Citrus Sinensis ID: 005894

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-
Protein Sequence
MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNIIYHPALTVADIVRPPLPPVTPVSQSAPGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLLSMGH
Secondary Structure (PSIPRED)
ccccccccccEEEEcccccccccEEEcccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccHHHHHccccHHHHHHHHHHHHccccEEEcccccHHHHHHHHHcccccccEEEEEcccccccccccccHHHHHHHHHHHHHccEEccccccEEEEccccccccccccHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccEEccccccccccccHHHHHHHHHHccccEEEEccEEccccEEEEEccccccccccccccccccccccccccccccEEEEEccHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHcccccEEEEEEccccHHHHcccccHHHHHHHHHHHccccccccccEEEEcccHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHccEEcccccEEEEccccccccHHHHHHHHHHcccEEEEEEEccccccccccccccHHHHHHHHHHHccccEEEcccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEEEEEEEcccEEEEEcccccccccccHHHccccccEEEEccEcccEEEEEEccHHHHHcEEEEcccccccccccccccccccccccHHHHHHccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccccEEEEccccccccccccHHHHHHHHcccEEEcccHcccccccccccccHHHHHHHHHHcccccccEEEcccccHHHHHccccEEEEEcccccccccccHHHHHHHHHccccEEEccEEEEcccEEEEEccccccccccHHHHccccccEEEcccccccEEEEEccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHccccEEEEEccccHHHHHHHccccHHHHHHHHHHHccccccccccEEEEcccHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHccccccccEEEcccccccccccHHHHHHHHcccEEEEEEEccccccccccccccHHHHHHHHHHHccccEEEccccHHHHHHHHcccccccccccccccccccccHHHcccccccccccccccccHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAKSNCLSNAIMLCNLqfskdglgvclsdvrlnnittingafkdqqttkningnnvrgwfsVDYTLEQLGQLYLVQNvytrseafdntqpiptpdtiYDLFYSQHNISAAKYITEYLQKLISNVyyisspeigflktmdrkvdhntTKLVFMVlepnavepttnqtYGSILKNLTAIKSFasgivvpksyiipvnnktrylepattlvtdAHNAGLQVYASGfandiyssysynfepeaeyltfidnsqfavdgfitdfpttateaidrpliithngasgvyagCTDLAYqqavddgadiiDCTVQMSKEGVAFclespdligktTAATVFMSkatsvpeiqkergifsfdLTWTEiqslkpqisspfdksnppiirnpeaknkgkfvTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSnatfdkqstQQVMIqsddssvlskfqdvpayKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVatfaqgvgvdgittefpataSKYFRskcsddvekqdfrilpvvpgelldvtdlktrpniiyhpaltvadivrpplppvtpvsqsapgssglvapapqggvptnvaNIGLTLAAIMLFCLLSMGH
Flexible Loop (DISEMBL)
MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTingafkdqqttkningnnVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKatsvpeiqkerGIFSFDLTWTEIQSlkpqisspfdksnppiirnpeaknkGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNatfdkqstqqVMIQSDDSSVLSKFQDVPAYKKVLHirkevsaaprevvEEIKKyasavtvtrtsvisttesfttnatniLRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRskcsddvekqdfrilpvvpgelldvtdlktRPNIIYHPALTVADIVRPPLPPVTPVSQSAPGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLLSMGH
Low Complexity Region (SEG)
MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAvtvtrtsvisttesFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNIIYHPALTVADIVRPPLPPVTPVSQSAPGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLLSMGH
Disordered region (IsUnstruct)
*****CLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQS*************************GKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATF*****************LSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNIIYHPALTVADIVR***************************VPTNVANIGLTLAAIMLFCLL****
Disordered Region (DISOPRED)
MAKS*CLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRS***********************V*****RPNIIYHPALTVADIVRPPL*****************************ANIGLTLAAIMLFCLLSMGH
Disordered Region (DISEMBL)
MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFD****************LSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNIIYHPALTVADIVRPPLPPV**************APAPQGGVPTNVANIGLTLAAIMLFCLLSMGH
Disordered Region (DISPRO)
****NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNIIYHPALTVADIVRPPLPPVT******************GGVPTNVANIGLTLAAIMLFCLLSMG*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNIIYHPALTVADIVRPPLPPVTPVSQSAPGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLLSMGH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	671	2.2.26 [Sep-21-2011]
Q7Y208	763	Probable glycerophosphory	no	no	0.952	0.837	0.417	1e-147
Q9SZ11	759	Probable glycerophosphory	no	no	0.971	0.859	0.402	1e-146
Q9FJ62	766	Probable glycerophosphory	no	no	0.937	0.821	0.403	1e-143

>sp|Q7Y208|GLPQ3_ARATH Probable glycerophosphoryl diester phosphodiesterase 3 OS=Arabidopsis thaliana GN=GPDL3 PE=1 SV=2

 Score =  522 bits (1345), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 283/678 (41%), Positives = 417/678 (61%), Gaps = 39/678 (5%)

Query: 1   MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWF 60
           +A    +++ ++ C+LQ +KDGLG+C  D+ L N +TI+  + +++ + ++NG   +GWF
Sbjct: 72  LATLTSVADVVLWCDLQLTKDGLGICFPDLNLANASTIDRVYPNREKSYSVNGVTTKGWF 131

Query: 61  SVDYTLEQLGQLYLVQNVYTRSEAFD-NTQPIPTPDTI--------------YDLFYSQH 105
             D++L +L    L++ + +R++ FD N   I T + +              +D FY Q 
Sbjct: 132 PNDFSLTELQNFLLIRGILSRTDRFDGNGYLISTIEDVVTTLNREGFWLNVQHDAFYEQQ 191

Query: 106 NISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQ 165
           N+S + ++    + +  ++ +ISSPE+ F K +      N    VF  L     EPTTN+
Sbjct: 192 NLSMSSFLLSVSRTV--SIDFISSPEVNFFKKITGSFGRNGPTFVFQFLGKEDFEPTTNR 249

Query: 166 TYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAN 225
           TYGSIL NLT +K+FASGI+VPKSYI+P++++ +YL P T+LV DAH AGLQVY SGFAN
Sbjct: 250 TYGSILSNLTFVKTFASGILVPKSYILPLDDE-QYLVPHTSLVQDAHKAGLQVYVSGFAN 308

Query: 226 DIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID-------------RPLI 272
           D+  +Y+Y+ +P +EYL+F+DN  F+VDG ++DFP TA+ A+D               L+
Sbjct: 309 DVDIAYNYSSDPVSEYLSFVDNGDFSVDGVLSDFPITASAAVDCFSHIGRNATKQVDFLV 368

Query: 273 ITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTA-ATVF 331
           I+ +GASG Y GCTDLAY++A+ DGAD+IDC+VQMS +GV FCL S DL     A    F
Sbjct: 369 ISKDGASGDYPGCTDLAYEKAIKDGADVIDCSVQMSSDGVPFCLRSIDLRNSIAALQNTF 428

Query: 332 MSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLD 391
            +++TSVPEI    GIF+F LTW EIQSL P IS+PF      I RNP  KN GK ++L 
Sbjct: 429 SNRSTSVPEISSVPGIFTFSLTWPEIQSLTPAISNPFRVYR--IFRNPREKNSGKLISLS 486

Query: 392 GFLEFAKT-KAVSGVLININNAAYLASKKGLGVVDAVTKALSNATF-DKQSTQQVMIQSD 449
            FL+ AKT  ++SGVLI++ NAAYL  K+GL VV AV   L+ A + +  +T +VMIQS 
Sbjct: 487 QFLDLAKTYTSLSGVLISVENAAYLREKQGLDVVQAVLDTLTEAGYSNGTTTTKVMIQST 546

Query: 450 DSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNA 509
           +SSVL  F+    Y+ V  I + +       +E+IKK+A+AV + + SV   ++SF T  
Sbjct: 547 NSSVLVDFKKQSKYETVYKIEETIGNIRDSAIEDIKKFANAVVINKDSVFPNSDSFLTGQ 606

Query: 510 TNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASK 569
           TN++  L  + + VY+   RNE++S A+D+ +D  +E+  +  G G++G  TEFP TA++
Sbjct: 607 TNVVERLQKSQLPVYVELFRNEFVSQAYDFFSDATVEINAYIYGAGINGTITEFPFTAAR 666

Query: 570 YFRSKCSDDVEKQDFRILPVVPGELLDV-TDLKTRPNIIYHPALTVADIVRPPLPPV-TP 627
           Y R++C    E   + +LPV PG LL+V + L   P    +     AD+  PPL PV   
Sbjct: 667 YKRNRCLGREEVPPY-MLPVNPGGLLNVMSPLSLPPAQAPNQDFIEADVTEPPLSPVIAK 725

Query: 628 VSQSAPGSSGLVAPAPQG 645
              S PG+   +A AP G
Sbjct: 726 APTSTPGTPSTIAQAPSG 743

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 4EC: 6

>sp|Q9SZ11|GLPQ2_ARATH Probable glycerophosphoryl diester phosphodiesterase 2 OS=Arabidopsis thaliana GN=GPDL2 PE=1 SV=3

 Score =  520 bits (1340), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 278/691 (40%), Positives = 428/691 (61%), Gaps = 39/691 (5%)

Query: 9   NAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQ 68
           +A++ C++Q +KD LG+C  D+ + N ++I   +  +Q +  +NG    GWF++D++L+ 
Sbjct: 74  DAVLWCDVQLTKDALGICFPDLTMRNSSSIEAVYPTRQKSYPVNGVPTSGWFTIDFSLKD 133

Query: 69  LGQLYLVQNVYTRSEAFD-NTQPIPTPDTI--------------YDLFYSQHNISAAKYI 113
           L  + L++ + +RSE FD N+ PI T  ++              +D FY+QHN+S + ++
Sbjct: 134 LKDVNLIRGILSRSEKFDGNSNPIMTVQSVSTQMKPSFFWLNVQHDAFYAQHNLSMSSFL 193

Query: 114 TEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKN 173
               + ++  + +ISSPE+ F K +  +   N   LVF  L  +  EPTTN+TYGSIL N
Sbjct: 194 VAASKTVL--IDFISSPEVNFFKKIAGRFGRNGPSLVFRFLGQDEFEPTTNRTYGSILSN 251

Query: 174 LTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSY 233
           LT +K+FASGI+VPKSYI+P++++ +YL P T+LV DAH AGL+V+ SGFANDI  ++ Y
Sbjct: 252 LTFVKTFASGILVPKSYILPLDDQ-QYLLPHTSLVQDAHKAGLEVFVSGFANDIDIAHDY 310

Query: 234 NFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID-------------RPLIITHNGASG 280
           +F+P +EYL+F+DN  F+VDG ++DFP TA+ ++D               L+IT +GASG
Sbjct: 311 SFDPVSEYLSFVDNGNFSVDGVLSDFPITASASLDCFSHVGRNATKQVDFLVITKDGASG 370

Query: 281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA-TVFMSKATSVP 339
            Y GCTDLAY++A+ DGAD+IDC+VQ+S +G  FCL S DL   TT + T F +++T+VP
Sbjct: 371 DYPGCTDLAYKKAIKDGADVIDCSVQLSSDGTPFCLSSIDLGNSTTVSLTAFRNRSTTVP 430

Query: 340 EIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAK- 398
           E+     I++F LTW EIQ+L P IS+P+  ++  + RNP+ KN GK  +L  FL  AK 
Sbjct: 431 ELGSLGAIYTFSLTWAEIQTLTPAISNPYRVTS--LFRNPKQKNAGKLFSLSDFLSLAKN 488

Query: 399 TKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQ 458
           + ++SGVLI++ NAAYL  ++GL VV AV   L+   +   +  +VMIQS +SSVL  F+
Sbjct: 489 STSLSGVLISVENAAYLREEQGLDVVKAVLDTLTQTGYSNSTATKVMIQSTNSSVLVDFK 548

Query: 459 DVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHS 518
               Y+ V  + + +       +E+IKK+A AV + + SV    +SF T  TN++  L  
Sbjct: 549 KQSQYETVYKVEENIRDILDSAIEDIKKFADAVVIQKLSVFPVAQSFITTQTNVVEKLQK 608

Query: 519 ANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDD 578
           + + VY+   +NE+LS  +D+ AD  +E+ ++  G G++G  TEFP TA++Y R+ C   
Sbjct: 609 SQLPVYVELFQNEFLSQPYDFFADATVEINSYITGAGINGTITEFPFTAARYKRNLCLGR 668

Query: 579 VEKQDFRILPVVPGELLD-VTDLKTRPNIIYHPALTVADIVRPPLPPVTPVS-QSAPGSS 636
            E   + + P  PG LL  V+     P    +P  T AD+  PPLPPVT  +  S+PG+ 
Sbjct: 669 KETIPY-MAPAQPGALLTLVSPTAFPPAEAPNPVFTDADVTEPPLPPVTAKAPTSSPGTP 727

Query: 637 GLVAPAPQGGVPTNVANIGLTLAAIMLFCLL 667
              A AP G     ++ + L++ A++L  LL
Sbjct: 728 STNAQAPSGQTRITLSLL-LSVFAMVLASLL 757

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: 6

>sp|Q9FJ62|GLPQ1_ARATH Probable glycerophosphoryl diester phosphodiesterase 1 OS=Arabidopsis thaliana GN=GPDL1 PE=1 SV=1

 Score =  510 bits (1313), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 273/676 (40%), Positives = 417/676 (61%), Gaps = 47/676 (6%)

Query: 10  AIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQL 69
           A++ C++Q +KD +G+C  DV++ N + I   +  ++T+  +NG   + WF++D+  + L
Sbjct: 81  AVLWCDVQLTKDAIGLCFPDVKMMNASNIQDVYPKRKTSYLLNGVPTQDWFTIDFNFKDL 140

Query: 70  GQLYLVQNVYTRSEAFD-NTQPIPTPDTI--------------YDLFYSQHNISAAKYIT 114
            ++ L Q + +RS AFD N+  I T   I              +D FY+QHN+S + ++ 
Sbjct: 141 TKVILKQGILSRSAAFDGNSYGISTVKDISTQLKPEGFWLNVQHDAFYAQHNLSMSSFLL 200

Query: 115 EYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNL 174
              + +I  + Y+SSPE+ F + + R+   N  K VF  LE + VE +TNQTYGS+  NL
Sbjct: 201 SISKTVI--IDYLSSPEVNFFRNIGRRFGRNGPKFVFRFLEKDDVEVSTNQTYGSLAGNL 258

Query: 175 TAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYN 234
           T +K+FASG++VPKSYI P+  +++YL P T+ V DAH AGL+VYASGF ND   +Y+Y+
Sbjct: 259 TFLKTFASGVLVPKSYIWPI--ESQYLLPRTSFVQDAHKAGLEVYASGFGNDFDLAYNYS 316

Query: 235 FEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID-------------RPLIITHNGASGV 281
           F+P AEYL+F+DN  F+VDG ++DFP TA+ A+D               L+I+ NGASG 
Sbjct: 317 FDPLAEYLSFMDNGDFSVDGLLSDFPLTASSAVDCFSHLGSNASSQVDFLVISKNGASGD 376

Query: 282 YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTT--AATVFMSKATSVP 339
           Y GCTDLAY +A+ DGAD+IDC++QMS +G+ FCL S +L G++T    + F +++T+VP
Sbjct: 377 YPGCTDLAYTKAIKDGADVIDCSLQMSSDGIPFCLSSINL-GESTNVVQSPFRNRSTTVP 435

Query: 340 EIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAK- 398
           EI    GI+SF L W+EIQ+L+P I +P+ +    + RNP  ++ GKFV+L  FL  AK 
Sbjct: 436 EIGSLPGIYSFSLAWSEIQTLRPAIENPYSREFT-MFRNPRERSSGKFVSLSDFLNLAKN 494

Query: 399 TKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATF-DKQSTQQVMIQSDDSSVLSKF 457
           + +++GVLI++ NA YL  K+GL  V AV   L+ A + +K +T +VMIQS +SSVL  F
Sbjct: 495 SSSLTGVLISVENATYLREKQGLDAVKAVLDTLTEAGYSNKTTTTRVMIQSTNSSVLIDF 554

Query: 458 QDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLH 517
           +    Y+ V  + + +       +E+IKK+A AV +++ SV  T+ESFTT  T ++  L 
Sbjct: 555 KKQSRYETVYKVEETIRDILDTAIEDIKKFADAVVISKKSVFPTSESFTTGQTKLVERLQ 614

Query: 518 SANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSD 577
              + VY+   RNE++S  +D+ AD  +E+ +   G G++G  TEFP TA++Y R+ C  
Sbjct: 615 KFQLPVYVEVFRNEFVSQPWDFFADATVEINSHVTGAGINGTITEFPLTAARYKRNSC-- 672

Query: 578 DVEKQDF--RILPVVPGELLDVTDLKTRPNI-IYHPALTVADIVRPPLPPVT---PVSQS 631
            + ++D    ++PV P  LL +    + P      P  T AD+  PPLPPV+   P +  
Sbjct: 673 -LTRKDVPPYMIPVQPAGLLTIVSPASLPPAEAPSPVFTDADVTEPPLPPVSARAPTTTP 731

Query: 632 APGSSGLVAPAPQGGV 647
            P S+G  +P  Q  V
Sbjct: 732 GPQSTGEKSPNGQTRV 747

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 4

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	671
224088248	731	predicted protein [Populus trichocarpa]	0.977	0.897	0.547	0.0
297796735	754	glycerophosphoryl diester phosphodiester	0.988	0.879	0.526	0.0
297796723	754	glycerophosphoryl diester phosphodiester	0.983	0.875	0.528	0.0
255565021	753	glycerophosphoryl diester phosphodiester	0.976	0.869	0.541	0.0
224143985	751	predicted protein [Populus trichocarpa]	0.988	0.882	0.536	0.0
15242971	750	protein SEUSS-like 5 [Arabidopsis thalia	0.959	0.858	0.530	0.0
22327932	753	protein SEUSS-like 4 [Arabidopsis thalia	0.950	0.847	0.536	0.0
297735902	756	unnamed protein product [Vitis vinifera]	0.967	0.858	0.530	0.0
242093682	744	hypothetical protein SORBIDRAFT_10g02500	0.922	0.831	0.493	1e-176
356546095	764	PREDICTED: probable glycerophosphoryl di	0.968	0.850	0.482	1e-173

>gi|224088248|ref|XP_002308389.1| predicted protein [Populus trichocarpa] gi|222854365|gb|EEE91912.1| predicted protein [Populus trichocarpa]

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/688 (54%), Positives = 495/688 (71%), Gaps = 32/688 (4%)

Query: 1   MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWF 60
           MA    + + ++LCNLQ +KDG+G+C  D+RL+N T I   F+    T  +NG ++ GWF
Sbjct: 56  MALGTSVHDVVVLCNLQLTKDGVGICQGDIRLDNTTNIAMLFEKGSKTYKVNGQDLTGWF 115

Query: 61  SVDYTLEQL-GQLYLVQNVYTRSEAFDNTQPIPTPDTI-------------YDLFYSQHN 106
           ++D+T +QL   + LVQN+++R  AFD   P+ T D +             YD FY+++ 
Sbjct: 116 ALDFTADQLLANVSLVQNIFSRPSAFDGMLPMSTVDDVRNSNPPAFWLNVQYDAFYTENK 175

Query: 107 ISAAKYITEYLQKL--ISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTN 164
           +S    +T Y+QK   +  V YISSPEIGFLK M+  V+   T L+F+ L+  A EPT++
Sbjct: 176 LS----VTNYIQKATRLQGVNYISSPEIGFLKRMNGLVNKAKTMLIFVFLDKKATEPTSS 231

Query: 165 QTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFA 224
           QTYGSIL NL  IK FASGIVVPK YI  VN    YL+  T+LV DAH  GL+VYASGFA
Sbjct: 232 QTYGSILGNLATIKKFASGIVVPKDYIWTVNT-ANYLDAPTSLVNDAHKLGLEVYASGFA 290

Query: 225 NDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAG 284
           ND  +SY+Y+++P AEYL FIDNSQF+VDG ITDFP TA+EA+ + LIITHNGASGVYAG
Sbjct: 291 NDFTTSYNYSYDPSAEYLQFIDNSQFSVDGLITDFPPTASEAVGQALIITHNGASGVYAG 350

Query: 285 CTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKE 344
            TDLAYQQ ++DGADIIDC+VQMSK+GVAFCL+S D+   TTAA  FMS +T++PEIQ+ 
Sbjct: 351 STDLAYQQGLEDGADIIDCSVQMSKDGVAFCLDSVDVTRDTTAAATFMSLSTTIPEIQQS 410

Query: 345 RGIFSFDLTWTEIQSLKPQISSPFD-KSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVS 403
            GIFSFDL+W++IQ+L+PQ++SPF+ K   P  RNP  KNKGKF+TL  FLE AK KAV+
Sbjct: 411 SGIFSFDLSWSDIQALQPQLTSPFENKGGLP--RNPANKNKGKFLTLAEFLELAKVKAVT 468

Query: 404 GVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAY 463
           G+LINI NAAYLAS+KGL +V AV  ALSNATFDKQSTQ+V+IQSDD+SVLSKFQ+VPAY
Sbjct: 469 GILINIENAAYLASQKGLDIVSAVNTALSNATFDKQSTQKVLIQSDDTSVLSKFQNVPAY 528

Query: 464 KKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISV 523
            +VL+++ E+S AP+  V EIKKYA AVT+ R S++ T + FTT  T ++ ++H+ANISV
Sbjct: 529 TRVLYLKDEISDAPKTPVGEIKKYADAVTLPRFSIVPTIDGFTTATTKVVNEMHAANISV 588

Query: 524 YISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKC-SDDVEKQ 582
           Y++ LRNE++++AFDY ADP IE+AT+  G+GVDGI TE+PATAS+Y R+ C SD + + 
Sbjct: 589 YVTVLRNEFVTLAFDYFADPTIEIATYTSGIGVDGIITEYPATASRYLRNPCSSDSMPES 648

Query: 583 DFRILPVVPGELLDVTDLKTRPNIIY-HPALTVADIVRPPLPPVTPVSQSAPGSSGLVAP 641
            + I+P   G LL     +T+P      PAL VADIV PPLP VT  +          A 
Sbjct: 649 SYSIIPAEAGSLLKTVPEETQPPASSPTPALDVADIVDPPLPAVTKPASPP------PAT 702

Query: 642 APQGGVPTNVANIGLTLAAIMLFCLLSM 669
           +P+     N+AN+GL+L AI++F  LS+
Sbjct: 703 SPRSSALANIANVGLSLVAIVVFSSLSL 730

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796735|ref|XP_002866252.1| glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312087|gb|EFH42511.1| glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/699 (52%), Positives = 480/699 (68%), Gaps = 36/699 (5%)

Query: 1   MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWF 60
           MA S       MLCNLQ +KDG+G+CLSD+RL+N TTI+  F   Q T  +NG +++GWF
Sbjct: 63  MAISTSSPGLTMLCNLQMTKDGVGLCLSDIRLDNATTISSLFPKAQKTYKVNGQDLKGWF 122

Query: 61  SVDYTLEQL-GQLYLVQNVYTRSEAFDNTQPIPTPDTI-------------YDLFYSQHN 106
            +DY  + +   + LVQN+++R   FD   P+   + +             YD FY +H 
Sbjct: 123 VLDYDADTIFSNVSLVQNIFSRPSIFDGQMPVSAVEDVLGTKPPKFWLSVQYDAFYMEHK 182

Query: 107 ISAAKYITEYLQKL-ISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQ 165
           +SAA    EYL+ L    +  ISSPEIGFLK++        TKL+F   EP A+EPTTN+
Sbjct: 183 LSAA----EYLRSLRFRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKEPEAIEPTTNK 238

Query: 166 TYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAN 225
            Y  + +NL AIK+FASG++VPK YI P+++   YL+PATT V DAH AGL+VYASGFAN
Sbjct: 239 KYSELQQNLAAIKAFASGVLVPKDYIWPLDS-ANYLKPATTFVADAHKAGLEVYASGFAN 297

Query: 226 DIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI-------------DRPLI 272
           D+ +S++Y+++P AEYL F+DN QF+VDG ITDFP TA+++I                L+
Sbjct: 298 DMRTSFNYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCLSHQKGNLPKAGHALV 357

Query: 273 ITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFM 332
           ITHNGASG Y GCTDLAYQ+AVD+GAD+IDC+VQMSK+G+AFC ++ DL   TTA T FM
Sbjct: 358 ITHNGASGDYPGCTDLAYQKAVDEGADVIDCSVQMSKDGIAFCHDAADLTASTTAMTTFM 417

Query: 333 SKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDG 392
           S+ATSVPEIQ   GIFSFDLTW EIQS+KPQI SPF  +     RNP  KN GKF+TL  
Sbjct: 418 SRATSVPEIQPTNGIFSFDLTWAEIQSVKPQIESPFTATG--FQRNPANKNAGKFITLAE 475

Query: 393 FLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSS 452
           FL+F+K KAV+GVLINI NAAYLASKKGLGVVDAV  AL+ +T DKQSTQ+V+IQSDD+S
Sbjct: 476 FLDFSKAKAVAGVLINIENAAYLASKKGLGVVDAVKSALAKSTLDKQSTQKVLIQSDDTS 535

Query: 453 VLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNI 512
           VL+ F+ VP Y +VL I KE+  AP+  V+EIKKYA AV + RTS+++ ++SF T  TN+
Sbjct: 536 VLASFEAVPPYTRVLSIEKEIGGAPKPSVDEIKKYADAVNLMRTSLVTVSQSFATGKTNV 595

Query: 513 LRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR 572
           + ++H ANISVY+S LRNEY+SIAFDY +DP +E+ATF  G GVDG+ TEFPATA++Y R
Sbjct: 596 VEEMHKANISVYVSVLRNEYISIAFDYFSDPTVELATFIAGSGVDGVITEFPATATRYLR 655

Query: 573 SKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNI-IYHPALTVADIVRPPLPPVTPVSQS 631
           S CSD  + Q + ILP   G LL V D + +P     +P L   D++ PPLPPV  ++ S
Sbjct: 656 SPCSDLNKDQPYAILPAEAGALLSVADKEAQPPASAPNPPLDAKDVIDPPLPPVANLAAS 715

Query: 632 APGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLLSMG 670
                    P P  G  +  AN+GL+L A++   +L + 
Sbjct: 716 NATGGAQPHPPPPSGTVSITANLGLSLLAMLALGVLCVA 754

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796723|ref|XP_002866246.1| glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312081|gb|EFH42505.1| glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  732 bits (1889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/696 (52%), Positives = 477/696 (68%), Gaps = 36/696 (5%)

Query: 1   MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWF 60
           MA S       MLCNLQ +KDG+G+CLSD+RL+N TTI+  F   Q T  +NG +++GWF
Sbjct: 63  MAVSTSSPGLTMLCNLQMTKDGVGLCLSDIRLDNATTISSLFPKAQKTYKVNGQDLKGWF 122

Query: 61  SVDYTLEQL-GQLYLVQNVYTRSEAFDNTQPIPTPDTI-------------YDLFYSQHN 106
            +DY  + +   + LVQN+++R   FD   P+   + +             YD FY +H 
Sbjct: 123 VLDYDADTIFSNVSLVQNIFSRPSIFDGQMPVSAVEDVLGTKPPKFWLSVQYDAFYMEHK 182

Query: 107 ISAAKYITEYLQKL-ISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQ 165
           +SAA    EYL+ L    +  ISSPEIGFLK++        TKL+F   EP A+EPTTN+
Sbjct: 183 LSAA----EYLRSLRFRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKEPEAIEPTTNK 238

Query: 166 TYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAN 225
            Y  + +NL AIK+FASG++VPK YI P+++  +YL+PATT V DAH AGL+VYASGFAN
Sbjct: 239 KYSELQQNLAAIKAFASGVLVPKDYIWPLDS-AKYLKPATTFVADAHKAGLEVYASGFAN 297

Query: 226 DIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI-------------DRPLI 272
           D+ +S++Y+++P  EYL F+DN +F+VDG ITDFP TA++AI                L+
Sbjct: 298 DMRTSFNYSYDPSTEYLQFVDNGEFSVDGVITDFPPTASQAITCFSHQKGNLPKAGHALV 357

Query: 273 ITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFM 332
           ITHNGASG Y GCTDLAYQ+A+DDGAD+IDC+VQMSK+G+AFC ++ DL   TTA T FM
Sbjct: 358 ITHNGASGDYPGCTDLAYQKAIDDGADVIDCSVQMSKDGIAFCHDAADLTASTTAMTTFM 417

Query: 333 SKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDG 392
           S+ATSVPEIQ   GIFSFDLTW EIQS+KPQI +PF  +    +RNP  KN GKF TL  
Sbjct: 418 SRATSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPFTSTG--FLRNPANKNAGKFTTLAD 475

Query: 393 FLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSS 452
           FLE +K KAV+GVLINI NAAYLASKKGLG+VDAV  AL+N+T DKQSTQ+V+IQSDDSS
Sbjct: 476 FLELSKEKAVTGVLINIENAAYLASKKGLGIVDAVKSALTNSTLDKQSTQKVLIQSDDSS 535

Query: 453 VLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNI 512
           VLS F+ VP Y +VL I KE+  AP+  VEEIKK+A AV + RTS+++ ++SF T  TN+
Sbjct: 536 VLSSFEAVPPYTRVLSIDKEIGDAPKPSVEEIKKHADAVNLMRTSLVTVSQSFATGKTNV 595

Query: 513 LRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR 572
           + ++H ANISVY+S LRNEY+SIAFDY +DP +E+ATF  G GVDG+ TEFPATA++Y R
Sbjct: 596 VEEMHKANISVYVSVLRNEYISIAFDYFSDPTVELATFIAGSGVDGVITEFPATATRYLR 655

Query: 573 SKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNIIY-HPALTVADIVRPPLPPVTPVSQS 631
           S CSD  + Q + ILP   G LL V D + +P     +P L   D++ PPLPPV  ++ S
Sbjct: 656 SPCSDLNKDQPYAILPAEAGALLSVADKEAQPPASAPNPPLDAKDVIDPPLPPVANMASS 715

Query: 632 APGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLL 667
                G     P  G     AN+ L+L A+M   +L
Sbjct: 716 NGTGEGPPHTPPSSGTGATAANLSLSLLAMMALGIL 751

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565021|ref|XP_002523503.1| glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis] gi|223537210|gb|EEF38842.1| glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/694 (54%), Positives = 492/694 (70%), Gaps = 39/694 (5%)

Query: 7   LSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTL 66
           +SN +MLCNLQ +KDG G+C  DVR+NN T I+  + +   T N+NG +V GWFSVD+T 
Sbjct: 64  VSNVVMLCNLQLTKDGKGICQPDVRINNTTNIDMVYPNNSKTYNVNGKDVTGWFSVDFTF 123

Query: 67  EQL-GQLYLVQNVYTRSEAFDNTQPI-PTPDTI------------YDLFYSQHNISAAKY 112
           E+L   + ++Q++ TR   FDN  P+ P  D +            YD FY++H ++ A Y
Sbjct: 124 EELLSNVTVMQSILTRPSDFDNQLPVTPVDDVLHGKFHSYWINVQYDKFYTEHKLNVASY 183

Query: 113 ITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILK 172
           I    ++    V YISSPEIGFLK+++ KV   T KL+F+ L+ NA+EPTTNQTYGSIL+
Sbjct: 184 IQT--ERAFRRVDYISSPEIGFLKSLNGKVSRRT-KLIFVFLDKNAIEPTTNQTYGSILQ 240

Query: 173 NLTAIKSFASGIVVPKSYIIPVNNKTRYLEP-ATTLVTDAHNAGLQVYASGFANDIYSSY 231
           NL  IKSFASGI VPK YI PV  K  YLE  AT+LV DAH  GL+VYASGFAND  + +
Sbjct: 241 NLATIKSFASGIAVPKDYIWPVT-KANYLEKNATSLVLDAHKLGLEVYASGFANDYVTVF 299

Query: 232 SYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI--------------DRPLIITHNG 277
            Y ++P AEYL FIDN QFA+DG ITDFP+TA+ A+              D PLIIT+NG
Sbjct: 300 DYFYDPAAEYLQFIDNKQFAIDGIITDFPSTASAALACFANFSDVSMPRKDGPLIITYNG 359

Query: 278 ASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATS 337
           ASGVYAGCTDLAYQ+A+DDGADIIDCTVQMSK+GVAFC++S DL G TTA T F+S++++
Sbjct: 360 ASGVYAGCTDLAYQRALDDGADIIDCTVQMSKDGVAFCMDSADLTGDTTAMTTFVSRSST 419

Query: 338 VPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFA 397
           +PEIQ   GIFSFDLTWTEIQ+L+PQ+ SP    N    RNP +KN GKF+TL  FL+FA
Sbjct: 420 IPEIQPAAGIFSFDLTWTEIQTLRPQLVSPLGNGNL-FPRNPASKNAGKFMTLPEFLDFA 478

Query: 398 KTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKF 457
           KTKA SG+LINI NAA+LA+KKGL +V AVT ALSNATFDKQ+TQQV+IQSDD+SVLSKF
Sbjct: 479 KTKAASGILINIENAAFLAAKKGLDIVTAVTTALSNATFDKQATQQVLIQSDDTSVLSKF 538

Query: 458 QDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLH 517
            ++PAYK+VL++ +E+SAAP++ V+EIKK+A AV + RTS++ T   +    TN++ ++H
Sbjct: 539 LNIPAYKRVLYLGEEISAAPKKSVDEIKKFADAVNLPRTSLVPTNNGYAVTTTNVVHEMH 598

Query: 518 SANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSD 577
           +AN++VY+S LRNE+ ++ FD+ +DP +E+AT+  G+  DGI TE+PATAS+Y R+ CS+
Sbjct: 599 AANLTVYVSLLRNEFATLPFDFFSDPTVEIATYIAGLEADGIITEYPATASRYLRNVCSN 658

Query: 578 DVEKQDFRILPVVPGELLDVTDLKTRPNIIY-HPALTVADIVRPPLPPVTPVSQSAPGSS 636
                 F +LP+ P  LL   + +  P      P L VAD+V PPLP V   + ++  SS
Sbjct: 659 LNYDLPFTVLPIEPPLLLQFINSEMLPPAAAPSPVLDVADVVDPPLPAVAKTTDTS--SS 716

Query: 637 GLVAP-APQGGVPTNVANIGLT-LAAIMLFCLLS 668
           G  AP  P      N+AN+G T LA ++L  LLS
Sbjct: 717 GSPAPTTPPSAATANIANLGATVLATMVLLGLLS 750

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143985|ref|XP_002325146.1| predicted protein [Populus trichocarpa] gi|222866580|gb|EEF03711.1| predicted protein [Populus trichocarpa]

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/699 (53%), Positives = 491/699 (70%), Gaps = 36/699 (5%)

Query: 1   MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWF 60
           MA +  LS   +LCNLQ +K+G+G+C  D+RL+N T I   F+    T  +NG ++ GWF
Sbjct: 56  MALATSLSGVAVLCNLQLTKEGVGICQGDIRLDNTTNIAMVFEKGSRTYKVNGQDITGWF 115

Query: 61  SVDYTLEQL-GQLYLVQNVYTRSEAFDNTQPIPTPDTI-------------YDLFYSQHN 106
           ++D+T +QL   + L+QN+++R  AFD   PI T D +             YD FY+++ 
Sbjct: 116 AIDFTADQLLANVSLLQNIFSRPSAFDAMLPISTVDDVRSSNPPAFWLNVQYDAFYTENK 175

Query: 107 ISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQT 166
           +S A YI +  +  +  V YISSPEIGFLK ++  V+   TKLVF+ L+ NA EPTT QT
Sbjct: 176 LSVANYIQKATR--LQGVNYISSPEIGFLKKINGLVNKAKTKLVFVFLDKNATEPTTKQT 233

Query: 167 YGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAND 226
           YGSIL NL  IK+FASGIVVPK YI PVN    YLE  T+LV DAH  GL+VYASGFAND
Sbjct: 234 YGSILGNLATIKAFASGIVVPKDYIWPVN-AANYLEAPTSLVNDAHKLGLEVYASGFAND 292

Query: 227 IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI-------------DRPLII 273
             +SY+Y+++P AEYL FIDNSQF+VDG ITDFP TA+EA+             ++ LII
Sbjct: 293 FTTSYNYSYDPSAEYLQFIDNSQFSVDGLITDFPPTASEAVACFAQYTDIKPTKEQALII 352

Query: 274 THNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMS 333
           +HNGASGVYAG TDLAYQQAV+DGA+IIDC+VQMSK+GVAFCL+S D+   TTAA  FMS
Sbjct: 353 SHNGASGVYAGSTDLAYQQAVEDGANIIDCSVQMSKDGVAFCLDSVDVTRDTTAAASFMS 412

Query: 334 KATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFD-KSNPPIIRNPEAKNKGKFVTLDG 392
            +T++PEIQ+  GIFSFDL+W++IQ+L+PQ++SPF+ K   P  RNP  K+KGKF+TL  
Sbjct: 413 LSTTIPEIQESAGIFSFDLSWSDIQTLQPQLTSPFENKGGLP--RNPANKSKGKFLTLAE 470

Query: 393 FLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSS 452
           FLE AK KAV+G+LINI NAAYLAS+KGL +V AV  A  NAT  K+STQ+V+IQSDD+S
Sbjct: 471 FLELAKVKAVTGILINIENAAYLASQKGLDIVSAVNTAFGNATLGKESTQKVLIQSDDTS 530

Query: 453 VLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNI 512
           VLSKF++VPAY +VL+++ E+S APR  VEEIKKYA AVT+ R S++ T   FTT  T +
Sbjct: 531 VLSKFKNVPAYSRVLYLKDEISDAPRTPVEEIKKYADAVTLPRFSIVPTVNGFTTGTTKV 590

Query: 513 LRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR 572
           + ++ +ANISVY+S LRNE++++ FDY +DP IE+AT+  G+GVDGI TE+PATAS+Y R
Sbjct: 591 VNEMQAANISVYVSVLRNEFITLPFDYFSDPTIEIATYTSGIGVDGIITEYPATASRYLR 650

Query: 573 SKC-SDDVEKQDFRILPVVPGELLDVTDLKTRPNI-IYHPALTVADIVRPPLPPVTPVSQ 630
           + C S+ +    + I+P   G LL     +T+P      PAL VAD+V PPLP VT  + 
Sbjct: 651 NPCSSNSMPDSSYSIIPAEAGSLLKTVPEETQPPASTPTPALDVADVVDPPLPAVTKPAS 710

Query: 631 SAPGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLLSM 669
             P S           +  N+AN+GL+L AIM F LLS+
Sbjct: 711 PPPASPPPATSPHSNAL-QNIANVGLSLVAIMAFTLLSL 748

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242971|ref|NP_200625.1| protein SEUSS-like 5 [Arabidopsis thaliana] gi|8777318|dbj|BAA96908.1| unnamed protein product [Arabidopsis thaliana] gi|332009624|gb|AED97007.1| protein SEUSS-like 5 [Arabidopsis thaliana]

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/680 (53%), Positives = 474/680 (69%), Gaps = 36/680 (5%)

Query: 12  MLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQL-G 70
           MLCNLQ +KDG+G+CLSD+ L+N TTI+  F   Q T  +NG +++GWF +DY  + +  
Sbjct: 74  MLCNLQMTKDGVGLCLSDIILDNATTISSVFPKAQKTYKVNGQDLKGWFVLDYDADTIFN 133

Query: 71  QLYLVQNVYTRSEAFDNTQPIPTPDTI-------------YDLFYSQHNISAAKYITEYL 117
            + LVQN+++R   FD    +   + +             YD FY +H +S A    EYL
Sbjct: 134 NVTLVQNIFSRPSIFDGQMSVSAVEDVLGTKPPKFWLSVQYDAFYMEHKLSPA----EYL 189

Query: 118 QKL-ISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTA 176
           + L    +  ISSPEIGFLK++        TKL+F   +P AVEPTTN+ Y  I +NL A
Sbjct: 190 RSLQFRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKDPEAVEPTTNKKYSEIQQNLAA 249

