso 84.86
3ew7_A221 LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend 84.83
2gf2_A296 Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct 84.63
1hyh_A309 L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 84.62
1ju2_A536 HydroxynitrIle lyase; flavin, GMC oxidoreductase, 84.37
2i6t_A303 Ubiquitin-conjugating enzyme E2-like isoform A; L- 84.35
4gbj_A297 6-phosphogluconate dehydrogenase NAD-binding; stru 84.18
3c24_A286 Putative oxidoreductase; YP_511008.1, structural g 84.15
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 84.1
1ldn_A316 L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA 84.09
2rcy_A262 Pyrroline carboxylate reductase; malaria, structur 84.07
3ond_A488 Adenosylhomocysteinase; plant protein, enzyme-subs 84.05
1vpd_A299 Tartronate semialdehyde reductase; structural geno 84.01
3nep_X314 Malate dehydrogenase; halophIle, molecular adpatat 83.95
3fpz_A326 Thiazole biosynthetic enzyme; FAD, mitochondrion, 83.86
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 83.86
3tnl_A315 Shikimate dehydrogenase; structural genomics, cent 83.85
3h2s_A224 Putative NADH-flavin reductase; Q03B84, NESG, LCR1 83.73
4aj2_A331 L-lactate dehydrogenase A chain; oxidoreductase-in 83.71
3ius_A286 Uncharacterized conserved protein; APC63810, silic 83.69
3q9t_A577 Choline dehydrogenase and related flavoproteins; g 83.66
2pgd_A482 6-phosphogluconate dehydrogenase; oxidoreductase ( 83.52
2rir_A300 Dipicolinate synthase, A chain; structural genomic 83.48
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 83.45
3vku_A326 L-LDH, L-lactate dehydrogenase; rossmann fold, NAD 83.35
3gt0_A247 Pyrroline-5-carboxylate reductase; structural geno 83.33
3dhn_A227 NAD-dependent epimerase/dehydratase; reductase, PF 83.33
1wdk_A715 Fatty oxidation complex alpha subunit; alpha2BETA2 83.32
3jyo_A283 Quinate/shikimate dehydrogenase; enzyme-cofactor c 83.29
3d0o_A317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 83.23
2hk9_A275 Shikimate dehydrogenase; shikimate pathway, drug d 83.15
2g5c_A281 Prephenate dehydrogenase; TYRA, oxidoreductase; HE 83.12
1hdo_A206 Biliverdin IX beta reductase; foetal metabolism, H 83.11
3don_A277 Shikimate dehydrogenase; alpha-beta structure, ros 83.1
3u62_A253 Shikimate dehydrogenase; shikimate pathway, oxidor 83.08
3fbt_A282 Chorismate mutase and shikimate 5-dehydrogenase fu 83.08
3pwz_A272 Shikimate dehydrogenase 3; alpha-beta, oxidoreduct 82.91
2aef_A234 Calcium-gated potassium channel MTHK; rossmann fol 82.68
2cvz_A289 Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; 82.65
4b4o_A298 Epimerase family protein SDR39U1; isomerase; HET: 82.59
4id9_A347 Short-chain dehydrogenase/reductase; putative dehy 82.55
1edz_A320 5,10-methylenetetrahydrofolate dehydrogenase; nucl 82.47
1pgj_A478 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o 82.42
3hyw_A430 Sulfide-quinone reductase; monotopic membrane prot 82.41
3tri_A280 Pyrroline-5-carboxylate reductase; amino acid bios 82.4
3o8q_A281 Shikimate 5-dehydrogenase I alpha; structural geno 82.33
2ahr_A259 Putative pyrroline carboxylate reductase; pyrrolin 82.08
3c7a_A404 Octopine dehydrogenase; L) stereospecific opine de 82.04
3d1l_A266 Putative NADP oxidoreductase BF3122; structural ge 81.95
2qrj_A394 Saccharopine dehydrogenase, NAD+, L-lysine- formin 81.83
1ez4_A318 Lactate dehydrogenase; rossmann fold, oxidoreducta 81.71
1i36_A264 Conserved hypothetical protein MTH1747; NADP bindi 81.7
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 81.69
3t4e_A312 Quinate/shikimate dehydrogenase; structural genomi 81.65
1yb4_A295 Tartronic semialdehyde reductase; structural genom 81.65
3pl8_A623 Pyranose 2-oxidase; substrate complex, H167A mutan 81.52
1lu9_A287 Methylene tetrahydromethanopterin dehydrogenase; a 81.5
1nvt_A287 Shikimate 5'-dehydrogenase; structural genomics, P 81.42
1zud_1251 Adenylyltransferase THIF; thiamin, thiazole, prote 81.25
1leh_A364 Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi 81.18
3zwc_A742 Peroxisomal bifunctional enzyme; beta oxidation pa 81.12
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 80.96
2pzm_A330 Putative nucleotide sugar epimerase/ dehydratase; 80.93
2iz1_A474 6-phosphogluconate dehydrogenase, decarboxylating; 80.67
2d5c_A263 AROE, shikimate 5-dehydrogenase; substrate, dimer, 80.67
1gpe_A587 Protein (glucose oxidase); oxidoreductase(flavopro 80.64
3rui_A340 Ubiquitin-like modifier-activating enzyme ATG7; au 80.61
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 80.49
1np3_A338 Ketol-acid reductoisomerase; A DEEP figure-OF-eigh 80.36
3vps_A321 TUNA, NAD-dependent epimerase/dehydratase; tunicam 80.32
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis} Back     alignment and structure
Probab=100.00  E-value=3.2e-57  Score=506.88  Aligned_cols=477  Identities=25%  Similarity=0.354  Sum_probs=319.2