Query: 177 IKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFE 236
           IK+FASG++VPK YI P+++  +YL+PATT V DAH AGL+VYASGFAND+ +S++Y+++
Sbjct: 250 IKAFASGVLVPKDYIWPIDS-AKYLKPATTFVADAHKAGLEVYASGFANDLRTSFNYSYD 308

Query: 237 PEAEYLTFIDNSQFAVDGFITDFPTTATEAI-------------DRPLIITHNGASGVYA 283
           P AEYL F+DN QF+VDG ITDFP TA+++I                L+ITHNGASG Y 
Sbjct: 309 PSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNLPKAGHALVITHNGASGDYP 368

Query: 284 GCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQK 343
           GCTDLAYQ+AVDDGAD+IDC+VQMSK+G+AFC ++ DL   TTA T+FMS+ATSVPEIQ 
Sbjct: 369 GCTDLAYQKAVDDGADVIDCSVQMSKDGIAFCHDAADLTASTTAMTIFMSRATSVPEIQP 428

Query: 344 ERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVS 403
             GIFSFDLTW EIQS+KPQI +PF  +     RNP  KN GKF+TL  FL+F+K KAV+
Sbjct: 429 TNGIFSFDLTWAEIQSVKPQIENPFTATG--FQRNPANKNAGKFITLADFLDFSKAKAVT 486

Query: 404 GVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAY 463
           GV+INI NAAYLASKKGLGVVDAV  AL+ +T DKQSTQ+V+IQSDDSSVL+ F+ VP Y
Sbjct: 487 GVMINIENAAYLASKKGLGVVDAVKSALAKSTLDKQSTQKVLIQSDDSSVLASFEAVPPY 546

Query: 464 KKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISV 523
            +VL I KE+  AP+  V+EIKKYA AV + RTS+++ ++SFTT  TN++ ++H  NISV
Sbjct: 547 TRVLSIDKEIGGAPKPSVDEIKKYAEAVNLLRTSLVTVSQSFTTGKTNVVEEMHKGNISV 606

Query: 524 YISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQD 583
           Y+S LRNEY+S+AFDY +DP IE+ATF  G GVDG+ TEFPATA++Y +S CSD  ++Q 
Sbjct: 607 YVSVLRNEYISVAFDYFSDPTIELATFISGSGVDGVITEFPATATRYLKSPCSDLNKEQP 666

Query: 584 FRILPVVPGELLDVTDLKTRPNIIY-HPALTVADIVRPPLPPVTPVSQSAPGSSGLVAPA 642
           + ILP   G L+ V D + +P     +P L   D++ PPLPPV  ++ S         P 
Sbjct: 667 YAILPAEAGGLVVVADKEAQPPASAPNPPLEAKDVIDPPLPPVANLAASNATGGAQSHPP 726

Query: 643 PQGGVPTNVANIGLTLAAIM 662
           P  G   N AN+GL+L A++
Sbjct: 727 PASGTVANAANLGLSLLAML 746

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327932|ref|NP_200613.2| protein SEUSS-like 4 [Arabidopsis thaliana] gi|9759530|dbj|BAB10996.1| unnamed protein product [Arabidopsis thaliana] gi|18377698|gb|AAL66999.1| putative aluminium tolerance associated protein [Arabidopsis thaliana] gi|25054941|gb|AAN71947.1| putative aluminium tolerance associated protein [Arabidopsis thaliana] gi|332009608|gb|AED96991.1| protein SEUSS-like 4 [Arabidopsis thaliana]

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/675 (53%), Positives = 467/675 (69%), Gaps = 37/675 (5%)

Query: 12  MLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQL-G 70
           MLCNLQ +KDG+G+CLSD+RL+N TTI+  F   Q T  +NG +++GWF +DY  + +  
Sbjct: 74  MLCNLQMTKDGVGLCLSDIRLDNATTISSVFPKAQKTYKVNGQDLKGWFVIDYDADTIFN 133

Query: 71  QLYLVQNVYTRSEAFDNTQPIPTPDTI-------------YDLFYSQHNISAAKYITEYL 117
           ++ LVQN+++R   FD    +   + +             YD FY +H +S A    EYL
Sbjct: 134 KVTLVQNIFSRPSIFDGQMSVSAVEDVLGTKPPKFWLSVQYDAFYMEHKLSPA----EYL 189

Query: 118 QKL-ISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTA 176
           + L    +  ISSPEIGFLK++        TKL+F   +P AVEPTTN+ Y  I +NL A
Sbjct: 190 RSLRFRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKDPEAVEPTTNKKYSEIQQNLAA 249

Query: 177 IKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFE 236
           IK+FASG++VPK YI P+++  +YL+PATT V DAH AGL+VYASGFAND+ +S++Y+++
Sbjct: 250 IKAFASGVLVPKDYIWPIDS-AKYLKPATTFVADAHKAGLEVYASGFANDLRTSFNYSYD 308

Query: 237 PEAEYLTFIDNSQFAVDGFITDFPTTATEAI-------------DRPLIITHNGASGVYA 283
           P AEYL F+DN QF+VDG ITDFP TA+++I                L+ITHNGASG Y 
Sbjct: 309 PSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNLPKAGHALVITHNGASGDYP 368

Query: 284 GCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQK 343
           GCTDLAYQ+A+DDGADIIDC+VQMSK+G+AFC ++ DL   TTA T FMS+ATSVPEIQ 
Sbjct: 369 GCTDLAYQKAIDDGADIIDCSVQMSKDGIAFCHDAADLSASTTARTTFMSRATSVPEIQP 428

Query: 344 ERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVS 403
             GIFSFDLTW EIQS+KPQI +PF  +     RNP  KN GKF TL  FLE  K KAV+
Sbjct: 429 TNGIFSFDLTWAEIQSVKPQIENPFTATG--FQRNPANKNAGKFTTLADFLELGKAKAVT 486

Query: 404 GVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAY 463
           GVLINI NAAYLASKKGLGVVD V  AL+N+T DKQSTQ+V+IQSDDSSVLS F+ VP Y
Sbjct: 487 GVLINIQNAAYLASKKGLGVVDVVKSALTNSTLDKQSTQKVLIQSDDSSVLSSFEAVPPY 546

Query: 464 KKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISV 523
            +VL I KE+  AP+  +EEIKK+A AV + RTS+I+ ++SF T  TN++ ++H ANISV
Sbjct: 547 TRVLSIDKEIGDAPKTSIEEIKKHADAVNLLRTSLITVSQSFATGKTNVVEEMHKANISV 606

Query: 524 YISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQD 583
           Y+S LRNEY++IAFDY +DP IE+ATF  G GVDG+ TEFPATA++Y RS CSD  + Q 
Sbjct: 607 YVSVLRNEYIAIAFDYFSDPTIELATFIAGRGVDGVITEFPATATRYLRSPCSDLNKDQP 666

Query: 584 FRILPVVPGELLDVTDLKTR-PNIIYHPALTVADIVRPPLPPVTPVSQSAPGSSGLVAPA 642
           + ILP   G LL V D + + P I  +P L   D++ PPLPPV  ++ +         P 
Sbjct: 667 YAILPADAGALLTVADKEAQLPAIPPNPPLDAKDVIDPPLPPVAKLASNGTEGGPPQTP- 725

Query: 643 PQGGVPTNVANIGLT 657
           P+ G     AN+ L+
Sbjct: 726 PRSGTVAIAANLSLS 740

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735902|emb|CBI18678.3| unnamed protein product [Vitis vinifera]

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/684 (53%), Positives = 481/684 (70%), Gaps = 35/684 (5%)

Query: 1   MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWF 60
           +A S  LSN I+ CNLQ +KD +G+C +D+RL+N T I   F   Q T  ING NV+GWF
Sbjct: 55  IALSTSLSNVILYCNLQLTKDSVGICQTDIRLDNSTNIAAVFPKSQKTYTINGENVQGWF 114

Query: 61  SVDYTLEQL-GQLYLVQNVYTRSEAFDNTQPIPTPDTI-------------YDLFYSQHN 106
           ++DYT +QL   + L Q++Y+R   FD T P+ T D               YD FY+ + 
Sbjct: 115 ALDYTSDQLFNNVTLTQSIYSRPSLFDGTLPLSTVDDAIGIKPPGFWLNVQYDAFYAANK 174

Query: 107 ISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQT 166
           +S + YI +  + +   + YISSPEIGFLK M++ ++   TKL+F  L+ +AVEPTT Q 
Sbjct: 175 LSVSSYIQKTTRFM--GISYISSPEIGFLKNMNKIINKAKTKLIFRFLDADAVEPTTKQP 232

Query: 167 YGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAND 226
           Y SILK+L++IKS ASGI+VPK YI P++ K +YL   +++V DAH  GL+VYASGFAND
Sbjct: 233 YSSILKDLSSIKSIASGILVPKEYIWPLS-KDQYLLTPSSVVADAHKQGLEVYASGFAND 291

Query: 227 IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI---------DRP-----LI 272
           +  SY+Y+++P AEYL F+DNS F+VDG +TDFP TA+EAI          RP     L+
Sbjct: 292 MPGSYNYSYDPTAEYLQFVDNSDFSVDGVLTDFPPTASEAIACLAHNKNATRPSKGKILV 351

Query: 273 ITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFM 332
           I+HNGASGVY G TDLAYQQAVDDGADIIDC+VQMSK+GVAFCL S DL+G + A T FM
Sbjct: 352 ISHNGASGVYPGSTDLAYQQAVDDGADIIDCSVQMSKDGVAFCLNSADLLGSSNAMTSFM 411

Query: 333 SKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDG 392
           S++T V EIQ + GIFSFDLTW+EIQ+L PQ++SP   S   + RNP  KN+GKF+TL  
Sbjct: 412 SRSTMVSEIQPKSGIFSFDLTWSEIQTLTPQLTSPLPNSG--LARNPANKNQGKFITLSD 469

Query: 393 FLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSS 452
           FL+FAK KAVSG+LI+I NAAYLASKKGL ++DAVT ALSNATFDKQ+TQQVMIQSDD+S
Sbjct: 470 FLDFAKAKAVSGILIDIENAAYLASKKGLSIIDAVTAALSNATFDKQATQQVMIQSDDTS 529

Query: 453 VLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNI 512
           VLSKF++VP YK+VL I++ +   P++ VEEIKK+A AV + R+S+++T   FTT  T +
Sbjct: 530 VLSKFKNVPGYKRVLSIKEIIGDVPKQTVEEIKKFADAVNLPRSSIVTTNGGFTTTFTTV 589

Query: 513 LRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR 572
           + +LH+ANIS Y+S LRNEY++IAFD+ +DP++E+AT+   +G+DG+ T++P TA  Y R
Sbjct: 590 VDELHAANISAYVSVLRNEYVAIAFDFFSDPVVELATYVGRLGIDGVVTDYPKTADAYLR 649

Query: 573 SKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNI-IYHPALTVADIVRPPLPPVTPVSQS 631
           S CSD   K  + ILP   G LL + + +  P      P LTV D+V PPLP V+  + S
Sbjct: 650 SPCSDLNAKVAYSILPAEAGALLGLAEPEVLPPAEAPGPPLTVDDVVDPPLPQVSSSNGS 709

Query: 632 -APGSSGLVAPAPQGGVPTNVANI 654
            A  ++G V   P+     N AN+
Sbjct: 710 TADPAAGPVKAPPRSSGRANAANM 733

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242093682|ref|XP_002437331.1| hypothetical protein SORBIDRAFT_10g025000 [Sorghum bicolor] gi|241915554|gb|EER88698.1| hypothetical protein SORBIDRAFT_10g025000 [Sorghum bicolor]

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 317/643 (49%), Positives = 439/643 (68%), Gaps = 24/643 (3%)

Query: 1   MAKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWF 60
            A SN L   ++ C+LQ S D +G C + + L++ T I   F     T  +NG+ + GWF
Sbjct: 65  FALSNSLPEVVLFCDLQLSSDNVGFCKTGLALDDSTLIAKVFPKNDKTYKVNGDGLHGWF 124

Query: 61  SVDYTLEQL-GQLYLVQNVYTRSEAFDNTQPIPTPDTIYDL-------------FYSQHN 106
           SVD+T  QL   + L+QNV +R   FD T  I   D + +L             F+  H 
Sbjct: 125 SVDFTSNQLMDNVTLIQNVLSRPSIFDGTMGISLIDDVVELHPPQLWINIQYGQFFLDHK 184

Query: 107 ISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQT 166
           ++  +YI+   ++    V Y+SSPE+GFLK++  K+  +  KLVF  L+   +EP+T Q 
Sbjct: 185 LNIEEYISSKAKEF--GVNYVSSPEVGFLKSLSGKLGKSNVKLVFRFLDQQLIEPSTKQP 242

Query: 167 YGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAND 226
           YG+ILK+L ++K+FASGI+VPK+YI PVN K +YL+PATTLV DAH   L+VYA  F ND
Sbjct: 243 YGTILKDLKSVKAFASGILVPKTYIWPVN-KDQYLQPATTLVKDAHGLDLEVYAFKFGND 301

Query: 227 IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID--RPLIITHNGASGVYAG 284
             SSY+Y+++P AEYL FID+S F+VDG +TDFP+TA+ AID  RPLIITHNGA G++ G
Sbjct: 302 FISSYNYSYDPSAEYLQFIDSSDFSVDGVLTDFPSTASAAIDDTRPLIITHNGACGLFPG 361

Query: 285 CTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKE 344
           CTDLAYQQAV+DGADIIDC+VQMSK+ V FCL+SPDL   TTAATVF +KA +V EIQ  
Sbjct: 362 CTDLAYQQAVEDGADIIDCSVQMSKDAVPFCLDSPDLTKGTTAATVFSTKAATVNEIQNG 421

Query: 345 RGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSG 404
            GIF+FDL  +EIQ+LKP +  P+++    + RNP AKN GK +TL  FL F+K+  +SG
Sbjct: 422 SGIFAFDLLSSEIQTLKPDLVGPYNQEG--LKRNPAAKNSGKLMTLVDFLAFSKSNNISG 479

Query: 405 VLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYK 464
           VL+++ NA YLA+ +G+ +VDAV+ AL NA++DK++ QQV+I SDDS+VL  F+  PA+K
Sbjct: 480 VLVDVRNAPYLAT-RGIDIVDAVSSALINASYDKETRQQVLIASDDSAVLRAFKKFPAFK 538

Query: 465 KVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVY 524
           +VL I   +S   +  VEE+ K+ASAV++TR SV+    SF    T+++  +H+AN+SVY
Sbjct: 539 RVLQIGNAISDVSKASVEEMAKFASAVSITRGSVVQAQGSFLLRFTDVIDKMHAANLSVY 598

Query: 525 ISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQDF 584
           +  LRNE++++ FD+ A+P++E+ T++  +  DGI TEFPATA++YFRS CSD  +   +
Sbjct: 599 VGLLRNEFMNLGFDFWANPMVEIVTYSS-LMADGIVTEFPATAAEYFRSPCSDFSKNLTY 657

Query: 585 RILPVVPGELLDVTDLKTRPNIIY-HPALTVADIVRPPLPPVT 626
            I+P  PG LL +TD    P      P L  AD+V PPLPPVT
Sbjct: 658 TIMPAKPGSLLKLTDPSALPPAQGPAPVLKPADVVDPPLPPVT 700

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546095|ref|XP_003541467.1| PREDICTED: probable glycerophosphoryl diester phosphodiesterase 3-like [Glycine max]

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 336/697 (48%), Positives = 454/697 (65%), Gaps = 47/697 (6%)

Query: 10  AIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQL 69
           ++ LCNLQ +KDG   C++   L+N TTI+     ++ T N++G +VRG FS+DY    +
Sbjct: 80  SVFLCNLQVAKDGGAFCVTGTTLDNTTTIS-LVDPKEKTYNVDGKDVRGHFSLDYPGLLI 138

Query: 70  GQ-LYLVQNVYTRSEAFDNTQPIPTPDTIYD--------------LFYSQHNISAAKYIT 114
            Q + + Q +++R   +D T P+   D +                  Y+++ +     + 
Sbjct: 139 DQNVSMTQAIFSRPNFYDGTSPVLNLDALLSGKSPPRLWLNVQNAALYTENGVQVVDIVL 198

Query: 115 EYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNL 174
           E L      + ++SS  IGFLK++  K  +  TK+VF +L  N VEP+T + YGSI+K+L
Sbjct: 199 ELLS--FYQIEFVSSTSIGFLKSISGK-SNKATKVVFKLLNNNKVEPSTKKPYGSIVKDL 255

Query: 175 TAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYN 234
             IKSFASGI+VPK YI PV    +YL P TTLV DAH +GL+VYASGFAND +SSYSYN
Sbjct: 256 ATIKSFASGIMVPKEYIWPVK-PDKYLGPPTTLVADAHKSGLEVYASGFANDFFSSYSYN 314

Query: 235 FEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI------------DRPLIITHNGASGVY 282
           ++P AEYL F+D    +VDG +TDFP TA+ AI               LII++NGASGVY
Sbjct: 315 YDPIAEYLQFLDRGD-SVDGVVTDFPATASNAIACFAHNNTLPKKGPTLIISNNGASGVY 373

Query: 283 AGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQ 342
            G TDLAYQQA+DDGADIIDC+VQM+K+G+AFC  S DL   TTA   FMS++++VPE+Q
Sbjct: 374 PGSTDLAYQQAIDDGADIIDCSVQMTKDGIAFCSNSTDLTSDTTAMPKFMSRSSNVPELQ 433

Query: 343 KERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAV 402
            + GIFSFDLTW+EIQ+LKPQ+ S         +RNP  K  GKFVTL  FLE AK KAV
Sbjct: 434 PKSGIFSFDLTWSEIQTLKPQMVS----KGSDFLRNPANKTSGKFVTLSAFLELAKAKAV 489

Query: 403 SGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPA 462
            G+L+NI NA YLAS+KGL +VDAV+ ALSNATFDKQ+ QQV+IQSDDSSVLS+F+D+P+
Sbjct: 490 PGILVNIQNAPYLASQKGLDIVDAVSTALSNATFDKQAKQQVLIQSDDSSVLSRFKDIPS 549

Query: 463 YKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANIS 522
           YK+V+ ++ ++   PR+ VEEIKK+A AV + +TS+I  + S     TN++++L  AN++
Sbjct: 550 YKRVMLLKDKMGDVPRQTVEEIKKHADAVNLPKTSIIKVSNSILVGMTNVVKELKDANLT 609

Query: 523 VYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVEKQ 582
           V++  L+NEY ++AFDY +DP +E+AT+ Q   VDGI T+FPATAS++ RS CSD     
Sbjct: 610 VFVHNLKNEYTTLAFDYWSDPNVEIATYVQTAKVDGIVTDFPATASRFMRSPCSD--PTH 667

Query: 583 DFRILPVVPGELLDVTDLKTRPNIIYHPALT-VADIVRPPLPPVTPVSQS-------APG 634
           D  ILP  PG+LL+    +  P          VAD+V PPLP VT  S S        PG
Sbjct: 668 DPTILPAKPGDLLNTIPTELLPPAQAPLPPLEVADVVDPPLPAVTKNSNSTKAEPAAGPG 727

Query: 635 SSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLLSMGH 671
           +     PA   G   NVAN GL++ AI++F +L   H
Sbjct: 728 AKPASPPASPSGARVNVANSGLSIVAILVFAMLFAAH 764

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	671
TAIR|locus:2161248	750	SVL5 "SHV3-like 5" [Arabidopsi	0.833	0.745	0.556	1.4e-165
TAIR|locus:2155816	753	SVL4 "SHV3-like 4" [Arabidopsi	0.837	0.746	0.555	1.9e-163
TAIR|locus:2116377	759	SHV3 "SHAVEN 3" [Arabidopsis t	0.839	0.741	0.417	4.9e-117
TAIR|locus:2173977	766	SVL1 "SHV3-like 1" [Arabidopsi	0.821	0.719	0.417	1e-114
TAIR|locus:2085710	729	SVL3 "SHV3-like 3" [Arabidopsi	0.640	0.589	0.428	2.2e-89
TAIR|locus:2019642	392	GDPD5 "glycerophosphodiester p	0.165	0.283	0.35	7.2e-14
TAIR|locus:2142823	372	GDPD6 "glycerophosphodiester p	0.157	0.284	0.336	1.2e-13

TAIR|locus:2161248 SVL5 "SHV3-like 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1611 (572.2 bits), Expect = 1.4e-165, P = 1.4e-165
 Identities = 322/579 (55%), Positives = 411/579 (70%)

Query:    98 YDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPN 157
             YD FY +H +S A+Y+   LQ    NV  ISSPEIGFLK++        TKL+F   +P 
Sbjct:   174 YDAFYMEHKLSPAEYLRS-LQFRGINV--ISSPEIGFLKSIGMDAGRAKTKLIFEFKDPE 230

Query:   158 AVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQ 217
             AVEPTTN+ Y  I +NL AIK+FASG++VPK YI P+++  +YL+PATT V DAH AGL+
Sbjct:   231 AVEPTTNKKYSEIQQNLAAIKAFASGVLVPKDYIWPIDS-AKYLKPATTFVADAHKAGLE 289

Query:   218 VYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI--------DR 269
             VYASGFAND+ +S++Y+++P AEYL F+DN QF+VDG ITDFP TA+++I        + 
Sbjct:   290 VYASGFANDLRTSFNYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNL 349

Query:   270 P-----LIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGK 324
             P     L+ITHNGASG Y GCTDLAYQ+AVDDGAD+IDC+VQMSK+G+AFC ++ DL   
Sbjct:   350 PKAGHALVITHNGASGDYPGCTDLAYQKAVDDGADVIDCSVQMSKDGIAFCHDAADLTAS 409

Query:   325 TTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNK 384
             TTA T+FMS+ATSVPEIQ   GIFSFDLTW EIQS+KPQI +PF  +     RNP  KN 
Sbjct:   410 TTAMTIFMSRATSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPFTATG--FQRNPANKNA 467

Query:   385 GKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQV 444
             GKF+TL  FL+F+K KAV+GV+INI NAAYLASKKGLGVVDAV  AL+ +T DKQSTQ+V
Sbjct:   468 GKFITLADFLDFSKAKAVTGVMINIENAAYLASKKGLGVVDAVKSALAKSTLDKQSTQKV 527

Query:   445 MIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYAXXXXXXXXXXXXXXES 504
             +IQSDDSSVL+ F+ VP Y +VL I KE+  AP+  V+EIKKYA              +S
Sbjct:   528 LIQSDDSSVLASFEAVPPYTRVLSIDKEIGGAPKPSVDEIKKYAEAVNLLRTSLVTVSQS 587

Query:   505 FTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP 564
             FTT  TN++ ++H  NISVY+S LRNEY+S+AFDY +DP IE+ATF  G GVDG+ TEFP
Sbjct:   588 FTTGKTNVVEEMHKGNISVYVSVLRNEYISVAFDYFSDPTIELATFISGSGVDGVITEFP 647

Query:   565 ATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNIIY-HPALTVADIVRPPLP 623
             ATA++Y +S CSD  ++Q + ILP   G L+ V D + +P     +P L   D++ PPLP
Sbjct:   648 ATATRYLKSPCSDLNKEQPYAILPAEAGGLVVVADKEAQPPASAPNPPLEAKDVIDPPLP 707

Query:   624 PVTPVSQSAPGSSGLVAPAPQGGVPTNVANIGLTLAAIM 662
             PV  ++ S         P P  G   N AN+GL+L A++
Sbjct:   708 PVANLAASNATGGAQSHPPPASGTVANAANLGLSLLAML 746

GO:0005886 "plasma membrane" evidence=ISM

GO:0006071 "glycerol metabolic process" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0008889 "glycerophosphodiester phosphodiesterase activity" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0048046 "apoplast" evidence=IDA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2155816 SVL4 "SHV3-like 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1591 (565.1 bits), Expect = 1.9e-163, P = 1.9e-163
 Identities = 325/585 (55%), Positives = 407/585 (69%)

Query:    98 YDLFYSQHNISAAKYITEYLQKL-ISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEP 156
             YD FY +H +S A    EYL+ L    +  ISSPEIGFLK++        TKL+F   +P
Sbjct:   174 YDAFYMEHKLSPA----EYLRSLRFRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKDP 229

Query:   157 NAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGL 216
              AVEPTTN+ Y  I +NL AIK+FASG++VPK YI P+++  +YL+PATT V DAH AGL
Sbjct:   230 EAVEPTTNKKYSEIQQNLAAIKAFASGVLVPKDYIWPIDS-AKYLKPATTFVADAHKAGL 288

Query:   217 QVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI--------D 268
             +VYASGFAND+ +S++Y+++P AEYL F+DN QF+VDG ITDFP TA+++I        +
Sbjct:   289 EVYASGFANDLRTSFNYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGN 348

Query:   269 RP-----LIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIG 323
              P     L+ITHNGASG Y GCTDLAYQ+A+DDGADIIDC+VQMSK+G+AFC ++ DL  
Sbjct:   349 LPKAGHALVITHNGASGDYPGCTDLAYQKAIDDGADIIDCSVQMSKDGIAFCHDAADLSA 408

Query:   324 KTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKN 383
              TTA T FMS+ATSVPEIQ   GIFSFDLTW EIQS+KPQI +PF  +     RNP  KN
Sbjct:   409 STTARTTFMSRATSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPFTATG--FQRNPANKN 466

Query:   384 KGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQ 443
              GKF TL  FLE  K KAV+GVLINI NAAYLASKKGLGVVD V  AL+N+T DKQSTQ+
Sbjct:   467 AGKFTTLADFLELGKAKAVTGVLINIQNAAYLASKKGLGVVDVVKSALTNSTLDKQSTQK 526

Query:   444 VMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYAXXXXXXXXXXXXXXE 503
             V+IQSDDSSVLS F+ VP Y +VL I KE+  AP+  +EEIKK+A              +
Sbjct:   527 VLIQSDDSSVLSSFEAVPPYTRVLSIDKEIGDAPKTSIEEIKKHADAVNLLRTSLITVSQ 586

Query:   504 SFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF 563
             SF T  TN++ ++H ANISVY+S LRNEY++IAFDY +DP IE+ATF  G GVDG+ TEF
Sbjct:   587 SFATGKTNVVEEMHKANISVYVSVLRNEYIAIAFDYFSDPTIELATFIAGRGVDGVITEF 646

Query:   564 PATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTR-PNIIYHPALTVADIVRPPL 622
             PATA++Y RS CSD  + Q + ILP   G LL V D + + P I  +P L   D++ PPL
Sbjct:   647 PATATRYLRSPCSDLNKDQPYAILPADAGALLTVADKEAQLPAIPPNPPLDAKDVIDPPL 706

Query:   623 PPVTPVSQSAPGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLL 667
             PPV  ++ +         P P+ G     AN+ L+L A+M   LL
Sbjct:   707 PPVAKLASNGTEGGPPQTP-PRSGTVAIAANLSLSLLAMMALGLL 750

GO:0005886 "plasma membrane" evidence=ISM

GO:0006071 "glycerol metabolic process" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0008889 "glycerophosphodiester phosphodiesterase activity" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2116377 SHV3 "SHAVEN 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1153 (410.9 bits), Expect = 4.9e-117, P = 4.9e-117
 Identities = 245/587 (41%), Positives = 364/587 (62%)

Query:    98 YDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPN 157
             +D FY+QHN+S + ++    + ++  + +ISSPE+ F K +  +   N   LVF  L  +
Sbjct:   178 HDAFYAQHNLSMSSFLVAASKTVL--IDFISSPEVNFFKKIAGRFGRNGPSLVFRFLGQD 235

Query:   158 AVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQ 217
               EPTTN+TYGSIL NLT +K+FASGI+VPKSYI+P++++ +YL P T+LV DAH AGL+
Sbjct:   236 EFEPTTNRTYGSILSNLTFVKTFASGILVPKSYILPLDDQ-QYLLPHTSLVQDAHKAGLE 294

Query:   218 VYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID------RP- 270
             V+ SGFANDI  ++ Y+F+P +EYL+F+DN  F+VDG ++DFP TA+ ++D      R  
Sbjct:   295 VFVSGFANDIDIAHDYSFDPVSEYLSFVDNGNFSVDGVLSDFPITASASLDCFSHVGRNA 354

Query:   271 ------LIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGK 324
                   L+IT +GASG Y GCTDLAY++A+ DGAD+IDC+VQ+S +G  FCL S DL   
Sbjct:   355 TKQVDFLVITKDGASGDYPGCTDLAYKKAIKDGADVIDCSVQLSSDGTPFCLSSIDLGNS 414

Query:   325 TTAA-TVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKN 383
             TT + T F +++T+VPE+     I++F LTW EIQ+L P IS+P+  ++  + RNP+ KN
Sbjct:   415 TTVSLTAFRNRSTTVPELGSLGAIYTFSLTWAEIQTLTPAISNPYRVTS--LFRNPKQKN 472

Query:   384 KGKFVTLDGFLEFAKTK-AVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQ 442
              GK  +L  FL  AK   ++SGVLI++ NAAYL  ++GL VV AV   L+   +   +  
Sbjct:   473 AGKLFSLSDFLSLAKNSTSLSGVLISVENAAYLREEQGLDVVKAVLDTLTQTGYSNSTAT 532

Query:   443 QVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYAXXXXXXXXXXXXXX 502
             +VMIQS +SSVL  F+    Y+ V  + + +       +E+IKK+A              
Sbjct:   533 KVMIQSTNSSVLVDFKKQSQYETVYKVEENIRDILDSAIEDIKKFADAVVIQKLSVFPVA 592

Query:   503 ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTE 562
             +SF T  TN++  L  + + VY+   +NE+LS  +D+ AD  +E+ ++  G G++G  TE
Sbjct:   593 QSFITTQTNVVEKLQKSQLPVYVELFQNEFLSQPYDFFADATVEINSYITGAGINGTITE 652

Query:   563 FPATASKYFRSKCSDDVEKQDFRILPVVPGELLD-VTDLKTRPNIIYHPALTVADIVRPP 621
             FP TA++Y R+ C    E   + + P  PG LL  V+     P    +P  T AD+  PP
Sbjct:   653 FPFTAARYKRNLCLGRKETIPY-MAPAQPGALLTLVSPTAFPPAEAPNPVFTDADVTEPP 711

Query:   622 LPPVTPVSQ-SAPGSSGLVAPAPQGGVPTNVANIGLTLAAIMLFCLL 667
             LPPVT  +  S+PG+    A AP G     ++ + L++ A++L  LL
Sbjct:   712 LPPVTAKAPTSSPGTPSTNAQAPSGQTRITLSLL-LSVFAMVLASLL 757

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006071 "glycerol metabolic process" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0008889 "glycerophosphodiester phosphodiesterase activity" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0009932 "cell tip growth" evidence=RCA;IMP

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0048765 "root hair cell differentiation" evidence=RCA;IMP

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0010026 "trichome differentiation" evidence=IGI

GO:0010442 "guard cell morphogenesis" evidence=IGI

GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=IGI;RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0016051 "carbohydrate biosynthetic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0052546 "cell wall pectin metabolic process" evidence=RCA

TAIR|locus:2173977 SVL1 "SHV3-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
 Identities = 244/584 (41%), Positives = 358/584 (61%)

Query:    98 YDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPN 157
             +D FY+QHN+S + ++    + +I  + Y+SSPE+ F + + R+   N  K VF  LE +
Sbjct:   184 HDAFYAQHNLSMSSFLLSISKTVI--IDYLSSPEVNFFRNIGRRFGRNGPKFVFRFLEKD 241

Query:   158 AVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQ 217
              VE +TNQTYGS+  NLT +K+FASG++VPKSYI P+  +++YL P T+ V DAH AGL+
Sbjct:   242 DVEVSTNQTYGSLAGNLTFLKTFASGVLVPKSYIWPI--ESQYLLPRTSFVQDAHKAGLE 299

Query:   218 VYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID--------- 268
             VYASGF ND   +Y+Y+F+P AEYL+F+DN  F+VDG ++DFP TA+ A+D         
Sbjct:   300 VYASGFGNDFDLAYNYSFDPLAEYLSFMDNGDFSVDGLLSDFPLTASSAVDCFSHLGSNA 359

Query:   269 ----RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGK 324
                   L+I+ NGASG Y GCTDLAY +A+ DGAD+IDC++QMS +G+ FCL S +L G+
Sbjct:   360 SSQVDFLVISKNGASGDYPGCTDLAYTKAIKDGADVIDCSLQMSSDGIPFCLSSINL-GE 418

Query:   325 TT--AATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAK 382
             +T    + F +++T+VPEI    GI+SF L W+EIQ+L+P I +P+ +    + RNP  +
Sbjct:   419 STNVVQSPFRNRSTTVPEIGSLPGIYSFSLAWSEIQTLRPAIENPYSREFT-MFRNPRER 477

Query:   383 NKGKFVTLDGFLEFAK-TKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATF-DKQS 440
             + GKFV+L  FL  AK + +++GVLI++ NA YL  K+GL  V AV   L+ A + +K +
Sbjct:   478 SSGKFVSLSDFLNLAKNSSSLTGVLISVENATYLREKQGLDAVKAVLDTLTEAGYSNKTT 537

Query:   441 TQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYAXXXXXXXXXXXX 500
             T +VMIQS +SSVL  F+    Y+ V  + + +       +E+IKK+A            
Sbjct:   538 TTRVMIQSTNSSVLIDFKKQSRYETVYKVEETIRDILDTAIEDIKKFADAVVISKKSVFP 597

Query:   501 XXESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGIT 560
               ESFTT  T ++  L    + VY+   RNE++S  +D+ AD  +E+ +   G G++G  
Sbjct:   598 TSESFTTGQTKLVERLQKFQLPVYVEVFRNEFVSQPWDFFADATVEINSHVTGAGINGTI 657

Query:   561 TEFPATASKYFRSKCSDDVEKQDFRILPVVPGELLDVTDLKTRPNI-IYHPALTVADIVR 619
             TEFP TA++Y R+ C    +   + I PV P  LL +    + P      P  T AD+  
Sbjct:   658 TEFPLTAARYKRNSCLTRKDVPPYMI-PVQPAGLLTIVSPASLPPAEAPSPVFTDADVTE 716

Query:   620 PPLPPVT---PVSQSAPGSSGLVAPAPQGGVPTNVANIGLTLAA 660
             PPLPPV+   P +   P S+G  +P  Q    T VA + L L+A
Sbjct:   717 PPLPPVSARAPTTTPGPQSTGEKSPNGQ----TRVA-LSLLLSA 755

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006071 "glycerol metabolic process" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0008889 "glycerophosphodiester phosphodiesterase activity" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0010026 "trichome differentiation" evidence=IGI

GO:0010442 "guard cell morphogenesis" evidence=IGI

GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=IGI;RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0007155 "cell adhesion" evidence=RCA

GO:0009653 "anatomical structure morphogenesis" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0042545 "cell wall modification" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048364 "root development" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0048869 "cellular developmental process" evidence=RCA

GO:0052546 "cell wall pectin metabolic process" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2085710 SVL3 "SHV3-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
 Identities = 208/485 (42%), Positives = 297/485 (61%)

Query:    11 IML-CNLQFSKDGLGVCLSDVRLNN---ITTINGAFKDQQTTKNINGNNVRGWFSVDYTL 66
             +ML C+LQ +KDG+G+C  +++L+N   +  I+  +K++              FSVD+T 
Sbjct:    64 VMLWCDLQLTKDGVGICFPNLKLDNGSNVIRIDPHYKER--------------FSVDFTW 109

Query:    67 EQLGQLYLVQNVYTRSEAFDNTQPIPTPDTIYDL-------------FYSQHNISAAKYI 113
             ++L  + L Q V +R   FD+   I   + +  L             FY++HN+S    +
Sbjct:   110 KELSDVKLAQGVVSRPYIFDDVSSILAIEEVAKLTASGLWLNIQDSAFYAKHNLSMRNSV 169

Query:   114 TEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKN 173
                 ++L   V +ISSP I FLK+M   V    TKL+F  L+   +EP TNQ+YGS+ KN
Sbjct:   170 VSLSRRL--KVNFISSPGISFLKSMKNSVKPTVTKLIFRFLKQEHIEPFTNQSYGSLAKN 227

Query:   174 LTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSY 233
             L+ I++F+SGI+VPKSYI PV++   YL+P T+LVTDAH  GLQV+AS FAND   +Y+Y
Sbjct:   228 LSYIRTFSSGILVPKSYIWPVDSAL-YLQPHTSLVTDAHKEGLQVFASEFANDFVIAYNY 286

Query:   234 NFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID--------------RPLIITHNGAS 279
             +++P AEYL+FIDN  F+VDGF++DFP T   AI+              +  II+ NGAS
Sbjct:   287 SYDPTAEYLSFIDNGNFSVDGFLSDFPVTPYRAINCFSHVDPKRAKEQAKITIISKNGAS 346

Query:   280 GVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA-TVFMSKATSV 338
             G + GCTDLAYQ+A  DGADI+DC VQMSK+ + FC+ S DLI  T    T F + ++ V
Sbjct:   347 GDFPGCTDLAYQRAASDGADILDCNVQMSKDKIPFCMSSFDLINSTNVIETSFRNLSSVV 406

Query:   339 PEIQKER-GIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFA 397
              EI   R GI++F LT ++IQ+LKP IS+  +K +  + RNP     GKF+TL  FL   
Sbjct:   407 SEINPRRSGIYTFSLTMSQIQTLKPTISN-LEKDSG-LFRNPRNNKAGKFLTLSEFLFLP 464

Query:   398 -KTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATF--DKQSTQQVMIQSDDSSVL 454
              +  ++ G+LI + NAAYL   +G+ VVDAV   L  AT   +K S + ++IQS D SVL
Sbjct:   465 NRYSSLLGLLIEVENAAYLVEHQGISVVDAVLDELKRATTQQNKTSARTILIQSTDKSVL 524

Query:   455 SKFQD 459
              KF++
Sbjct:   525 MKFKE 529

GO:0005886 "plasma membrane" evidence=ISM

GO:0006071 "glycerol metabolic process" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0008889 "glycerophosphodiester phosphodiesterase activity" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2019642 GDPD5 "glycerophosphodiester phosphodiesterase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
 Identities = 42/120 (35%), Positives = 60/120 (50%)

Query:   145 NTTKLVFMVLEPNAVEPT--TNQTYGSILKN--LTAIKSFASGIVVPKSYIIPVNNKTRY 200
             N T    ++L  +   PT  TNQTY  I  +     IK +  GI   K  I+PVNN   Y
Sbjct:   239 NLTDSPKVLLIDDVTMPTQDTNQTYAEITSDAYFEYIKQYVVGIGPWKDTIVPVNNN--Y 296

Query:   201 LEPATTLVTDAHNAGLQVYASGFANDI-YSSYSYNFEPEAEYLTFIDNSQFAVDGFITDF 259
             +   T LV  AH   LQV+   + N+  +  Y+++ +P  EY  +I+  +  VDG  TDF
Sbjct:   297 VLAPTDLVKRAHAHNLQVHPYTYRNEHEFLHYNFSQDPYKEYDYWIN--EIGVDGLFTDF 354

GO:0005886 "plasma membrane" evidence=ISM

GO:0006071 "glycerol metabolic process" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0008889 "glycerophosphodiester phosphodiesterase activity" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2142823 GDPD6 "glycerophosphodiester phosphodiesterase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 38/113 (33%), Positives = 59/113 (52%)

Query:   150 VFMVLEPNAVEPTTNQTYGSILKN--LTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTL 207
             +F++ +   +   TN+TY  I  +  L  IK +  GI   K  I+PVNN  R + P T L
Sbjct:   246 LFLIDDVTILTEDTNKTYAEITSDAYLDYIKPYVIGIGPWKDTIVPVNNN-RLMTP-TDL 303

Query:   208 VTDAHNAGLQVYASGFANDI-YSSYSYNFEPEAEYLTFIDNSQFAVDGFITDF 259
             V  AH+  LQV+   + N+  +    +N +P  EY  +++  +  VDG  TDF
Sbjct:   304 VARAHSRNLQVHPYTYRNENQFLHLEFNQDPYLEYDYWLN--KIGVDGLFTDF 354

GO:0005886 "plasma membrane" evidence=ISM

GO:0006071 "glycerol metabolic process" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0008889 "glycerophosphodiester phosphodiesterase activity" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_802405.1 annotation not avaliable (754 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	671
cd08604	300	cd08604, GDPD_SHV3_repeat_2, Glycerophosphodiester	1e-150
cd08571	302	cd08571, GDPD_SHV3_plant, Glycerophosphodiester ph	1e-120
cd08603	299	cd08603, GDPD_SHV3_repeat_1, Glycerophosphodiester	1e-107
cd08571	302	cd08571, GDPD_SHV3_plant, Glycerophosphodiester ph	4e-65
cd08602	309	cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester	5e-33
cd08559	296	cd08559, GDPD_periplasmic_GlpQ_like, Periplasmic g	6e-29
cd08602	309	cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester	4e-28
cd08559	296	cd08559, GDPD_periplasmic_GlpQ_like, Periplasmic g	2e-19
pfam03009	238	pfam03009, GDPD, Glycerophosphoryl diester phospho	2e-16
cd08603	299	cd08603, GDPD_SHV3_repeat_1, Glycerophosphodiester	1e-15
cd08604	300	cd08604, GDPD_SHV3_repeat_2, Glycerophosphodiester	2e-12
COG0584	257	COG0584, UgpQ, Glycerophosphoryl diester phosphodi	4e-11
cd08600	318	cd08600, GDPD_EcGlpQ_like, Glycerophosphodiester p	7e-09
cd08582	233	cd08582, GDPD_like_2, Glycerophosphodiester phosph	1e-07
cd08556	189	cd08556, GDPD, Glycerophosphodiester phosphodieste	3e-06
cd08566	240	cd08566, GDPD_AtGDE_like, Glycerophosphodiester ph	6e-06
cd08570	234	cd08570, GDPD_YPL206cp_fungi, Glycerophosphodieste	1e-05
cd08601	256	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester p	7e-05
cd08609	315	cd08609, GDPD_GDE3, Glycerophosphodiester phosphod	3e-04
cd08574	252	cd08574, GDPD_GDE_2_3_6, Glycerophosphodiester pho	3e-04
PRK11143	355	PRK11143, glpQ, glycerophosphodiester phosphodiest	5e-04
cd08575	264	cd08575, GDPD_GDE4_like, Glycerophosphodiester pho	6e-04
cd08580	263	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester	0.001
cd08563	230	cd08563, GDPD_TtGDE_like, Glycerophosphodiester ph	0.001
COG0584	257	COG0584, UgpQ, Glycerophosphoryl diester phosphodi	0.002

>gnl|CDD|176546 cd08604, GDPD_SHV3_repeat_2, Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

 Score =  436 bits (1124), Expect = e-150
 Identities = 173/302 (57%), Positives = 227/302 (75%), Gaps = 3/302 (0%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAAT 329
           PLII+HNGASG Y GCTDLAYQ+AV DGAD+IDC+VQMSK+GV FCL+S +LI  TT AT
Sbjct: 1   PLIISHNGASGDYPGCTDLAYQKAVKDGADVIDCSVQMSKDGVPFCLDSINLINSTTVAT 60

Query: 330 V-FMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV 388
             F ++AT+VPEI    GIF+FDLTW+EIQ+LKP IS+P+  +   + RNP  KN GKF+
Sbjct: 61  SKFSNRATTVPEIGSTSGIFTFDLTWSEIQTLKPAISNPYSVTG--LFRNPANKNAGKFL 118

Query: 389 TLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQS 448
           TL  FL+ AK K++SGVLIN+ NAAYLA KKGL VVDAV  AL+NA +D Q+ Q+V+IQS
Sbjct: 119 TLSDFLDLAKNKSLSGVLINVENAAYLAEKKGLDVVDAVLDALTNAGYDNQTAQKVLIQS 178

Query: 449 DDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTN 508
            DSSVL+ F+   +Y++V  + + +  A    +EEIKK+A AV + R SV   + SF T 
Sbjct: 179 TDSSVLAAFKKQISYERVYVVDETIRDASDSSIEEIKKFADAVVIDRGSVFPVSTSFLTR 238

Query: 509 ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATAS 568
            TN++  L SAN++VY+  LRNE++S+AFD+ ADP +E+ ++ QG GVDG  TEFPATA+
Sbjct: 239 QTNVVEKLQSANLTVYVEVLRNEFVSLAFDFFADPTVEINSYVQGAGVDGFITEFPATAA 298

Query: 569 KY 570
           +Y
Sbjct: 299 RY 300

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserved in SHV3 and SVLs, which suggests that the function of GDPD domains in these proteins might be distinct from those in typical bacterial GP-GDEs. In addition, the two tandem repeats show low sequence similarity to each other, suggesting they have different biochemical function. Most of the members of this family are Arabidopsis-specific gene products. To date, SHV3 orthologues are only found in Physcomitrella patens. This CD includes domain II (the second GDPD domain of SHV3 and SVLs), which is necessary for SHV3 function. Length = 300

>gnl|CDD|176513 cd08571, GDPD_SHV3_plant, Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

 Score =  360 bits (926), Expect = e-120
 Identities = 143/307 (46%), Positives = 194/307 (63%), Gaps = 11/307 (3%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAAT 329
           PL+I   GASG Y   TDLAYQ+A+ DGAD++DC VQ++K+GV  CL S +L   TT A+
Sbjct: 1   PLVIARGGASGDYPDSTDLAYQKAISDGADVLDCDVQLTKDGVPICLPSINLDNSTTIAS 60

Query: 330 VFMS-KATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV 388
           VF   K T V E Q   GIFSFDLTW EIQ+LKP IS+PF      + RNP   N GK +
Sbjct: 61  VFPKRKKTYVVEGQSTSGIFSFDLTWAEIQTLKPIISNPFSV----LFRNPRNDNAGKIL 116

Query: 389 TLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQS 448
           TL+ FL  AK K++SGV IN+ NAA+LA  KGL  VDAV  +LS A +D Q+ ++V I S
Sbjct: 117 TLEDFLTLAKPKSLSGVWINVENAAFLAEHKGLLSVDAVLTSLSKAGYD-QTAKKVYISS 175

Query: 449 DDSSVLSKFQDV---PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVI-STTES 504
            DSSVL  F+         +VL +           + EIKK+AS V V ++ +    ++S
Sbjct: 176 PDSSVLKSFKKRVGTKLVFRVLDVDDTEPDTLLSNLTEIKKFASGVLVPKSYIWPVDSDS 235

Query: 505 FTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGV-GVDGITTEF 563
           F T  T++++D H A + VY+S   NE++S+A+DY ADP +E+ +F      VDG+ T+F
Sbjct: 236 FLTPQTSVVQDAHKAGLEVYVSGFANEFVSLAYDYSADPTLEILSFVGNGNSVDGVITDF 295

Query: 564 PATASKY 570
           PATA++ 
Sbjct: 296 PATAARA 302

This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserved in SHV3 and SVLs, which suggests that the function of GDPD domains in these proteins might be distinct from those in typical bacterial GP-GDEs. In addition, the two tandem repeats show low sequence similarity to each other, suggesting they have different biochemical function. Most members of this family are Arabidopsis-specific gene products. To date, SHV3 orthologues are only found in Physcomitrella patens. Length = 302

>gnl|CDD|176545 cd08603, GDPD_SHV3_repeat_1, Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

 Score =  325 bits (836), Expect = e-107
 Identities = 138/279 (49%), Positives = 195/279 (69%), Gaps = 17/279 (6%)

Query: 2   AKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFS 61
           A S+   +  + C+LQ +KDG+G+CL D+ L+N TTI   +  ++ T ++NG + +GWFS
Sbjct: 24  AASSSSPDVALWCDLQLTKDGVGICLPDLNLDNSTTIARVYPKRKKTYSVNGVSTKGWFS 83

Query: 62  VDYTLEQLGQLYLVQNVYTRSEAFDNTQPIPTPDTI--------------YDLFYSQHNI 107
           VD+TL +L Q+ L+Q +++R+  FD   PI T + +              +D FY QHN+
Sbjct: 84  VDFTLAELQQVTLIQGIFSRTPIFDGQYPISTVEDVVTLAKPEGLWLNVQHDAFYQQHNL 143

Query: 108 SAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTY 167
           S + Y+    + +  +  YISSPE+GFLK++  +V  N TKLVF  L+ + VEP+TNQTY
Sbjct: 144 SMSSYLLSLSKTVKVD--YISSPEVGFLKSIGGRVGRNGTKLVFRFLDKDDVEPSTNQTY 201

Query: 168 GSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDI 227
           GSILKNLT IK+FASGI+VPKSYI PV+   +YL+PAT+LV DAH AGL+VYASGFAND 
Sbjct: 202 GSILKNLTFIKTFASGILVPKSYIWPVD-SDQYLQPATSLVQDAHKAGLEVYASGFANDF 260

Query: 228 YSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA 266
             SY+Y+++P AEYL+F+ N  F+VDG ++DFP TA+EA
Sbjct: 261 DISYNYSYDPVAEYLSFVGNGNFSVDGVLSDFPITASEA 299

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserved in SHV3 and SVLs, which suggests that the function of GDPD domains in these proteins might be distinct from those in typical bacterial GP-GDEs. In addition, the two tandem repeats show low sequence similarity to each other, suggesting they have different biochemical function. Most of the members of this family are Arabidopsis-specific gene products. To date, SHV3 orthologues are only found in Physcomitrella patens. This family includes domain I, the first GDPD domain of SHV3 and SVLs. Length = 299

>gnl|CDD|176513 cd08571, GDPD_SHV3_plant, Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

 Score =  216 bits (553), Expect = 4e-65
 Identities = 103/283 (36%), Positives = 150/283 (53%), Gaps = 38/283 (13%)

Query: 11  IMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLG 70
           ++ C++Q +KDG+ +CL  + L+N TTI   F  ++ T  + G +  G FS D T  ++ 
Sbjct: 31  VLDCDVQLTKDGVPICLPSINLDNSTTIASVFPKRKKTYVVEGQSTSGIFSFDLTWAEIQ 90

Query: 71  QL-YLVQNVYT---RSEAFDNTQPIPTPDTI-----------------YDLFYSQH--NI 107
            L  ++ N ++   R+   DN   I T +                      F ++H   +
Sbjct: 91  TLKPIISNPFSVLFRNPRNDNAGKILTLEDFLTLAKPKSLSGVWINVENAAFLAEHKGLL 150

Query: 108 SAAKYITEYLQKLISNVY---YISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTN 164
           S    +T   +          YISSP+   LK+  ++V    TKLVF VL+ +  EP T 
Sbjct: 151 SVDAVLTSLSKAGYDQTAKKVYISSPDSSVLKSFKKRVG---TKLVFRVLDVDDTEPDT- 206

Query: 165 QTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFA 224
                +L NLT IK FASG++VPKSYI PV +   +L P T++V DAH AGL+VY SGFA
Sbjct: 207 -----LLSNLTEIKKFASGVLVPKSYIWPV-DSDSFLTPQTSVVQDAHKAGLEVYVSGFA 260

Query: 225 NDIYS-SYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA 266
           N+  S +Y Y+ +P  E L+F+ N   +VDG ITDFP TA  A
Sbjct: 261 NEFVSLAYDYSADPTLEILSFVGNG-NSVDGVITDFPATAARA 302

This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserved in SHV3 and SVLs, which suggests that the function of GDPD domains in these proteins might be distinct from those in typical bacterial GP-GDEs. In addition, the two tandem repeats show low sequence similarity to each other, suggesting they have different biochemical function. Most members of this family are Arabidopsis-specific gene products. To date, SHV3 orthologues are only found in Physcomitrella patens. Length = 302

>gnl|CDD|176544 cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins

 Score =  128 bits (325), Expect = 5e-33
 Identities = 86/285 (30%), Positives = 127/285 (44%), Gaps = 47/285 (16%)

Query: 14  CNLQFSKDGLGVCLSDVRLNNITTINGA----FKDQQTTKNINGNNVRGWFSVDYTLEQL 69
            +L  +KDG+ +C  +  L+   T + A    F D++TTK ++G NV GWF+ D+TL +L
Sbjct: 34  PDLVSTKDGVLICRHEPELS--GTTDVADHPEFADRKTTKTVDGVNVTGWFTEDFTLAEL 91

Query: 70  GQLYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQ-------------------HNISAA 110
             L   Q +  R +++D   PIPT + I  L  +                     N    
Sbjct: 92  KTLRARQRLPYRDQSYDGQFPIPTFEEIIALAKAASAATGRTVGIYPEIKHPTYFNAPLG 151

Query: 111 KYITE-YLQKLISNVY-------YISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPT 162
             + +  L+ L    Y       +I S E+  LK +  K D     LV ++ +       
Sbjct: 152 LPMEDKLLETLKKYGYTGKKAPVFIQSFEVTNLKYLRNKTD---LPLVQLIDDATIPPQD 208

Query: 163 T----NQTYGSIL--KNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGL 216
           T    ++TY  +     L  I ++A GI   K  IIP +   R   P T LV DAH AGL
Sbjct: 209 TPEGDSRTYADLTTDAGLKEIATYADGIGPWKDLIIPSDANGRLGTP-TDLVEDAHAAGL 267

Query: 217 QVYASGFAN-DIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP 260
           QV+   F N + +    +  +P AEY  F+D     VDG  TDFP
Sbjct: 268 QVHPYTFRNENTFLPPDFFGDPYAEYRAFLD---AGVDGLFTDFP 309

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively. Length = 309

>gnl|CDD|176502 cd08559, GDPD_periplasmic_GlpQ_like, Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins

 Score =  116 bits (294), Expect = 6e-29
 Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 33/312 (10%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAAT 329
           PL+I H GASG     T  AY  A++ GAD I+  + M+K+GV      P L   T  A 
Sbjct: 1   PLVIAHRGASGYAPEHTLAAYALAIEMGADYIEQDLVMTKDGVLVARHDPTLDRTTNVAE 60

Query: 330 VFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVT 389
            F  +       +K+ G F  D T  E+++L+    S F++  P   R P      K  T
Sbjct: 61  HFPFRG------RKDTGYFVIDFTLAELKTLR--AGSWFNQRYPE--RAPSYYGGFKIPT 110

Query: 390 LDGFLEFAKTKAVS-----GVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQV 444
           L+  +E A+    S     G+     +  +   ++G  + + + + L    +  ++   V
Sbjct: 111 LEEVIELAQGLNKSTGRNVGIYPETKHPTFHK-QEGPDIEEKLLEVLKKYGYTGKN-DPV 168

Query: 445 MIQSDDSSVL----SKFQDVP-----AYKKVLHIRKEVSAAPR---EVVEEIKKYASAVT 492
            IQS +   L    ++  D+P      Y       K+ + A       ++EI KYA  + 
Sbjct: 169 FIQSFEPESLKRLRNETPDIPLVQLIDYGDWAETDKKYTYAWLTTDAGLKEIAKYADGIG 228

Query: 493 VTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQ 552
             ++ +I    +     T++++D H A + V+    RNE L +A D+  D          
Sbjct: 229 PWKSLIIPEDSNGLLVPTDLVKDAHKAGLLVHPYTFRNENLFLAPDFKQDMDALYNA--- 285

Query: 553 GVGVDGITTEFP 564
             GVDG+ T+FP
Sbjct: 286 -AGVDGVFTDFP 296

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI), and glycerophosphoserine (GPS), to the corresponding alcohols and G3P, which is subsequently transported into the cell through the GlpT transport system. Ca2+ is required for GlpQ enzymatic activity. This subfamily also includes some GP-GDEs in higher plants and their eukaryotic homologs, which show very high sequence similarities with bacterial periplasmic GP-GDEs. Length = 296

>gnl|CDD|176544 cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins

 Score =  114 bits (288), Expect = 4e-28
 Identities = 80/322 (24%), Positives = 127/322 (39%), Gaps = 40/322 (12%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAAT 329
           PL+I H GASG     T  AYQ A++ GAD I+  +  +K+GV  C   P+L G T  A 
Sbjct: 1   PLVIAHRGASGYRPEHTLAAYQLAIEQGADFIEPDLVSTKDGVLICRHEPELSGTTDVAD 60

Query: 330 ---VFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGK 386
                  K T   +     G F+ D T  E+++L+ +   P+        R+     +  
Sbjct: 61  HPEFADRKTTKTVDGVNVTGWFTEDFTLAELKTLRARQRLPY--------RDQSYDGQFP 112

Query: 387 FVTLDGFLEFAKTKAVS-----GVLININNAAYLASKKGLGVVDAVTKALSNATFDKQST 441
             T +  +  AK  + +     G+   I +  Y  +  GL + D + + L    +     
Sbjct: 113 IPTFEEIIALAKAASAATGRTVGIYPEIKHPTYFNAPLGLPMEDKLLETLKKYGYTG-KK 171

Query: 442 QQVMIQSDDSSVL---SKFQDVPAYKKVLHIRKEVSAAPREVV---------------EE 483
             V IQS + + L       D+P    V  I                           +E
Sbjct: 172 APVFIQSFEVTNLKYLRNKTDLP---LVQLIDDATIPPQDTPEGDSRTYADLTTDAGLKE 228

Query: 484 IKKYASAVTVTRTSVIST-TESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLAD 542
           I  YA  +   +  +I +         T+++ D H+A + V+    RNE   +  D+  D
Sbjct: 229 IATYADGIGPWKDLIIPSDANGRLGTPTDLVEDAHAAGLQVHPYTFRNENTFLPPDFFGD 288

Query: 543 PLIEVATFAQGVGVDGITTEFP 564
           P  E   F    GVDG+ T+FP
Sbjct: 289 PYAEYRAFLD-AGVDGLFTDFP 309

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively. Length = 309

>gnl|CDD|176502 cd08559, GDPD_periplasmic_GlpQ_like, Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins

 Score = 88.9 bits (221), Expect = 2e-19
 Identities = 70/280 (25%), Positives = 106/280 (37%), Gaps = 50/280 (17%)

Query: 14  CNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQL- 72
            +L  +KDG+ V   D  L+  T  N A           G    G+F +D+TL +L  L 
Sbjct: 34  QDLVMTKDGVLVARHDPTLDRTT--NVAEHFPFR-----GRKDTGYFVIDFTLAELKTLR 86

Query: 73  ---YLVQNVYTRSEAFDNTQPIPTPDTIYDLF--YSQHNISAAKYITE------------ 115
              +  Q    R+ ++     IPT + + +L    ++          E            
Sbjct: 87  AGSWFNQRYPERAPSYYGGFKIPTLEEVIELAQGLNKSTGRNVGIYPETKHPTFHKQEGP 146

Query: 116 -----YLQKLISNVY-------YISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTT 163
                 L+ L    Y       +I S E   LK +  +       LV ++   +  E   
Sbjct: 147 DIEEKLLEVLKKYGYTGKNDPVFIQSFEPESLKRLRNETPDI--PLVQLIDYGDWAETDK 204

Query: 164 NQTYGSIL--KNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYAS 221
             TY  +     L  I  +A GI   KS IIP ++    L   T LV DAH AGL V+  
Sbjct: 205 KYTYAWLTTDAGLKEIAKYADGIGPWKSLIIPEDSN--GLLVPTDLVKDAHKAGLLVHPY 262

Query: 222 GFAND-IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP 260
            F N+ ++ +  +  + +A Y          VDG  TDFP
Sbjct: 263 TFRNENLFLAPDFKQDMDALYNA------AGVDGVFTDFP 296

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI), and glycerophosphoserine (GPS), to the corresponding alcohols and G3P, which is subsequently transported into the cell through the GlpT transport system. Ca2+ is required for GlpQ enzymatic activity. This subfamily also includes some GP-GDEs in higher plants and their eukaryotic homologs, which show very high sequence similarities with bacterial periplasmic GP-GDEs. Length = 296

>gnl|CDD|217317 pfam03009, GDPD, Glycerophosphoryl diester phosphodiesterase family

 Score = 79.0 bits (195), Expect = 2e-16
 Identities = 61/294 (20%), Positives = 107/294 (36%), Gaps = 58/294 (19%)

Query: 275 HNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSK 334
           H GASG Y   T LA+++A + GAD I+  VQ++K+GV   +    L  +TT     +  
Sbjct: 1   HRGASGDYPENTLLAFRKAAEAGADYIEFDVQLTKDGVPVVMHDFTL-DRTTDGAGRVK- 58

Query: 335 ATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFL 394
                           DLT  E++ L     +            P         TL+  L
Sbjct: 59  ----------------DLTLEELKKLD--AGAGNSPPFSGERVPP---------TLEEVL 91

Query: 395 EFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVL 454
           E         + I     A   + + LG+V  +  ++      K   ++V+  S +   L
Sbjct: 92  ERWDVGLNIEIKIKQTPEA--IAVEELGIVKDLLASVD--EILKVDPRRVIFSSFNPDAL 147

Query: 455 SKFQDV-PAYKKV-LHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNI 512
            + +++ P    V L   +  +  P E     +  A+A        +S  +     A   
Sbjct: 148 QRLRELAPTLPLVFLTSGRAPALDPLE-----RAAAAAGAPALLGGVSLVD----EALVD 198

Query: 513 LRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPAT 566
           ++  H+  + V++  + NE                      +GVDG+ T+ P T
Sbjct: 199 VKRAHARGLKVHVWTVNNED--------------DMKRLLKLGVDGVITDRPDT 238

E. coli has two sequence related isozymes of glycerophosphoryl diester phosphodiesterase (GDPD) - periplasmic and cytosolic. This family also includes agrocinopine synthase, the similarity to GDPD has been noted. This family appears to have weak but not significant matches to mammalian phospholipase C pfam00388, which suggests that this family may adopt a TIM barrel fold. Length = 238

>gnl|CDD|176545 cd08603, GDPD_SHV3_repeat_1, Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

 Score = 77.8 bits (192), Expect = 1e-15
 Identities = 72/325 (22%), Positives = 127/325 (39%), Gaps = 54/325 (16%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGAD--IIDCTVQMSKEGVAFCLESPDLIGKTTA 327
           PL+I   G SG++   +  AYQ A    +    + C +Q++K+GV  CL   +L   TT 
Sbjct: 1   PLVIARGGFSGLFPDSSLFAYQFAASSSSPDVALWCDLQLTKDGVGICLPDLNLDNSTTI 60

Query: 328 ATVFMSKATS-VPEIQKERGIFSFDLTWTEIQSLK---PQISSP--FDKSNPPIIRNPEA 381
           A V+  +  +        +G FS D T  E+Q +       S    FD   P  I   E 
Sbjct: 61  ARVYPKRKKTYSVNGVSTKGWFSVDFTLAELQQVTLIQGIFSRTPIFDGQYP--ISTVE- 117

Query: 382 KNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQST 441
                        +        G+ +N+ + A+                LS +++    +
Sbjct: 118 -------------DVVTLAKPEGLWLNVQHDAFYQQHN-----------LSMSSYLLSLS 153

Query: 442 QQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEE---------------IKK 486
           + V +    S  +   + +         +       ++ VE                IK 
Sbjct: 154 KTVKVDYISSPEVGFLKSIGGRVGRNGTKLVFRFLDKDDVEPSTNQTYGSILKNLTFIKT 213

Query: 487 YASAVTVTRTSVISTTES-FTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLI 545
           +AS + V ++ +       +   AT++++D H A + VY S   N+   I+++Y  DP+ 
Sbjct: 214 FASGILVPKSYIWPVDSDQYLQPATSLVQDAHKAGLEVYASGFAND-FDISYNYSYDPVA 272

Query: 546 EVATFAQ--GVGVDGITTEFPATAS 568
           E  +F       VDG+ ++FP TAS
Sbjct: 273 EYLSFVGNGNFSVDGVLSDFPITAS 297

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserved in SHV3 and SVLs, which suggests that the function of GDPD domains in these proteins might be distinct from those in typical bacterial GP-GDEs. In addition, the two tandem repeats show low sequence similarity to each other, suggesting they have different biochemical function. Most of the members of this family are Arabidopsis-specific gene products. To date, SHV3 orthologues are only found in Physcomitrella patens. This family includes domain I, the first GDPD domain of SHV3 and SVLs. Length = 299

>gnl|CDD|176546 cd08604, GDPD_SHV3_repeat_2, Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 71/289 (24%), Positives = 122/289 (42%), Gaps = 60/289 (20%)

Query: 14  CNLQFSKDGLGVCLSDVRLNNITTI-NGAFKDQQTT-KNINGNNVRGWFSVDYTLEQLGQ 71
           C++Q SKDG+  CL  + L N TT+    F ++ TT   I   +  G F+ D T  ++  
Sbjct: 34  CSVQMSKDGVPFCLDSINLINSTTVATSKFSNRATTVPEIG--STSGIFTFDLTWSEIQT 91

Query: 72  LYLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNISAAKYIT--EYLQ---------KL 120
           L                  I  P ++  LF +  N +A K++T  ++L           L
Sbjct: 92  L---------------KPAISNPYSVTGLFRNPANKNAGKFLTLSDFLDLAKNKSLSGVL 136

Query: 121 IS--NVYYISSPEIGF------LKTMDRK-VDHNTTKLVFMVLEPNAVEP---------- 161
           I+  N  Y++  + G       L  +     D+ T + V +    ++V            
Sbjct: 137 INVENAAYLAE-KKGLDVVDAVLDALTNAGYDNQTAQKVLIQSTDSSVLAAFKKQISYER 195

Query: 162 --TTNQTYGSILKN-LTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQV 218
               ++T      + +  IK FA  +V+ +  + PV+  T +L   T +V    +A L V
Sbjct: 196 VYVVDETIRDASDSSIEEIKKFADAVVIDRGSVFPVS--TSFLTRQTNVVEKLQSANLTV 253

Query: 219 YASGFANDIYSSYSYNF--EPEAEYLTFIDNSQFAVDGFITDFPTTATE 265
           Y     N+ + S +++F  +P  E  +++      VDGFIT+FP TA  
Sbjct: 254 YVEVLRNE-FVSLAFDFFADPTVEINSYV--QGAGVDGFITEFPATAAR 299

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserved in SHV3 and SVLs, which suggests that the function of GDPD domains in these proteins might be distinct from those in typical bacterial GP-GDEs. In addition, the two tandem repeats show low sequence similarity to each other, suggesting they have different biochemical function. Most of the members of this family are Arabidopsis-specific gene products. To date, SHV3 orthologues are only found in Physcomitrella patens. This CD includes domain II (the second GDPD domain of SHV3 and SVLs), which is necessary for SHV3 function. Length = 300

>gnl|CDD|223657 COG0584, UgpQ, Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]

 Score = 63.7 bits (155), Expect = 4e-11
 Identities = 65/305 (21%), Positives = 109/305 (35%), Gaps = 61/305 (20%)

Query: 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA 328
            PLII H GASG     T  A++ A + GAD I+  VQ++K+GV   +   + + +TT  
Sbjct: 5   MPLIIAHRGASGYAPENTLAAFELAAEQGADYIELDVQLTKDGVLVVIH-DETLDRTTN- 62

Query: 329 TVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV 388
                            G    DLT  E++ L            P            +  
Sbjct: 63  ---------------GLGTVR-DLTLAELKRLDAGS-----FRIPTF--------GEEIP 93

Query: 389 TLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQS 448
           TL+  LE    K   G+ I I +  +    +   ++ A+   L        +  +V++ S
Sbjct: 94  TLEELLEATGRKI--GLYIEIKSPGFH--PQEGKILAALLALLK-RYGGTAADDRVILSS 148

Query: 449 DDSSVLSKFQ-DVPAYKKVLHIRKEVSAAPRE---VVEEIKKYASAVTVTRTSVISTTES 504
            D + L + +   P     L +         E    ++E+  YA  V      +      
Sbjct: 149 FDHAALKRIKRLAPDLPLGLLLDATDQYDWMELPRALKEVALYADGVGPDWAMLAELL-- 206

Query: 505 FTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP 564
                T ++ D H+A + V++  +  E              +        GVDG+ T+FP
Sbjct: 207 -----TELVDDAHAAGLKVHVWTVNEE--------------DDIRLLLEAGVDGLITDFP 247

Query: 565 ATASK 569
             A  
Sbjct: 248 DLAVA 252

Length = 257

>gnl|CDD|176542 cd08600, GDPD_EcGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins

 Score = 57.4 bits (139), Expect = 7e-09
 Identities = 73/335 (21%), Positives = 127/335 (37%), Gaps = 56/335 (16%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAAT 329
            +II H GASG     T  A   A   GAD ++  V ++K+     +    L   T  A 
Sbjct: 1   KIIIAHRGASGYLPEHTLEAKALAYAQGADYLEQDVVLTKDDKLVVIHDHYLDNVTNVAE 60

Query: 330 VFMSKATSVPEIQKERGIF-SFDLTWTEIQSLKPQISSPFD---KSNPPIIRN--PEAKN 383
            F       P+ +++ G +   D T  E++SL   ++  FD        +  N  P  K+
Sbjct: 61  KF-------PDRKRKDGRYYVIDFTLDELKSL--SVTERFDIENGKKVQVYPNRFPLWKS 111

Query: 384 KGKFVTLDGFLEF-----AKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDK 438
             K  TL+  +E        T    G+   I  A +   ++G  +  A  + L    +  
Sbjct: 112 DFKIHTLEEEIELIQGLNKSTGKNVGIYPEI-KAPWFHHQEGKDIAAATLEVLKKYGYTS 170

Query: 439 QSTQQVMIQSDDSSVL-----------------------SKFQDVPAYKKVLHIRKEVSA 475
           ++  +V +Q+ D + L                       + + +         +  +   
Sbjct: 171 KND-KVYLQTFDPNELKRIKNELLPKMGMDLKLVQLIAYTDWGETQEKDPGGWVNYDYDW 229

Query: 476 A-PREVVEEIKKYASAVTVTRTSVISTTESFTTNA-TNILRDLHSANISVYISALRNEYL 533
              +  ++EI KYA  V    + +I    S      T++++D H A + V+   +R + L
Sbjct: 230 MFTKGGLKEIAKYADGVGPWYSMIIEEKSSKGNIVLTDLVKDAHEAGLEVHPYTVRKDAL 289

Query: 534 SI---AFDYLADPLIEVATFAQGVGVDGITTEFPA 565
                  D L D L+  A      GVDG+ T+FP 
Sbjct: 290 PEYAKDADQLLDALLNKA------GVDGVFTDFPD 318

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI), and glycerophosphoserine (GPS), to the corresponding alcohols and G3P, which is subsequently transported into the cell through the GlpT transport system. Ca2+ is required for the enzymatic activity of GlpQ. This family also includes a surface-exposed lipoprotein, protein D (HPD), from Haemophilus influenza Type b and nontypeable strains, which shows very high sequence similarity with E. coli GlpQ. HPD has been characterized as a human immunoglobulin D-binding protein with glycerophosphodiester phosphodiesterase activity. It can hydrolyze phosphatidylcholine from host membranes to produce free choline on the lipopolysaccharides on the surface of pathogenic bacteria. Length = 318

>gnl|CDD|176524 cd08582, GDPD_like_2, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 61/298 (20%), Positives = 103/298 (34%), Gaps = 68/298 (22%)

Query: 272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVF 331
           +I H GAS      T  A++ A + GAD I+  V+++K+G   C+  P L   +      
Sbjct: 1   VIAHRGASAEAPENTLAAFELAWEQGADGIETDVRLTKDGELVCVHDPTLKRTS------ 54

Query: 332 MSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV-TL 390
                         G  S DLT  E++ L              I        KG+ V TL
Sbjct: 55  -----------GGDGAVS-DLTLAELRKLD-------------IGSWKGESYKGEKVPTL 89

Query: 391 DGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDD 450
           + +L     K    + I I +        G    + + K L  +       +Q++I S D
Sbjct: 90  EEYLAIVP-KYGKKLFIEIKHPRR-----GPEAEEELLKLLKES---GLLPEQIVIISFD 140

Query: 451 SSVLSKFQDVPAYKKVLHIRKEVSAA--PREVVEEIKKYASAVTVTRTSVISTTESFTTN 508
           +  L + +++    + L +R   S    PR + +                +  +     N
Sbjct: 141 AEALKRVRELAPTLETLWLRNYKSPKEDPRPLAKSGGAAG----------LDLSYEKKLN 190

Query: 509 ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPAT 566
              I + L  A + + +  + +               E A     +GVD ITT  P  
Sbjct: 191 PAFI-KALRDAGLKLNVWTVDDA--------------EDAKRLIELGVDSITTNRPGR 233

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Length = 233

>gnl|CDD|176499 cd08556, GDPD, Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCL 316
           II H GASG     T  A+++A++ GAD ++  VQ++K+GV   +
Sbjct: 1   IIAHRGASGEAPENTLAAFRKALEAGADGVELDVQLTKDGVLVVI 45

The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols are major sources of carbon and phosphate. Its catalytic mechanism is based on the metal ion-dependent acid-base reaction, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). Both, GDPD related proteins and PI-PLCs, belong to the superfamily of PI-PLC-like phosphodiesterases. Length = 189

>gnl|CDD|176509 cd08566, GDPD_AtGDE_like, Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins

 Score = 47.7 bits (114), Expect = 6e-06
 Identities = 63/298 (21%), Positives = 117/298 (39%), Gaps = 62/298 (20%)

Query: 271 LIITHNGASGV-YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAAT 329
           L++ H G  G      +  A + A+D GADI++  V+ +K+GV   +    L  +TT   
Sbjct: 1   LVVAHRGGWGAGAPENSLAAIEAAIDLGADIVEIDVRRTKDGVLVLMHDDTL-DRTTNGK 59

Query: 330 VFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKG-KFV 388
                           G  S DLT  EI+ L+              +++ + +    K  
Sbjct: 60  ----------------GKVS-DLTLAEIRKLR--------------LKDGDGEVTDEKVP 88

Query: 389 TLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQS 448
           TL+  L +AK K    +L+N++       +    V+  V K          +  QV+ +S
Sbjct: 89  TLEEALAWAKGK----ILLNLDLKDADLDE----VIALVKKH--------GALDQVIFKS 132

Query: 449 DDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTN 508
                  + + +    +V+ +         E ++E +    A  +   ++++   +F   
Sbjct: 133 YSEEQAKELRAL--APEVMLM---PIVRDAEDLDEEE----ARAIDALNLLAFEITFDDL 183

Query: 509 ATNILRD--LHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP 564
               L D  L +  I V+++ L ++  +     L+DP  EV       GVD I T+ P
Sbjct: 184 DLPPLFDELLRALGIRVWVNTLGDDDTAGLDRALSDPR-EVWGELVDAGVDVIQTDRP 240

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function. Length = 240

>gnl|CDD|176512 cd08570, GDPD_YPL206cp_fungi, Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 17/41 (41%), Positives = 26/41 (63%)

Query: 272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGV 312
           +I H G    Y   T LA+++AV+ GAD I+  V ++K+GV
Sbjct: 1   VIGHRGYKAKYPENTLLAFEKAVEAGADAIETDVHLTKDGV 41

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholipase C-type degradation mechanism. YPL206cp has been characterized as a PG-specific phospholipase C that selectively catalyzes the cleavage of PG, not glycerophosphoinositol (GPI) or glycerophosphocholine (GPC), to diacylglycerol (DAG) and glycerophosphate. Members in this family are distantly related to S. cerevisiae YPL110cp, which selectively hydrolyzes glycerophosphocholine (GPC), not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate, and has been characterized as a cytoplasmic GPC-specific phosphodiesterase. Length = 234

>gnl|CDD|176543 cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins

 Score = 44.6 bits (106), Expect = 7e-05
 Identities = 60/232 (25%), Positives = 87/232 (37%), Gaps = 43/232 (18%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAAT 329
             +I H GASG     T  AY  A + GAD I+  +QM+K+GV   +   D     T   
Sbjct: 1   NAVIAHRGASGYAPEHTFAAYDLAREMGADYIELDLQMTKDGVLVAMH--DETLDRTTNI 58

Query: 330 VFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVT 389
                                D T  EI+ L     S F+K+ P   R  E+ +  K  T
Sbjct: 59  ERPGPVK--------------DYTLAEIKQL--DAGSWFNKAYPEYAR--ESYSGLKVPT 100

Query: 390 LDGFLEFAKTKAVSGVLININNAAY--------LASKKGLGVVDAVTKALSNATFDKQST 441
           L+  +E    +A     I   +           LA+    G+   +T  L N        
Sbjct: 101 LEEVIERYGGRA--NYYIETKSPDLYPGMEEKLLATLDKYGL---LTDNLKNG------- 148

Query: 442 QQVMIQSDDSSVLSKF-QDVPAYKKVLHI-RKEVSAAPREVVEEIKKYASAV 491
            QV+IQS     L K  Q  P    V  +   E +    + ++EIK+YA  +
Sbjct: 149 -QVIIQSFSKESLKKLHQLNPNIPLVQLLWYGEGAETYDKWLDEIKEYAIGI 199

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Length = 256

>gnl|CDD|176551 cd08609, GDPD_GDE3, Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 12/105 (11%)

Query: 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA 328
           +P ++ H GA  +    T ++ +++++ G  + +  V +SK+GV F +    L+  T   
Sbjct: 26  KPALVGHRGAPMLAPENTLMSLRKSLECGVVVFETDVMVSKDGVPFLMHDEGLLRTTNVK 85

Query: 329 TVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNP 373
            VF  +              S + TWTE+++L     S F +  P
Sbjct: 86  DVFPGRDA----------AGSNNFTWTELKTLNA--GSWFLERRP 118

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalian GDE3 functions as an inducer of osteoblast differentiation. It also plays a critical role for actin cytoskeletal modulation. The catalytic activity of GDPD domain is essential for mammalian GDE3 cellular function. Length = 315

>gnl|CDD|176516 cd08574, GDPD_GDE_2_3_6, Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA 328
           +P +I H GA  +    T +++++A++ G   ++  V +S +GV F +    L   T  A
Sbjct: 1   KPALIGHRGAPMLAPENTLMSFEKALEHGVYGLETDVTISYDGVPFLMHDRTLRRTTNVA 60

Query: 329 TVFMSKATSVPEIQKERGIFSFDLTWTEIQSL 360
            VF       PE   ER   +   TWT++Q L
Sbjct: 61  DVF-------PERAHER---ASMFTWTDLQQL 82

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bone tissues and spleen. It selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol and functions as an inducer of osteoblast differentiation. Mammalian GDE6 is predominantly expressed in the spermatocytes of testis, and its specific physiological function has not been elucidated yet. Length = 252

>gnl|CDD|236859 PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional

 Score = 42.4 bits (100), Expect = 5e-04
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 16/97 (16%)

Query: 270 PLIITHNGASGVYAGCT----DLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKT 325
            ++I H GASG     T     +AY Q    GAD ++  + M+K+     L    L   T
Sbjct: 27  KIVIAHRGASGYLPEHTLPAKAMAYAQ----GADYLEQDLVMTKDDQLVVLHDHYLDRVT 82

Query: 326 TAATVFMSKATSVPEIQKERGIF-SFDLTWTEIQSLK 361
             A  F       P+  ++ G + + D T  EI+SLK
Sbjct: 83  DVAERF-------PDRARKDGRYYAIDFTLDEIKSLK 112

Length = 355

>gnl|CDD|176517 cd08575, GDPD_GDE4_like, Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins

 Score = 41.8 bits (99), Expect = 6e-04
 Identities = 16/43 (37%), Positives = 27/43 (62%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGV 312
           PL I H G +  +   T  A++ AV +GAD+++  VQ++K+G 
Sbjct: 1   PLHIAHRGGAAEFPENTIAAFRHAVKNGADMLELDVQLTKDGQ 43

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4. Length = 264

>gnl|CDD|176522 cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins

 Score = 41.2 bits (97), Expect = 0.001
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGV 312
           PLI+ H G +      T LA  +A+ +GAD I  TVQ+SK+GV
Sbjct: 1   PLIVAHRGGTADAPENTLLAISKALANGADAIWLTVQLSKDGV 43