Q ss_pred             ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCCcceeEeeCCeEEccccccccCCCCCCchHHHHHHHHHcCCc--
Q 005832          158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCE--  235 (675)
Q Consensus       158 ~~~~iig~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lGl~--  235 (675)
                      ++|||||||++||+||++|+++|++|+|||+++.+||+++|++++|+.||.|++++.      .+..+.++++.+|..  
T Consensus         2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~------~~~~~~~l~~~~g~~~~   75 (501)
T 4dgk_A            2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVIT------DPSAIEELFALAGKQLK   75 (501)
T ss_dssp             CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBS------CTHHHHHHHHTTTCCGG
T ss_pred             CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeec------CchhHHHHHHHhcchhh
Confidence            579999999999999999999999999999999999999999999999999999886      345677888888754  


Q ss_pred             --eeEeeCCCeEEEEcCCCeEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHHHhhhhc
Q 005832          236 --MEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFK  313 (675)
Q Consensus       236 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (675)
                        ++..+......+.+++|..+.++.+...+.+.+.+.+|.+.+++.+|++.....+..... ...  ..+...+..+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~  152 (501)
T 4dgk_A           76 EYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYL-KLG--TVPFLSFRDMLR  152 (501)
T ss_dssp             GTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC---C--CCCCCCHHHHHH
T ss_pred             hceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhh-hcc--ccccchhhhhhh
Confidence              334555556677789999999999999999999999999999998888766554321110 000  000000011111


Q ss_pred             ChhhhhHHhhhccccHHHHHHHhCCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHHHhhcCcccccCCCHHHHHHHHH
Q 005832          314 RPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLA  393 (675)
Q Consensus       314 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~p~gG~~~l~~~L~  393 (675)
                      .......+  ....++.+.+.+++.++.++.++...+.+.+ ..+...++.+..+... ....|.++|+||++.|+++|+
T Consensus       153 ~~~~~~~l--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g-~~p~~~~~~~~~~~~~-~~~~G~~~p~GG~~~l~~aL~  228 (501)
T 4dgk_A          153 AAPQLAKL--QAWRSVYSKVASYIEDEHLRQAFSFHSLLVG-GNPFATSSIYTLIHAL-EREWGVWFPRGGTGALVQGMI  228 (501)
T ss_dssp             SGGGTTTS--HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH-SCC--CCCTHHHHHHH-HSCCCEEEETTHHHHHHHHHH
T ss_pred             hhhhhhhh--hhcccHHHHHHHHhccHHHHhhhhhhhcccC-CCcchhhhhhhhhhhh-hccCCeEEeCCCCcchHHHHH
Confidence            10000000  0113567888999999999999988776655 4566666554443332 344678899999999999999


Q ss_pred             HHHHHcCcEEEecceeeEEEEeCCeEEEEEeCCCCEEEcCEEEECCChhhHHhhccCCCCCChHHHHHHHhhccCCcEEE
Q 005832          394 KGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLS  473 (675)
Q Consensus       394 ~~l~~~Gv~v~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VI~A~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~  473 (675)
                      +.++++|++|++|++|++|+.+++++++|+++||+++.||.||+|++++.++..|+++...+....+.+..++.+++.++
T Consensus       229 ~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~~~  308 (501)
T 4dgk_A          229 KLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLFV  308 (501)
T ss_dssp             HHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------------------------CCEEEE
T ss_pred             HHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCceeE
Confidence            99999999999999999999999999999999999999999999999999988899877777666666677778889999


Q ss_pred             EEEeeccccCCCCCCccceeeccchhhh-cc--------CCCceEEecCCCCCCCCCCCCceEEEEEecccchhhccCCh
Q 005832          474 IHMGVKAEVLPPDTDCHHFVLEDDWNRL-EE--------PYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQ  544 (675)
Q Consensus       474 v~l~l~~~~~p~~~~~~~~~~~~~~~~~-~~--------~~~~i~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~w~~~~~  544 (675)
                      ++++++.+.  +....|++++..++... +.        ....+|+++++..||+++|+|+++++++++.+...|.   +
T Consensus       309 ~~~~l~~~~--~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~---~  383 (501)
T 4dgk_A          309 LYFGLNHHH--DQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTA---N  383 (501)
T ss_dssp             EEEEESSCC--TTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTS---C
T ss_pred             EEecccCCc--cccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccc---c
Confidence            999999875  33445666666554321 11        1135789999999999999999999998877654443   4