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated. Length = 263

>gnl|CDD|176506 cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins

 Score = 40.6 bits (96), Expect = 0.001
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGV 312
            LI  H G SG     T LA+++A++ GAD I+  V ++K+G 
Sbjct: 1   TLIFAHRGYSGTAPENTLLAFKKAIEAGADGIELDVHLTKDGQ 43

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE. Length = 230

>gnl|CDD|223657 COG0584, UgpQ, Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 44/262 (16%), Positives = 84/262 (32%), Gaps = 48/262 (18%)

Query: 14  CNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLY 73
            ++Q +KDG+ V + D    + TT         T   +   +   +              
Sbjct: 39  LDVQLTKDGVLVVIHD-ETLDRTTNGLGTVRDLTLAELKRLDAGSFRI-------PTFGE 90

Query: 74  LVQNVYTRSEAFDNTQP-----IPTPDTIYDLFYSQHNISAAKYITEYLQKLISNVYYIS 128
            +    T  E  + T       I      +     +   +    +  Y      +   +S
Sbjct: 91  EIP---TLEELLEATGRKIGLYIEIKSPGFHPQEGKILAALLALLKRYGGTAADDRVILS 147

Query: 129 SPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPK 188
           S +   LK + R        L+        ++ T    +  + + L  +  +A G+    
Sbjct: 148 SFDHAALKRIKRLAPDLPLGLL--------LDATDQYDWMELPRALKEVALYADGVGPDW 199

Query: 189 SYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNS 248
           + +  +          T LV DAH AGL+V+             +    E +    +   
Sbjct: 200 AMLAEL---------LTELVDDAHAAGLKVHV------------WTVNEEDDIRLLL--- 235

Query: 249 QFAVDGFITDFPTTATEAIDRP 270
           +  VDG ITDFP  A   +++ 
Sbjct: 236 EAGVDGLITDFPDLAVAFLNKR 257

Length = 257

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	671
cd08603	299	GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodi	100.0
cd08571	302	GDPD_SHV3_plant Glycerophosphodiester phosphodiest	100.0
cd08604	300	GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodi	100.0
cd08603	299	GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodi	100.0
cd08602	309	GDPD_ScGlpQ1_like Glycerophosphodiester phosphodie	100.0
cd08600	318	GDPD_EcGlpQ_like Glycerophosphodiester phosphodies	100.0
cd08559	296	GDPD_periplasmic_GlpQ_like Periplasmic glycerophos	100.0
PRK11143	355	glpQ glycerophosphodiester phosphodiesterase; Prov	100.0
cd08560	356	GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodi	100.0
cd08601	256	GDPD_SaGlpQ_like Glycerophosphodiester phosphodies	100.0
cd08580	263	GDPD_Rv2277c_like Glycerophosphodiester phosphodie	100.0
cd08581	229	GDPD_like_1 Glycerophosphodiester phosphodiesteras	100.0
PRK09454	249	ugpQ cytoplasmic glycerophosphodiester phosphodies	100.0
cd08612	300	GDPD_GDE4 Glycerophosphodiester phosphodiesterase	100.0
cd08562	229	GDPD_EcUgpQ_like Glycerophosphodiester phosphodies	100.0
cd08568	226	GDPD_TmGDE_like Glycerophosphodiester phosphodiest	100.0
cd08563	230	GDPD_TtGDE_like Glycerophosphodiester phosphodiest	100.0
cd08574	252	GDPD_GDE_2_3_6 Glycerophosphodiester phosphodieste	100.0
cd08564	265	GDPD_GsGDE_like Glycerophosphodiester phosphodiest	100.0
cd08565	235	GDPD_pAtGDE_like Glycerophosphodiester phosphodies	100.0
cd08610	316	GDPD_GDE6 Glycerophosphodiester phosphodiesterase	100.0
cd08579	220	GDPD_memb_like Glycerophosphodiester phosphodieste	100.0
cd08608	351	GDPD_GDE2 Glycerophosphodiester phosphodiesterase	100.0
cd08582	233	GDPD_like_2 Glycerophosphodiester phosphodiesteras	100.0
cd08573	258	GDPD_GDE1 Glycerophosphodiester phosphodiesterase	100.0
cd08609	315	GDPD_GDE3 Glycerophosphodiester phosphodiesterase	100.0
cd08575	264	GDPD_GDE4_like Glycerophosphodiester phosphodieste	100.0
cd08606	286	GDPD_YPL110cp_fungi Glycerophosphodiester phosphod	100.0
cd08572	293	GDPD_GDE5_like Glycerophosphodiester phosphodieste	100.0
cd08567	263	GDPD_SpGDE_like Glycerophosphodiester phosphodiest	100.0
cd08605	282	GDPD_GDE5_like_1_plant Glycerophosphodiester phosp	100.0
cd08607	290	GDPD_GDE5 Glycerophosphodiester phosphodiesterase	100.0
cd08570	234	GDPD_YPL206cp_fungi Glycerophosphodiester phosphod	100.0
cd08561	249	GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodieste	100.0
cd08566	240	GDPD_AtGDE_like Glycerophosphodiester phosphodiest	100.0
cd08585	237	GDPD_like_3 Glycerophosphodiester phosphodiesteras	100.0
cd08583	237	PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetic	100.0
COG0584	257	UgpQ Glycerophosphoryl diester phosphodiesterase [	100.0
cd08613	309	GDPD_GDE4_like_1 Glycerophosphodiester phosphodies	100.0
PF03009	256	GDPD: Glycerophosphoryl diester phosphodiesterase	100.0
cd08571	302	GDPD_SHV3_plant Glycerophosphodiester phosphodiest	100.0
cd08602	309	GDPD_ScGlpQ1_like Glycerophosphodiester phosphodie	100.0
cd08604	300	GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodi	100.0
cd08556	189	GDPD Glycerophosphodiester phosphodiesterase domai	100.0
KOG2258	341	consensus Glycerophosphoryl diester phosphodiester	100.0
cd08560	356	GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodi	100.0
cd08600	318	GDPD_EcGlpQ_like Glycerophosphodiester phosphodies	100.0
PRK11143	355	glpQ glycerophosphodiester phosphodiesterase; Prov	99.98
cd08555	179	PI-PLCc_GDPD_SF Catalytic domain of phosphoinositi	99.97
cd08559	296	GDPD_periplasmic_GlpQ_like Periplasmic glycerophos	99.97
cd08580	263	GDPD_Rv2277c_like Glycerophosphodiester phosphodie	99.96
cd08581	229	GDPD_like_1 Glycerophosphodiester phosphodiesteras	99.95
cd08610	316	GDPD_GDE6 Glycerophosphodiester phosphodiesterase	99.95
cd08562	229	GDPD_EcUgpQ_like Glycerophosphodiester phosphodies	99.95
cd08574	252	GDPD_GDE_2_3_6 Glycerophosphodiester phosphodieste	99.95
PRK09454	249	ugpQ cytoplasmic glycerophosphodiester phosphodies	99.95
cd08601	256	GDPD_SaGlpQ_like Glycerophosphodiester phosphodies	99.95
cd08612	300	GDPD_GDE4 Glycerophosphodiester phosphodiesterase	99.95
cd08568	226	GDPD_TmGDE_like Glycerophosphodiester phosphodiest	99.95
cd08573	258	GDPD_GDE1 Glycerophosphodiester phosphodiesterase	99.94
cd08582	233	GDPD_like_2 Glycerophosphodiester phosphodiesteras	99.94
cd08578	300	GDPD_NUC-2_fungi Putative glycerophosphodiester ph	99.94
cd08565	235	GDPD_pAtGDE_like Glycerophosphodiester phosphodies	99.94
cd08563	230	GDPD_TtGDE_like Glycerophosphodiester phosphodiest	99.94
cd08579	220	GDPD_memb_like Glycerophosphodiester phosphodieste	99.94
cd08609	315	GDPD_GDE3 Glycerophosphodiester phosphodiesterase	99.94
cd08575	264	GDPD_GDE4_like Glycerophosphodiester phosphodieste	99.94
cd08608	351	GDPD_GDE2 Glycerophosphodiester phosphodiesterase	99.94
cd08605	282	GDPD_GDE5_like_1_plant Glycerophosphodiester phosp	99.94
cd08607	290	GDPD_GDE5 Glycerophosphodiester phosphodiesterase	99.93
cd08564	265	GDPD_GsGDE_like Glycerophosphodiester phosphodiest	99.93
cd08572	293	GDPD_GDE5_like Glycerophosphodiester phosphodieste	99.93
cd08570	234	GDPD_YPL206cp_fungi Glycerophosphodiester phosphod	99.93
cd08566	240	GDPD_AtGDE_like Glycerophosphodiester phosphodiest	99.93
cd08561	249	GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodieste	99.93
cd08606	286	GDPD_YPL110cp_fungi Glycerophosphodiester phosphod	99.93
cd08567	263	GDPD_SpGDE_like Glycerophosphodiester phosphodiest	99.92
cd08585	237	GDPD_like_3 Glycerophosphodiester phosphodiesteras	99.92
cd08583	237	PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetic	99.9
PF03009	256	GDPD: Glycerophosphoryl diester phosphodiesterase	99.9
cd08613	309	GDPD_GDE4_like_1 Glycerophosphodiester phosphodies	99.89
COG0584	257	UgpQ Glycerophosphoryl diester phosphodiesterase [	99.87
cd08584	192	PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetic	99.85
cd08556	189	GDPD Glycerophosphodiester phosphodiesterase domai	99.74
cd08578	300	GDPD_NUC-2_fungi Putative glycerophosphodiester ph	99.7
cd08555	179	PI-PLCc_GDPD_SF Catalytic domain of phosphoinositi	99.66
KOG2258	341	consensus Glycerophosphoryl diester phosphodiester	99.42
cd08577	228	PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetic	99.38
cd08576	265	GDPD_like_SMaseD_PLD Glycerophosphodiester phospho	99.28
cd08584	192	PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetic	98.8
cd08577	228	PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetic	98.41
PF13653	30	GDPD_2: Glycerophosphoryl diester phosphodiesteras	98.26
cd08576	265	GDPD_like_SMaseD_PLD Glycerophosphodiester phospho	98.11
cd08592	229	PI-PLCc_gamma Catalytic domain of metazoan phospho	98.11
cd08627	229	PI-PLCc_gamma1 Catalytic domain of metazoan phosph	97.96
PF13653	30	GDPD_2: Glycerophosphoryl diester phosphodiesteras	97.64
KOG2421	417	consensus Predicted starch-binding protein [Genera	97.58
cd08597	260	PI-PLCc_PRIP_metazoa Catalytic domain of metazoan	97.38
smart00148	135	PLCXc Phospholipase C, catalytic domain (part); do	96.99
cd08631	258	PI-PLCc_delta4 Catalytic domain of metazoan phosph	96.36
cd08595	257	PI-PLCc_zeta Catalytic domain of metazoan phosphoi	96.33
cd08630	258	PI-PLCc_delta3 Catalytic domain of metazoan phosph	96.3
cd08632	253	PI-PLCc_eta1 Catalytic domain of metazoan phosphoi	96.29
cd08593	257	PI-PLCc_delta Catalytic domain of metazoan phospho	96.13
cd08626	257	PI-PLCc_beta4 Catalytic domain of metazoan phospho	96.09
PF10223	244	DUF2181: Uncharacterized conserved protein (DUF218	95.9
cd08594	227	PI-PLCc_eta Catalytic domain of metazoan phosphoin	95.55
cd08633	254	PI-PLCc_eta2 Catalytic domain of metazoan phosphoi	95.38
cd08558	226	PI-PLCc_eukaryota Catalytic domain of eukaryotic p	95.2
cd08599	228	PI-PLCc_plant Catalytic domain of plant phosphatid	95.19
cd08596	254	PI-PLCc_epsilon Catalytic domain of metazoan phosp	95.1
cd08628	254	PI-PLCc_gamma2 Catalytic domain of metazoan phosph	95.05
cd08629	258	PI-PLCc_delta1 Catalytic domain of metazoan phosph	95.0
cd08598	231	PI-PLC1c_yeast Catalytic domain of putative yeast	94.81
cd08623	258	PI-PLCc_beta1 Catalytic domain of metazoan phospho	94.37
cd08624	261	PI-PLCc_beta2 Catalytic domain of metazoan phospho	94.22
cd08591	257	PI-PLCc_beta Catalytic domain of metazoan phosphoi	94.02
cd08625	258	PI-PLCc_beta3 Catalytic domain of metazoan phospho	93.37
KOG1264	1267	consensus Phospholipase C [Lipid transport and met	91.71
KOG0169	746	consensus Phosphoinositide-specific phospholipase	91.56
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	91.21
PLN02230	598	phosphoinositide phospholipase C 4	89.27
PF04309	175	G3P_antiterm: Glycerol-3-phosphate responsive anti	87.44
COG1830	265	FbaB DhnA-type fructose-1,6-bisphosphate aldolase	86.34
PLN02228	567	Phosphoinositide phospholipase C	86.26
PLN02952	599	phosphoinositide phospholipase C	84.71
KOG2421	417	consensus Predicted starch-binding protein [Genera	83.97
cd08592	229	PI-PLCc_gamma Catalytic domain of metazoan phospho	83.92
cd08589	324	PI-PLCc_SaPLC1_like Catalytic domain of Streptomyc	83.65
cd00137	274	PI-PLCc Catalytic domain of prokaryotic and eukary	82.05
PLN02223	537	phosphoinositide phospholipase C	81.7
cd08627	229	PI-PLCc_gamma1 Catalytic domain of metazoan phosph	81.02
PLN02222	581	phosphoinositide phospholipase C 2	80.62

>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

Probab=100.00  E-value=8.9e-55  Score=449.48  Aligned_cols=278  Identities=27%  Similarity=0.463  Sum_probs=242.5

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCC--CeEEeceeEccCCeEEEecCCCcccccCcccccccccccc-cccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGA--DIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSV-PEIQKERG  346 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~Ga--D~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~-~~~~~~~G  346 (671)
                      |+||||||+||.+||||++||+.|+++||  |+||||||+||||++||+||.+|+|+|++...|++|.+++ .+++..+|
T Consensus         1 plVIAHRGasg~~PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkDgvlVv~HD~~L~rtT~v~~~F~~r~~t~~idG~~~~g   80 (299)
T cd08603           1 PLVIARGGFSGLFPDSSLFAYQFAASSSSPDVALWCDLQLTKDGVGICLPDLNLDNSTTIARVYPKRKKTYSVNGVSTKG   80 (299)
T ss_pred             CeEEecCCCCCCCCcchHHHHHHHHHcCCCCCEEEEEeeECcCCcEEEeCCccccccCCCccccccccccccccccccCC
Confidence            68999999999999999999999999999  4799999999999999999999999999877899998764 59999999


Q ss_pred             cccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHH
Q 005894          347 IFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDA  426 (671)
Q Consensus       347 ~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~  426 (671)
                      +++.|+||+||++|++....        ..|++.+.+.++||||+|+|++++..   ++++|||.+.++. ..|+++++.
T Consensus        81 ~~~~d~TlaELk~L~~~~~~--------~~r~~~~~g~~~IpTLeEvl~~~~~~---gi~i~ie~~~~~~-~~gl~~~~~  148 (299)
T cd08603          81 WFSVDFTLAELQQVTLIQGI--------FSRTPIFDGQYPISTVEDVVTLAKPE---GLWLNVQHDAFYQ-QHNLSMSSY  148 (299)
T ss_pred             ceeccCCHHHHhhCCCCCCc--------ccCCcccCCcCCCCCHHHHHHHhHhc---CeEEEEecHHHHH-HcCCCHHHH
Confidence            89999999999999986322        23667776666999999999999874   8999999999887 589999999


Q ss_pred             HHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC---CCceEEE-Eeecc-cC--------CCChhHHHHHHHHHHHhcC
Q 005894          427 VTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV---PAYKKVL-HIRKE-VS--------AAPREVVEEIKKYASAVTV  493 (671)
Q Consensus       427 v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~---p~~~~~~-l~~~~-~~--------d~~~~~l~~i~~~a~~v~~  493 (671)
                      |+++|++++       .++||||+...|+++++.   +++++++ +.+.. ..        ++. .++++|++||++|++
T Consensus       149 l~~~L~~~~-------~v~iQSfe~~~L~~l~~~~~~~~~~Lv~~l~~~~~~~~~~~~~y~~~~-~~L~eIa~yAdgig~  220 (299)
T cd08603         149 LLSLSKTVK-------VDYISSPEVGFLKSIGGRVGRNGTKLVFRFLDKDDVEPSTNQTYGSIL-KNLTFIKTFASGILV  220 (299)
T ss_pred             HHHHHHHcC-------cEEEECCCHHHHHHHHHhcccCCCCeeeEeccCCCcCCCCCccHHHHH-HhHHHHHHHHhhcCC
Confidence            999999875       489999999999999875   5778886 44331 11        111 158899999999999


Q ss_pred             CceeeecCC-CcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcC---ccEEEECChhhHHH
Q 005894          494 TRTSVISTT-ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVG---VDGITTEFPATASK  569 (671)
Q Consensus       494 ~~~~v~~~~-~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~G---VDgIiTD~P~~~~~  569 (671)
                      ++.+++|.. .+++...+.+|+++|++||.||+||++++.. ++++|+.||..|+..++ +.|   ||||+||||+++.+
T Consensus       221 ~k~~i~p~~~~~~~~~~t~lV~~Ah~agL~Vh~~tfr~e~~-~~~~~~~d~~~e~~~~~-~~g~~~vDGvfTDfP~~a~~  298 (299)
T cd08603         221 PKSYIWPVDSDQYLQPATSLVQDAHKAGLEVYASGFANDFD-ISYNYSYDPVAEYLSFV-GNGNFSVDGVLSDFPITASE  298 (299)
T ss_pred             ChhheeecCCCCcccCccHHHHHHHHcCCeEEEEEeeCCCC-ccccccCCHHHHHHHHH-hcCCCCCCEEEecCchhhcc
Confidence            999999875 4567777899999999999999999999987 99999999999999996 767   99999999998764

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP

>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

Probab=100.00  E-value=7.4e-53  Score=443.03  Aligned_cols=296  Identities=47%  Similarity=0.761  Sum_probs=244.9

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccc-ccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATS-VPEIQKERGIF  348 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~-~~~~~~~~G~~  348 (671)
                      |+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||....|++|.++ +.+++++.|++
T Consensus         1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~~~~~~g~~   80 (302)
T cd08571           1 PLVIARGGASGDYPDSTDLAYQKAISDGADVLDCDVQLTKDGVPICLPSINLDNSTTIASVFPKRKKTYVVEGQSTSGIF   80 (302)
T ss_pred             CeEEeCCCcCCCCCcchHHHHHHHHHcCCCEEEeeeeEcCCCcEEEeCCchhcCCcccccccccccceecccCcccCCee
Confidence            68999999999999999999999999999999999999999999999999999999988888887654 56778889977


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      +.++||+||++|+++...+|+.    .+|++.+.++++||||+|+|++++....++++||||.+....+..+..+++.++
T Consensus        81 v~d~T~aeL~~l~~~~~~~~~~----~~~~~~~~~~~~IptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~  156 (302)
T cd08571          81 SFDLTWAEIQTLKPIISNPFSV----LFRNPRNDNAGKILTLEDFLTLAKPKSLSGVWINVENAAFLAEHKGLLSVDAVL  156 (302)
T ss_pred             eeeCCHHHHhhCcccccCcccc----cCCCcccCCCCCcCCHHHHHHhhhccCCceEEEEccCchhhhhhccccHHHHHH
Confidence            9999999999999976555532    346666666789999999999998753347999999875433222346889999


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC---CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCC-Cc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV---PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTT-ES  504 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~---p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~-~~  504 (671)
                      ++++++++... .++|+|+||++++|++++++   |.++++++++....+.....+.++..+|.+++++...+.+.. ..
T Consensus       157 ~~l~~~~~~~~-~~~v~i~SF~~~~L~~~~~~~~~p~v~~~~l~~~~~~~~~~~~l~~~~~~a~~v~~~~~~~~~~~~~~  235 (302)
T cd08571         157 TSLSKAGYDQT-AKKVYISSPDSSVLKSFKKRVGTKLVFRVLDVDDTEPDTLLSNLTEIKKFASGVLVPKSYIWPVDSDS  235 (302)
T ss_pred             HHHHHcCCCCC-CCCEEEeCCCHHHHHHHHhccCCCceEEEeecCCCcCCCChhHHHHHHHhcCccccChhHeeecCCCC
Confidence            99999998521 15999999999999999987   778888887543222224557778888988888777676532 12


Q ss_pred             ccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhc-CccEEEECChhhHHHH
Q 005894          505 FTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGV-GVDGITTEFPATASKY  570 (671)
Q Consensus       505 ~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~-GVDgIiTD~P~~~~~~  570 (671)
                      +....+.+|+++|++|+.|++||+|++...++|+|+.|+..++.+++..+ ||||||||+|+++.+|
T Consensus       236 ~~~~~~~~V~~ah~~Gl~V~~wTvn~~~~~~~~~~~~~~~~~~~~~~~~~~gVDGiiTD~P~~~~~~  302 (302)
T cd08571         236 FLTPQTSVVQDAHKAGLEVYVSGFANEFVSLAYDYSADPTLEILSFVGNGNSVDGVITDFPATAARA  302 (302)
T ss_pred             cccCccHHHHHHHHcCCEEEEEEEecCcccccccccCCHHHHHHHHHHhcCCCCEEEecCchhhhcC
Confidence            34445689999999999999999999998899999999999999997555 9999999999998764

This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv

>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

Probab=100.00  E-value=1.4e-52  Score=440.83  Aligned_cols=298  Identities=57%  Similarity=0.937  Sum_probs=244.2

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcc-cccccccccccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA-TVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~-~~f~~r~~~~~~~~~~~G~~  348 (671)
                      |+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||.. ..|++|+++++++.+.+|++
T Consensus         1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~~~~~~~~~   80 (300)
T cd08604           1 PLIISHNGASGDYPGCTDLAYQKAVKDGADVIDCSVQMSKDGVPFCLDSINLINSTTVATSKFSNRATTVPEIGSTSGIF   80 (300)
T ss_pred             CeEEecCCcCCCCCcchHHHHHHHHHcCCCEEEEeeeEcCCCCEEEeccccccCcccCCcccccccccccccccccCcee
Confidence            68999999999999999999999999999999999999999999999999999999954 48899888877777778878


Q ss_pred             cccCCHHHHhccCCCcC-CCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHH
Q 005894          349 SFDLTWTEIQSLKPQIS-SPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAV  427 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~-~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v  427 (671)
                      +.++||+||++|+++.. .||..   +..|.+.+.++++||||+|+|+++++.+.++++||||.+....+..+..+++++
T Consensus        81 v~d~t~~eL~~l~~~~~~~~~~~---~~~~~~~~~~~~~iptL~Evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v  157 (300)
T cd08604          81 TFDLTWSEIQTLKPAISNPYSVT---GLFRNPANKNAGKFLTLSDFLDLAKNKSLSGVLINVENAAYLAEKKGLDVVDAV  157 (300)
T ss_pred             eecCcHHHHhhCccCCcCccccc---CcCCCcccCCCCCCCCHHHHHHHHHhcCCceEEEEeeccchhhhccCccHHHHH
Confidence            99999999999998742 33331   145667776668999999999999876434799999976543222345789999


Q ss_pred             HHHHHhcCCCCCCCceEEEEcCChHHHHHHhcCCCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894          428 TKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT  507 (671)
Q Consensus       428 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~  507 (671)
                      +++++++++.....++|+|+||++++|+++++..+++++++++....+.....++++..+|++++++...+.+....++.
T Consensus       158 ~~~l~~~~~~~~~~~~v~i~SF~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~v~~~~~~~~~~~~~~~~  237 (300)
T cd08604         158 LDALTNAGYDNQTAQKVLIQSTDSSVLAAFKKQISYERVYVVDETIRDASDSSIEEIKKFADAVVIDRGSVFPVSTSFLT  237 (300)
T ss_pred             HHHHHHcCCCCCCCCeEEEEcCCHHHHHHHHhccCCceEEEecCcccccChhHHHHHHHhccEEEeChhhcccccCCccc
Confidence            99999999863221489999999999999999877889998865434433444566667787788776666554333444


Q ss_pred             cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHH
Q 005894          508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY  570 (671)
Q Consensus       508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~  570 (671)
                      ..+++|+++|++|+.|++||+|++...++++|+.||..++.+++.++||||||||+|+++.+|
T Consensus       238 ~~~~~v~~a~~~Gl~v~vwTvn~~~~~~~~~~~~~~~~~~~~~~~~~GVdgIiTD~P~~~~~~  300 (300)
T cd08604         238 RQTNVVEKLQSANLTVYVEVLRNEFVSLAFDFFADPTVEINSYVQGAGVDGFITEFPATAARY  300 (300)
T ss_pred             CchHHHHHHHHCCCEEEEEEecCCccccchhccCCHHHHHHHHHHHcCCCEEEecCchhhhcC
Confidence            455899999999999999999999888999999999987777666899999999999998764

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP

>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

Probab=100.00  E-value=7.3e-52  Score=427.80  Aligned_cols=255  Identities=53%  Similarity=0.945  Sum_probs=234.6

Q ss_pred             CCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCccCCC
Q 005894            8 SNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDN   87 (671)
Q Consensus         8 ~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~f~~   87 (671)
                      ++.+||||||+||||++||+||.+|+||||+++.||+|+++|.|||+..+|||+.|||++||+++++.+.++.|++.|++
T Consensus        30 ~~d~IE~DV~lTkDgvlVv~HD~~L~rtT~v~~~F~~r~~t~~idG~~~~g~~~~d~TlaELk~L~~~~~~~~r~~~~~g  109 (299)
T cd08603          30 PDVALWCDLQLTKDGVGICLPDLNLDNSTTIARVYPKRKKTYSVNGVSTKGWFSVDFTLAELQQVTLIQGIFSRTPIFDG  109 (299)
T ss_pred             CCCEEEEEeeECcCCcEEEeCCccccccCCCccccccccccccccccccCCceeccCCHHHHhhCCCCCCcccCCcccCC
Confidence            34689999999999999999999999999999999999999999999999999999999999999998877778889985


Q ss_pred             CCCCCChhhh--------------hHHHHHhcCccHHHHHHHHHHHcCCceEEEeCCChHHHHHhhhhcCCCCcceEEEe
Q 005894           88 TQPIPTPDTI--------------YDLFYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMV  153 (671)
Q Consensus        88 ~~~IptL~ev--------------~~~~~~~~~~~~~~~v~~~l~~~~~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~  153 (671)
                      .++||||+|+              ++.|+.++|++++++|+++|++++  .+||||||.+.|+++++.+...+++++|.+
T Consensus       110 ~~~IpTLeEvl~~~~~~gi~i~ie~~~~~~~~gl~~~~~l~~~L~~~~--~v~iQSfe~~~L~~l~~~~~~~~~~Lv~~l  187 (299)
T cd08603         110 QYPISTVEDVVTLAKPEGLWLNVQHDAFYQQHNLSMSSYLLSLSKTVK--VDYISSPEVGFLKSIGGRVGRNGTKLVFRF  187 (299)
T ss_pred             cCCCCCHHHHHHHhHhcCeEEEEecHHHHHHcCCCHHHHHHHHHHHcC--cEEEECCCHHHHHHHHHhcccCCCCeeeEe
Confidence            5699999999              567777789999999999999998  699999999999999975422258999877


Q ss_pred             cCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCC
Q 005894          154 LEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSY  233 (671)
Q Consensus       154 ~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~  233 (671)
                      ++.+...++++++|+.++++|++|++||+||++++.+|+|.++ ++++..+|++|++||++||+||+|||+||...+++|
T Consensus       188 ~~~~~~~~~~~~~y~~~~~~L~eIa~yAdgig~~k~~i~p~~~-~~~~~~~t~lV~~Ah~agL~Vh~~tfr~e~~~~~~~  266 (299)
T cd08603         188 LDKDDVEPSTNQTYGSILKNLTFIKTFASGILVPKSYIWPVDS-DQYLQPATSLVQDAHKAGLEVYASGFANDFDISYNY  266 (299)
T ss_pred             ccCCCcCCCCCccHHHHHHhHHHHHHHHhhcCCChhheeecCC-CCcccCccHHHHHHHHcCCeEEEEEeeCCCCccccc
Confidence            7777777888999999999999999999999999999999886 788988999999999999999999999997799999


Q ss_pred             CCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          234 NFEPEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       234 ~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                      +.||..|++.+++.|.++|||++||||.++.+
T Consensus       267 ~~d~~~e~~~~~~~g~~~vDGvfTDfP~~a~~  298 (299)
T cd08603         267 SYDPVAEYLSFVGNGNFSVDGVLSDFPITASE  298 (299)
T ss_pred             cCCHHHHHHHHHhcCCCCCCEEEecCchhhcc
Confidence            99999999999998888899999999998764

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP

>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins

Probab=100.00  E-value=2.4e-49  Score=417.70  Aligned_cols=285  Identities=27%  Similarity=0.433  Sum_probs=230.8

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcc--ccccccccc-ccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA--TVFMSKATS-VPEIQKERG  346 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~--~~f~~r~~~-~~~~~~~~G  346 (671)
                      |+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+..  ..|++|++. ..++.+..|
T Consensus         1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DVqlTkDg~lVv~HD~~l~rtt~~~~~~~~~~r~~~~~i~~~~~~~   80 (309)
T cd08602           1 PLVIAHRGASGYRPEHTLAAYQLAIEQGADFIEPDLVSTKDGVLICRHEPELSGTTDVADHPEFADRKTTKTVDGVNVTG   80 (309)
T ss_pred             CeEEecCCCCCCCCccHHHHHHHHHHcCCCEEEEeeeECCCCcEEEeCCCccccccCccccccccccccccccCCcccCC
Confidence            68999999999999999999999999999999999999999999999999999999953  457777654 344555678


Q ss_pred             cccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccC-----cccEEEEecCchhhhhhcCC
Q 005894          347 IFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKA-----VSGVLININNAAYLASKKGL  421 (671)
Q Consensus       347 ~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~-----~~~i~IeIK~~~~~~~~~~~  421 (671)
                      ++|.++||+||++|+++.  +|..      +++.+.+.++||||+|+|+++++.+     .++++||||.+.......+.
T Consensus        81 ~~v~d~t~~eL~~l~~~~--~~~~------~~~~~~~~~~iptL~Evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~  152 (309)
T cd08602          81 WFTEDFTLAELKTLRARQ--RLPY------RDQSYDGQFPIPTFEEIIALAKAASAATGRTVGIYPEIKHPTYFNAPLGL  152 (309)
T ss_pred             eeeccCCHHHHhhCccCC--cCcc------cCcccCCCcCcCCHHHHHHHHHhhhhcccccceeEEeecCchhcccccCC
Confidence            679999999999999873  3321      2334445569999999999998742     36899999976543222456


Q ss_pred             cHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcCCCceEEEEeecccCC---------------CChhHHHHHHH
Q 005894          422 GVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSA---------------APREVVEEIKK  486 (671)
Q Consensus       422 ~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~l~~~~~~d---------------~~~~~l~~i~~  486 (671)
                      .++++|+++++++++... .++|+|+|||+++|++++++-+++++++++.....               .....++++..
T Consensus       153 ~~~~~v~~~l~~~~~~~~-~~~v~i~SFd~~~L~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (309)
T cd08602         153 PMEDKLLETLKKYGYTGK-KAPVFIQSFEVTNLKYLRNKTDLPLVQLIDDATIPPQDTPEGDSRTYADLTTDAGLKEIAT  231 (309)
T ss_pred             CHHHHHHHHHHHcCCCCC-CCCEEEECCCHHHHHHHHhhhCCCeEEEecCCCCCcccccccCccchhhhcCHHHHHHHHh
Confidence            799999999999998631 14999999999999999988677899988543210               22335566667


Q ss_pred             HHHHhcCCceeeecCC-CcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894          487 YASAVTVTRTSVISTT-ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP  564 (671)
Q Consensus       487 ~a~~v~~~~~~v~~~~-~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P  564 (671)
                      +|++++++...+.+.. .++....+++|+++|++|++|++||+|++...++++|++|+..++.+++ ++||||||||+|
T Consensus       232 ~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~a~~~gl~v~~wTvn~~~~~~~~~~~~~~~~~~~~l~-~~GVdgiiTD~P  309 (309)
T cd08602         232 YADGIGPWKDLIIPSDANGRLGTPTDLVEDAHAAGLQVHPYTFRNENTFLPPDFFGDPYAEYRAFL-DAGVDGLFTDFP  309 (309)
T ss_pred             hceEEecchheEEecCCCCcccCccHHHHHHHHcCCEEEEEEecCCCcccCcccCCCHHHHHHHHH-HhCCCEEeCCCC
Confidence            7888888777666532 2234456789999999999999999999998999999999999999985 899999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.

>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins

Probab=100.00  E-value=1.7e-47  Score=405.21  Aligned_cols=283  Identities=25%  Similarity=0.305  Sum_probs=214.1

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFS  349 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i  349 (671)
                      |+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||....|++|...     .+.| +|
T Consensus         1 ~lviAHRG~s~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~-----~g~~-~v   74 (318)
T cd08600           1 KIIIAHRGASGYLPEHTLEAKALAYAQGADYLEQDVVLTKDDKLVVIHDHYLDNVTNVAEKFPDRKRK-----DGRY-YV   74 (318)
T ss_pred             CeEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEeeeeECcCCcEEEeCCchhhccCCccccccccccc-----CCce-eE
Confidence            68999999999999999999999999999999999999999999999999999999977777777543     2455 79


Q ss_pred             ccCCHHHHhccCCCcCCCCCCC---CCC--CCCCcccccCCcccCHHHHHHHHhcc-----CcccEEEEecCchhhhhhc
Q 005894          350 FDLTWTEIQSLKPQISSPFDKS---NPP--IIRNPEAKNKGKFVTLDGFLEFAKTK-----AVSGVLININNAAYLASKK  419 (671)
Q Consensus       350 ~dlT~~EL~~L~~~~~~~f~~~---~~~--~~r~~~~~~~~~ipTLeEvL~~~~~~-----~~~~i~IeIK~~~~~~~~~  419 (671)
                      .++||+||++|+++  .||+..   ..+  ..|.+....+++||||+|+|+++++.     ..++++||||.+.... ..
T Consensus        75 ~dlT~aEL~~ld~g--~~f~~~~~~~~~~~~~~~~~~~~~~~IptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~-~~  151 (318)
T cd08600          75 IDFTLDELKSLSVT--ERFDIENGKKVQVYPNRFPLWKSDFKIHTLEEEIELIQGLNKSTGKNVGIYPEIKAPWFHH-QE  151 (318)
T ss_pred             eeCcHHHHhhCCCC--CCcccccccccccccccCcccCCCCccCCHHHHHHHHHHhhhhcCCcceEEEeecCchhhh-hc
Confidence            99999999999988  455421   000  11222223467999999999999752     1358999999764322 23


Q ss_pred             CCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhc-C-C----CceEEEEeecc-cCC-----------------
Q 005894          420 GLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQD-V-P----AYKKVLHIRKE-VSA-----------------  475 (671)
Q Consensus       420 ~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~-~-p----~~~~~~l~~~~-~~d-----------------  475 (671)
                      +.++++.++++++++++... ..+|+|+||++++|+++|+ . |    ++++++++... ...                 
T Consensus       152 ~~~~~~~v~~~l~~~~~~~~-~~~v~i~SF~~~~L~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  230 (318)
T cd08600         152 GKDIAAATLEVLKKYGYTSK-NDKVYLQTFDPNELKRIKNELLPKMGMDLKLVQLIAYTDWGETQEKDPGGWVNYDYDWM  230 (318)
T ss_pred             cccHHHHHHHHHHHcCCCCC-CCeEEEEeCCHHHHHHHHHhhCccccCCcceEEEeccCCCCcccccccCCccccchhhh
Confidence            45799999999999998631 1489999999999999996 6 9    99999998521 100                 


Q ss_pred             CChhHHHHHHHHHHHhcCCceeeecCCCc-ccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhc
Q 005894          476 APREVVEEIKKYASAVTVTRTSVISTTES-FTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGV  554 (671)
Q Consensus       476 ~~~~~l~~i~~~a~~v~~~~~~v~~~~~~-~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~  554 (671)
                      .+...+.+++.+|+++++++..+.+.... +...++++|+++|++|+.|++||+|+++..++   +.|......+++.++
T Consensus       231 ~~~~~l~~~~~~a~~i~~~~~~l~~~~~~~~~~~~~~~V~~ah~~Gl~V~~wTvn~~~~~~~---~~~~~~~~~~~l~~~  307 (318)
T cd08600         231 FTKGGLKEIAKYADGVGPWYSMIIEEKSSKGNIVLTDLVKDAHEAGLEVHPYTVRKDALPEY---AKDADQLLDALLNKA  307 (318)
T ss_pred             cCHHHHHHHHHhheeccCCHHHcccccCCCCccChHHHHHHHHHcCCEEEEEeccCCccccc---cCCHHHHHHHHHHhc
Confidence            02234667778888888877655442111 23345789999999999999999999973222   334433223333589


Q ss_pred             CccEEEECChh
Q 005894          555 GVDGITTEFPA  565 (671)
Q Consensus       555 GVDgIiTD~P~  565 (671)
                      ||||||||+|+
T Consensus       308 GVDGiiTD~P~  318 (318)
T cd08600         308 GVDGVFTDFPD  318 (318)
T ss_pred             CCcEEEcCCCC
Confidence            99999999995

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP

>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins

Probab=100.00  E-value=1.5e-47  Score=403.14  Aligned_cols=278  Identities=28%  Similarity=0.394  Sum_probs=212.5

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFS  349 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i  349 (671)
                      |+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+..+.++.+      +....|..|
T Consensus         1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~t~~~~~~~~~------~~~~~~~~v   74 (296)
T cd08559           1 PLVIAHRGASGYAPEHTLAAYALAIEMGADYIEQDLVMTKDGVLVARHDPTLDRTTNVAEHFPFR------GRKDTGYFV   74 (296)
T ss_pred             CeEEEeCCcCCCCccchHHHHHHHHHhCCCEEEEeeEEccCCCEEEeccchhhcCCCcccccccc------ccCCCCeee
Confidence            78999999999999999999999999999999999999999999999999999999955444332      112333489


Q ss_pred             ccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccC-----cccEEEEecCchhhhhhcCCcHH
Q 005894          350 FDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKA-----VSGVLININNAAYLASKKGLGVV  424 (671)
Q Consensus       350 ~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~-----~~~i~IeIK~~~~~~~~~~~~~~  424 (671)
                      .++||+||++|+++  .||...+  ..|.+.+..+++||||+|+|+++++..     .++++||||...... ..+..++
T Consensus        75 ~~~t~~eL~~l~~~--~~~~~~~--~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~IEiK~~~~~~-~~~~~~~  149 (296)
T cd08559          75 IDFTLAELKTLRAG--SWFNQRY--PERAPSYYGGFKIPTLEEVIELAQGLNKSTGRNVGIYPETKHPTFHK-QEGPDIE  149 (296)
T ss_pred             ecCcHHHHhcCCCC--Ccccccc--cccCccccCCCCcCCHHHHHHHHHhhhhccCCcceEEEEecChhhhh-hcCCCHH
Confidence            99999999999987  3454321  224444445689999999999998731     358999999764321 1245789


Q ss_pred             HHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCC-----------CChhHHHHHHHHHHHhc
Q 005894          425 DAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSA-----------APREVVEEIKKYASAVT  492 (671)
Q Consensus       425 ~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d-----------~~~~~l~~i~~~a~~v~  492 (671)
                      ++|+++|+++++.. ..++|+|+||++++|+++|++ |++++++++......           .....+..++.+|.+++
T Consensus       150 ~~v~~~l~~~~~~~-~~~~v~i~SF~~~~L~~~r~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  228 (296)
T cd08559         150 EKLLEVLKKYGYTG-KNDPVFIQSFEPESLKRLRNETPDIPLVQLIDYGDWAETDKKYTYAWLTTDAGLKEIAKYADGIG  228 (296)
T ss_pred             HHHHHHHHHcCCCC-CCCCEEEecCCHHHHHHHHHhCCCCcEEEEecCCCCCccccccccchhcCHHHHHHHHHHhhhhC
Confidence            99999999998752 114999999999999999999 999999998653221           12344555555777777