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhCCCCcCceEEEEecChhHHHHHhcCCCCc-ccCCCCCCCCCCCCCCCC-CCCCCcEEE
Q 005832          545 KDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGT-YGPMPRGTPKGLLGMPFN-TTGINGLYC  622 (675)
Q Consensus       545 ~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~v~tP~~~~~~~~~~~G~-yg~~p~~~~~~~~~~p~~-~t~i~gLyl  622 (675)
                      .+|++.++++.+++++.|+++++|+++++|+..++.||.||+++++.++|. ||..|...+..+ .||.. .|+++|||+
T Consensus       384 ~~~~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~-~RP~~~~t~i~gLyl  462 (501)
T 4dgk_A          384 LDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAW-FRPHNRDKTITNLYL  462 (501)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC-------------------------------CCTTEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccc-cCCCCCCCCCCCEEE
Confidence            468889999999999999855789999999999999999999999888875 776555444333 35644 589999999


Q ss_pred             eCCCccCCCChhHHhhhHHHHHHHHHHHhCC
Q 005832          623 VGDSCFPGQGVIAVAFSGVMCAHRVAADIGL  653 (675)
Q Consensus       623 aG~~~~pG~Gv~gA~~SG~~aA~~Il~~~g~  653 (675)
                      ||++||||+||+||+.||++||++|++|+.-
T Consensus       463 ~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~g  493 (501)
T 4dgk_A          463 VGAGTHPGAGIPGVIGSAKATAGLMLEDLIG  493 (501)
T ss_dssp             CCCH------HHHHHHHHHHHHHHHHHHHC-
T ss_pred             ECCCCCCcccHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999854
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} Back     alignment and structure
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus} Back     alignment and structure
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ... Back     alignment and structure
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Back     alignment and structure
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A* Back     alignment and structure
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Back     alignment and structure
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5 Back     alignment and structure
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis} Back     alignment and structure
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens} Back     alignment and structure
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Back     alignment and structure
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum} Back     alignment and structure
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G* Back     alignment and structure
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Back     alignment and structure
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A* Back     alignment and structure
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Back     alignment and structure
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A* Back     alignment and structure
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A* Back     alignment and structure
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Back     alignment and structure
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Back     alignment and structure
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A* Back     alignment and structure
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A* Back     alignment and structure
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A* Back     alignment and structure
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A* Back     alignment and structure
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens} Back     alignment and structure
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7} Back     alignment and structure
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R* Back     alignment and structure
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis} Back     alignment and structure
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7 Back     alignment and structure
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A* Back     alignment and structure
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* Back     alignment and structure
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A* Back     alignment and structure
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A* Back     alignment and structure
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* Back     alignment and structure
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum} Back     alignment and structure
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} Back     alignment and structure
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A* Back     alignment and structure
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A* Back     alignment and structure
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B* Back     alignment and structure
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* Back     alignment and structure
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A* Back     alignment and structure
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli} Back     alignment and structure
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A* Back     alignment and structure
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Back     alignment and structure
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A* Back     alignment and structure
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Back     alignment and structure
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Back     alignment and structure
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Back     alignment and structure
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti} Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Back     alignment and structure
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 Back     alignment and structure
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces} Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Back     alignment and structure
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans} Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Back     alignment and structure
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus} Back     alignment and structure
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus} Back     alignment and structure
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1 Back     alignment and structure
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A* Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Back     alignment and structure
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A* Back     alignment and structure
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens} Back     alignment and structure
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A* Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Back     alignment and structure
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces} Back     alignment and structure
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Back     alignment and structure
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A* Back     alignment and structure
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 Back     alignment and structure
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A* Back     alignment and structure
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* Back     alignment and structure
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Back     alignment and structure
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A* Back     alignment and structure
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Back     alignment and structure
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A* Back     alignment and structure
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A* Back     alignment and structure
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Back     alignment and structure
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1} Back     alignment and structure
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa} Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Back     alignment and structure
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7 Back     alignment and structure
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* Back     alignment and structure
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A Back     alignment and structure
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* Back     alignment and structure
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum} Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii} Back     alignment and structure
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A* Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Back     alignment and structure
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A* Back     alignment and structure
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris} Back     alignment and structure
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A* Back     alignment and structure
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A* Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A* Back     alignment and structure
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Back     alignment and structure
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Back     alignment and structure
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A* Back     alignment and structure
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} Back     alignment and structure
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* Back     alignment and structure
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* Back     alignment and structure
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans} Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Back     alignment and structure
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina} Back     alignment and structure
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris} Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Back     alignment and structure
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Back     alignment and structure
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A* Back     alignment and structure
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis} Back     alignment and structure
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae} Back     alignment and structure
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A* Back     alignment and structure
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum} Back     alignment and structure
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Back     alignment and structure
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A* Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A* Back     alignment and structure
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A* Back     alignment and structure
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Back     alignment and structure
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp} Back     alignment and structure
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Back     alignment and structure
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A* Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Back     alignment and structure
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A* Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A* Back     alignment and structure
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A* Back     alignment and structure
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A* Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Back     alignment and structure
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A* Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Back     alignment and structure
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A* Back     alignment and structure
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A* Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Back     alignment and structure
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A* Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Back     alignment and structure
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A* Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Back     alignment and structure
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Back     alignment and structure
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A* Back     alignment and structure
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A* Back     alignment and structure
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A* Back     alignment and structure
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A* Back     alignment and structure
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A* Back     alignment and structure
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A* Back     alignment and structure
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A* Back     alignment and structure
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A* Back     alignment and structure
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A* Back     alignment and structure
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A* Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Back     alignment and structure
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Back     alignment and structure
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Back     alignment and structure
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A* Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A* Back     alignment and structure
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A* Back     alignment and structure
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A* Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Back     alignment and structure
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A* Back     alignment and structure
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Back     alignment and structure
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A* Back     alignment and structure
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A* Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A* Back     alignment and structure
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A* Back     alignment and structure
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A* Back     alignment and structure
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Back     alignment and structure
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans} Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} Back     alignment and structure
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp} Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A* Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} Back     alignment and structure
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A* Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Back     alignment and structure
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} Back     alignment and structure
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Back     alignment and structure
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Back     alignment and structure
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A* Back     alignment and structure
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} Back     alignment and structure
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* Back     alignment and structure
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} Back     alignment and structure
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} Back     alignment and structure
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} Back     alignment and structure
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Back     alignment and structure
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 Back     alignment and structure
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Back     alignment and structure
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Back     alignment and structure
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} Back     alignment and structure
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Back     alignment and structure
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1 Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} Back     alignment and structure
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} Back     alignment and structure
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Back     alignment and structure
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Back     alignment and structure
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris} Back     alignment and structure
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Back     alignment and structure
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* Back     alignment and structure
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis} Back     alignment and structure
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum} Back     alignment and structure
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis} Back     alignment and structure
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} Back     alignment and structure
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Back     alignment and structure
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Back     alignment and structure
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} Back     alignment and structure
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* Back     alignment and structure
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Back     alignment and structure
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A Back     alignment and structure
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} Back     alignment and structure
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Back     alignment and structure
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* Back     alignment and structure
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Back     alignment and structure
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Back     alignment and structure
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Back     alignment and structure
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} Back     alignment and structure
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Back     alignment and structure
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Back     alignment and structure
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* Back     alignment and structure
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris} Back     alignment and structure
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} Back     alignment and structure
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} Back     alignment and structure
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Back     alignment and structure
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* Back     alignment and structure
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A* Back     alignment and structure
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* Back     alignment and structure
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Back     alignment and structure
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Back     alignment and structure
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A Back     alignment and structure
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Back     alignment and structure
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} Back     alignment and structure
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* Back     alignment and structure
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} Back     alignment and structure
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* Back     alignment and structure
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* Back     alignment and structure
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Back     alignment and structure
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Back     alignment and structure
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Back     alignment and structure
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Back     alignment and structure
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} Back     alignment and structure
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} Back     alignment and structure
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Back     alignment and structure
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Back     alignment and structure
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} Back     alignment and structure
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Back     alignment and structure
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Back     alignment and structure
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae} Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Back     alignment and structure
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* Back     alignment and structure
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Back     alignment and structure
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Back     alignment and structure
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Back     alignment and structure
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Back     alignment and structure
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* Back     alignment and structure
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Back     alignment and structure
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} Back     alignment and structure
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Back     alignment and structure
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Back     alignment and structure
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Back     alignment and structure
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Back     alignment and structure
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Back     alignment and structure
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} Back     alignment and structure
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Back     alignment and structure
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Back     alignment and structure
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} Back     alignment and structure
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* Back     alignment and structure
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Back     alignment and structure
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A* Back     alignment and structure
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} Back     alignment and structure
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Back     alignment and structure
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A Back     alignment and structure
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* Back     alignment and structure
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Back     alignment and structure
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* Back     alignment and structure
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* Back     alignment and structure
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Back     alignment and structure
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Back     alignment and structure
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Back     alignment and structure
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Back     alignment and structure
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Back     alignment and structure
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* Back     alignment and structure
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* Back     alignment and structure
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Back     alignment and structure
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 Back     alignment and structure
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 675
d2bcgg1297 c.3.1.3 (G:5-301) Guanine nucleotide dissociation 2e-31
d1d5ta1336 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide di 6e-30
d2f5va1379 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W 2e-20
d2dw4a2449 c.3.1.2 (A:274-654,A:764-831) Lysine-specific hist 2e-19
d2v5za1383 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {H 2e-19
d2ivda1347 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen ox 5e-18
d1seza1373 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen ox 2e-15
d1b5qa1347 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Mai 5e-13
d2iida1370 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {M 5e-13
d3coxa1370 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of 5e-12
d1y0pa2308 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 ( 4e-10
d1i8ta1298 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mu 1e-09
d1d4ca2322 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 ( 1e-09
d1ryia1276 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO { 2e-09
d2bs2a2336 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wo 3e-09
d1qo8a2317 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 ( 3e-09
d1ojta1229 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide deh 3e-09
d1dxla1221 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehyd 4e-09
d2i0za1251 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {B 7e-09
d2gf3a1281 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bac 1e-08
d3lada1229 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehyd 2e-08
d1h6va1235 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin 2e-08
d3grsa1221 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase 2e-08
d1n4wa1367 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of 3e-08
d1v59a1233 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehyd 3e-08
d1kdga1360 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain 4e-08
d2gqfa1253 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein H 6e-08
d1ebda1223 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehyd 7e-08
d2gmha1380 c.3.1.2 (A:4-236,A:336-482) Electron transfer flav 9e-08
d1neka2330 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase 1e-07
d2bi7a1314 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mu 1e-07
d1onfa1259 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase 2e-07
d1chua2305 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {E 2e-07
d1gesa1217 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase 3e-07
d1jnra2356 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reduct 5e-07
d1lvla1220 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehyd 5e-07
d1mo9a1261 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketop 8e-07
d1rp0a1278 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi 1e-06
d1w4xa1298 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxy 1e-06
d1kf6a2311 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Es 2e-06
d1c0pa1268 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxida 8e-06
d2gjca1311 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Th 9e-06
d1feca1240 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductas 1e-05
d1aoga1238 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductas 2e-05
d1kifa1246 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N 2e-05
d1ju2a1351 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase { 3e-05
d1pj5a2305 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine ox 5e-05
d1k0ia1292 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydr 6e-05
d2voua1265 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr 8e-05
d1fl2a1184 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide 1e-04
d1cf3a1385 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper 1e-04
d1gpea1391 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic 1e-04
d2cula1230 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {T 2e-04
d1trba1190 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase 2e-04
d1xdia1233 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehyd 2e-04
d2gv8a1335 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monox 3e-04
d3c96a1288 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Ps 0.001
d1pn0a1360 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {So 0.001
d1vdca1192 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase 0.002
d1vg0a1491 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 { 0.002
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 297 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  122 bits (306), Expect = 2e-31
 Identities = 45/294 (15%), Positives = 93/294 (31%), Gaps = 15/294 (5%)