Q ss_pred             CCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhc-CccEEEECCh
Q 005894          493 VTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGV-GVDGITTEFP  564 (671)
Q Consensus       493 ~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~-GVDgIiTD~P  564 (671)
                      +....+..........++++|+++|++|+.|++||+|++...++++|..    ++.+++ ++ ||||||||+|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~v~~a~~~Gl~v~~WTvn~~~~~~~~~~~~----~~~~l~-~~~GVdgIiTD~P  296 (296)
T cd08559         229 PWKSLIIPEDSNGLLVPTDLVKDAHKAGLLVHPYTFRNENLFLAPDFKQ----DMDALY-NAAGVDGVFTDFP  296 (296)
T ss_pred             CCHHhccccccccccCchHHHHHHHHcCCEEEEEEecCccccccccccc----CHHHHH-HHhCCCEEEcCCC
Confidence            6554433221112333479999999999999999999976555555554    577774 77 9999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),

>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional

Probab=100.00  E-value=4.1e-47  Score=406.26  Aligned_cols=294  Identities=23%  Similarity=0.319  Sum_probs=221.6

Q ss_pred             cCCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccc
Q 005894          267 IDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERG  346 (671)
Q Consensus       267 i~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G  346 (671)
                      ..+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+....|+.|.+.     .+.|
T Consensus        24 ~~~pliiAHRGas~~~PENTl~Af~~A~~~GaD~IE~DV~lTkDg~lVv~HD~~l~rtT~~~~~~~~~~~~-----~g~~   98 (355)
T PRK11143         24 SAEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDQLVVLHDHYLDRVTDVAERFPDRARK-----DGRY   98 (355)
T ss_pred             CCCcEEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEeeeEccCCcEEEeCCchhcccCCccccccccccc-----CCce
Confidence            34899999999999999999999999999999999999999999999999999999999977778776543     2444


Q ss_pred             cccccCCHHHHhccCCCcCCCCCCC---CCC--CCCCcccccCCcccCHHHHHHHHhcc-----CcccEEEEecCchhhh
Q 005894          347 IFSFDLTWTEIQSLKPQISSPFDKS---NPP--IIRNPEAKNKGKFVTLDGFLEFAKTK-----AVSGVLININNAAYLA  416 (671)
Q Consensus       347 ~~i~dlT~~EL~~L~~~~~~~f~~~---~~~--~~r~~~~~~~~~ipTLeEvL~~~~~~-----~~~~i~IeIK~~~~~~  416 (671)
                       ++.++||+||++|+++  .||+..   ..+  ..|.+....+++||||+|+|++++..     ..++++||||......
T Consensus        99 -~v~dlT~aEL~~ld~~--~~f~~~~g~~~~~~~~~~~~~~~~~~IPTL~Evl~~~~~~~~~~~~~~~l~IEiK~~~~~~  175 (355)
T PRK11143         99 -YAIDFTLDEIKSLKFT--EGFDIENGKKVQVYPGRFPMGKSDFRVHTFEEEIEFIQGLNHSTGKNIGIYPEIKAPWFHH  175 (355)
T ss_pred             -eEeeCcHHHHhhCCCC--CCcccccccccccccccccccCCCCccCCHHHHHHHHHHhhhhcCCCceeeEeccCccccc
Confidence             8999999999999998  354310   000  12333333468999999999999863     1357999999864321


Q ss_pred             hhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhc-C-CCc----eEEEEeecc-cC-C-------------
Q 005894          417 SKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQD-V-PAY----KKVLHIRKE-VS-A-------------  475 (671)
Q Consensus       417 ~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~-~-p~~----~~~~l~~~~-~~-d-------------  475 (671)
                       ..+.+++++|+++|+++++... .++|+|+||++++|+++++ . |++    ++++++... .. .             
T Consensus       176 -~~~~~~~~~v~~~l~~~g~~~~-~~~v~i~SFd~~~L~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  253 (355)
T PRK11143        176 -QEGKDIAAKVLEVLKKYGYTGK-DDKVYLQCFDANELKRIKNELEPKMGMDLKLVQLIAYTDWNETQEKQPDGKWVNYN  253 (355)
T ss_pred             -ccchhHHHHHHHHHHHhCCCCC-CCCEEEeCCCHHHHHHHHhhcCccccCCcceEEEeccCCCcccccccccCcccccc
Confidence             2345689999999999998521 1599999999999999988 6 874    888886421 10 0             


Q ss_pred             C----ChhHHHHHHHHHHHhcCCceeeecC-CCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHH
Q 005894          476 A----PREVVEEIKKYASAVTVTRTSVIST-TESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATF  550 (671)
Q Consensus       476 ~----~~~~l~~i~~~a~~v~~~~~~v~~~-~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~  550 (671)
                      .    ....+.++..+|.++.+....+.+. ...+....+++|+++|++|+.|++||||++.  ++ +|..|+......+
T Consensus       254 ~~~~~~~~~~~~~~~~a~~i~p~~~~l~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTVn~~~--~~-~~~~d~~~~~~~~  330 (355)
T PRK11143        254 YDWMFKPGAMKEVAKYADGIGPDYHMLVDETSTPGNIKLTGMVKEAHQAKLVVHPYTVRADQ--LP-EYATDVNQLYDIL  330 (355)
T ss_pred             hhhhcChhhHHHHHhhceeecCChhheeeccccCCccChHHHHHHHHHcCCEEEEEEecccc--ch-hhhcChHHHHHHH
Confidence            0    1123555666677776654433221 1233445568999999999999999999884  43 7888877433332


Q ss_pred             HhhcCccEEEECChhhHHHHHHh
Q 005894          551 AQGVGVDGITTEFPATASKYFRS  573 (671)
Q Consensus       551 l~~~GVDgIiTD~P~~~~~~~~~  573 (671)
                      +.++||||||||+|+++.+++.+
T Consensus       331 ~~~~GVDGIiTD~P~~~~~~l~~  353 (355)
T PRK11143        331 YNQAGVDGVFTDFPDKAVKFLNK  353 (355)
T ss_pred             HHccCCCEEEcCChHHHHHHHhc
Confidence            35899999999999999998865

>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins

Probab=100.00  E-value=1.3e-46  Score=400.78  Aligned_cols=299  Identities=18%  Similarity=0.220  Sum_probs=220.2

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCC-CcccccCcc--cccccccccc-ccccc-
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESP-DLIGKTTAA--TVFMSKATSV-PEIQK-  343 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~-~L~rtT~~~--~~f~~r~~~~-~~~~~-  343 (671)
                      .++||||||++|.+||||++||++|+++|||+||||||+||||++||+||. +|+||||+.  +.|++|+++. .++.. 
T Consensus        16 ~~~iIAHRGasg~~PEnTl~Af~~Ai~~Gad~IE~DV~lTkDg~lVV~HD~~~L~rtTnv~~~pe~a~r~~~~~~~g~~~   95 (356)
T cd08560          16 TDFSIGHRGAPLQFPEHTRESYEAAARMGAGILECDVTFTKDRELVCRHSQCDLHTTTNILAIPELAAKCTQPFTPANAT   95 (356)
T ss_pred             CceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCccccCccCCccccchhhhccccccccccc
Confidence            678999999999999999999999999999999999999999999999997 899999953  6788887652 22222 


Q ss_pred             ---ccccccccCCHHHHhccCCCcC--CCCC------CCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCc
Q 005894          344 ---ERGIFSFDLTWTEIQSLKPQIS--SPFD------KSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNA  412 (671)
Q Consensus       344 ---~~G~~i~dlT~~EL~~L~~~~~--~~f~------~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~  412 (671)
                         ..++++.|+||+||++|+.++.  .+++      ....|.+|+..+.++++||||+|+|+++++.+ ++++||||.+
T Consensus        96 ~~~~~~~~v~d~TlaELk~L~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~IPTL~Evl~lv~~~~-v~l~iEiK~~  174 (356)
T cd08560          96 KPASAECCTSDITLAEFKSLCGKMDASNPSATTPEEYQNGTPDWRTDLYATCGTLMTHKESIALFKSLG-VKMTPELKSP  174 (356)
T ss_pred             cccccCcchhhCcHHHHhcCCCccccccccccccccccccccccccccccCCCCCCCHHHHHHHHHhcC-ceEEEEeCCC
Confidence               2345899999999999987532  1111      00123466666766789999999999998753 6899999987


Q ss_pred             hhhhhhcC----CcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceE--EEEeecc-cCCC---ChhHH
Q 005894          413 AYLASKKG----LGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKK--VLHIRKE-VSAA---PREVV  481 (671)
Q Consensus       413 ~~~~~~~~----~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~--~~l~~~~-~~d~---~~~~l  481 (671)
                      .......|    ..++++++++++++++..   ++|+|||||++.|+++++. |++++  +++.+.. ..+.   ....+
T Consensus       175 ~~~~~~~g~~~~~~~~~~l~~~l~~~g~~~---~~v~iqSFd~~~L~~~~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~l  251 (356)
T cd08560         175 SVPMPFDGNYTQEDYAQQMIDEYKEAGVPP---SRVWPQSFNLDDIFYWIKNEPDFGRQAVYLDDRDDTADFPATWSPSM  251 (356)
T ss_pred             cccccccccccHHHHHHHHHHHHHHcCCCC---CCEEEECCCHHHHHHHHHhCCCCCeeEEEEccCCccccccccHHHHH
Confidence            65321111    158899999999999863   5999999999999999888 97755  4443321 0000   11234


Q ss_pred             HHH-HHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCccccc--c-ccc---------CCChHHHHH
Q 005894          482 EEI-KKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSI--A-FDY---------LADPLIEVA  548 (671)
Q Consensus       482 ~~i-~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~--~-~d~---------~~D~~~e~~  548 (671)
                      +++ ..+++++++++..+.+.........+.+|+++|++|+.|++||++++...+  + +.|         .+|...++.
T Consensus       252 ~~i~a~~a~~i~P~~~~l~~~~~~~~~~~~~~v~~Ah~~GL~V~~WTvr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (356)
T cd08560         252 DELKARGVNIIAPPIWMLVDPDENGKIVPSEYAKAAKAAGLDIITWTLERSGPLASGGGWYYQTIEDVINNDGDMYNVLD  331 (356)
T ss_pred             HHHHhCCccEecCchhhccccccccccCCHHHHHHHHHcCCEEEEEEeecCcccccCcccccccccccccccccHHHHHH
Confidence            444 334666777655554432222335678999999999999999998775433  3 333         344456777


Q ss_pred             HHHhhcCccEEEECChhhHHHHH
Q 005894          549 TFAQGVGVDGITTEFPATASKYF  571 (671)
Q Consensus       549 ~~l~~~GVDgIiTD~P~~~~~~~  571 (671)
                      .++.++|||||+||+|++...|.
T Consensus       332 ~~~~~~GvDGvftD~p~~~~~~~  354 (356)
T cd08560         332 VLARDVGILGIFSDWPATVTYYA  354 (356)
T ss_pred             HHHHhcCCCEEEccCCCceeEec
Confidence            76568999999999999876554

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins

Probab=100.00  E-value=2.6e-45  Score=379.10  Aligned_cols=248  Identities=24%  Similarity=0.299  Sum_probs=197.2

Q ss_pred             eEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccc--cccc
Q 005894          271 LIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKE--RGIF  348 (671)
Q Consensus       271 ~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~--~G~~  348 (671)
                      +||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 +  +| .
T Consensus         2 ~iiaHRG~~~~~pENT~~af~~A~~~G~d~vE~DV~lTkDg~~Vv~HD~~l~r~t~-----------------~~~~g-~   63 (256)
T cd08601           2 AVIAHRGASGYAPEHTFAAYDLAREMGADYIELDLQMTKDGVLVAMHDETLDRTTN-----------------IERPG-P   63 (256)
T ss_pred             ceEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeECCCCeEEEeCCCccccccC-----------------CCCCc-e
Confidence            68999999999999999999999999999999999999999999999999999999                 5  67 7


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++++.+  .+|... ++..+++.+ .++++|||+|+|++++++  .+++||||.....     ..+++.++
T Consensus        64 v~~~t~~el~~l~~~--~~~~~~-~~~~~~~~~-~~~~iptL~evl~~~~~~--~~l~IEiK~~~~~-----~~~~~~v~  132 (256)
T cd08601          64 VKDYTLAEIKQLDAG--SWFNKA-YPEYARESY-SGLKVPTLEEVIERYGGR--ANYYIETKSPDLY-----PGMEEKLL  132 (256)
T ss_pred             eecCcHHHHHhcCCC--cccccc-Ccccccccc-CCccCCCHHHHHHHhccC--ceEEEEeeCCCCC-----CCHHHHHH
Confidence            999999999999986  444321 122233333 368999999999999875  5899999975321     25788999


Q ss_pred             HHHHhcCCCCCC--CceEEEEcCChHHHHHHhcC-CCceEEEEeecccC-CCChhHHHHHHHHHHHhcCCceeeecCCCc
Q 005894          429 KALSNATFDKQS--TQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVS-AAPREVVEEIKKYASAVTVTRTSVISTTES  504 (671)
Q Consensus       429 ~~l~~~~~~~~~--~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~-d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~  504 (671)
                      ++++++++..+.  .++++|+||++++|++++++ |+++++++++.... ......++.+..++.+       +.+..  
T Consensus       133 ~~l~~~~~~~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--  203 (256)
T cd08601         133 ATLDKYGLLTDNLKNGQVIIQSFSKESLKKLHQLNPNIPLVQLLWYGEGAETYDKWLDEIKEYAIG-------IGPSI--  203 (256)
T ss_pred             HHHHHcCCCcccCCCCCEEEecCCHHHHHHHHHhCCCCcEEEEeccCcccccchhHHHHHHhcCeE-------eCCch--
Confidence            999999876211  15999999999999999998 99999998754321 1112223333322222       22221  


Q ss_pred             ccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHH
Q 005894          505 FTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYF  571 (671)
Q Consensus       505 ~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~  571 (671)
                       ....+++++.+|++|+.|++||+|+.+             ++.+++ ++||||||||+|+.+.+++
T Consensus       204 -~~~~~~~v~~~~~~g~~v~~wTvn~~~-------------~~~~l~-~~Gvd~IiTD~p~~~~~~~  255 (256)
T cd08601         204 -ADADPWMVHLIHKKGLLVHPYTVNEKA-------------DMIRLI-NWGVDGMFTNYPDRLKEVL  255 (256)
T ss_pred             -hhcCHHHHHHHHHCCCEEEEEecCCHH-------------HHHHHH-hcCCCEEEeCCHHHHHHhh
Confidence             234578999999999999999999987             898885 9999999999999988765

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins

Probab=100.00  E-value=3.3e-46  Score=383.90  Aligned_cols=238  Identities=19%  Similarity=0.216  Sum_probs=183.2

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFS  349 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i  349 (671)
                      |+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+||                 ++| .|
T Consensus         1 p~viaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~lVv~HD~~l~R~t~-----------------~~g-~v   62 (263)
T cd08580           1 PLIVAHRGGTADAPENTLLAISKALANGADAIWLTVQLSKDGVPVLYRPSDLKSLTN-----------------GSG-AV   62 (263)
T ss_pred             CeEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEeEECCCCCEEEeCCCchhcccC-----------------CCC-Ch
Confidence            689999999999999999999999999999999999999999999999999999999                 788 89


Q ss_pred             ccCCHHHHhccCCCcCCCCCCCCCCCCCCcccc-cCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          350 FDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAK-NKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       350 ~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~-~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      .++||+||++|+++  .||...    .+.+ +. .+++||||+|+|+++++.   .++||||....      ..+++.|+
T Consensus        63 ~~~t~~el~~ld~g--~~~~~~----~~~~-~~~~~~~iPtL~evl~~~~~~---~l~iEiK~~~~------~~~~~~v~  126 (263)
T cd08580          63 SAYTAAQLATLNAG--YNFKPE----GGYP-YRGKPVGIPTLEQVLRAFPDT---PFILDMKSLPA------DPQAKAVA  126 (263)
T ss_pred             hhCcHHHHhcCCCc--cccccc----cCcc-cCCCCCcCccHHHHHHhhcCC---eEEEEECCCCc------HHHHHHHH
Confidence            99999999999987  444311    0111 21 246899999999999863   79999997532      15789999


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CC-------ceEEEEeecccCC---CCh-----------hHHHHHHH
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PA-------YKKVLHIRKEVSA---APR-----------EVVEEIKK  486 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~-------~~~~~l~~~~~~d---~~~-----------~~l~~i~~  486 (671)
                      ++|+++++.    ++|+|+|||++.|+++++. |+       +.++++.+.....   ...           ..+..+..
T Consensus       127 ~~i~~~~~~----~~v~v~SF~~~~l~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (263)
T cd08580         127 RVLERENAW----SRVRIYSTNADYQDALAPYPQARLFESRDVTRTRLANVAMAHQCDLPPDSGAWAGFELRRKVTVVET  202 (263)
T ss_pred             HHHHhcCCC----CCEEEEECCHHHHHHHHhcCcccccccHHHHHHHHHhhhcccccccCccchhhccccccccchheee
Confidence            999999987    7999999999999999999 84       3333332110000   000           00000001


Q ss_pred             HHHHhcCCceeeecCCCcccccchHHHHHHHHc-CCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChh
Q 005894          487 YASAVTVTRTSVISTTESFTTNATNILRDLHSA-NISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPA  565 (671)
Q Consensus       487 ~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~-Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~  565 (671)
                      +  +++.  ...++   .+...++++|+++|++ |+.|++||+|++.             +|++++ ++||||||||+|+
T Consensus       203 ~--~~~~--~~~~~---~~~l~t~~~V~~~h~~~gl~V~~WTVN~~~-------------~~~~l~-~~GVDgIiTD~P~  261 (263)
T cd08580         203 F--TLGE--GRSPV---QATLWTPAAVDCFRRNSKVKIVLFGINTAD-------------DYRLAK-CLGADAVMVDSPA  261 (263)
T ss_pred             e--cccc--ccccc---ccccCCHHHHHHHHhcCCcEEEEEEeCCHH-------------HHHHHH-HcCCCEEEeCCcc
Confidence            1  0111  11122   2345678999999999 9999999999998             899985 9999999999998


Q ss_pred             h
Q 005894          566 T  566 (671)
Q Consensus       566 ~  566 (671)
                      .
T Consensus       262 ~  262 (263)
T cd08580         262 A  262 (263)
T ss_pred             c
Confidence            5

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.

>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

Probab=100.00  E-value=6.2e-45  Score=369.42  Aligned_cols=228  Identities=18%  Similarity=0.217  Sum_probs=181.5

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 ++| .|.+
T Consensus         1 iiaHRG~~~~~PENTl~Af~~A~~~gad~iE~DV~lTkDg~~Vv~HD~~l~r~t~-----------------~~~-~v~~   62 (229)
T cd08581           1 LVAHRGYPARYPENTLVGFRAAVDAGARFVEFDVQLSADGVPVVFHDDTLLRLTG-----------------VEG-LLHE   62 (229)
T ss_pred             CEeCCCCCCCCCccHHHHHHHHHHcCCCEEEEeeeECCCCcEEEECCCccccccC-----------------CCc-eecc
Confidence            6899999999999999999999999999999999999999999999999999999                 677 8999


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKAL  431 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l  431 (671)
                      +||+||++|+.....||+.         .+ .+++||||+|+|+++++...++++||||.....    ...+.+.+.+++
T Consensus        63 ~t~~el~~l~~~~~~~~~~---------~~-~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~----~~~~~~~v~~~~  128 (229)
T cd08581          63 LEDAELDSLRVAEPARFGS---------RF-AGEPLPSLAAVVQWLAQHPQVTLFVEIKTESLD----RFGLERVVDKVL  128 (229)
T ss_pred             CCHHHHhhcccccCccccc---------cc-CCccCCCHHHHHHHHhhCCCceEEEEecCCccc----ccchhHHHHHHH
Confidence            9999999998765455542         23 358999999999999873235899999976432    123445566666


Q ss_pred             HhcC-CCCCCCceEEEEcCChHHHHHHhcCCCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccch
Q 005894          432 SNAT-FDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNAT  510 (671)
Q Consensus       432 ~~~~-~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~  510 (671)
                      ++++ +.    ++++|+|||+++|+++|++|.++++++.....    ...    ...+..+++  ..+++...  .   .
T Consensus       129 ~~~~~~~----~~~~i~SF~~~~l~~~r~~~~~~~~~l~~~~~----~~~----~~~~~~~~~--~~~~~~~~--~---~  189 (229)
T cd08581         129 RALPAVA----AQRVLISFDYDLLALAKQQGGPRTGWVLPDWD----DAS----LAEADELQP--DYLFCDKN--L---L  189 (229)
T ss_pred             HHHHhcc----CCeEEEeCCHHHHHHHHhcCCCCeEEEeccCC----hHH----HHHHHhhCC--CEEecccc--c---C
Confidence            6654 44    69999999999999999998899998874321    111    123444554  34444321  1   1


Q ss_pred             HHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894          511 NILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP  564 (671)
Q Consensus       511 ~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P  564 (671)
                      ..++++|++|++|++||+|++.             ++.+++ ++||||||||+|
T Consensus       190 ~~v~~~~~~G~~v~vWTVn~~~-------------~~~~l~-~~GVdgiiTD~P  229 (229)
T cd08581         190 PDTGDLWAGTWKWVIYEVNEPA-------------EALALA-ARGVALIETDNI  229 (229)
T ss_pred             hhhHHHHhCCceEEEEEcCCHH-------------HHHHHH-HhCCcEEEcCCC
Confidence            4588899999999999999998             899885 999999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional

Probab=100.00  E-value=2e-44  Score=370.60  Aligned_cols=237  Identities=16%  Similarity=0.170  Sum_probs=186.6

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|.+|||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|+                 ++| .
T Consensus         7 ~~~iiaHRG~~~~~pENT~~Af~~A~~~G~d~vE~DV~lT~Dg~lVV~HD~~l~R~t~-----------------~~~-~   68 (249)
T PRK09454          7 YPRIVAHRGGGKLAPENTLAAIDVGARYGHRMIEFDAKLSADGEIFLLHDDTLERTSN-----------------GWG-V   68 (249)
T ss_pred             CCeEEECCCCCCCCChHHHHHHHHHHHcCCCEEEEEeeECCCCCEEEECCCcccccCC-----------------CCC-c
Confidence            5799999999999999999999999999999999999999999999999999999999                 677 7


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++++.+  .+|+         +.+ .+++||||+|+|+++++.+ +.++||||......    ....+.+.
T Consensus        69 v~~~t~~el~~l~~~--~~~~---------~~~-~~~~iPtL~evl~~~~~~~-~~l~iEiK~~~~~~----~~~~~~v~  131 (249)
T PRK09454         69 AGELTWQDLAQLDAG--SWFS---------AAF-AGEPLPTLSQVAARCRAHG-MAANIEIKPTTGRE----AETGRVVA  131 (249)
T ss_pred             hhhCCHHHHHhcCCC--CccC---------CCC-CCCcCCCHHHHHHHHHhcC-CEEEEEECCCCCcc----hhHHHHHH
Confidence            999999999999987  3443         222 3578999999999997642 57999999643211    12333444


Q ss_pred             HHHHhc--CCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcc
Q 005894          429 KALSNA--TFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESF  505 (671)
Q Consensus       429 ~~l~~~--~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~  505 (671)
                      .+++.+  ++.    ++++++||++++|++++++ |.+++++++.....     ..   ...+...+.  ..+++.+   
T Consensus       132 ~~~~~~~~~~~----~~v~v~SF~~~~l~~l~~~~p~~~~~~l~~~~~~-----~~---~~~~~~~~~--~~~~~~~---  194 (249)
T PRK09454        132 LAARALWAGAA----VPPLLSSFSEDALEAARQAAPELPRGLLLDEWPD-----DW---LELTRRLGC--VSLHLNH---  194 (249)
T ss_pred             HHHHHHhcCCC----CCEEEEeCCHHHHHHHHHhCCCCcEEEEeccccc-----cH---HHHHHhcCC--eEEeccc---
Confidence            444443  333    5899999999999999999 99999998753211     11   112222222  3344432   


Q ss_pred             cccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHH
Q 005894          506 TTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYF  571 (671)
Q Consensus       506 ~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~  571 (671)
                      ...++++++++|++|++|++||+|++.             ++.+++ ++||||||||+|+.+..++
T Consensus       195 ~~~~~~~v~~~~~~g~~v~~WTvn~~~-------------~~~~l~-~~GVdgIiTD~p~~~~~~~  246 (249)
T PRK09454        195 KLLDEARVAALKAAGLRILVYTVNDPA-------------RARELL-RWGVDCICTDRIDLIGPDF  246 (249)
T ss_pred             ccCCHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-HcCCCEEEeCChHhcCccc
Confidence            344789999999999999999999997             888885 9999999999999877554

>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins

Probab=100.00  E-value=2e-44  Score=380.18  Aligned_cols=253  Identities=17%  Similarity=0.265  Sum_probs=192.1

Q ss_pred             CCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894          268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI  347 (671)
Q Consensus       268 ~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~  347 (671)
                      ..|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 ++| 
T Consensus        25 ~~~~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVV~HD~~l~Rtt~-----------------~~g-   86 (300)
T cd08612          25 FPCRHISHRGGSGENLENTMEAFEHAVKVGTDMLELDVHLTKDGQVVVSHDENLLRSCG-----------------VDK-   86 (300)
T ss_pred             CCCCEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeECcCCeEEEECCccccccCC-----------------CCc-
Confidence            47899999999999999999999999999999999999999999999999999999999                 778 


Q ss_pred             ccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHH
Q 005894          348 FSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAV  427 (671)
Q Consensus       348 ~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v  427 (671)
                      .|.++||+||++++.+....|+..   .++.+.+ .+++||||+|+|+++++   +.++||||....       .+++++
T Consensus        87 ~V~~~t~~eL~~l~~~~~~~~~~~---~~~~~~~-~g~~IPtL~EvL~~~~~---~~lnIEiK~~~~-------~~~~~v  152 (300)
T cd08612          87 LVSDLNYADLPPYLEKLEVTFSPG---DYCVPKG-SDRRIPLLEEVFEAFPD---TPINIDIKVEND-------ELIKKV  152 (300)
T ss_pred             ccccCCHHHHhhccccccccccCC---ccccccC-CCCCCCCHHHHHHhCCC---CeEEEEECCCch-------HHHHHH
Confidence            799999999999954321111100   1112233 36899999999999965   389999997531       478899


Q ss_pred             HHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccC--------CC-----ChhHHHH--HHHHHHHh
Q 005894          428 TKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVS--------AA-----PREVVEE--IKKYASAV  491 (671)
Q Consensus       428 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~--------d~-----~~~~l~~--i~~~a~~v  491 (671)
                      +++++++++.    ++++++|||+++|+++++. |+++++++++....        ..     ....+..  ........
T Consensus       153 ~~~i~~~~~~----~~v~isSF~~~~L~~~~~~~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (300)
T cd08612         153 SDLVRKYKRE----DITVWGSFNDEIVKKCHKENPNIPLFFSLKRVLLLLLLYYTGLLPFIPIKESFLEIPMPSIFLKTY  228 (300)
T ss_pred             HHHHHHcCCC----CcEEEEeCCHHHHHHHHHhCCCccEEechHHHHHHHHHHHcccCccccCccccccccchhhhhhhc
Confidence            9999999987    7999999999999999999 99999886532100        00     0000000  00000000


Q ss_pred             c------CCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChh
Q 005894          492 T------VTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPA  565 (671)
Q Consensus       492 ~------~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~  565 (671)
                      +      .....+++.  .+...++++|+++|++|+.|++||+|++.             +|.+++ ++||||||||+|+
T Consensus       229 ~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~G~~v~vWTVNd~~-------------~~~~l~-~~GVdgIiTD~P~  292 (300)
T cd08612         229 FPKSMSRLNRFVLFLI--DWLLMRPSLFRHLQKRGIQVYGWVLNDEE-------------EFERAF-ELGADGVMTDYPT  292 (300)
T ss_pred             ccccccccccceeccc--ccccCCHHHHHHHHHCCCEEEEeecCCHH-------------HHHHHH-hcCCCEEEeCCHH
Confidence            0      000111111  12345789999999999999999999998             899985 9999999999999


Q ss_pred             hHHHHHH
Q 005894          566 TASKYFR  572 (671)
Q Consensus       566 ~~~~~~~  572 (671)
                      .+.+++.
T Consensus       293 ~l~~~l~  299 (300)
T cd08612         293 KLREFLD  299 (300)
T ss_pred             HHHHHHh
Confidence            9988764

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.

>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins

Probab=100.00  E-value=6.2e-44  Score=362.67  Aligned_cols=228  Identities=22%  Similarity=0.252  Sum_probs=187.1

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 ++| .|.+
T Consensus         1 iiaHRG~~~~~pENT~~af~~A~~~gad~iE~Dv~~TkDg~lvv~HD~~l~r~t~-----------------~~~-~i~~   62 (229)
T cd08562           1 IIAHRGASSLAPENTLAAFRAAAELGVRWVEFDVKLSGDGTLVLIHDDTLDRTTN-----------------GSG-AVTE   62 (229)
T ss_pred             CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEEeECCCCCEEEEcCCCCccccC-----------------CCc-eeec
Confidence            6899999999999999999999999999999999999999999999999999999                 677 8999


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKAL  431 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l  431 (671)
                      +||+||++|+.+  .|++         +.+ .+++||||+|+|+++++.+ +.++||||.....    ...+++.|.+++
T Consensus        63 lt~~el~~l~~~--~~~~---------~~~-~~~~iptl~evl~~~~~~~-~~l~iEiK~~~~~----~~~~~~~v~~~l  125 (229)
T cd08562          63 LTWAELAQLDAG--SWFS---------PEF-AGEPIPTLADVLELARELG-LGLNLEIKPDPGD----EALTARVVAAAL  125 (229)
T ss_pred             CcHHHHhhcCCC--cccC---------CCC-CCCCCCCHHHHHHHHHhcC-CEEEEEECCCCCc----cHHHHHHHHHHH
Confidence            999999999976  3332         223 3579999999999998653 5799999975421    235778899999


Q ss_pred             HhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccch
Q 005894          432 SNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNAT  510 (671)
Q Consensus       432 ~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~  510 (671)
                      ++++...   ++++++||++++|+.+++. |+++++++......+        ...++...+.  ..+.+.+   ...++
T Consensus       126 ~~~~~~~---~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~--------~~~~~~~~~~--~~~~~~~---~~~~~  189 (229)
T cd08562         126 RELWPHA---SKLLLSSFSLEALRAARRAAPELPLGLLFDTLPAD--------WLELLAALGA--VSIHLNY---RGLTE  189 (229)
T ss_pred             HHhcCCc---CCEEEECCCHHHHHHHHHhCCCCcEEEEecCCCcC--------HHHHHHHcCC--eEEecCh---hhCCH
Confidence            9998742   6999999999999999999 999999987543211        1122333332  3344432   33467


Q ss_pred             HHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894          511 NILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP  564 (671)
Q Consensus       511 ~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P  564 (671)
                      ++|+.+|++|+.|++||+|++.             ++.+++ ++||||||||+|
T Consensus       190 ~~v~~~~~~g~~v~~wTvn~~~-------------~~~~~~-~~gVdgiiTD~p  229 (229)
T cd08562         190 EQVKALKDAGYKLLVYTVNDPA-------------RAAELL-EWGVDAIFTDRP  229 (229)
T ss_pred             HHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-HCCCCEEEcCCC
Confidence            8999999999999999999987             888885 999999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)

>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins

Probab=100.00  E-value=3.9e-44  Score=363.49  Aligned_cols=220  Identities=20%  Similarity=0.268  Sum_probs=179.8

Q ss_pred             eEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccccc
Q 005894          271 LIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSF  350 (671)
Q Consensus       271 ~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~  350 (671)
                      +||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 ++| .|.
T Consensus         1 ~iiaHRG~~~~~pENTl~af~~A~~~Gad~iE~DV~lT~Dg~~Vv~HD~~l~R~t~-----------------~~g-~v~   62 (226)
T cd08568           1 IILGHRGYRAKYPENTLEAFKKAIEYGADGVELDVWLTKDGKLVVLHDENLKRVGG-----------------VDL-KVK   62 (226)
T ss_pred             CEEeccCCCCCCCcchHHHHHHHHHcCcCEEEEEEEEcCCCCEEEECCCcccccCC-----------------CCc-eee
Confidence            48999999999999999999999999999999999999999999999999999999                 778 899


Q ss_pred             cCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHH
Q 005894          351 DLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKA  430 (671)
Q Consensus       351 dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~  430 (671)
                      ++||+||++++.+                    +++||||+|+|++++++  ..++||||..         ..++.++++
T Consensus        63 ~~t~~eL~~l~~~--------------------g~~iPtL~evl~~~~~~--~~l~iEiK~~---------~~~~~~~~~  111 (226)
T cd08568          63 ELTYKELKKLHPG--------------------GELIPTLEEVFRALPND--AIINVEIKDI---------DAVEPVLEI  111 (226)
T ss_pred             cCCHHHHhhCCCC--------------------CCcCCCHHHHHHhcCCC--cEEEEEECCc---------cHHHHHHHH
Confidence            9999999999874                    36899999999999875  4799999964         346789999


Q ss_pred             HHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCc----c
Q 005894          431 LSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTES----F  505 (671)
Q Consensus       431 l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~----~  505 (671)
                      ++++++.    ++++++||+++.|+++++. |.+++++++........      ...++...+.  ..+++....    .
T Consensus       112 l~~~~~~----~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~  179 (226)
T cd08568         112 VEKFNAL----DRVIFSSFNHDALRELRKLDPDAKVGLLIGEEEEGFS------IPELHEKLKL--YSLHVPIDAIGYIG  179 (226)
T ss_pred             HHHcCCC----CcEEEEECCHHHHHHHHHhCCCCcEEEEeeccccccC------HHHHHHhcCC--cEeccchhhhcccc
Confidence            9999987    7999999999999999999 99999999854311111      1112222221  222221100    0


Q ss_pred             cccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhh
Q 005894          506 TTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPAT  566 (671)
Q Consensus       506 ~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~  566 (671)
                      ...++++++++|++|+.|++||+|++.             +++++. .. |||||||+|+.
T Consensus       180 ~~~~~~~v~~~~~~G~~v~~WTvn~~~-------------~~~~l~-~~-vdgiiTD~p~~  225 (226)
T cd08568         180 FEKFVELLRLLRKLGLKIVLWTVNDPE-------------LVPKLK-GL-VDGVITDDVEK  225 (226)
T ss_pred             ccccHHHHHHHHHCCCEEEEEcCCCHH-------------HHHHHH-hh-CCEEEccCccc
Confidence            112478999999999999999999987             788773 65 99999999975

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.

>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins

Probab=100.00  E-value=1.1e-43  Score=361.14  Aligned_cols=229  Identities=25%  Similarity=0.395  Sum_probs=190.5

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFS  349 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i  349 (671)
                      ++||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|.|+|+                 ++| .|
T Consensus         1 ~~iiaHRG~~~~~pENT~~Af~~A~~~g~~~vE~DV~~TkDg~~Vv~HD~~l~r~t~-----------------~~~-~i   62 (230)
T cd08563           1 TLIFAHRGYSGTAPENTLLAFKKAIEAGADGIELDVHLTKDGQLVVIHDETVDRTTN-----------------GKG-YV   62 (230)
T ss_pred             CeEEEccCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCCcccccC-----------------CCC-ch
Confidence            479999999999999999999999999999999999999999999999999999999                 677 79


Q ss_pred             ccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHH
Q 005894          350 FDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTK  429 (671)
Q Consensus       350 ~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~  429 (671)
                      .++||+||++++.+  .+|+         +.+ .++++|||+|+|+++++.+ +.++||||......    ..+++.+.+
T Consensus        63 ~~~t~~el~~l~~~--~~~~---------~~~-~~~~iptL~evl~~~~~~~-~~l~leiK~~~~~~----~~~~~~l~~  125 (230)
T cd08563          63 KDLTLEELKKLDAG--SWFD---------EKF-TGEKIPTLEEVLDLLKDKD-LLLNIEIKTDVIHY----PGIEKKVLE  125 (230)
T ss_pred             hhCCHHHHHhcCCC--CccC---------ccC-CCCcCCCHHHHHHHHHhcC-cEEEEEECCCCCcC----hhHHHHHHH
Confidence            99999999999987  3332         122 3578999999999998642 57999999764321    257889999


Q ss_pred             HHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCccccc
Q 005894          430 ALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTN  508 (671)
Q Consensus       430 ~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~  508 (671)
                      +++++++.    ++++++||+++.++.+++. |++++++++.....        ....++...+.  ..+.+..   ...
T Consensus       126 ~l~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~--------~~~~~~~~~~~--~~v~~~~---~~~  188 (230)
T cd08563         126 LVKEYNLE----DRVIFSSFNHESLKRLKKLDPKIKLALLYETGLQ--------DPKDYAKKIGA--DSLHPDF---KLL  188 (230)
T ss_pred             HHHHcCCC----CCEEEEcCCHHHHHHHHHHCCCCcEEEEecCccc--------CHHHHHHHhCC--EEEccCc---hhc
Confidence            99999977    7999999999999999999 99999998754322        12334433332  3344432   334


Q ss_pred             chHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894          509 ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP  564 (671)
Q Consensus       509 ~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P  564 (671)
                      ++++++++|++|++|++||+|+..             ++.+++ ++||||||||+|
T Consensus       189 ~~~~i~~~~~~g~~v~~Wtvn~~~-------------~~~~~~-~~GVdgi~TD~P  230 (230)
T cd08563         189 TEEVVEELKKRGIPVRLWTVNEEE-------------DMKRLK-DLGVDGIITNYP  230 (230)
T ss_pred             CHHHHHHHHHCCCEEEEEecCCHH-------------HHHHHH-HCCCCEEeCCCC
Confidence            689999999999999999999987             899885 999999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.

>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins

Probab=100.00  E-value=1.1e-43  Score=365.39  Aligned_cols=244  Identities=21%  Similarity=0.305  Sum_probs=183.5

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+....++.+         ..| .
T Consensus         1 ~~~iiAHRG~~~~aPENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVV~HD~~l~Rtt~~~g~~~~~---------~~~-~   70 (252)
T cd08574           1 KPALIGHRGAPMLAPENTLMSFEKALEHGVYGLETDVTISYDGVPFLMHDRTLRRTTNVADVFPER---------AHE-R   70 (252)
T ss_pred             CCeEEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeEccCCcEEEeCCCcccccCCCCcccccc---------ccc-c
Confidence            478999999999999999999999999999999999999999999999999999999943322222         123 6


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCC-----CCCCC--cccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCC
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNP-----PIIRN--PEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGL  421 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~-----~~~r~--~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~  421 (671)
                      |.++||+||++|+++  .||+....     ...+.  ..+ .+++||||+|+|+++++.+ ..++||||...... ....
T Consensus        71 v~~~T~~eL~~ld~g--~~f~~~~~~~~~~~~~~~~~~~~-~~~~IPtL~evl~~~~~~~-~~l~iEiK~~~~~~-~~~~  145 (252)
T cd08574          71 ASMFTWTDLQQLNAG--QWFLKDDPFWTASSLSESDREEA-GNQSIPSLAELLRLAKKHN-KSVIFDLRRPPPNH-PYYQ  145 (252)
T ss_pred             hhcCCHHHHhhCCCC--CcccCCCccchhcccccchhhhc-CCCCCCCHHHHHHHHHHcC-CeEEEEecCCcccC-ccHH
Confidence            899999999999998  56642100     00000  122 3689999999999998643 47999999753100 0112


Q ss_pred             cHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeec
Q 005894          422 GVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVIS  500 (671)
Q Consensus       422 ~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~  500 (671)
                      .++++++++++++++.    .+++++||+.. ++.++++ |+++++++....        ...+    ...+.  ..+++
T Consensus       146 ~~~~~v~~~l~~~~~~----~~~v~~s~~~~-~~~~~~~~p~~~~~~~~~~~--------~~~~----~~~~~--~~~~~  206 (252)
T cd08574         146 SYVNITLDTILASGIP----QHQVFWLPDEY-RALVRKVAPGFQQVSGRKLP--------VESL----RENGI--SRLNL  206 (252)
T ss_pred             HHHHHHHHHHHHcCCC----cccEEEccHHH-HHHHHHHCCCCeEeeccccc--------hHHH----HhcCC--eEEcc
Confidence            5789999999999986    46666666654 7999999 999988643211        1111    12222  34555


Q ss_pred             CCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECC
Q 005894          501 TTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF  563 (671)
Q Consensus       501 ~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~  563 (671)
                      .+   ...++++|+.+|++|+.|++||||++.             ++.+++ ++||||||||-
T Consensus       207 ~~---~~~~~~~v~~~~~~g~~v~~WTVn~~~-------------~~~~l~-~~GVdgIiTD~  252 (252)
T cd08574         207 EY---SQLSAQEIREYSKANISVNLYVVNEPW-------------LYSLLW-CSGVQSVTTNA  252 (252)
T ss_pred             Cc---ccCCHHHHHHHHHCCCEEEEEccCCHH-------------HHHHHH-HcCCCEEecCc
Confidence            43   344679999999999999999999998             899885 99999999993

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo

>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins

Probab=100.00  E-value=2.9e-43  Score=365.49  Aligned_cols=252  Identities=19%  Similarity=0.197  Sum_probs=192.7

Q ss_pred             CCceEEeccCCCCC--CCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccc
Q 005894          268 DRPLIITHNGASGV--YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKER  345 (671)
Q Consensus       268 ~~p~iIAHRG~s~~--~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~  345 (671)
                      .+|+||||||+++.  +||||++||++|++.|||+||+|||+||||++||+||.++++++...   ..|.      .++.
T Consensus         2 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~~~~~~---~~~~------~~~~   72 (265)
T cd08564           2 VRPIIVGHRGAGCSTLYPENTLPSFRRALEIGVDGVELDVFLTKDNEIVVFHGTEDDTNPDTS---IQLD------DSGF   72 (265)
T ss_pred             CCceEEEeCCCCCCCCCCchhHHHHHHHHHcCCCEEEEeeEECCCCCEEEEcCCccccCcccc---cccc------CCCc
Confidence            36899999999988  99999999999999999999999999999999999998766522100   0000      0156


Q ss_pred             ccccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHH
Q 005894          346 GIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVD  425 (671)
Q Consensus       346 G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~  425 (671)
                      | .|.++|++||++++.+  .||+...    +......+++||||+|+|+++++.  ++++||||...       ..+++
T Consensus        73 ~-~v~~~t~~el~~l~~~--~~~~~~~----~~~~~~~~~~iptL~evl~~~~~~--~~l~iEiK~~~-------~~~~~  136 (265)
T cd08564          73 K-NINDLSLDEITRLHFK--QLFDEKP----CGADEIKGEKIPTLEDVLVTFKDK--LKYNIELKGRE-------VGLGE  136 (265)
T ss_pred             c-chhhCcHHHHhhcccC--cccccCc----ccccccCCccCCCHHHHHHHhccC--cEEEEEeCCCc-------hhHHH
Confidence            7 7999999999999987  3543211    111112458999999999999875  68999999653       25788


Q ss_pred             HHHHHHHhcCCCCCCCceEEEEcCCh-HHHHHHhcC-CC---ceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeec
Q 005894          426 AVTKALSNATFDKQSTQQVMIQSDDS-SVLSKFQDV-PA---YKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVIS  500 (671)
Q Consensus       426 ~v~~~l~~~~~~~~~~~~vii~Sfd~-~~L~~lk~~-p~---~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~  500 (671)
                      .++++|+++++.    ++++|+||++ ++++++++. |+   +++++++......    ...++...+...+.  ..+.+
T Consensus       137 ~v~~~l~~~~~~----~~v~i~SF~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~--~~v~~  206 (265)
T cd08564         137 RVLNLVEKYGMI----LQVHFSSFLHYDRLDLLKALRPNKLNVPIALLFNEVKSP----SPLDFLEQAKYYNA--TWVNF  206 (265)
T ss_pred             HHHHHHHHcCCC----CCEEEEecCchhHHHHHHHhCcCCCCceEEEEecCCCCc----ccccHHHHHHhcCC--ceeee
Confidence            999999999987    7999999999 999999999 88   9999998543210    11122223333333  23333


Q ss_pred             CCCcccccchHHHHHHHHcCCeEEEEe----ccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHH
Q 005894          501 TTESFTTNATNILRDLHSANISVYISA----LRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYF  571 (671)
Q Consensus       501 ~~~~~~~~~~~~V~~~~~~Gl~V~vwt----vn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~  571 (671)
                      ..   ...++++|+.+|++|+.|++||    +|+++             ++++++ ++||||||||+|+.+.+++
T Consensus       207 ~~---~~~~~~~v~~~~~~Gl~v~~wT~~~~~n~~~-------------~~~~l~-~~GvdgiiTD~p~~~~~~~  264 (265)
T cd08564         207 SY---DFWTEEFVKKAHENGLKVMTYFDEPVNDNEE-------------DYKVYL-ELGVDCICPNDPVLLVNFL  264 (265)
T ss_pred             ch---hhhhHHHHHHHHHcCCEEEEecCCCCCCCHH-------------HHHHHH-HcCCCEEEcCCHHHHHHhh
Confidence            32   2346789999999999999999    55554             788885 9999999999999999876

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins

Probab=100.00  E-value=1.4e-43  Score=360.87  Aligned_cols=234  Identities=18%  Similarity=0.247  Sum_probs=183.0

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 ++| .|.+
T Consensus         1 iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~~TkDg~~Vv~HD~~l~r~t~-----------------~~g-~v~~   62 (235)
T cd08565           1 IAGHRGGRNLWPENTLEGFRKALELGVDAVEFDVHLTADGEVVVIHDPTLDRTTH-----------------GTG-AVRD   62 (235)
T ss_pred             CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEeEEEccCCCEEEECCChhhcccC-----------------CCC-ceee
Confidence            6899999999999999999999999999999999999999999999999999999                 778 7999


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKAL  431 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l  431 (671)
                      +||+||++|+.+.  +|               +++||||+|+|+++++.+ +.++||||.....  .....+++++++++
T Consensus        63 ~t~~el~~l~~~~--~~---------------~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~--~~~~~~~~~v~~~i  122 (235)
T cd08565          63 LTLAERKALRLRD--SF---------------GEKIPTLEEVLALFAPSG-LELHVEIKTDADG--TPYPGAAALAAATL  122 (235)
T ss_pred             ccHHHHhcCCCCC--CC---------------CCCCCCHHHHHHHhhccC-cEEEEEECCCCCC--CccHHHHHHHHHHH
Confidence            9999999999862  21               478999999999997642 5799999965310  01125788999999


Q ss_pred             HhcCCCCCCCceEEEEcCChHHHHHHhcCCCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchH
Q 005894          432 SNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATN  511 (671)
Q Consensus       432 ~~~~~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~  511 (671)
                      +++++.    ++++|+||+++.|+++++.|+++++++++........ ..... ..+...+.....+++.   +...+..
T Consensus       123 ~~~~~~----~~v~~~Sf~~~~l~~~~~~p~~~~~~l~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~  193 (235)
T cd08565         123 RRHGLL----ERSVLTSFDPAVLTEVRKHPGVRTLGSVDEDMLERLG-GELPF-LTATALKAHIVAVEQS---LLAATWE  193 (235)
T ss_pred             HhCCCc----CCEEEEECCHHHHHHHHhCCCCcEEEEeccccccccc-cccch-hhhhhccCcEEccCcc---cccCCHH
Confidence            999987    7999999999999999988999999987532111000 00000 0111122111122221   1234578


Q ss_pred             HHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhH
Q 005894          512 ILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATA  567 (671)
Q Consensus       512 ~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~  567 (671)
                      +|+++| +|+.|++||+|++.             ++.+++ ++||||||||+|+.+
T Consensus       194 ~v~~~~-~g~~v~~WTVn~~~-------------~~~~l~-~~GVdgIiTD~P~~~  234 (235)
T cd08565         194 LVRAAV-PGLRLGVWTVNDDS-------------LIRYWL-ACGVRQLTTDRPDLA  234 (235)
T ss_pred             HHHHHh-CCCEEEEEccCCHH-------------HHHHHH-HcCCCEEEeCCcccc
Confidence            899987 49999999999987             899885 999999999999864

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins

Probab=100.00  E-value=2.4e-43  Score=370.87  Aligned_cols=254  Identities=18%  Similarity=0.229  Sum_probs=190.9

Q ss_pred             CCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894          268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI  347 (671)
Q Consensus       268 ~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~  347 (671)
                      .+|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+||....|+.+         ..| 
T Consensus        21 ~~~~IiAHRGa~~~aPENTl~AF~~A~~~Gad~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~~~~~~~---------~~~-   90 (316)
T cd08610          21 PKPTIIGHRGAPMLAPENTMMSFEKAIEHGAHGLETDVTLSYDGVPFLMHDFTLKRTTNIGEVQPES---------ACE-   90 (316)
T ss_pred             CCCeEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEEccCCCEEEeCCCccccccCCCCccccc---------ccc-
Confidence            4789999999999999999999999999999999999999999999999999999999954444444         234 


Q ss_pred             ccccCCHHHHhccCCCcCCCCCCCC-C----CCCCC--cccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcC
Q 005894          348 FSFDLTWTEIQSLKPQISSPFDKSN-P----PIIRN--PEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKG  420 (671)
Q Consensus       348 ~i~dlT~~EL~~L~~~~~~~f~~~~-~----~~~r~--~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~  420 (671)
                      .+.++||+||++++++  .||+... +    +.+..  ..+ .+++||||+|+|+++++.+ ..++||||....... ..
T Consensus        91 ~V~~~TlaEL~~ld~g--~wf~~~~~~~~~~~~~~~~~~~~-~~e~IPTLeEvL~~~~~~~-~~l~IEIK~~~~~~~-~~  165 (316)
T cd08610          91 NPAFFNWDFLSTLNAG--KWFVKPRPFYNMKPLSEADKERA-RNQSIPKLSNFLRLAEKEN-KLVIFDLYRPPPKHP-YR  165 (316)
T ss_pred             chhhCCHHHHhhCCCC--CccCccccccccccccccccccc-CCCCCCCHHHHHHHhHhcC-ceEEEEeCCCcccCc-ch
Confidence            6899999999999988  5664210 0    00000  112 3589999999999998743 479999996421100 01


Q ss_pred             CcHHHHHHHHH-HhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceee
Q 005894          421 LGVVDAVTKAL-SNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSV  498 (671)
Q Consensus       421 ~~~~~~v~~~l-~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v  498 (671)
                      ..+++.+++++ +++++.    +++++ ||+...++.+++. |++++++....        .+..+    ...+.  ..+
T Consensus       166 ~~~~~~v~~~i~~~~~~~----~~~v~-sf~~~~l~~~~~~~P~~~~~l~~~~--------~~~~l----~~~~~--~~l  226 (316)
T cd08610         166 HTWIRRVLEVILNEVGIE----QHLVL-WLPAHDRQYVQSVAPGFKQHVGRKV--------PIETL----LKNNI--SIL  226 (316)
T ss_pred             hHHHHHHHHHHHHHcCCC----CCEEE-EcCHHHHHHHHHHCcchhhhhcccc--------cHHHH----HHcCC--eEE
Confidence            13667787776 677887    56666 5889999999999 99876543211        11111    12222  345


Q ss_pred             ecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHH
Q 005894          499 ISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR  572 (671)
Q Consensus       499 ~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~  572 (671)
                      ++.+   ...++++|+++|++|++|++||+|++.             ++.+++ ++||||||||+|+.+.++.+
T Consensus       227 ~~~~---~~l~~~~v~~a~~~Gl~V~vWTVNd~~-------------~~~~l~-~~GVDgIiTD~P~~l~~~~~  283 (316)
T cd08610         227 NLAY---KKLFSNDIRDYKAANIHTNVYVINEPW-------------LFSLAW-CSGIHSVTTNNIHLLKQLDH  283 (316)
T ss_pred             ccch---hhCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-hCCcCEEEeCCHHHHHHhhc
Confidence            5543   344679999999999999999999997             898885 99999999999999977554

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.

>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

Probab=100.00  E-value=3.8e-43  Score=354.84  Aligned_cols=219  Identities=22%  Similarity=0.314  Sum_probs=183.5

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 ++| .|.+
T Consensus         1 iiaHRG~~~~~pENT~~af~~A~~~Gad~vE~DV~~T~Dg~~vv~HD~~l~r~t~-----------------~~~-~v~~   62 (220)
T cd08579           1 IIAHRGVSSNGVENTLEALEAAIKAKPDYVEIDVQETKDGQFVVMHDANLKRLAG-----------------VNK-KVWD   62 (220)
T ss_pred             CeeccCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEEcCCchhhccC-----------------CCC-Chhh
Confidence            6899999999999999999999999999999999999999999999999999999                 667 7999


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKAL  431 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l  431 (671)
                      +||+||++++.+.  ++              .+++||||+|+|+++++++ ++++||||....    ....+++.+++++
T Consensus        63 ~t~~el~~l~~~~--~~--------------~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~----~~~~~~~~v~~~l  121 (220)
T cd08579          63 LTLEELKKLTIGE--NG--------------HGAKIPSLDEYLALAKGLK-QKLLIELKPHGH----DSPDLVEKFVKLY  121 (220)
T ss_pred             CCHHHHhcCcCcc--CC--------------CCCcCCCHHHHHHHhhccC-CeEEEEECCCCC----CCHHHHHHHHHHH
Confidence            9999999999862  11              2478999999999998742 589999998642    2235788999999


Q ss_pred             HhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccch
Q 005894          432 SNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNAT  510 (671)
Q Consensus       432 ~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~  510 (671)
                      +++++.    ++++|+||+++.++.+++. |++++++++.....+.        .    ..++  ..+...   +...++
T Consensus       122 ~~~~~~----~~v~v~Sf~~~~l~~~~~~~p~~~~~~~~~~~~~~~--------~----~~~~--~~~~~~---~~~~~~  180 (220)
T cd08579         122 KQNLIE----NQHQVHSLDYRVIEKVKKLDPKIKTGYILPFNIGNL--------P----KTNV--DFYSIE---YSTLNK  180 (220)
T ss_pred             HHcCCC----cCeEEEeCCHHHHHHHHHHCCCCeEEEEEecccCcc--------c----ccCc--eEEeee---hhhcCH
Confidence            999987    6999999999999999998 9999999885433211        0    0111  112221   133467


Q ss_pred             HHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894          511 NILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP  564 (671)
Q Consensus       511 ~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P  564 (671)
                      ++++.+|++|++|++||+|++.             ++.+++ ++|||||+||+|
T Consensus       181 ~~v~~~~~~G~~v~~wtvn~~~-------------~~~~~~-~~Gvd~i~TD~P  220 (220)
T cd08579         181 EFIRQAHQNGKKVYVWTVNDPD-------------DMQRYL-AMGVDGIITDYP  220 (220)
T ss_pred             HHHHHHHHCCCEEEEEcCCCHH-------------HHHHHH-HcCCCEEeCCCC
Confidence            8999999999999999999987             888885 999999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.

>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins

Probab=100.00  E-value=7e-43  Score=371.03  Aligned_cols=252  Identities=21%  Similarity=0.270  Sum_probs=187.7

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+||||....++++..          ..
T Consensus         1 ~p~IIAHRGas~~aPENTL~AF~~A~~~GaD~IElDV~lTkDGvlVV~HD~tL~RtTn~~g~v~~~~~----------~~   70 (351)
T cd08608           1 KPAIIGHRGAPMLAPENTLMSFQKALEQKVYGLQADVTISLDGVPFLMHDRTLRRTTNVDRVFPERQY----------ED   70 (351)
T ss_pred             CCeEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCccccccCCCCccccccc----------cc
Confidence            57899999999999999999999999999999999999999999999999999999994332222211          13


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCC------C-C-cccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcC
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPII------R-N-PEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKG  420 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~------r-~-~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~  420 (671)
                      +.++||+||++|+++  .||.... |.+      + . ..+ .+++||||+|+|+++++.+ .+++||||.+.... ...
T Consensus        71 ~~~~TlaEL~~LdaG--~wf~~~~-p~~~~~~~~~~~~~~~-~ge~IPTL~EvL~~~~~~~-~~l~iEIK~~~~~~-~~~  144 (351)
T cd08608          71 ASMFNWTDLERLNAG--QWFLKDD-PFWTAQSLSPSDRKEA-GNQSVCSLAELLELAKRYN-ASVLLNLRRPPPNH-PYH  144 (351)
T ss_pred             cccCCHHHHhhCCCC--cccccCC-cccccccccccccccc-CCCCCCCHHHHHHHHHhcC-CeEEEEECCCcccC-cch
Confidence            578999999999998  3543110 000      0 0 122 3689999999999998743 46999999653110 011


Q ss_pred             CcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeee
Q 005894          421 LGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVI  499 (671)
Q Consensus       421 ~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~  499 (671)
                      ..+++.+++++.++++..   ++++++||+.  ++.+|+. |++++....        .....    .+...+.  ..++
T Consensus       145 ~~~~~~v~~~i~~~~~~~---~~vi~sSf~~--~~~vr~l~P~~~~~~~~--------~~~~~----~~~~~~~--~~l~  205 (351)
T cd08608         145 QSWINLTLKTILASGIPQ---EQVMWTPDWQ--RKLVRKVAPGFQQTSGE--------KLPVA----SLRERGI--TRLN  205 (351)
T ss_pred             hHHHHHHHHHHHHhCCCc---CeEEEEcchH--HHHHHHHCCCCeeeccc--------cchHH----HHHHcCC--eEEc
Confidence            256788899999998753   5888889876  4789998 998864211        01111    1222333  3455


Q ss_pred             cCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHH
Q 005894          500 STTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR  572 (671)
Q Consensus       500 ~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~  572 (671)
                      +..   ...++++|+++|++|++|++||||++.             ++.+++ ++||||||||+|+.+.+...
T Consensus       206 ~~~---~~lt~~~v~~~~~~Gl~V~vWTVN~~~-------------~~~~l~-~~GVdgIiTD~P~~l~~l~~  261 (351)
T cd08608         206 LRY---TQASAQEIRDYSASNLSVNLYTVNEPW-------------LYSLLW-CSGVPSVTSDASHVLRKVPF  261 (351)
T ss_pred             cch---hhcCHHHHHHHHHCCCEEEEEecCCHH-------------HHHHHH-HCCCCEEEECCHHHHHHhhh
Confidence            543   345689999999999999999999997             888885 99999999999999987653

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti

>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

Probab=100.00  E-value=1e-42  Score=354.75  Aligned_cols=230  Identities=22%  Similarity=0.321  Sum_probs=186.2

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 +.| .|.+
T Consensus         1 iiaHRG~~~~~pENTl~af~~A~~~G~~~vE~Dv~lTkDg~~Vv~HD~~l~r~t~-----------------~~~-~i~~   62 (233)
T cd08582           1 VIAHRGASAEAPENTLAAFELAWEQGADGIETDVRLTKDGELVCVHDPTLKRTSG-----------------GDG-AVSD   62 (233)
T ss_pred             CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEEEEccCCCEEEecCCccccccC-----------------CCc-chhh
Confidence            6899999999999999999999999999999999999999999999999999999                 677 7999


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKAL  431 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l  431 (671)
                      +||+||++++.+  .++.         ..+ .+++||||+|+|+++++.+ +.++||||...     .+..+++.+++++
T Consensus        63 ~t~~el~~l~~~--~~~~---------~~~-~~~~iptL~evl~~~~~~~-~~l~ieiK~~~-----~~~~~~~~~~~~~  124 (233)
T cd08582          63 LTLAELRKLDIG--SWKG---------ESY-KGEKVPTLEEYLAIVPKYG-KKLFIEIKHPR-----RGPEAEEELLKLL  124 (233)
T ss_pred             CCHHHHhcCCCC--cccC---------CCC-CCCcCCCHHHHHHHHHhcC-ceEEEEeCCCc-----cCccHHHHHHHHH
Confidence            999999999986  2222         122 3589999999999998843 58999999751     2236889999999


Q ss_pred             HhcC-CCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCccc-cc
Q 005894          432 SNAT-FDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFT-TN  508 (671)
Q Consensus       432 ~~~~-~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~-~~  508 (671)
                      ++++ ..    ++++++||++..++.+++. |+++++++..........      ..++.....  ..+.+..   . ..
T Consensus       125 ~~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~------~~~~~~~~~--~~i~~~~---~~~~  189 (233)
T cd08582         125 KESGLLP----EQIVIISFDAEALKRVRELAPTLETLWLRNYKSPKEDP------RPLAKSGGA--AGLDLSY---EKKL  189 (233)
T ss_pred             HHcCCCC----CCEEEEecCHHHHHHHHHHCCCCcEEEEeccCccccch------hHHHHhhCc--eEEcccc---cccC
Confidence            9995 44    6999999999999999999 999999987543211000      011122222  2233321   2 25


Q ss_pred             chHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhh
Q 005894          509 ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPAT  566 (671)
Q Consensus       509 ~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~  566 (671)
                      .+++++.+|++|++|++||+|+..             ++.+++ ++||||||||+|+.
T Consensus       190 ~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GVdgi~TD~p~~  233 (233)
T cd08582         190 NPAFIKALRDAGLKLNVWTVDDAE-------------DAKRLI-ELGVDSITTNRPGR  233 (233)
T ss_pred             CHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-HCCCCEEEcCCCCC
Confidence            679999999999999999999997             899985 99999999999973

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins

Probab=100.00  E-value=1.2e-42  Score=358.68  Aligned_cols=232  Identities=19%  Similarity=0.253  Sum_probs=184.2

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 ++| .|.+
T Consensus         1 iiaHRG~~~~~pENTl~af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~l~R~t~-----------------~~g-~v~~   62 (258)
T cd08573           1 IIGHRGAGHDAPENTLAAFRQAKKNGADGVEFDLEFTKDGVPVLMHDDTVDRTTD-----------------GTG-LVAE   62 (258)
T ss_pred             CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeECCCCcEEEECCCCcceecC-----------------CCc-eEec
Confidence            6899999999999999999999999999999999999999999999999999999                 678 7999


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKAL  431 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l  431 (671)
                      +||+||++|+.+...+++         +.+ .+++||||+|+|+++++.+ ..++||||....       .+++++++++
T Consensus        63 ~t~~el~~l~~~~~~~~~---------~~~-~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~-------~~~~~v~~~l  124 (258)
T cd08573          63 LTWEELRKLNAAAKHRLS---------SRF-PGEKIPTLEEAVKECLENN-LRMIFDVKSNSS-------KLVDALKNLF  124 (258)
T ss_pred             CcHHHHhhCCCCCCCCCc---------ccc-CCCCCCCHHHHHHHHHhcC-CEEEEEeCCCcH-------HHHHHHHHHH
Confidence            999999999987322111         122 3589999999999998643 479999997532       5778999999


Q ss_pred             HhcC-CCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCC-----hh----H-------HHHHHHH------
Q 005894          432 SNAT-FDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAP-----RE----V-------VEEIKKY------  487 (671)
Q Consensus       432 ~~~~-~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~-----~~----~-------l~~i~~~------  487 (671)
                      ++++ +.    ++++++||++.+|+++++. |+++++++++.......     ..    .       +..+..+      
T Consensus       125 ~~~~~~~----~~v~v~SF~~~~l~~~~~~~p~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (258)
T cd08573         125 KKYPGLY----DKAIVCSFNPIVIYKVRKADPKILTGLTWRPWFLSYTDDEGGPRRKSGWKHFLYSMLDVILEWSLHSWL  200 (258)
T ss_pred             HHCCCcc----CCEEEEECCHHHHHHHHHhCCCceEEEecCcchhcccccccCcccchHHHHHHHHHHHHHHHHHHHhhh
Confidence            9998 76    7999999999999999999 99999998753211000     00    0       0001111      


Q ss_pred             HHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhh-cCccEEEECC
Q 005894          488 ASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQG-VGVDGITTEF  563 (671)
Q Consensus       488 a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~-~GVDgIiTD~  563 (671)
                      +...++  ..+.+..   ...++++|+++|++|++|++||+|++.             ++++++ + +||| ||||+
T Consensus       201 ~~~~~~--~~v~~~~---~~~~~~~v~~~~~~G~~v~vWTVn~~~-------------~~~~l~-~~~GVd-iiTD~  257 (258)
T cd08573         201 PYFLGV--SALLIHK---DDISSAYVRYWRARGIRVIAWTVNTPT-------------EKQYFA-KTLNVP-YITDS  257 (258)
T ss_pred             hhhcCe--eEEEech---HhcCHHHHHHHHHCCCEEEEEecCCHH-------------HHHHHH-HHhCCC-eecCC
Confidence            011222  3444432   345789999999999999999999998             899885 8 9999 99997

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G

>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins

Probab=100.00  E-value=2.4e-42  Score=363.53  Aligned_cols=251  Identities=18%  Similarity=0.245  Sum_probs=187.6

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      .|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||....++.+.          ...
T Consensus        26 ~~~IIAHRGas~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~g~~~~~~----------~~~   95 (315)
T cd08609          26 KPALVGHRGAPMLAPENTLMSLRKSLECGVVVFETDVMVSKDGVPFLMHDEGLLRTTNVKDVFPGRD----------AAG   95 (315)
T ss_pred             CCeEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEeCCCcccccCCCCCCccccc----------ccc
Confidence            4789999999999999999999999999999999999999999999999999999999321111000          014


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCC-----C---cccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcC
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIR-----N---PEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKG  420 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r-----~---~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~  420 (671)
                      |.++||+||++|+++  .||+... +.++     +   ..+ .+++||||+|+|+++++.+ ..++||||...... ...
T Consensus        96 V~dlTlaEL~~ld~g--~wf~~~~-~~~~~~~~~~~~~~~~-~ge~IPTL~EvL~~~~~~~-~~l~IEIK~~~~~~-~~~  169 (315)
T cd08609          96 SNNFTWTELKTLNAG--SWFLERR-PFWTLSSLSEEDRREA-DNQTVPSLSELLDLAKKHN-VSIMFDLRNENNSH-VFY  169 (315)
T ss_pred             HhhCCHHHHhhCCCC--cccCccc-cccccccccccccccc-CCCCCCCHHHHHHHHHhcC-CEEEEEeCCCCCCC-ccH
Confidence            899999999999998  4554210 0000     0   012 3689999999999998743 46999999752100 011


Q ss_pred             CcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeee
Q 005894          421 LGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVI  499 (671)
Q Consensus       421 ~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~  499 (671)
                      ..+.+.++++++++++..   +++++  ++...++.+++. |++++++....        .   ..    ..+.  ..++
T Consensus       170 ~~f~~~vl~~i~~~~~~~---~~v~~--~~~~~l~~~~~~~P~~~~~~~~~~--------~---~~----~~~~--~~i~  227 (315)
T cd08609         170 SSFVFYTLETILKLGIPP---DKVWW--LPDEYRHDVMKMEPGFKQVYGRQK--------E---ML----MDGG--NFMN  227 (315)
T ss_pred             HHHHHHHHHHHHHcCCCc---ceEEE--eCHHHHHHHHHhCcCceeecccch--------h---hH----hcCC--eEEe
Confidence            257788999999998763   35543  468899999999 99998653210        0   00    0111  2344


Q ss_pred             cCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894          500 STTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK  574 (671)
Q Consensus       500 ~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~  574 (671)
                      +..   ...++++|+++|++|++|++||+|++.             ++++++ ++||||||||+|+.+.+.++..
T Consensus       228 ~~~---~~l~~~~v~~~~~~G~~v~vWTVNd~~-------------~~~~l~-~~GVDgIiTD~P~~l~~~~~~~  285 (315)
T cd08609         228 LPY---QDLSALEIKELRKDNVSVNLWVVNEPW-------------LFSLLW-CSGVSSVTTNACQLLKDMSKPI  285 (315)
T ss_pred             ccc---ccCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-hcCCCEEEcCCHHHHHHhhhhh
Confidence            432   334678999999999999999999997             899985 9999999999999999887654

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia

>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins

Probab=100.00  E-value=3e-43  Score=364.75  Aligned_cols=243  Identities=21%  Similarity=0.315  Sum_probs=184.3

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFS  349 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i  349 (671)
                      |+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 ++| .|
T Consensus         1 p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~-----------------~~~-~v   62 (264)
T cd08575           1 PLHIAHRGGAAEFPENTIAAFRHAVKNGADMLELDVQLTKDGQVVVFHDWDLDRLTG-----------------GSG-LV   62 (264)
T ss_pred             CeEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEEcCCcccceeC-----------------Cce-EE
Confidence            789999999999999999999999999999999999999999999999999999999                 677 89


Q ss_pred             ccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHH
Q 005894          350 FDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTK  429 (671)
Q Consensus       350 ~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~  429 (671)
                      .++|++||++++++.  +|..... ....+....+++||||+|+|+.+++   ..++||||....      ..+++.+++
T Consensus        63 ~~~t~~el~~l~~~~--~~~~~~~-~~~~~~~~~~~~iptL~evl~~~~~---~~l~iEiK~~~~------~~~~~~v~~  130 (264)
T cd08575          63 SDLTYAELPPLDAGY--GYTFDGG-KTGYPRGGGDGRIPTLEEVFKAFPD---TPINIDIKSPDA------EELIAAVLD  130 (264)
T ss_pred             ecCCHHHHHhcccCC--ccccCCC-CcccccCCCCCcCCcHHHHHHhCCC---CeEEEEECCCCH------HHHHHHHHH
Confidence            999999999999873  3321000 0001111235799999999999976   379999997542      257889999


Q ss_pred             HHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeeccc---------CCCChhHHHHHHHHHHHhcCCc----
Q 005894          430 ALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEV---------SAAPREVVEEIKKYASAVTVTR----  495 (671)
Q Consensus       430 ~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~---------~d~~~~~l~~i~~~a~~v~~~~----  495 (671)
                      +++++++.    ++++++||++++|+++++. |+++++++.....         ........   +..+-.+.+..    
T Consensus       131 ~i~~~~~~----~~~~~~Sf~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  203 (264)
T cd08575         131 LLEKYKRE----DRTVWGSTNPEYLRALHPENPNLFESFSMTRCLLLYLALGYTGLLPFVPI---KESFFEIPRPVIVLE  203 (264)
T ss_pred             HHHhcccc----ceEEEEeCCHHHHHHHHHhCcccccccCchhHHHHHHHhheeccCCCCCC---CceEEEeecccEEEE
Confidence            99999987    7999999999999999999 9877665542110         00000000   00000000000    


Q ss_pred             ------eeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhh
Q 005894          496 ------TSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPAT  566 (671)
Q Consensus       496 ------~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~  566 (671)
                            ..+.+   .+...++++|+++|++|++|++||+|++.             +|.+++ ++||||||||+|+.
T Consensus       204 ~~~~~~~~~~~---~~~~~~~~~v~~~~~~G~~v~vWTVNd~~-------------~~~~l~-~~GVdgIiTD~P~~  263 (264)
T cd08575         204 TFTLGEGASIV---AALLWWPNLFDHLRKRGIQVYLWVLNDEE-------------DFEEAF-DLGADGVMTDSPTK  263 (264)
T ss_pred             Eeccccccchh---hhhhcCHHHHHHHHhcCCcEEEEEECCHH-------------HHHHHH-hcCCCEEEeCCccc
Confidence                  00111   12345789999999999999999999998             899885 99999999999985

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.

>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins

Probab=100.00  E-value=3.7e-42  Score=361.20  Aligned_cols=257  Identities=14%  Similarity=0.158  Sum_probs=192.5

Q ss_pred             ceEEeccCCCCCCC--------chhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccc
Q 005894          270 PLIITHNGASGVYA--------GCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEI  341 (671)
Q Consensus       270 p~iIAHRG~s~~~P--------ENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~  341 (671)
                      ++||||||+++.+|        |||++||+.|++.|||+||+|||+||||++||+||.+|+|+ +               
T Consensus         2 ~~iiaHRG~~~~~p~~~~~~~pENTl~af~~A~~~g~d~vE~DV~lTkDg~~VV~HD~~l~rt-~---------------   65 (286)
T cd08606           2 VQVIGHRGLGKNTAERKSLQLGENTVESFILAASLGASYVEVDVQLTKDLVPVIYHDFLVSET-G---------------   65 (286)
T ss_pred             ceEEEeCCCCCCcccccccCcCcchHHHHHHHHHcCCCEEEEEEEEccCCEEEEeCCCeeccC-C---------------
Confidence            68999999999999        99999999999999999999999999999999999999985 5               


Q ss_pred             ccccccccccCCHHHHhccCCCcC-CCCCCCCCCCCCCccccc---CCcccCHHHHHHHHhccCcccEEEEecCchhhhh
Q 005894          342 QKERGIFSFDLTWTEIQSLKPQIS-SPFDKSNPPIIRNPEAKN---KGKFVTLDGFLEFAKTKAVSGVLININNAAYLAS  417 (671)
Q Consensus       342 ~~~~G~~i~dlT~~EL~~L~~~~~-~~f~~~~~~~~r~~~~~~---~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~  417 (671)
                        ++| .|.++||+||++|+.... .+|...   .++ ..+.+   +++||||+|+|+.++..  ++++||||.+.....
T Consensus        66 --~~~-~v~~lt~~eL~~ld~~~~~~~~~~~---~~~-~~~~g~~~~~~iptL~evl~~~~~~--~~l~IEiK~~~~~~~  136 (286)
T cd08606          66 --TDV-PIHDLTLEQFLHLSRMKYTVDFKKK---GFK-GNSRGHSIQAPFTTLEELLKKLPKS--VGFNIELKYPMLHEA  136 (286)
T ss_pred             --CCC-ccccCCHHHHHhhhccccccccccc---CCC-CcccccccccCCCcHHHHHHhCCCc--cceEEEEecCCcchh
Confidence              566 799999999999974311 111100   000 00111   24699999999999764  589999997542110


Q ss_pred             hc---------CCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCC---CChhHHHHH
Q 005894          418 KK---------GLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSA---APREVVEEI  484 (671)
Q Consensus       418 ~~---------~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d---~~~~~l~~i  484 (671)
                      ..         ...+++.++++++++++.    ++++|+||++++|+.++++ |.+++++++......   .....+...
T Consensus       137 ~~~~~~~~~~~~~~~~~~v~~~i~~~~~~----~~vi~sSF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~  212 (286)
T cd08606         137 EEEEVAPVAIELNAFVDTVLEKVFDYGAG----RNIIFSSFTPDICILLSLKQPGYPVLFLTEAGKAPDMDVRAASLQEA  212 (286)
T ss_pred             hhcccccchhHHHHHHHHHHHHHHhcCCC----CceEEEcCCHHHHHHHHhhCcCCCEEEEeCCCCCccCCchhhcHHHH
Confidence            00         014667899999999987    7999999999999999999 999999997542211   111122223


Q ss_pred             HHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEec--cCcccccccccCCChHHHHHHHHhhcCccEEEEC
Q 005894          485 KKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISAL--RNEYLSIAFDYLADPLIEVATFAQGVGVDGITTE  562 (671)
Q Consensus       485 ~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv--n~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD  562 (671)
                      ..++...+.  ..+.+.. .+...++.+|+.+|++|+.|++||+  |++.             ++.+++ ++||||||||
T Consensus       213 ~~~~~~~~~--~~~~~~~-~~~~~~~~~v~~~~~~Gl~v~~WTv~~n~~~-------------~~~~l~-~~GVdgIiTD  275 (286)
T cd08606         213 IRFAKQWNL--LGLVSAA-EPLVMCPRLIQVVKRSGLVCVSYGVLNNDPE-------------NAKTQV-KAGVDAVIVD  275 (286)
T ss_pred             HHHHHHCCC--eEEEech-HHhhhChHHHHHHHHCCcEEEEECCccCCHH-------------HHHHHH-HcCCCEEEEC
Confidence            345555544  2232211 1234467999999999999999999  7776             788885 9999999999


Q ss_pred             ChhhHHHHHH
Q 005894          563 FPATASKYFR  572 (671)
Q Consensus       563 ~P~~~~~~~~  572 (671)
                      +|+.+.+.+.
T Consensus       276 ~p~~~~~~~~  285 (286)
T cd08606         276 SVLAIRRGLT  285 (286)
T ss_pred             CHHHHHHHhc
Confidence            9999988753

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp

>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins

Probab=100.00  E-value=3e-42  Score=361.85  Aligned_cols=263  Identities=17%  Similarity=0.189  Sum_probs=193.6

Q ss_pred             eEEeccCCC--------CCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccc
Q 005894          271 LIITHNGAS--------GVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQ  342 (671)
Q Consensus       271 ~iIAHRG~s--------~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~  342 (671)
                      +||||||++        +.+||||++||+.|++.|||+||+|||+||||++||+||.+|+|+|+.++.+        ...
T Consensus         1 ~viaHRG~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDG~lVv~HD~~l~r~~~~~~~~--------~~~   72 (293)
T cd08572           1 LVIGHRGLGKNYASGSLAGIRENTIASFLAAAKHGADMVEFDVQLTKDGVPVIYHDFTISVSEKSKTGS--------DEG   72 (293)
T ss_pred             CceEecCCCCCcCcccccCcCcccHHHHHHHHHcCCCEEEEEEEEccCCeEEEEcCCcceeeccccccc--------ccC
Confidence            589999997        7999999999999999999999999999999999999999999999843321        111


Q ss_pred             cccccccccCCHHHHhccCCCcCCC-CCCCC---CCCCCCc--ccccCCcccCHHHHHHHHhccCcccEEEEecCchhhh
Q 005894          343 KERGIFSFDLTWTEIQSLKPQISSP-FDKSN---PPIIRNP--EAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLA  416 (671)
Q Consensus       343 ~~~G~~i~dlT~~EL~~L~~~~~~~-f~~~~---~~~~r~~--~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~  416 (671)
                      .+.+..|.++||+||++|+.+.... +....   ....+.+  ....+++||||+|+|+++++.  .+++||||.+....
T Consensus        73 ~g~~~~v~~lT~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iptL~evL~~~~~~--~~l~IEiK~~~~~~  150 (293)
T cd08572          73 ELIEVPIHDLTLEQLKELGLQHISALKRKALTRKAKGPKPNPWGMDEHDPFPTLQEVLEQVPKD--LGFNIEIKYPQLLE  150 (293)
T ss_pred             cceeeehhhCcHHHHHhccccccccccccccccccccCCccccchhhccCCCCHHHHHHhCCCc--cceEEEEecCCccc
Confidence            1333489999999999999873211 11000   0000000  011357899999999999864  58999999754321


Q ss_pred             hh--------cCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccC-----CCChhHHH
Q 005894          417 SK--------KGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVS-----AAPREVVE  482 (671)
Q Consensus       417 ~~--------~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~-----d~~~~~l~  482 (671)
                      ..        ....+++.++++++++++.    ++|+++||++++|+.+++. |.+++++++.....     +.....+.
T Consensus       151 ~~~~~~~~~~~~~~~~~~vl~~i~~~~~~----~~vv~~SF~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~  226 (293)
T cd08572         151 DGEGELTPYFERNAFVDTILAVVFEHAGG----RRIIFSSFDPDICIMLRLKQNKYPVLFLTNGGTNEVEHMDPRRRSLQ  226 (293)
T ss_pred             cccccccchHHHHHHHHHHHHHHHHhCCC----CcEEEECCCHHHHHHHHhhCccCCEEEEecCCCCcccccchhhhhHH
Confidence            00        0124788999999999987    7999999999999999999 99999999864322     11122344