Query: 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFG 215
            DYD IV+G+GI   + +  L+V G +VL ++K    GG +              + +  
Sbjct: 4   TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISK 63

Query: 216 FSDKGNLNLITQALAAVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHE 275
              +            +  +  +     T      +     V R         +  F   
Sbjct: 64  EERESKFGKDRDWNVDLIPKFLMANGELTNILIHTD-----VTRYVDFKQVSGSYVFKQG 118

Query: 276 KEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARK 335
           K   +            +   E + +++ +     + +  L               +  K
Sbjct: 119 KIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYK 178

Query: 336 YIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC-------DRHFGGINYPVGGVGGI 388
           +        FI     + +  + LQ P   +   +                YP+ G+G +
Sbjct: 179 FGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYLYPMYGLGEL 238

Query: 389 AKSLAKGLADKGSEILYKANVTKVIL--EQGKAVGVRLSDGREFYAKTIISNAT 440
            +  A+  A  G   +    + +V+   + GK  GV+ +    F A  +I++ T
Sbjct: 239 PQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVK-TKLGTFKAPLVIADPT 291
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId: 9913]} Length = 336 Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 Back     information, alignment and structure
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 449 Back     information, alignment and structure
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Length = 383 Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Length = 347 Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 373 Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 347 Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Length = 370 Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Length = 370 Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 308 Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 298 Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Length = 322 Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Length = 276 Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Length = 336 Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 317 Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Length = 229 Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 221 Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Length = 251 Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Length = 281 Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Length = 229 Back     information, alignment and structure
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 235 Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Length = 367 Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 233 Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Length = 253 Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 223 Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Length = 380 Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Length = 330 Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Length = 314 Back     information, alignment and structure
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Length = 259 Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Length = 305 Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Length = 217 Back     information, alignment and structure
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 356 Back     information, alignment and structure
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 220 Back     information, alignment and structure
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Length = 261 Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Length = 278 Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Length = 298 Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Length = 311 Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Length = 268 Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 311 Back     information, alignment and structure
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Length = 240 Back     information, alignment and structure
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Length = 238 Back     information, alignment and structure
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 246 Back     information, alignment and structure
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 351 Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Length = 305 Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Length = 292 Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265 Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Length = 184 Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Length = 230 Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Length = 190 Back     information, alignment and structure
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 233 Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Length = 335 Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Length = 288 Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Length = 360 Back     information, alignment and structure
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 192 Back     information, alignment and structure
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 491 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query675
d2bcgg1297 Guanine nucleotide dissociation inhibitor, GDI {Ba 99.88
d2v5za1383 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 99.85
d1d5ta1336 Guanine nucleotide dissociation inhibitor, GDI {Co 99.84
d2ivda1347 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 99.81
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 99.79
d2dw4a2449 Lysine-specific histone demethylase 1, LSD1 {Human 99.75
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 99.67
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 99.6
d2gf3a1281 Sarcosine oxidase {Bacillus sp., strain b0618 [Tax 99.6
d1pj5a2305 N,N-dimethylglycine oxidase {Arthrobacter globifor 99.54
d1ryia1276 Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} 99.53
d2i0za1251 Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] 99.51
d2gqfa1253 Hypothetical protein HI0933 {Haemophilus influenza 99.41
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 99.4
d1y0pa2308 Flavocytochrome c3 (respiratory fumarate reductase 99.38
d1qo8a2317 Flavocytochrome c3 (respiratory fumarate reductase 99.32
d1d4ca2322 Flavocytochrome c3 (respiratory fumarate reductase 99.3
d1i8ta1298 UDP-galactopyranose mutase, N-terminal domain {Esc 99.27
d1vg0a1491 Rab escort protein 1 {Rat (Rattus norvegicus) [Tax 99.24
d2bs2a2336 Fumarate reductase {Wolinella succinogenes [TaxId: 99.12
d1w4xa1298 Phenylacetone monooxygenase {Thermobifida fusca [T 99.09
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 99.01
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 98.97
d1kf6a2311 Fumarate reductase {Escherichia coli [TaxId: 562]} 98.94
d2gv8a1335 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 98.92
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 98.92
d2cula1230 GidA-related protein TTHA1897 {Thermus thermophilu 98.88
d3coxa1370 Cholesterol oxidase of GMC family {Brevibacterium 98.88
d1neka2330 Succinate dehydogenase {Escherichia coli [TaxId: 5 98.84
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 98.81
d1n4wa1367 Cholesterol oxidase of GMC family {Streptomyces sp 98.81
d1chua2305 L-aspartate oxidase {Escherichia coli [TaxId: 562] 98.8
d1rp0a1278 Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara 98.75
d3c96a1288 Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 98.74
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 98.73
d1feca2117 Trypanothione reductase {Crithidia fasciculata [Ta 98.73
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 98.72
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 98.72
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 98.67
d1m6ia2137 Apoptosis-inducing factor (AIF) {Human (Homo sapie 98.67
d1k0ia1292 p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a 98.66
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 98.63
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 98.62
d1lvla2115 Dihydrolipoamide dehydrogenase {Pseudomonas putida 98.62
d1v59a1233 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 98.6
d1aoga2117 Trypanothione reductase {Trypanosoma cruzi [TaxId: 98.59
d1jnra2356 Adenylylsulfate reductase A subunit {Archaeon Arch 98.59
d1dxla1221 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 98.57
d1kdga1360 Flavoprotein domain of flavocytochrome cellobiose 98.54
d3lada1229 Dihydrolipoamide dehydrogenase {Azotobacter vinela 98.52
d2gmha1380 Electron transfer flavoprotein-ubiquinone oxidored 98.51
d1ojta1229 Dihydrolipoamide dehydrogenase {Neisseria meningit 98.51
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 98.5
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 98.49
d1cf3a1385 Glucose oxidase {Aspergillus niger [TaxId: 5061]} 98.46
d1xhca2122 NADH oxidase /nitrite reductase {Pyrococcus furios 98.44
d1gpea1391 Glucose oxidase {Penicillium amagasakiense [TaxId: 98.44
d1lqta2239 Ferredoxin:NADP reductase FprA {Mycobacterium tube 98.43
d1ojta2125 Dihydrolipoamide dehydrogenase {Neisseria meningit 98.42
d1gesa1217 Glutathione reductase {Escherichia coli [TaxId: 56 98.41
d1mo9a2121 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 98.38
d1dxla2123 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 98.37
d3grsa2125 Glutathione reductase {Human (Homo sapiens) [TaxId 98.37
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 98.33
d2gjca1311 Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( 98.32
d1cjca2230 Adrenodoxin reductase of mitochondrial p450 system 98.31
d1h6va1235 Mammalian thioredoxin reductase {Rat (Rattus norve 98.31
d1h6va2122 Mammalian thioredoxin reductase {Rat (Rattus norve 98.29
d2f5va1379 Pyranose 2-oxidase {White-rot fungus (Peniophora s 98.25
d1fl2a1184 Alkyl hydroperoxide reductase subunit F (AhpF), C- 98.23
d1lvla1220 Dihydrolipoamide dehydrogenase {Pseudomonas putida 98.2
d1ebda1223 Dihydrolipoamide dehydrogenase {Bacillus stearothe 98.18
d1trba1190 Thioredoxin reductase {Escherichia coli [TaxId: 56 98.18
d1onfa1259 Glutathione reductase {Plasmodium falciparum [TaxI 98.17
d3grsa1221 Glutathione reductase {Human (Homo sapiens) [TaxId 98.17
d1mo9a1261 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 98.13
d1vdca1192 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 98.1
d1feca1240 Trypanothione reductase {Crithidia fasciculata [Ta 98.06
d1pn0a1360 Phenol hydroxylase {Soil-living yeast (Trichosporo 98.04
d1aoga1238 Trypanothione reductase {Trypanosoma cruzi [TaxId: 97.93
d1nhpa1198 NADH peroxidase {Enterococcus faecalis [TaxId: 135 97.89
d1m6ia1213 Apoptosis-inducing factor (AIF) {Human (Homo sapie 97.83
d1xdia1233 Dihydrolipoamide dehydrogenase {Mycobacterium tube 97.53
d1kifa1246 D-aminoacid oxidase, N-terminal domain {Pig (Sus s 97.51
d1ju2a1351 Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI 97.49
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 96.92
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 96.85
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 96.54
d1q1ra1185 Putidaredoxin reductase {Pseudomonas putida [TaxId 96.48
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 96.42
d1xhca1167 NADH oxidase /nitrite reductase {Pyrococcus furios 96.3
d1d7ya1183 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 96.25
d1trba2126 Thioredoxin reductase {Escherichia coli [TaxId: 56 96.07