Q ss_pred             HHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEec--cCcccccccccCCChHHHHHHHHhhcCccEEE
Q 005894          483 EIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISAL--RNEYLSIAFDYLADPLIEVATFAQGVGVDGIT  560 (671)
Q Consensus       483 ~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv--n~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIi  560 (671)
                      .+.+++...+..  .+.+.. .+...++++|+.+|++|+.|++||+  |++.             ++.++ .++||||||
T Consensus       227 ~~~~~~~~~~~~--~~~~~~-~~~~~~~~~v~~~~~~Gl~v~~wTv~~n~~~-------------~~~~l-~~~GVdgIi  289 (293)
T cd08572         227 AAVNFALAEGLL--GVVLHA-EDLLKNPSLISLVKALGLVLFTYGDDNNDPE-------------NVKKQ-KELGVDGVI  289 (293)
T ss_pred             HHHHHHHHCCCe--EEEech-HHhhcCcHHHHHHHHcCcEEEEECCCCCCHH-------------HHHHH-HHcCCCEEE
Confidence            455666555542  233322 1233467999999999999999999  6655             77777 599999999


Q ss_pred             ECCh
Q 005894          561 TEFP  564 (671)
Q Consensus       561 TD~P  564 (671)
                      ||+|
T Consensus       290 TD~~  293 (293)
T cd08572         290 YDRV  293 (293)
T ss_pred             ecCC
Confidence            9986

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins

Probab=100.00  E-value=4.6e-42  Score=356.23  Aligned_cols=253  Identities=21%  Similarity=0.253  Sum_probs=188.6

Q ss_pred             eEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCc--ccccccccccccccccccccc
Q 005894          271 LIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTA--ATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       271 ~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~--~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      .||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+.  ...|..         ...| .
T Consensus         2 ~iiaHRG~~~~~pENT~~Af~~A~~~Gad~vE~DV~~TkDg~~Vv~HD~~l~r~~~r~~~~~~~~---------~~~~-~   71 (263)
T cd08567           2 DLQGHRGARGLLPENTLPAFAKALDLGVDTLELDLVLTKDGVIVVSHDPKLNPDITRDPDGAWLP---------YEGP-A   71 (263)
T ss_pred             ceEeccCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEcCCCCEEEeCCCccCcceeecCCCCccc---------ccCc-c
Confidence            589999999999999999999999999999999999999999999999999987631  000000         0125 8


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCccc--ccCCcccCHHHHHHHHhccC--cccEEEEecCchhhhh--hcCCc
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEA--KNKGKFVTLDGFLEFAKTKA--VSGVLININNAAYLAS--KKGLG  422 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~--~~~~~ipTLeEvL~~~~~~~--~~~i~IeIK~~~~~~~--~~~~~  422 (671)
                      |+++||+||++|+.+.  ++..... ..+.+..  ..+++||||+|+|+++++.+  .++++||||.......  ..+..
T Consensus        72 v~~~t~~el~~l~~~~--~~~~~~~-~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~  148 (263)
T cd08567          72 LYELTLAEIKQLDVGE--KRPGSDY-AKLFPEQIPVPGTRIPTLEEVFALVEKYGNQKVRFNIETKSDPDRDILHPPPEE  148 (263)
T ss_pred             hhcCCHHHHHhcCCCc--cccCcCc-ccCCCccccCccccCCCHHHHHHHHHHhccCCceEEEEEcCCCCccccCccHHH
Confidence            9999999999999873  2210000 0011110  12478999999999998741  2589999997542100  01235


Q ss_pred             HHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecC
Q 005894          423 VVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVIST  501 (671)
Q Consensus       423 ~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~  501 (671)
                      +++.++++++++++.    ++|+|+||+++.++.++++ |++++++++.....    ..   +...+...++  ..+.+.
T Consensus       149 ~~~~v~~~l~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~----~~---~~~~~~~~~~--~~~~~~  215 (263)
T cd08567         149 FVDAVLAVIRKAGLE----DRVVLQSFDWRTLQEVRRLAPDIPTVALTEETTL----GN---LPRAAKKLGA--DIWSPY  215 (263)
T ss_pred             HHHHHHHHHHHcCCC----CceEEEeCCHHHHHHHHHHCCCccEEEEecCCcc----cC---HHHHHHHhCC--cEEecc
Confidence            789999999999987    7999999999999999999 99999998854320    01   1122233333  334433


Q ss_pred             CCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhh
Q 005894          502 TESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPAT  566 (671)
Q Consensus       502 ~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~  566 (671)
                      .   ...++++++++|++|+.|++||+|+..             ++.+++ ++||||||||+|+.
T Consensus       216 ~---~~~~~~~i~~~~~~G~~v~vwtvn~~~-------------~~~~~~-~~Gvdgi~TD~P~~  263 (263)
T cd08567         216 F---TLVTKELVDEAHALGLKVVPWTVNDPE-------------DMARLI-DLGVDGIITDYPDL  263 (263)
T ss_pred             h---hhcCHHHHHHHHHCCCEEEEecCCCHH-------------HHHHHH-HcCCCEEEcCCCCC
Confidence            2   345679999999999999999999886             788875 99999999999973

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5

Probab=100.00  E-value=5.5e-42  Score=359.15  Aligned_cols=252  Identities=17%  Similarity=0.185  Sum_probs=186.3

Q ss_pred             EEeccCCCC-----------CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccc
Q 005894          272 IITHNGASG-----------VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPE  340 (671)
Q Consensus       272 iIAHRG~s~-----------~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~  340 (671)
                      ||||||+..           .+||||++||++|++.|||+||+|||+||||++||+||.+|+|+++..            
T Consensus         2 ~ighrg~~~~~~~~~~~~~~~~~ENTl~Af~~A~~~Gad~vE~DV~lTkDg~~VV~HD~~l~r~~~g~------------   69 (282)
T cd08605           2 VIGHRGLGMNRASHQPSVGPGIRENTIASFIAASKFGADFVEFDVQVTRDGVPVIWHDDFIVVERGGE------------   69 (282)
T ss_pred             eEeccCCCcCcccccccccCCCCCcHHHHHHHHHHcCCCEEEEEEEECcCCeEEEECCCceecccCCC------------
Confidence            799999764           356999999999999999999999999999999999999999998810            


Q ss_pred             cccccccccccCCHHHHhccCCCcCCC---------CCCCCCCCCCCcc-cccCCcccCHHHHHHHHhccCcccEEEEec
Q 005894          341 IQKERGIFSFDLTWTEIQSLKPQISSP---------FDKSNPPIIRNPE-AKNKGKFVTLDGFLEFAKTKAVSGVLININ  410 (671)
Q Consensus       341 ~~~~~G~~i~dlT~~EL~~L~~~~~~~---------f~~~~~~~~r~~~-~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK  410 (671)
                        ...| .|.++||+||++|+++....         |....   ...+. ...+++||||+|+|+++++.  ++++||||
T Consensus        70 --~~~~-~V~dlT~~EL~~ld~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~iPtL~evl~~~~~~--~~l~IEiK  141 (282)
T cd08605          70 --VESS-RIRDLTLAELKALGPQAESTKTSTVALYRKAKDP---EPEPWIMDVEDSIPTLEEVFSEVPPS--LGFNIELK  141 (282)
T ss_pred             --cCcc-chhhCcHHHHHhccccccccccCcchhhcccccc---ccccccccccCCCCCHHHHHHhCCCC--ccEEEEEe
Confidence              0156 79999999999999873221         11000   00000 01257999999999999764  58999999


Q ss_pred             Cchhhhh--hcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeeccc---CCCChhHHHHH
Q 005894          411 NAAYLAS--KKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEV---SAAPREVVEEI  484 (671)
Q Consensus       411 ~~~~~~~--~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~---~d~~~~~l~~i  484 (671)
                      .+.....  ..-..++++++++++++++.    ++|+|+|||+++|+.++++ |.+++++++....   .+.....+...
T Consensus       142 ~~~~~~~~~~~~~~~~~~v~~~i~~~~~~----~~viisSF~~~~l~~l~~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~  217 (282)
T cd08605         142 FGDDNKTEAEELVRELRAILAVCKQHAPG----RRIMFSSFDPDAAVLLRALQSLYPVMFLTDCGPYTHNDPRRNSIEAA  217 (282)
T ss_pred             cCccccchHHHHHHHHHHHHHHHHhcCCC----CeEEEEeCCHHHHHHHHhcCccCCEEEEecCCCccccCchhhhHHHH
Confidence            6532100  00012357788889999887    7999999999999999999 9999999985432   12112223333


Q ss_pred             HHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEec--cCcccccccccCCChHHHHHHHHhhcCccEEEEC
Q 005894          485 KKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISAL--RNEYLSIAFDYLADPLIEVATFAQGVGVDGITTE  562 (671)
Q Consensus       485 ~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv--n~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD  562 (671)
                      ..++..++.  ..+++.. .++..++++|+++|++|+.|++||+  |++.             +|.+++ ++||||||||
T Consensus       218 ~~~~~~~~~--~~~~~~~-~~l~~~~~~v~~~~~~Gl~v~vWTv~~n~~~-------------~~~~l~-~~GVdgIiTD  280 (282)
T cd08605         218 IQVALEGGL--QGIVSEV-KVLLRNPTAVSLVKASGLELGTYGKLNNDAE-------------AVERQA-DLGVDGVIVD  280 (282)
T ss_pred             HHHHHHcCC--ceEEecH-HHhhcCcHHHHHHHHcCcEEEEeCCCCCCHH-------------HHHHHH-HcCCCEEEeC
Confidence            445555544  3344432 1123468999999999999999999  8876             888885 9999999999


Q ss_pred             Ch
Q 005894          563 FP  564 (671)
Q Consensus       563 ~P  564 (671)
                      ++
T Consensus       281 ~~  282 (282)
T cd08605         281 HV  282 (282)
T ss_pred             CC
Confidence            86

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.

>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins

Probab=100.00  E-value=5.5e-42  Score=360.69  Aligned_cols=263  Identities=17%  Similarity=0.153  Sum_probs=187.9

Q ss_pred             eEEeccCCC-------CCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccc
Q 005894          271 LIITHNGAS-------GVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQK  343 (671)
Q Consensus       271 ~iIAHRG~s-------~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~  343 (671)
                      +.|||||++       +.+||||++||+.|++.|||+||||||+||||++||+||.+|+|+|+.....+        ...
T Consensus         1 ~~iaHRG~~~~~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkDg~~VV~HD~~l~r~~~~~~~~~--------~~~   72 (290)
T cd08607           1 LDVGHRGAGNSYTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKDLVPVVYHDFTLRVSLKSKGDSD--------RDD   72 (290)
T ss_pred             CceecCCCCcCcccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccCCeEEEEcCCeeEeeccCccccC--------ccc
Confidence            478999994       89999999999999999999999999999999999999999999988321100        000


Q ss_pred             ccccccccCCHHHHhccCCCcC-CCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhh----
Q 005894          344 ERGIFSFDLTWTEIQSLKPQIS-SPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASK----  418 (671)
Q Consensus       344 ~~G~~i~dlT~~EL~~L~~~~~-~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~----  418 (671)
                      +.+..|.++||+||++|+++.. .||+.......++.....+++||||+|+|+++++.  ++++||||.+......    
T Consensus        73 ~~~~~v~~lt~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~--~~lnIEiK~~~~~~~~~~~~  150 (290)
T cd08607          73 LLEVPVKDLTYEQLKLLKLFHISALKVKEYKSVEEDEDPPEHQPFPTLSDVLESVPED--VGFNIEIKWPQQQKDGSWES  150 (290)
T ss_pred             eEEEecccCCHHHHhhcCcccccccccccccccccccccccccCCCCHHHHHHhCCCc--cceEEEEecCcccccccccc
Confidence            1123799999999999998632 22321100000111111257899999999999874  6899999975321100    


Q ss_pred             ------cCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccC------CCChhHHHHHH
Q 005894          419 ------KGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVS------AAPREVVEEIK  485 (671)
Q Consensus       419 ------~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~------d~~~~~l~~i~  485 (671)
                            ....+++.+++++.+++..    ++|+|+||++++|..++++ |.+++++++.....      +.....+....
T Consensus       151 ~~~~~~~~~~~~~~v~~~i~~~~~~----~~v~isSF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  226 (290)
T cd08607         151 ELFTYFDRNLFVDIILKIVLEHAGK----RRIIFSSFDADICTMLRFKQNKYPVLFLTQGKTQRYPEFMDLRTRTFEIAV  226 (290)
T ss_pred             ccccccchhHHHHHHHHHHHHhCCC----CCEEEEcCCHHHHHHHHHhCcCCCEEEEecCCCCccccccchHHHhHHHHH
Confidence                  0013678899999988876    6999999999999999999 99999998754311      11111122233


Q ss_pred             HHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEec--cCcccccccccCCChHHHHHHHHhhcCccEEEECC
Q 005894          486 KYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISAL--RNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF  563 (671)
Q Consensus       486 ~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv--n~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~  563 (671)
                      .++...+.....+.+   .+...++++|+.+|++|+.|++||+  |+++             ++.++ .++||||||||+
T Consensus       227 ~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~Gl~v~~wTv~~n~~~-------------~~~~l-~~~GVdgIiTD~  289 (290)
T cd08607         227 NFAQAEELLGVNLHS---EDLLKDPSQIELAKSLGLVVFCWGDDLNDPE-------------NRKKL-KELGVDGLIYDR  289 (290)
T ss_pred             HHHHHcCCceeEech---hhhhcChHHHHHHHHcCCEEEEECCCCCCHH-------------HHHHH-HHcCCCEEEecC
Confidence            444444332112222   2244578999999999999999999  7776             78887 599999999998


Q ss_pred             h
Q 005894          564 P  564 (671)
Q Consensus       564 P  564 (671)
                      +
T Consensus       290 ~  290 (290)
T cd08607         290 I  290 (290)
T ss_pred             C
Confidence            5

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.

>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins

Probab=100.00  E-value=4.3e-42  Score=350.34  Aligned_cols=229  Identities=20%  Similarity=0.266  Sum_probs=178.4

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccc-ccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKER-GIFSF  350 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~-G~~i~  350 (671)
                      ||||||+++.+||||++||+.|++.|+|+||||||+||||++||+||.+++|+|+                 ++ | .|.
T Consensus         1 iiAHRG~~~~~pENT~~af~~a~~~g~d~vE~Dv~lTkDg~~vv~HD~~l~R~t~-----------------~~~~-~v~   62 (234)
T cd08570           1 VIGHRGYKAKYPENTLLAFEKAVEAGADAIETDVHLTKDGVVVISHDPNLKRCFG-----------------KDGL-IID   62 (234)
T ss_pred             CEeCCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeEccCCcEEEeCCCccceeeC-----------------CCCC-Eec
Confidence            6899999999999999999999999999999999999999999999999999999                 66 5 899


Q ss_pred             cCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhcc--CcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          351 DLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTK--AVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       351 dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~--~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      ++||+||++|+.+.                 .+.+++|||+|+|+++++.  +.+.++||||.....     ..+++.+.
T Consensus        63 ~~t~~eL~~l~~~~-----------------~~~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~~-----~~~~~~v~  120 (234)
T cd08570          63 DSTWDELSHLRTIE-----------------EPHQPMPTLKDVLEWLVEHELPDVKLMLDIKRDNDP-----EILFKLIA  120 (234)
T ss_pred             cCCHHHHhhccccc-----------------CCCccCCcHHHHHHHHHhcCCCCeEEEEEECCCCCH-----HHHHHHHH
Confidence            99999999998751                 0236899999999999764  335799999964321     24667888


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCc-cc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTES-FT  506 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~-~~  506 (671)
                      +++++++......++|+|+||+++.++.+++. |+++++++....      .....+..+..  .+  ..+.+.... +.
T Consensus       121 ~~i~~~~~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~------~~~~~~~~~~~--~~--~~~~~~~~~~~~  190 (234)
T cd08570         121 EMLAVKPDLDFWRERIILGLWHLDFLKYGKEVLPGFPVFHIGFSL------DYARHFLNYSE--KL--VGISMHFVSLWG  190 (234)
T ss_pred             HHHHhcCCcccccCCEEEEeCCHHHHHHHHHhCCCCCeEEEEcCH------HHHHHHhcccc--cc--ceEEeeeehhhc
Confidence            88888753211116999999999999999999 999998876321      11111111110  01  111111100 01


Q ss_pred             ccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894          507 TNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP  564 (671)
Q Consensus       507 ~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P  564 (671)
                      ..++++++++|++|++|++||+|++.             ++.+++ ++||||||||+|
T Consensus       191 ~~~~~~v~~~~~~gl~v~~wTvn~~~-------------~~~~l~-~~gvdgiiTD~P  234 (234)
T cd08570         191 PFGQAFLPELKKNGKKVFVWTVNTEE-------------DMRYAI-RLGVDGVITDDP  234 (234)
T ss_pred             ccCHHHHHHHHHCCCEEEEEecCCHH-------------HHHHHH-HCCCCEEEeCCC
Confidence            14679999999999999999999987             899885 999999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip

>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins

Probab=100.00  E-value=1.2e-41  Score=350.44  Aligned_cols=242  Identities=21%  Similarity=0.280  Sum_probs=186.5

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|.|+|+                 ++| .+.+
T Consensus         1 iiaHRG~~~~~pENT~~af~~A~~~g~d~vE~Dv~~TkDg~~Vv~HD~~l~r~t~-----------------~~~-~i~~   62 (249)
T cd08561           1 VIAHRGGAGLAPENTLLAFEDAVELGADVLETDVHATKDGVLVVIHDETLDRTTD-----------------GTG-PVAD   62 (249)
T ss_pred             CcccCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeECCCCCEEEECCCccccccC-----------------CCC-chhh
Confidence            6899999999999999999999999999999999999999999999999999999                 667 7999


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCccc-ccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEA-KNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKA  430 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~-~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~  430 (671)
                      +||+||++|+.+  .+|...   ..+...+ ..++++|||+|+|+++++   ..++||||...       ..++++++++
T Consensus        63 ~t~~el~~l~~~--~~~~~~---~~~~~~~~~~~~~iptL~evl~~~~~---~~~~ieiK~~~-------~~~~~~~~~~  127 (249)
T cd08561          63 LTLAELRRLDAG--YHFTDD---GGRTYPYRGQGIRIPTLEELFEAFPD---VRLNIEIKDDG-------PAAAAALADL  127 (249)
T ss_pred             CCHHHHhhcCcC--ccccCc---cccccccCCCCccCCCHHHHHHhCcC---CcEEEEECCCc-------hhHHHHHHHH
Confidence            999999999876  233210   0010001 124799999999999976   37999999753       2578999999


Q ss_pred             HHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHH--HHHhcCCceeee-cC-CCcc
Q 005894          431 LSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKY--ASAVTVTRTSVI-ST-TESF  505 (671)
Q Consensus       431 l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~--a~~v~~~~~~v~-~~-~~~~  505 (671)
                      ++++++.    ++++++||+.++|.++++. |+++++++.....      .+......  ..........+. +. +.++
T Consensus       128 l~~~~~~----~~~~~~Sf~~~~l~~~~~~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (249)
T cd08561         128 IERYGAQ----DRVLVASFSDRVLRRFRRLCPRVATSAGEGEVA------AFVLASRLGLGSLYSPPYDALQIPVRYGGV  197 (249)
T ss_pred             HHHcCCC----CcEEEEECCHHHHHHHHHHCCCcceeccHHHHH------HHHHHhhcccccccCCCCcEEEcCcccCCe
Confidence            9999977    7999999999999999999 9999887642210      00000000  000001111111 11 1122


Q ss_pred             cccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHH
Q 005894          506 TTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY  570 (671)
Q Consensus       506 ~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~  570 (671)
                      ...++.+++.+|++|+.|++||+|+..             ++.+++ ++||||||||+|..+.++
T Consensus       198 ~~~~~~~v~~~~~~G~~v~vWTVN~~~-------------~~~~l~-~~gVdgIiTD~p~~~~~~  248 (249)
T cd08561         198 PLVTPRFVRAAHAAGLEVHVWTVNDPA-------------EMRRLL-DLGVDGIITDRPDLLLEV  248 (249)
T ss_pred             ecCCHHHHHHHHHCCCEEEEEecCCHH-------------HHHHHH-hcCCCEEEcCCHHHHHhh
Confidence            345689999999999999999999987             899885 999999999999998865

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins

Probab=100.00  E-value=2e-41  Score=346.32  Aligned_cols=236  Identities=25%  Similarity=0.292  Sum_probs=181.5

Q ss_pred             eEEeccCCCCC-CCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccc
Q 005894          271 LIITHNGASGV-YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFS  349 (671)
Q Consensus       271 ~iIAHRG~s~~-~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i  349 (671)
                      +||||||+++. +||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|+                 ++| .+
T Consensus         1 ~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~DV~~T~Dg~~vv~HD~~l~r~t~-----------------~~~-~v   62 (240)
T cd08566           1 LVVAHRGGWGAGAPENSLAAIEAAIDLGADIVEIDVRRTKDGVLVLMHDDTLDRTTN-----------------GKG-KV   62 (240)
T ss_pred             CeEecCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCCCccccC-----------------CCC-ch
Confidence            48999999999 999999999999999999999999999999999999999999999                 677 79


Q ss_pred             ccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHH
Q 005894          350 FDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTK  429 (671)
Q Consensus       350 ~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~  429 (671)
                      .++||+||++++.+.  ||.          .+ .+++||||+|+|++++++  ..++||||..          .++.+++
T Consensus        63 ~~~t~~el~~l~~~~--~~~----------~~-~~~~iptL~evl~~~~~~--~~l~iEiK~~----------~~~~~~~  117 (240)
T cd08566          63 SDLTLAEIRKLRLKD--GDG----------EV-TDEKVPTLEEALAWAKGK--ILLNLDLKDA----------DLDEVIA  117 (240)
T ss_pred             hhCcHHHHHhCCcCC--CcC----------CC-CCCCCCCHHHHHHhhhcC--cEEEEEECch----------HHHHHHH
Confidence            999999999999873  332          12 368999999999999886  5899999964          3477899


Q ss_pred             HHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc-
Q 005894          430 ALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT-  507 (671)
Q Consensus       430 ~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~-  507 (671)
                      +++++++.    ++++++||+.+.++.++++ |++++++++......     ..........+++  ..+.+..   .. 
T Consensus       118 ~~~~~~~~----~~v~~~sf~~~~l~~~~~~~p~~~~~~l~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~---~~~  183 (240)
T cd08566         118 LVKKHGAL----DQVIFKSYSEEQAKELRALAPEVMLMPIVRDAEDL-----DEEEARAIDALNL--LAFEITF---DDL  183 (240)
T ss_pred             HHHHcCCc----ccEEEEECCHHHHHHHHHhCCCCEEEEEEccCcch-----hHHHHhcccccce--EEEEEec---ccc
Confidence            99999987    7999999999999999999 999999988543111     1001111112221  3333332   21 


Q ss_pred             cchHHHHHHHHc-CCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894          508 NATNILRDLHSA-NISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP  564 (671)
Q Consensus       508 ~~~~~V~~~~~~-Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P  564 (671)
                      .....+.+++++ |++|++||+|+......-....|...++.+++ ++||||||||+|
T Consensus       184 ~~~~~~~~~~~~~Gl~v~~wTvn~~~~~~~~~~~~~~~~~~~~l~-~~Gvd~I~TD~P  240 (240)
T cd08566         184 DLPPLFDELLRALGIRVWVNTLGDDDTAGLDRALSDPREVWGELV-DAGVDVIQTDRP  240 (240)
T ss_pred             ccHHHHHHHHHhCCCEEEEECCCcccccchhhhhhCchhHHHHHH-HcCCCEEecCCC
Confidence            245678888887 99999999996321000000011223788874 999999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.

>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

Probab=100.00  E-value=1.2e-39  Score=332.12  Aligned_cols=225  Identities=18%  Similarity=0.178  Sum_probs=176.8

Q ss_pred             CceEEeccCCCCC---CCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccc
Q 005894          269 RPLIITHNGASGV---YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKER  345 (671)
Q Consensus       269 ~p~iIAHRG~s~~---~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~  345 (671)
                      ++.+|||||+++.   +||||++||++|++.|+ +||+|||+||||++||+||.+|+|+|+                 ++
T Consensus         3 ~~~~iaHRG~~~~~~~~pENTl~af~~A~~~G~-~iE~DV~lT~Dg~lVv~HD~~l~r~t~-----------------~~   64 (237)
T cd08585           3 KDRPIAHRGLHDRDAGIPENSLSAFRAAAEAGY-GIELDVQLTADGEVVVFHDDNLKRLTG-----------------VE   64 (237)
T ss_pred             cCCceECCCCCCCCCCCCccHHHHHHHHHHcCC-cEEEEeeECCCCCEEEeccchHhhhcC-----------------CC
Confidence            3568999999874   79999999999999999 899999999999999999999999999                 67


Q ss_pred             ccccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHH
Q 005894          346 GIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVD  425 (671)
Q Consensus       346 G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~  425 (671)
                      | .|.++||+||++|+.+.                  .+++||||+|+|++++++  .+++||||....    ....+++
T Consensus        65 ~-~v~~~t~~eL~~l~~~~------------------~~~~iPtL~evl~~~~~~--~~l~iEiK~~~~----~~~~l~~  119 (237)
T cd08585          65 G-RVEELTAAELRALRLLG------------------TDEHIPTLDEVLELVAGR--VPLLIELKSCGG----GDGGLER  119 (237)
T ss_pred             C-ccccCCHHHHhcCCCCC------------------CCCCCCCHHHHHHHhccC--ceEEEEEccCCc----cchHHHH
Confidence            7 79999999999999751                  257899999999999865  579999997542    2235788


Q ss_pred             HHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHH--HHHH--HHHhcCCceeeec
Q 005894          426 AVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEE--IKKY--ASAVTVTRTSVIS  500 (671)
Q Consensus       426 ~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~--i~~~--a~~v~~~~~~v~~  500 (671)
                      .+++++++++      .+++++|||+++|+++++. |++++++++.....+........  ....  ....++  ..+.+
T Consensus       120 ~v~~~l~~~~------~~v~i~SF~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  191 (237)
T cd08585         120 RVLAALKDYK------GPAAIMSFDPRVVRWFRKLAPGIPRGQLSEGSNDEADPAFWNEALLSALFSNLLTRP--DFIAY  191 (237)
T ss_pred             HHHHHHHhcC------CCEEEEECCHHHHHHHHHHCCCCCEEEEecCCcccccccchhHHHHHhhhhhhccCC--CEEEe
Confidence            9999998763      4899999999999999999 99999999854321110100000  0011  111233  23333


Q ss_pred             CCCcccccchHHHHHHHHc-CCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEE
Q 005894          501 TTESFTTNATNILRDLHSA-NISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITT  561 (671)
Q Consensus       501 ~~~~~~~~~~~~V~~~~~~-Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiT  561 (671)
                      ..   ...+.++|+++|++ |+.|++||||++.             ++++++ ++|+++||-
T Consensus       192 ~~---~~~~~~~v~~~~~~~G~~v~vWTVnd~~-------------~~~~l~-~~G~~~i~~  236 (237)
T cd08585         192 HL---DDLPNPFVTLARALLGMPVIVWTVRTEE-------------DIARLK-QYADNIIFE  236 (237)
T ss_pred             Ch---hhCcCHHHHHHHHhcCCcEEEEeCCCHH-------------HHHHHH-HhCCeeEeC
Confidence            22   23467899999999 9999999999998             899885 999999873

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases

Probab=100.00  E-value=1.9e-39  Score=331.47  Aligned_cols=231  Identities=14%  Similarity=0.188  Sum_probs=176.2

Q ss_pred             EEeccCC--CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccc
Q 005894          272 IITHNGA--SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFS  349 (671)
Q Consensus       272 iIAHRG~--s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i  349 (671)
                      +|||||+  ++.+||||++||++|++.|||+||+|||+||||++||+||.+++|+.+...             ..++ .+
T Consensus         1 ~~aHRG~G~~~~~pENTl~Af~~A~~~G~d~iE~DV~lTkDg~lVv~HD~~~~r~~~~g~-------------~~~~-~i   66 (237)
T cd08583           1 LIAHAMGGIDGKTYTNSLDAFEHNYKKGYRVFEVDLSLTSDGVLVARHSWDESLLKQLGL-------------PTSK-NT   66 (237)
T ss_pred             CeeecCCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeEccCCCEEEEECCcCchhhhcCC-------------cccc-cc
Confidence            4899996  788999999999999999999999999999999999999999987633100             0144 68


Q ss_pred             ccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHH
Q 005894          350 FDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTK  429 (671)
Q Consensus       350 ~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~  429 (671)
                      .++|++||++++..                   +++++|||+|+|+++++.+.+.++||||.... .  .-..++..+++
T Consensus        67 ~~~t~~el~~~~~~-------------------~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~-~--~~~~~~~~l~~  124 (237)
T cd08583          67 KPLSYEEFKSKKIY-------------------GKYTPMDFKDVIDLLKKYPDVYIVTDTKQDDD-N--DIKKLYEYIVK  124 (237)
T ss_pred             cCCCHHHHhhcccc-------------------CCCCCCCHHHHHHHHHhCCCeEEEEEecCCCc-c--cHHHHHHHHHH
Confidence            99999999997653                   24789999999999986433578999996432 0  00135668888


Q ss_pred             HHHhc--CCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCccc
Q 005894          430 ALSNA--TFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFT  506 (671)
Q Consensus       430 ~l~~~--~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~  506 (671)
                      .++++  ++.    +|++++||++..|+.+++. |....+++.....    ......+..++...+.  ..+++..   .
T Consensus       125 ~~~~~~~~~~----~~v~~~SF~~~~L~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~---~  191 (237)
T cd08583         125 EAKEVDPDLL----DRVIPQIYNEEMYEAIMSIYPFKSVIYTLYRQD----SIRLDEIIAFCYENGI--KAVTISK---N  191 (237)
T ss_pred             HHHhhccccc----ceeEEEecCHHHHHHHHHhCCCcceeeEecccc----ccchHHHHHHHHHcCC--cEEEech---h
Confidence            88886  355    6999999999999999999 8766555542210    0112233344444443  3444443   2


Q ss_pred             ccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChh
Q 005894          507 TNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPA  565 (671)
Q Consensus       507 ~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~  565 (671)
                      ..++.+++++|++|+.|++||+|++.             +|++++ ++||||||||++.
T Consensus       192 ~~~~~~v~~~~~~Gl~v~vwTVn~~~-------------~~~~l~-~~GVdgiiTD~~~  236 (237)
T cd08583         192 YVNDKLIEKLNKAGIYVYVYTINDLK-------------DAQEYK-KLGVYGIYTDFLT  236 (237)
T ss_pred             hcCHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-HcCCCEEEeCCCC
Confidence            34689999999999999999999997             899885 9999999999984

This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.

>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]

Probab=100.00  E-value=3.2e-38  Score=326.36  Aligned_cols=246  Identities=26%  Similarity=0.386  Sum_probs=194.9

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      .|+||||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|||+                 +.| .
T Consensus         5 ~~~iiaHRG~s~~~PENTl~Af~~A~~~gad~iE~Dv~lTkDg~lVv~HD~~~drt~~-----------------~~~-~   66 (257)
T COG0584           5 MPLIIAHRGASGYAPENTLAAFELAAEQGADYIELDVQLTKDGVLVVIHDETLDRTTN-----------------GLG-T   66 (257)
T ss_pred             ceEEEeccCcCCCCCcchHHHHHHHHHcCCCEEEeeccCccCCcEEEecccchhhhcc-----------------Ccc-c
Confidence            5799999999999999999999999999999999999999999999999999999999                 667 6


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCc-HHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLG-VVDAV  427 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~-~~~~v  427 (671)
                      +.++||+|+++++.+.           +..+.+  .+.+|||+|+++.+ +. .++++||||.+....+   .. .+..+
T Consensus        67 ~~~~~~~~~~~~~~~~-----------~~~~~~--~~~ip~l~~~l~~~-~~-~~~l~ieiK~~~~~~~---~~~~~~~~  128 (257)
T COG0584          67 VRDLTLAELKRLDAGS-----------FRIPTF--GEEIPTLEELLEAT-GR-KIGLYIEIKSPGFHPQ---EGKILAAL  128 (257)
T ss_pred             cccCChhhhcCcccCc-----------ccCCCC--CCccCCHHHHHHHh-cc-cCCeEEEecCCCcccc---hhhhHHHH
Confidence            8899999999999541           222333  58999999999999 42 2689999998765432   12 45666


Q ss_pred             HHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeeccc---CCCChhHHHHHHHHHHHhcCCceeeecCCC
Q 005894          428 TKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEV---SAAPREVVEEIKKYASAVTVTRTSVISTTE  503 (671)
Q Consensus       428 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~---~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~  503 (671)
                      +..+.+..... ...+++++||+...+..+++. |.+++++++....   .......+..+..++..+++....+..   
T Consensus       129 ~~~~~~~~~~~-~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---  204 (257)
T COG0584         129 LALLKRYGGTA-ADDRVILSSFDHAALKRIKRLAPDLPLGLLLDATDQYDWMELPRALKEVALYADGVGPDWAMLAE---  204 (257)
T ss_pred             HHHHHHhcccC-CCCceEEEecCHHHHHHHHHhCcCCceEEEEcccchhhhhhccchhhHHHhhhcccCcccceecc---
Confidence            66666664311 116999999999999999999 9999999997642   112234455566666666554332211   


Q ss_pred             cccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHH
Q 005894          504 SFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR  572 (671)
Q Consensus       504 ~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~  572 (671)
                          ..+.++..+|..|+.|++||+++++             .+..+ .+.|||||+||+|+.+.+.+.
T Consensus       205 ----~~~~~v~~~~~~gl~v~~~tv~~~~-------------~~~~~-~~~gvd~i~td~p~~~~~~~~  255 (257)
T COG0584         205 ----LLTELVDDAHAAGLKVHVWTVNEED-------------DIRLL-LEAGVDGLITDFPDLAVAFLN  255 (257)
T ss_pred             ----cccHHHHHHHhCCCeEEEEecCcHH-------------HHHHH-HHcCCCEEEcCCHHHHHHhhc
Confidence                1357999999999999999999997             46666 599999999999999988764

>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4

Probab=100.00  E-value=1.3e-37  Score=322.24  Aligned_cols=240  Identities=16%  Similarity=0.210  Sum_probs=178.5

Q ss_pred             CCceEEeccCCCCCC----------------------CchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCccccc
Q 005894          268 DRPLIITHNGASGVY----------------------AGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKT  325 (671)
Q Consensus       268 ~~p~iIAHRG~s~~~----------------------PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT  325 (671)
                      +.|+||||||+++.|                      ||||++||++|++.|+|+||||||+||||++||+||.+|+|+|
T Consensus        22 ~~p~iiaHRG~~~~~~~~~v~~~~~t~~~~~~~~~~~pENTl~Af~~A~~~Gad~IE~DV~lTkDg~lVV~HD~tL~R~T  101 (309)
T cd08613          22 GKPKLLAHRGLAQTFDREGVENDTCTAERIDPPTHDYLENTIASMQAAFDAGADVVELDVHPTKDGEFAVFHDWTLDCRT  101 (309)
T ss_pred             CCceEEeccCCCcccccccccccccccccccCcCCCCCchHHHHHHHHHHcCCCEEEEEEEEccCCeEEEEecCcccccc
Confidence            378999999997654                      9999999999999999999999999999999999999999999


Q ss_pred             CcccccccccccccccccccccccccCCHHHHhccCCCcCCCCCCCCCCCCCCc-ccccCCcccCHHHHHHHHhccCccc
Q 005894          326 TAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNP-EAKNKGKFVTLDGFLEFAKTKAVSG  404 (671)
Q Consensus       326 ~~~~~f~~r~~~~~~~~~~~G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~-~~~~~~~ipTLeEvL~~~~~~~~~~  404 (671)
                      +                 ++| .|.++|++||++|+.+  .+|....  ....| ...+.++||||+|+|+++++.   +
T Consensus       102 ~-----------------g~g-~V~dlTlaEL~~Ld~g--~~~~~~~--g~~~p~~~~~~~~IPTL~EvL~~~~~~---~  156 (309)
T cd08613         102 D-----------------GSG-VTRDHTMAELKTLDIG--YGYTADG--GKTFPFRGKGVGMMPTLDEVFAAFPDR---R  156 (309)
T ss_pred             C-----------------CCC-chhhCCHHHHhhCCcC--ccccccc--ccccccccCCCCCCcCHHHHHHhcCCC---c
Confidence            9                 788 8999999999999987  3332100  00001 011225799999999999874   7


Q ss_pred             EEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCC--hHHHHHHhcC-CCceEEEEeecccCCCChhHH
Q 005894          405 VLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDD--SSVLSKFQDV-PAYKKVLHIRKEVSAAPREVV  481 (671)
Q Consensus       405 i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd--~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l  481 (671)
                      ++||||....       ...+.+.+++++++..     ++.+.||+  .+.+++++++ |++++.-...         ..
T Consensus       157 l~IEiK~~~~-------~~~~~v~~~i~~~~~~-----r~~v~sf~s~~~~l~~~r~l~P~~~~~s~~~---------~~  215 (309)
T cd08613         157 FLINFKSDDA-------AEGELLAEKLATLPRK-----RLQVLTVYGGDKPIAALRELTPDLRTLSKAS---------MK  215 (309)
T ss_pred             EEEEeCCCCc-------cHHHHHHHHHHhcCcc-----ceEEEEEECCHHHHHHHHHHCCCCceecccc---------hH
Confidence            9999997532       3467899999998874     66667776  7789999999 9987653211         01


Q ss_pred             HHHHHHHHH----hcCCc----eeeecC-CCccccc-chHHHHHHHHcCCeEEEE----------eccCcccccccccCC
Q 005894          482 EEIKKYASA----VTVTR----TSVIST-TESFTTN-ATNILRDLHSANISVYIS----------ALRNEYLSIAFDYLA  541 (671)
Q Consensus       482 ~~i~~~a~~----v~~~~----~~v~~~-~~~~~~~-~~~~V~~~~~~Gl~V~vw----------tvn~~~~~~~~d~~~  541 (671)
                      .....|+..    ..+..    ....|. ...++.. +..+++++|++|.+|++|          |+|+++         
T Consensus       216 ~~~~~~~~~~~~g~~p~~~~~~~~~vP~~~~~~~~~w~~~f~~~~~~~g~~V~~~~~~~~~~~~~~~d~~~---------  286 (309)
T cd08613         216 DCLIEYLALGWTGYVPDSCRNTTLLIPLNYAPWLWGWPNRFLARMEAAGTRVILVGPYTGGEFSEGFDTPE---------  286 (309)
T ss_pred             HHHHHHHhhcccccCCccccCCeEecCccccceEEeCCHHHHHHHHHcCCeEEEEecccCCcccCCCCCHH---------
Confidence            111122211    11110    111222 1233444 789999999999999999          777776         


Q ss_pred             ChHHHHHHHHhhcCccEEEECChhhH
Q 005894          542 DPLIEVATFAQGVGVDGITTEFPATA  567 (671)
Q Consensus       542 D~~~e~~~~l~~~GVDgIiTD~P~~~  567 (671)
                          +|++++ +.|+|||+||+|+.+
T Consensus       287 ----~~~~l~-~~~~~gi~T~r~~~l  307 (309)
T cd08613         287 ----DLKRLP-EGFTGYIWTNKIEAL  307 (309)
T ss_pred             ----HHHHHH-hhCCCeEEeCCHhhc
Confidence                899985 999999999999875

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.