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 95.96
d1fl2a2126 Alkyl hydroperoxide reductase subunit F (AhpF), C- 95.92
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 95.52
d1djqa2156 Trimethylamine dehydrogenase, C-terminal domain {M 95.41
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 95.39
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 95.36
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 95.21
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 95.08
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 95.02
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 94.77
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 94.49
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 94.27
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 94.25
d2pv7a2152 Prephenate dehydrogenase TyrA {Haemophilus influen 94.18
d2ivda2108 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 94.12
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 94.02
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 93.51
d1gtea3153 Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su 93.49
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 93.47
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 93.47
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 93.04
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 92.95
d1vpda2161 Hydroxyisobutyrate dehydrogenase {Salmonella typhi 92.45
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 92.38
d1seza2112 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 92.3
d2iida2113 L-aminoacid oxidase {Malayan pit viper (Calloselas 92.23
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 92.15
d2pgda2176 6-phosphogluconate dehydrogenase {Sheep (Ovis orie 91.71
d1dlja2196 UDP-glucose dehydrogenase (UDPGDH) {Streptococcus 91.48
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 91.42
d3cuma2162 Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru 91.37
d1pgja2178 6-phosphogluconate dehydrogenase {Trypanosoma bruc 91.25
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 91.14
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 91.05
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 90.62
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 90.4
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 90.27
d1kjqa2111 Glycinamide ribonucleotide transformylase PurT, N- 90.2
d1uxja1142 Malate dehydrogenase {Chloroflexus aurantiacus [Ta 90.16
d1y6ja1142 Lactate dehydrogenase {Clostridium thermocellum [T 90.08
d2ldxa1159 Lactate dehydrogenase {Mouse (Mus musculus) [TaxId 89.93
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 89.65
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 89.55
d2gv8a2107 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 89.39
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 89.34
d1p3da196 UDP-N-acetylmuramate-alanine ligase MurC {Haemophi 89.31
d1a9xa3127 Carbamoyl phosphate synthetase (CPS), large subuni 89.01
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 88.9
d1i36a2152 Conserved hypothetical protein MTH1747 {Archaeon M 88.83
d1hyea1145 MJ0490, lactate/malate dehydrogenase {Archaeon Met 88.48
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 88.35
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 87.87
d1vdca2130 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 87.79
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 87.67
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 87.53
d1gtea1182 Dihydropyrimidine dehydrogenase, N-terminal domain 87.1
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 87.0
d1id1a_153 Rck domain from putative potassium channel Kch {Es 86.97
d2dw4a3109 Lysine-specific histone demethylase 1, LSD1 {Human 86.81
d2v5za2112 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 86.77
d1b5qa2112 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 86.59
d1mlda1144 Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 86.48
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 86.33
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 85.79
d1ps9a2162 2,4-dienoyl-CoA reductase, C-terminal domain {Esch 85.55
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 85.31
d1qyda_312 Pinoresinol-lariciresinol reductase {Giant arborvi 84.98
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 84.69
d1qyca_307 Phenylcoumaran benzylic ether reductase {Loblolly 84.59
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 84.41
d1d7ya1183 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 84.39
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 84.29
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 84.26
d2ahra2152 Pyrroline-5-carboxylate reductase ProC {Streptococ 84.13
d1a9xa4121 Carbamoyl phosphate synthetase (CPS), large subuni 84.11
d1ps9a2162 2,4-dienoyl-CoA reductase, C-terminal domain {Esch 83.8
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 83.75
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 83.68
d3etja278 N5-carboxyaminoimidazole ribonucleotide synthetase 83.65
d2f5va1379 Pyranose 2-oxidase {White-rot fungus (Peniophora s 83.57
d1yqga2152 Pyrroline-5-carboxylate reductase ProC {Neisseria 83.11
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 82.72
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 82.52
d1nvta1177 Shikimate 5-dehydrogenase AroE {Archaeon Methanoco 82.26
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 82.11
d1xhca1167 NADH oxidase /nitrite reductase {Pyrococcus furios 82.11
d2gjca1311 Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( 82.09
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 80.67
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=2.1e-22  Score=200.10  Aligned_cols=251  Identities=19%  Similarity=0.225  Sum_probs=146.4