>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme

Probab=100.00  E-value=1.3e-37  Score=319.20  Aligned_cols=242  Identities=24%  Similarity=0.381  Sum_probs=161.5

Q ss_pred             ccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccccccCCH
Q 005894          275 HNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTW  354 (671)
Q Consensus       275 HRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~dlT~  354 (671)
                      |||+++.+||||++||++|++.|+|+||||||+||||++||+||.+|.|+|+                 +.| .|.++||
T Consensus         1 HRG~~~~~pENTl~af~~A~~~G~~~iE~Dv~lTkDg~~Vv~HD~~l~r~~~-----------------~~~-~i~~~t~   62 (256)
T PF03009_consen    1 HRGASGNAPENTLAAFRAAIELGADGIELDVQLTKDGVPVVFHDDTLDRTTG-----------------GDG-PISDLTY   62 (256)
T ss_dssp             TTTTTTTSSTTSHHHHHHHHHTTSSEEEEEEEE-TTS-EEE-SSSBSTTTSS-----------------TES-BGGGS-H
T ss_pred             CCCCCCCChhhHHHHHHHHHHhCCCeEcccccccCCceeEeccCCeeeeecC-----------------CCc-eeccCCH
Confidence            9999999999999999999999999999999999999999999999999999                 566 7999999


Q ss_pred             HHHhccC-CCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHh
Q 005894          355 TEIQSLK-PQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSN  433 (671)
Q Consensus       355 ~EL~~L~-~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~  433 (671)
                      +||++++ .....  ..    ..+...+...++||||+|+|+++.... ..+.|++|............+++.+...+..
T Consensus        63 ~el~~l~~~~~~~--~~----~~~~~~~~~~~~i~tl~e~l~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (256)
T PF03009_consen   63 AELKKLRTLGSKN--SP----PFRGQRIPGKQKIPTLEEVLELCAKVK-LNLEIKIKSKDEIKDPEFLKIVKDIVESVSD  135 (256)
T ss_dssp             HHHTTSBESSTTT--TC----GGTTTTSCTCB--EBHHHHHHHHHTTT-SEEEEEEEECTTSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhCcccccCC--cc----cccccceecccccCcHHHHHHhhhhcc-ceeEEEEeecccccchhhccccccccccccc
Confidence            9999999 43111  00    112222223468999999999955432 2455555533211100000234455555555


Q ss_pred             cC------CCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHH--HHHHHHHhcCCceeeecCCCc
Q 005894          434 AT------FDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEE--IKKYASAVTVTRTSVISTTES  504 (671)
Q Consensus       434 ~~------~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~--i~~~a~~v~~~~~~v~~~~~~  504 (671)
                      ..      ..    .+++++||++..+..+++. |.+++++++....     .....  ....+..+....  +......
T Consensus       136 ~~~~~~~~~~----~~i~~~sf~~~~l~~l~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~  204 (256)
T PF03009_consen  136 ILKNSKQALS----RRIIISSFDPEALKQLKQRAPRYPVGFLFEQDD-----EAPADISLFELYKFVKCPG--FLASVWN  204 (256)
T ss_dssp             CHHHHHHHHC----TSEEEEESCHHHHHHHHHHCTTSEEEEEESSCH-----HHHHH-CCHHHHHHHTTTE--EEEEHGG
T ss_pred             cccccccccc----cccccccCcHHHHHHHHhcCCCceEEEEeccCc-----cccccchhhHHHHhhcccc--ccccccc
Confidence            54      33    6999999999999999999 9999999985431     11111  011122222211  1111111


Q ss_pred             ccc--cchHHHHHHHHcCCeEEEEeccCc--ccccccccCCChHHHHHHHHhhcCccEEEECChhh
Q 005894          505 FTT--NATNILRDLHSANISVYISALRNE--YLSIAFDYLADPLIEVATFAQGVGVDGITTEFPAT  566 (671)
Q Consensus       505 ~~~--~~~~~V~~~~~~Gl~V~vwtvn~~--~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~  566 (671)
                      +..  ..+++|+.+|++|+.|++||+|++  .             ++.+++ ++||||||||+|++
T Consensus       205 ~~~~~~~~~~v~~~~~~g~~v~~wtvn~~~~~-------------~~~~l~-~~gvdgIiTD~P~~  256 (256)
T PF03009_consen  205 YADRLGNPRLVQEAHKAGLKVYVWTVNDPDVE-------------DMKRLL-DLGVDGIITDFPDT  256 (256)
T ss_dssp             GGHHCEBHHHHHHHHHTT-EEEEBSB-SHSHH-------------HHHHHH-HHT-SEEEES-HHH
T ss_pred             cccccccHHHHHHHHHCCCEEEEEecCCcHHH-------------HHHHHH-hCCCCEEEEcCCCC
Confidence            111  145799999999999999999999  6             788885 99999999999985

; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....

>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

Probab=100.00  E-value=3e-37  Score=324.78  Aligned_cols=248  Identities=38%  Similarity=0.613  Sum_probs=200.3

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHcccccccc-ccC-
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQN-VYT-   80 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~-~~~-   80 (671)
                      .+...+..+||||||+||||++||+||.+|+||||+...||+|+|+|.++|.+.+||++.|+|++||+++++++. |++ 
T Consensus        23 ~A~~~Gad~IE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~~~~~~g~~v~d~T~aeL~~l~~~~~~~~~~  102 (302)
T cd08571          23 KAISDGADVLDCDVQLTKDGVPICLPSINLDNSTTIASVFPKRKKTYVVEGQSTSGIFSFDLTWAEIQTLKPIISNPFSV  102 (302)
T ss_pred             HHHHcCCCEEEeeeeEcCCCcEEEeCCchhcCCcccccccccccceecccCcccCCeeeeeCCHHHHhhCcccccCcccc
Confidence            344567889999999999999999999999999999999999999999999999999999999999999999643 332 


Q ss_pred             --CCccCCCCCCCCChhhhhHHHHH--------hcC----------ccHHHHHHHHHHHcCC----ceEEEeCCChHHHH
Q 005894           81 --RSEAFDNTQPIPTPDTIYDLFYS--------QHN----------ISAAKYITEYLQKLIS----NVYYISSPEIGFLK  136 (671)
Q Consensus        81 --r~~~f~~~~~IptL~ev~~~~~~--------~~~----------~~~~~~v~~~l~~~~~----~~~~isSf~~~~L~  136 (671)
                        |.+.|.++++||||+||++.+..        +++          ..+++.+++++++++.    ++++||||++..|+
T Consensus       103 ~~~~~~~~~~~~IptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~L~  182 (302)
T cd08571         103 LFRNPRNDNAGKILTLEDFLTLAKPKSLSGVWINVENAAFLAEHKGLLSVDAVLTSLSKAGYDQTAKKVYISSPDSSVLK  182 (302)
T ss_pred             cCCCcccCCCCCcCCHHHHHHhhhccCCceEEEEccCchhhhhhccccHHHHHHHHHHHcCCCCCCCCEEEeCCCHHHHH
Confidence              45566667899999999654422        111          2467788999999984    58999999999999


Q ss_pred             HhhhhcC--CCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHc
Q 005894          137 TMDRKVD--HNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNA  214 (671)
Q Consensus       137 ~i~~~~~--~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~  214 (671)
                      .+++ ..  | ..++++.+ +..  ..    .+  ....+..++.||+++++++++++|.++ ..|....+++|++||++
T Consensus       183 ~~~~-~~~~p-~v~~~~l~-~~~--~~----~~--~~~~l~~~~~~a~~v~~~~~~~~~~~~-~~~~~~~~~~V~~ah~~  250 (302)
T cd08571         183 SFKK-RVGTK-LVFRVLDV-DDT--EP----DT--LLSNLTEIKKFASGVLVPKSYIWPVDS-DSFLTPQTSVVQDAHKA  250 (302)
T ss_pred             HHHh-ccCCC-ceEEEeec-CCC--cC----CC--ChhHHHHHHHhcCccccChhHeeecCC-CCcccCccHHHHHHHHc
Confidence            9995 55  5 47777532 111  00    01  012356777889999999999987654 45555667999999999


Q ss_pred             CCeEEEeeecCCc-ccCCCCCCChHHHHHHHhhc--CceeeeeEeecCCCcccc
Q 005894          215 GLQVYASGFANDI-YSSYSYNFEPEAEYLTFIDN--SQFAVDGFITDFPTTATE  265 (671)
Q Consensus       215 Gl~V~~wtv~~~~-~~~~~~~~d~~~e~~~~i~~--g~~~Vdgv~td~p~~~~~  265 (671)
                      |++|++||||++. ...|+|..|+..++.+++..  |   |||||||||..+.+
T Consensus       251 Gl~V~~wTvn~~~~~~~~~~~~~~~~~~~~~~~~~~g---VDGiiTD~P~~~~~  301 (302)
T cd08571         251 GLEVYVSGFANEFVSLAYDYSADPTLEILSFVGNGNS---VDGVITDFPATAAR  301 (302)
T ss_pred             CCEEEEEEEecCcccccccccCCHHHHHHHHHHhcCC---CCEEEecCchhhhc
Confidence            9999999999985 47899999999999999987  7   99999999998754

This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv

>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins

Probab=100.00  E-value=3.5e-36  Score=317.59  Aligned_cols=250  Identities=32%  Similarity=0.487  Sum_probs=203.6

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccc--cccccccccccCCcccccccccccCHHHHccccccccccCC
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTING--AFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR   81 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~--~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r   81 (671)
                      +...+..+||||||+||||++||+||.+|+||||+..  .||+|++++.++|.+..|+++.|+|++||+++++++.+.++
T Consensus        24 A~~~Gad~iE~DVqlTkDg~lVv~HD~~l~rtt~~~~~~~~~~r~~~~~i~~~~~~~~~v~d~t~~eL~~l~~~~~~~~~  103 (309)
T cd08602          24 AIEQGADFIEPDLVSTKDGVLICRHEPELSGTTDVADHPEFADRKTTKTVDGVNVTGWFTEDFTLAELKTLRARQRLPYR  103 (309)
T ss_pred             HHHcCCCEEEEeeeECCCCcEEEeCCCccccccCccccccccccccccccCCcccCCeeeccCCHHHHhhCccCCcCccc
Confidence            3456777999999999999999999999999999976  49999999999999999999999999999999998544444


Q ss_pred             CccCCCCCCCCChhhhhHHHHH-------------hcC----------ccHHHHHHHHHHHcCC----ceEEEeCCChHH
Q 005894           82 SEAFDNTQPIPTPDTIYDLFYS-------------QHN----------ISAAKYITEYLQKLIS----NVYYISSPEIGF  134 (671)
Q Consensus        82 ~~~f~~~~~IptL~ev~~~~~~-------------~~~----------~~~~~~v~~~l~~~~~----~~~~isSf~~~~  134 (671)
                      .+.|.+.++||||+|+++.+..             |++          ..+++.|++++++++.    ++++|+||+++.
T Consensus       104 ~~~~~~~~~iptL~Evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~v~i~SFd~~~  183 (309)
T cd08602         104 DQSYDGQFPIPTFEEIIALAKAASAATGRTVGIYPEIKHPTYFNAPLGLPMEDKLLETLKKYGYTGKKAPVFIQSFEVTN  183 (309)
T ss_pred             CcccCCCcCcCCHHHHHHHHHhhhhcccccceeEEeecCchhcccccCCCHHHHHHHHHHHcCCCCCCCCEEEECCCHHH
Confidence            4557756799999999654421             112          2577899999999884    489999999999


Q ss_pred             HHHhhhhcCCCCcceEEEecCCCC--cCC--CCCCCHHHHhh--cHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHH
Q 005894          135 LKTMDRKVDHNTTKLVFMVLEPNA--VEP--TTNQTYGSILK--NLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLV  208 (671)
Q Consensus       135 L~~i~~~~~~~~~~~v~~~~~~~~--~~~--~~~~~y~~~~~--~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V  208 (671)
                      |+.+++..   ..++++++.....  ..+  ..+.+|..+..  .+..++.+++++++++.+++|... .+++...+++|
T Consensus       184 L~~~~~~~---~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~v  259 (309)
T cd08602         184 LKYLRNKT---DLPLVQLIDDATIPPQDTPEGDSRTYADLTTDAGLKEIATYADGIGPWKDLIIPSDA-NGRLGTPTDLV  259 (309)
T ss_pred             HHHHHhhh---CCCeEEEecCCCCCcccccccCccchhhhcCHHHHHHHHhhceEEecchheEEecCC-CCcccCccHHH
Confidence            99999644   3788876533321  111  23456664322  466777889999999999988765 56677778999


Q ss_pred             HHHHHcCCeEEEeeecCC-cccCCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          209 TDAHNAGLQVYASGFAND-IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       209 ~~ah~~Gl~V~~wtv~~~-~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                      +.||++|++|++||||++ ...+|+|++|+..+++.+++.|   ||||+||||
T Consensus       260 ~~a~~~gl~v~~wTvn~~~~~~~~~~~~~~~~~~~~l~~~G---VdgiiTD~P  309 (309)
T cd08602         260 EDAHAAGLQVHPYTFRNENTFLPPDFFGDPYAEYRAFLDAG---VDGLFTDFP  309 (309)
T ss_pred             HHHHHcCCEEEEEEecCCCcccCcccCCCHHHHHHHHHHhC---CCEEeCCCC
Confidence            999999999999999998 4578999999999999999998   999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.

>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins

Probab=100.00  E-value=6.2e-35  Score=307.14  Aligned_cols=244  Identities=25%  Similarity=0.400  Sum_probs=191.4

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccc-cccccccccccCCcccccccccccCHHHHccccccc--cccC
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTING-AFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQ--NVYT   80 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~-~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~--~~~~   80 (671)
                      +...+..+||||||+||||++||+||.+|+||||+.. .|++|++++. ++.+.+||++.|||++||+++++++  +|+.
T Consensus        24 A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~rtt~~~~~~~~~~~~~~~-~~~~~~~~~v~d~t~~eL~~l~~~~~~~~~~  102 (300)
T cd08604          24 AVKDGADVIDCSVQMSKDGVPFCLDSINLINSTTVATSKFSNRATTVP-EIGSTSGIFTFDLTWSEIQTLKPAISNPYSV  102 (300)
T ss_pred             HHHcCCCEEEEeeeEcCCCCEEEeccccccCcccCCcccccccccccc-cccccCceeeecCcHHHHhhCccCCcCcccc
Confidence            3456777999999999999999999999999999987 8999999964 3444789889999999999999973  4553


Q ss_pred             ----CCccCCCCCCCCChhhhhHHHHH--------hc----------CccHHHHHHHHHHHcCC-----ceEEEeCCChH
Q 005894           81 ----RSEAFDNTQPIPTPDTIYDLFYS--------QH----------NISAAKYITEYLQKLIS-----NVYYISSPEIG  133 (671)
Q Consensus        81 ----r~~~f~~~~~IptL~ev~~~~~~--------~~----------~~~~~~~v~~~l~~~~~-----~~~~isSf~~~  133 (671)
                          |.+.|.++++||||+|+++.+..        ++          +..+++.+++++++++.     ++++||||+++
T Consensus       103 ~~~~~~~~~~~~~~iptL~Evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SF~~~  182 (300)
T cd08604         103 TGLFRNPANKNAGKFLTLSDFLDLAKNKSLSGVLINVENAAYLAEKKGLDVVDAVLDALTNAGYDNQTAQKVLIQSTDSS  182 (300)
T ss_pred             cCcCCCcccCCCCCCCCHHHHHHHHHhcCCceEEEEeeccchhhhccCccHHHHHHHHHHHcCCCCCCCCeEEEEcCCHH
Confidence                44566667899999999654321        11          12477899999999884     47899999999


Q ss_pred             HHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHH
Q 005894          134 FLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHN  213 (671)
Q Consensus       134 ~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~  213 (671)
                      .|+.+++..   ..++++.+... .      ..+  ....+..++.++++++++...++|..  ..++...+++|++||+
T Consensus       183 ~L~~~~~~~---~~~~~~l~~~~-~------~~~--~~~~~~~~~~~a~~v~~~~~~~~~~~--~~~~~~~~~~v~~a~~  248 (300)
T cd08604         183 VLAAFKKQI---SYERVYVVDET-I------RDA--SDSSIEEIKKFADAVVIDRGSVFPVS--TSFLTRQTNVVEKLQS  248 (300)
T ss_pred             HHHHHHhcc---CCceEEEecCc-c------ccc--ChhHHHHHHHhccEEEeChhhccccc--CCcccCchHHHHHHHH
Confidence            999999643   37777654211 0      011  01234566778999999999888765  3556556699999999


Q ss_pred             cCCeEEEeeecCC-cccCCCCCCChHHHHHHHh-hcCceeeeeEeecCCCcccc
Q 005894          214 AGLQVYASGFAND-IYSSYSYNFEPEAEYLTFI-DNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       214 ~Gl~V~~wtv~~~-~~~~~~~~~d~~~e~~~~i-~~g~~~Vdgv~td~p~~~~~  265 (671)
                      +|++|++||||++ ...+|+|+.||..++.+++ +.|   ||||+||||.++.+
T Consensus       249 ~Gl~v~vwTvn~~~~~~~~~~~~~~~~~~~~~~~~~G---VdgIiTD~P~~~~~  299 (300)
T cd08604         249 ANLTVYVEVLRNEFVSLAFDFFADPTVEINSYVQGAG---VDGFITEFPATAAR  299 (300)
T ss_pred             CCCEEEEEEecCCccccchhccCCHHHHHHHHHHHcC---CCEEEecCchhhhc
Confidence            9999999999987 5789999999987777655 678   99999999998654

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP

>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins

Probab=100.00  E-value=9.9e-34  Score=278.42  Aligned_cols=188  Identities=26%  Similarity=0.389  Sum_probs=155.7

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||++|++.|||+||+|||+||||++||+||                                 
T Consensus         1 i~aHRG~~~~~pent~~a~~~a~~~g~~~iE~Dv~~tkDg~~vv~Hd---------------------------------   47 (189)
T cd08556           1 IIAHRGASGEAPENTLAAFRKALEAGADGVELDVQLTKDGVLVVIHD---------------------------------   47 (189)
T ss_pred             CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEEcC---------------------------------
Confidence            58999999999999999999999999999999999999999999998                                 


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKAL  431 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l  431 (671)
                                                         +|||+|+|+++++.  ..++||+|....     +..+++.+++++
T Consensus        48 -----------------------------------i~tL~e~l~~~~~~--~~i~leiK~~~~-----~~~~~~~l~~~i   85 (189)
T cd08556          48 -----------------------------------IPTLEEVLELVKGG--VGLNIELKEPTR-----YPGLEAKVAELL   85 (189)
T ss_pred             -----------------------------------CCCHHHHHHhcccC--cEEEEEECCCCC-----chhHHHHHHHHH
Confidence                                               58999999999973  589999998642     235789999999


Q ss_pred             HhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccch
Q 005894          432 SNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNAT  510 (671)
Q Consensus       432 ~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~  510 (671)
                      ++++..    ++++++||++..++++++. |++++++++.........   .   ..+...++  ..+.+.+   ....+
T Consensus        86 ~~~~~~----~~v~i~s~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~---~---~~~~~~~~--~~v~~~~---~~~~~  150 (189)
T cd08556          86 REYGLE----ERVVVSSFDHEALRALKELDPEVPTGLLVDKPPLDPLL---A---ELARALGA--DAVNPHY---KLLTP  150 (189)
T ss_pred             HHcCCc----CCEEEEeCCHHHHHHHHHhCCCCcEEEEeecCcccchh---h---hHHHhcCC--eEEccCh---hhCCH
Confidence            999976    7999999999999999999 999999998654321110   0   11222222  3333332   33467


Q ss_pred             HHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECC
Q 005894          511 NILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF  563 (671)
Q Consensus       511 ~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~  563 (671)
                      .+++.+|++|++|++||+|+.+             ++..+ .++|||||+||+
T Consensus       151 ~~i~~~~~~g~~v~~wtvn~~~-------------~~~~~-~~~GVdgI~TD~  189 (189)
T cd08556         151 ELVRAAHAAGLKVYVWTVNDPE-------------DARRL-LALGVDGIITDD  189 (189)
T ss_pred             HHHHHHHHcCCEEEEEcCCCHH-------------HHHHH-HHCCCCEEecCC
Confidence            9999999999999999999987             88888 499999999996

The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho

>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]

Probab=100.00  E-value=3.5e-35  Score=312.46  Aligned_cols=329  Identities=34%  Similarity=0.491  Sum_probs=270.7

Q ss_pred             HHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc----cC--CceEEeccCCCCCC
Q 005894          209 TDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA----ID--RPLIITHNGASGVY  282 (671)
Q Consensus       209 ~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~----i~--~p~iIAHRG~s~~~  282 (671)
                      .++|..|+++++|.+.++...+|+|++++..+++.++.++.++++++.+|+|......    .+  ...|++|||++|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~rga~g~~   81 (341)
T KOG2258|consen    2 DDAHIAGLEVFASGFANDFSLAFNYSYALILVTLAFLLNVLFSLLFLFSDPPPTASAHKNLFLHIGGWLIIAHRGASGDA   81 (341)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHhhhhhhhHhhhcCCccchhhhHHHhcCCCCceeEeccCCCCCC
Confidence            5789999999999999999999999999999999999999999999999999997653    33  68899999999999


Q ss_pred             CchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccccccCCHHHHhccCC
Q 005894          283 AGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKP  362 (671)
Q Consensus       283 PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~dlT~~EL~~L~~  362 (671)
                      ||||++||++|++.|||.||||||+|+||++|++||.+..|+++                 .++ .++++||.|++++.+
T Consensus        82 penT~~A~~~a~~~Gad~ie~dV~~TsDg~~v~l~d~~~~r~~~-----------------v~~-~~~~lt~~e~~~l~~  143 (341)
T KOG2258|consen   82 PENTLAAYKKAIADGADLIELDVQMTSDGVPVILHDSTTVRVTG-----------------VPE-IVFDLTWMELRKLGP  143 (341)
T ss_pred             CcccHHHHHHHHHcCCcEEEeccccCCCCceEEeecCcceeeec-----------------cee-eeccCCHHHHhccCc
Confidence            99999999999999999999999999999999999999999998                 344 489999999999999


Q ss_pred             CcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCc
Q 005894          363 QISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQ  442 (671)
Q Consensus       363 ~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~  442 (671)
                      ...+++.+        +.+ ..+++|+|+|..+.+-+.+ +.++-|.|          ..+.+++++.++++++.....+
T Consensus       144 ~~~~~~~~--------~~~-~~~~~~~l~e~v~~~~~~n-~~~l~d~~----------~~~~~~vl~~l~~~~~~~~~~~  203 (341)
T KOG2258|consen  144 KIENPFAG--------PII-TLEKLLTLAEAVASVVGNN-VAMLNDVK----------LLVVDKVLEALKNATSDFSLYD  203 (341)
T ss_pred             cccCcccc--------ccc-chhhhccHHHHHHHHHcCC-hhhhhhhh----------hhhHHHHHHHHHHHhcCCCccc
Confidence            86554311        111 3478999999999998753 23444444          1467788888888776655457


Q ss_pred             eEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccch-HHHHHHHHcC
Q 005894          443 QVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNAT-NILRDLHSAN  520 (671)
Q Consensus       443 ~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~-~~V~~~~~~G  520 (671)
                      +++++||++.++.++++. |.+.+    ...++.......+++++++.++..++..+++....+..... .++..+++.+
T Consensus       204 kv~v~s~~~~~l~~~~~~~~~~~i----~~~~~~~~ls~~~dik~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  279 (341)
T KOG2258|consen  204 KVLVQSFNPIVLYRLKKLDPFILI----GDTWRFTFLSGIEDIKKRAFAVVSSKLAIFPVSDSLVLAITKNVVAPLQKLN  279 (341)
T ss_pred             eEEEEecCcHHHHHhccCCceEEe----cceecchhhccchhhhcccceeeechHHHHHHHHHHhhhhhcceeeehhcCC
Confidence            999999999999999998 76433    33332222233456777777777777666665444444344 7899999999


Q ss_pred             CeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhcCCCCCC
Q 005894          521 ISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCSDDVE  580 (671)
Q Consensus       521 l~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~~~~~~~  580 (671)
                      +.|+++..+++ ..++.||+.++..++..+..+.|++|.+|+++..+.++.++.|.....
T Consensus       280 ~~v~~~~~~~e-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  338 (341)
T KOG2258|consen  280 LVVYVEVFNNE-VVLAVDFSAAPTIELAGWITNVGIDGYITDFHLTAPRLTDNPCEGLFG  338 (341)
T ss_pred             cEEEEEEeecc-ceeeccccccCceEeeeeeccccccCceeeccchhhHhhccccccccc
Confidence            99999999999 789999999999999999889999999999999999999999876543

>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins

Probab=100.00  E-value=7.7e-33  Score=295.20  Aligned_cols=255  Identities=15%  Similarity=0.129  Sum_probs=186.1

Q ss_pred             CcccccCCCeEEEeeceeecCCeEEeecCC-cccccccccc--cccccccccccCCcc----cccccccccCHHHHcccc
Q 005894            1 MAKSNCLSNAIMLCNLQFSKDGLGVCLSDV-RLNNITTING--AFKDQQTTKNINGNN----VRGWFSVDYTLEQLGQLY   73 (671)
Q Consensus         1 ~~~~~~~~~~~iE~DVqlTkDG~~Vv~HD~-~LdrtT~~~~--~~~~~~~~~~~~g~~----~~G~~v~d~T~~EL~~l~   73 (671)
                      |+++...+..+||||||+||||++||+||. +|+||||++.  .|++|+++..++|.+    .++|++.|||++||++++
T Consensus        37 f~~Ai~~Gad~IE~DV~lTkDg~lVV~HD~~~L~rtTnv~~~pe~a~r~~~~~~~g~~~~~~~~~~~v~d~TlaELk~L~  116 (356)
T cd08560          37 YEAAARMGAGILECDVTFTKDRELVCRHSQCDLHTTTNILAIPELAAKCTQPFTPANATKPASAECCTSDITLAEFKSLC  116 (356)
T ss_pred             HHHHHHcCCCEEEEEeeEccCCcEEEECCCccccCccCCccccchhhhccccccccccccccccCcchhhCcHHHHhcCC
Confidence            345667789999999999999999999996 8999999986  689999999999987    678889999999999999


Q ss_pred             cccccc----------------CCCccCCCCCCCCChhhhhHHHHH-------hcC-----------c---cHHHHHHHH
Q 005894           74 LVQNVY----------------TRSEAFDNTQPIPTPDTIYDLFYS-------QHN-----------I---SAAKYITEY  116 (671)
Q Consensus        74 ~~~~~~----------------~r~~~f~~~~~IptL~ev~~~~~~-------~~~-----------~---~~~~~v~~~  116 (671)
                      +++.++                .|+..|.++++||||+|+++.+-.       |.+           .   .+++.++++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~IPTL~Evl~lv~~~~v~l~iEiK~~~~~~~~~g~~~~~~~~~~l~~~  196 (356)
T cd08560         117 GKMDASNPSATTPEEYQNGTPDWRTDLYATCGTLMTHKESIALFKSLGVKMTPELKSPSVPMPFDGNYTQEDYAQQMIDE  196 (356)
T ss_pred             CccccccccccccccccccccccccccccCCCCCCCHHHHHHHHHhcCceEEEEeCCCcccccccccccHHHHHHHHHHH
Confidence            864221                122335557899999999554321       222           0   367889999


Q ss_pred             HHHcCC--ceEEEeCCChHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHH-HHhhceecCCCcceee
Q 005894          117 LQKLIS--NVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAI-KSFASGIVVPKSYIIP  193 (671)
Q Consensus       117 l~~~~~--~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i-~~~a~~i~~~~~~i~p  193 (671)
                      +++++.  ++++||||+++.|+.+++ ..| ..++.+.++...........++.   ..+..+ ..++++|++++..+.+
T Consensus       197 l~~~g~~~~~v~iqSFd~~~L~~~~~-~~p-~~~~~l~~l~~~~~~~~~~~~~~---~~l~~i~a~~a~~i~P~~~~l~~  271 (356)
T cd08560         197 YKEAGVPPSRVWPQSFNLDDIFYWIK-NEP-DFGRQAVYLDDRDDTADFPATWS---PSMDELKARGVNIIAPPIWMLVD  271 (356)
T ss_pred             HHHcCCCCCCEEEECCCHHHHHHHHH-hCC-CCCeeEEEEccCCccccccccHH---HHHHHHHhCCccEecCchhhccc
Confidence            999983  699999999999999984 445 24443323322111111111122   335666 4568999999888876


Q ss_pred             cCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcc-c--C-CC---------CCCChHHHHHHHh-hcCceeeeeEeecC
Q 005894          194 VNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIY-S--S-YS---------YNFEPEAEYLTFI-DNSQFAVDGFITDF  259 (671)
Q Consensus       194 ~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~-~--~-~~---------~~~d~~~e~~~~i-~~g~~~Vdgv~td~  259 (671)
                      .+.  .+...++++|++||++||+|++|||+++.. .  + ++         +..|...++..|+ +.|   ||||+|||
T Consensus       272 ~~~--~~~~~~~~~v~~Ah~~GL~V~~WTvr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G---vDGvftD~  346 (356)
T cd08560         272 PDE--NGKIVPSEYAKAAKAAGLDIITWTLERSGPLASGGGWYYQTIEDVINNDGDMYNVLDVLARDVG---ILGIFSDW  346 (356)
T ss_pred             ccc--ccccCCHHHHHHHHHcCCEEEEEEeecCcccccCcccccccccccccccccHHHHHHHHHHhcC---CCEEEccC
Confidence            542  333456899999999999999999987622 1  1 33         3445568888888 678   99999999


Q ss_pred             CCcccc
Q 005894          260 PTTATE  265 (671)
Q Consensus       260 p~~~~~  265 (671)
                      |.+..-
T Consensus       347 p~~~~~  352 (356)
T cd08560         347 PATVTY  352 (356)
T ss_pred             CCceeE
Confidence            998654

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins

Probab=100.00  E-value=1.5e-32  Score=291.18  Aligned_cols=245  Identities=24%  Similarity=0.321  Sum_probs=179.0

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC-
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR-   81 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r-   81 (671)
                      .+...+..+||||||+||||++||+||.+|+||||+...|++|+++.   |   . ++|.|+|++||++++++ .||+. 
T Consensus        23 ~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~---g---~-~~v~dlT~aEL~~ld~g-~~f~~~   94 (318)
T cd08600          23 LAYAQGADYLEQDVVLTKDDKLVVIHDHYLDNVTNVAEKFPDRKRKD---G---R-YYVIDFTLDELKSLSVT-ERFDIE   94 (318)
T ss_pred             HHHHcCCCEEEeeeeECcCCcEEEeCCchhhccCCcccccccccccC---C---c-eeEeeCcHHHHhhCCCC-CCcccc
Confidence            34456788999999999999999999999999999999999998652   2   2 44999999999999998 55532 


Q ss_pred             --------CccC---CCCCCCCChhhhhHHHH-------------HhcC---------ccHHHHHHHHHHHcCC----ce
Q 005894           82 --------SEAF---DNTQPIPTPDTIYDLFY-------------SQHN---------ISAAKYITEYLQKLIS----NV  124 (671)
Q Consensus        82 --------~~~f---~~~~~IptL~ev~~~~~-------------~~~~---------~~~~~~v~~~l~~~~~----~~  124 (671)
                              +.+|   ..+++||||+|+++.+.             .|.+         ..+++.+++++++++.    ++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~IptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~  174 (318)
T cd08600          95 NGKKVQVYPNRFPLWKSDFKIHTLEEEIELIQGLNKSTGKNVGIYPEIKAPWFHHQEGKDIAAATLEVLKKYGYTSKNDK  174 (318)
T ss_pred             cccccccccccCcccCCCCccCCHHHHHHHHHHhhhhcCCcceEEEeecCchhhhhccccHHHHHHHHHHHcCCCCCCCe
Confidence                    1223   24789999999965321             1222         2478899999999983    36


Q ss_pred             EEEeCCChHHHHHhhhhcCCC---CcceEEEecCCCCcCC-------CCCCCHHHHhh--cHHHHHHhhceecCCCccee
Q 005894          125 YYISSPEIGFLKTMDRKVDHN---TTKLVFMVLEPNAVEP-------TTNQTYGSILK--NLTAIKSFASGIVVPKSYII  192 (671)
Q Consensus       125 ~~isSf~~~~L~~i~~~~~~~---~~~~v~~~~~~~~~~~-------~~~~~y~~~~~--~l~~i~~~a~~i~~~~~~i~  192 (671)
                      ++|+||++..|+.++++..|+   ..++++++........       ..+.+|..+..  .+..++.+|+++++++..+.
T Consensus       175 v~i~SF~~~~L~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~~~~~~l~  254 (318)
T cd08600         175 VYLQTFDPNELKRIKNELLPKMGMDLKLVQLIAYTDWGETQEKDPGGWVNYDYDWMFTKGGLKEIAKYADGVGPWYSMII  254 (318)
T ss_pred             EEEEeCCHHHHHHHHHhhCccccCCcceEEEeccCCCCcccccccCCccccchhhhcCHHHHHHHHHhheeccCCHHHcc
Confidence            999999999999999546551   2788875532111110       12335666532  46677889999999998886


Q ss_pred             ecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHH-HhhcCceeeeeEeecCCC
Q 005894          193 PVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLT-FIDNSQFAVDGFITDFPT  261 (671)
Q Consensus       193 p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~-~i~~g~~~Vdgv~td~p~  261 (671)
                      +.++ +.+...++++|++||++||+|++||||++....|.  .+....+.. +++.|   |||||||||.
T Consensus       255 ~~~~-~~~~~~~~~~V~~ah~~Gl~V~~wTvn~~~~~~~~--~~~~~~~~~~l~~~G---VDGiiTD~P~  318 (318)
T cd08600         255 EEKS-SKGNIVLTDLVKDAHEAGLEVHPYTVRKDALPEYA--KDADQLLDALLNKAG---VDGVFTDFPD  318 (318)
T ss_pred             cccC-CCCccChHHHHHHHHHcCCEEEEEeccCCcccccc--CCHHHHHHHHHHhcC---CcEEEcCCCC
Confidence            6543 34555667999999999999999999998653332  333222222 46777   9999999995

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP

>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional

Probab=99.98  E-value=1.3e-31  Score=286.83  Aligned_cols=250  Identities=21%  Similarity=0.297  Sum_probs=180.7

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC--
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR--   81 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r--   81 (671)
                      +...+..+||||||+||||++||+||.+|+||||+...||+|++++   |   . +++.|+|++||++++++ .||+.  
T Consensus        50 A~~~GaD~IE~DV~lTkDg~lVv~HD~~l~rtT~~~~~~~~~~~~~---g---~-~~v~dlT~aEL~~ld~~-~~f~~~~  121 (355)
T PRK11143         50 AYAQGADYLEQDLVMTKDDQLVVLHDHYLDRVTDVAERFPDRARKD---G---R-YYAIDFTLDEIKSLKFT-EGFDIEN  121 (355)
T ss_pred             HHHcCCCEEEEeeeEccCCcEEEeCCchhcccCCcccccccccccC---C---c-eeEeeCcHHHHhhCCCC-CCccccc
Confidence            4456778999999999999999999999999999999999998752   2   3 44999999999999998 45431  


Q ss_pred             -------CccCC---CCCCCCChhhhhHHHH-------------HhcC---------ccHHHHHHHHHHHcCC----ceE
Q 005894           82 -------SEAFD---NTQPIPTPDTIYDLFY-------------SQHN---------ISAAKYITEYLQKLIS----NVY  125 (671)
Q Consensus        82 -------~~~f~---~~~~IptL~ev~~~~~-------------~~~~---------~~~~~~v~~~l~~~~~----~~~  125 (671)
                             +.+|.   .+++||||+|+.+.+-             .|++         ..+++.+++++++++.    +++
T Consensus       122 g~~~~~~~~~~~~~~~~~~IPTL~Evl~~~~~~~~~~~~~~~l~IEiK~~~~~~~~~~~~~~~v~~~l~~~g~~~~~~~v  201 (355)
T PRK11143        122 GKKVQVYPGRFPMGKSDFRVHTFEEEIEFIQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKVLEVLKKYGYTGKDDKV  201 (355)
T ss_pred             ccccccccccccccCCCCccCCHHHHHHHHHHhhhhcCCCceeeEeccCcccccccchhHHHHHHHHHHHhCCCCCCCCE
Confidence                   12232   4799999999955332             1222         2477889999999883    579


Q ss_pred             EEeCCChHHHHHhhhhcCCC---CcceEEEecCCCCc---CC---C--CCCCHHHHh--hcHHHHHHhhceecCCCccee
Q 005894          126 YISSPEIGFLKTMDRKVDHN---TTKLVFMVLEPNAV---EP---T--TNQTYGSIL--KNLTAIKSFASGIVVPKSYII  192 (671)
Q Consensus       126 ~isSf~~~~L~~i~~~~~~~---~~~~v~~~~~~~~~---~~---~--~~~~y~~~~--~~l~~i~~~a~~i~~~~~~i~  192 (671)
                      +|+||++..|+.+++...|.   ..++++.+......   +.   .  .+..|..+.  ..+..++.++.++++.+..+.
T Consensus       202 ~i~SFd~~~L~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~p~~~~l~  281 (355)
T PRK11143        202 YLQCFDANELKRIKNELEPKMGMDLKLVQLIAYTDWNETQEKQPDGKWVNYNYDWMFKPGAMKEVAKYADGIGPDYHMLV  281 (355)
T ss_pred             EEeCCCHHHHHHHHhhcCccccCCcceEEEeccCCCcccccccccCcccccchhhhcChhhHHHHHhhceeecCChhhee
Confidence            99999999999999656563   14777654322111   00   0  122343321  235667778999988876665


Q ss_pred             ecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHH-hhcCceeeeeEeecCCCcccccc
Q 005894          193 PVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTF-IDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       193 p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~-i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      +.+. ..++.+++++|++||++|++|++||||++..  ..|.+|+....+.+ .+.|   |||||||+|.....++
T Consensus       282 ~~~~-~~~~~~~~~~v~~ah~~Gl~V~~WTVn~~~~--~~~~~d~~~~~~~~~~~~G---VDGIiTD~P~~~~~~l  351 (355)
T PRK11143        282 DETS-TPGNIKLTGMVKEAHQAKLVVHPYTVRADQL--PEYATDVNQLYDILYNQAG---VDGVFTDFPDKAVKFL  351 (355)
T ss_pred             eccc-cCCccChHHHHHHHHHcCCEEEEEEeccccc--hhhhcChHHHHHHHHHccC---CCEEEcCChHHHHHHH
Confidence            5432 3555677899999999999999999998843  25666764443332 3778   9999999999877644

>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

Probab=99.97  E-value=1.5e-31  Score=261.44  Aligned_cols=169  Identities=21%  Similarity=0.238  Sum_probs=136.8

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||+++.+||||++||+.|++.||++||+|||+|+||++||+||.+++|+|.                         
T Consensus         1 iiaHRG~~~~~peNT~~af~~a~~~G~~~iE~DV~lt~Dg~lvv~HD~~~~r~~~-------------------------   55 (179)
T cd08555           1 VLSHRGYSQNGQENTLEAFYRALDAGARGLELDVRLTKDGELVVYHGPTLDRTTA-------------------------   55 (179)
T ss_pred             CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeEcCCCeEEEECCCccccccC-------------------------
Confidence            5899999999999999999999999999999999999999999999999987652                         


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhcc-----CcccEEEEecCchhhhhhcCCcHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTK-----AVSGVLININNAAYLASKKGLGVVDA  426 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~-----~~~~i~IeIK~~~~~~~~~~~~~~~~  426 (671)
                                                      ++++|||+|+|+++++.     ..+.++||+|....    ....+.++
T Consensus        56 --------------------------------~~~~ptl~evl~~~~~~~~~~~~~~~l~iEiK~~~~----~~~~~~~~   99 (179)
T cd08555          56 --------------------------------GILPPTLEEVLELIADYLKNPDYTIILSLEIKQDSP----EYDEFLAK   99 (179)
T ss_pred             --------------------------------CCCCCCHHHHHHHHHhhhhcCCCceEEEEEeCCCCC----cchHHHHH
Confidence                                            25799999999999872     23579999997542    22367789


Q ss_pred             HHHHHHhcC---CCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCC
Q 005894          427 VTKALSNAT---FDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTT  502 (671)
Q Consensus       427 v~~~l~~~~---~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~  502 (671)
                      +++.+