Q ss_pred             CCCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCCcceeEeeCC------------------------eEEccc
Q 005832          154 GADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDG------------------------YTFDVG  209 (675)
Q Consensus       154 ~~~~~~~~iig~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g------------------------~~~d~G  209 (675)
                      |+..|||||||||++||+||++|+++|++|+||||++.+||+++|+..++                        +.+|.+
T Consensus         2 m~~~yDviViGaG~~Gl~~A~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   81 (297)
T d2bcgg1           2 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLI   81 (297)
T ss_dssp             CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred             CCCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCcceEEeeccccccccCCCccccccccccccccccceeccC
Confidence            56789999999999999999999999999999999999999999876433                        334555


Q ss_pred             cccccCCCCCCchHHHHHHHHHcCCce--eEeeCCCeEEEEcCCCeEEEEcCCHHHHHHHHHHhCCC--cHHHHHHHHHH
Q 005832          210 SSVMFGFSDKGNLNLITQALAAVGCEM--EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPH--EKEGVLAFYGE  285 (675)
Q Consensus       210 ~~~~~g~~~~~~~~~~~~ll~~lGl~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~--~~~~~~~~~~~  285 (675)
                      ++.+..      ...+...+...+...  .......  .+.+.++....++....+..   ......  .+..+..+...
T Consensus        82 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  150 (297)
T d2bcgg1          82 PKFLMA------NGELTNILIHTDVTRYVDFKQVSG--SYVFKQGKIYKVPANEIEAI---SSPLMGIFEKRRMKKFLEW  150 (297)
T ss_dssp             CCBEET------TSHHHHHHHHHTGGGTCCEEECCC--EEEEETTEEEECCSSHHHHH---HCTTSCHHHHHHHHHHHHH
T ss_pred             cccccC------CCcceeeeeeccccccccccccCc--ccccccCCccccccchhhhh---hccccccccchhhhhhhhh
Confidence            554431      122333333333321  1111111  12234455555544433221   111100  01111111111


Q ss_pred             HHHHHHHhhhhhhhccchhhHHHhhhhcChhhhhHHhhhccccHHHHHHHhCCCHHHHHHHhhhhhhhccCCCCCchHHH
Q 005832          286 CWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMIN  365 (675)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~  365 (675)
                             .....               ...........+...+..++++.+..++.++.++...............++..
T Consensus       151 -------~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (297)
T d2bcgg1         151 -------ISSYK---------------EDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARP  208 (297)
T ss_dssp             -------HHHCB---------------TTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHH
T ss_pred             -------hhhhh---------------hccccchhhhcccchhhhhhhhhhccCHHHHHHHHHHHhhhccccccchhhhh
Confidence                   00000               00000011112234466777777777777776665432222212222223222


Q ss_pred             HHHH-------HHHhhcCcccccCCCHHHHHHHHHHHHHHcCcEEEecceeeEEEEe--CCeEEEEEeCCCCEEEcCEEE
Q 005832          366 ASMV-------LCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILE--QGKAVGVRLSDGREFYAKTII  436 (675)
Q Consensus       366 ~~~~-------~~~~~~~g~~~p~gG~~~l~~~L~~~l~~~Gv~v~~~~~V~~I~~~--~~~v~gV~~~~G~~i~ad~VI  436 (675)
                      ....       ......+++.+|+||++.++++|++.++++|++|++|++|++|.++  ++++++|+ .+|++++||+||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~~~v~~v~-~~g~~~~ad~VI  287 (297)
T d2bcgg1         209 SFERILLYCQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVK-TKLGTFKAPLVI  287 (297)
T ss_dssp             HHHHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEE-ETTEEEECSCEE
T ss_pred             hhhhhhhhhhcccccccCcceeccCcHHHHHHHHHHHHHhcCCEEEeCCEeeEEEEECCCCEEEEEE-cCCEEEECCEEE
Confidence            1111       1112235778999999999999999999999999999999999885  46787775 578899999999


Q ss_pred             EC
Q 005832          437 SN  438 (675)
Q Consensus       437 ~A  438 (675)
                      ++
T Consensus       288 ~~  289 (297)
T d2bcgg1         288 AD  289 (297)
T ss_dssp             EC
T ss_pred             EC
Confidence            85
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Back     information, alignment and structure
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Back     information, alignment and structure
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2ivda2 d.16.1.5 (A:307-414) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1seza2 d.16.1.5 (A:330-441) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gtea1 a.1.2.2 (A:2-183) Dihydropyrimidine dehydrogenase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure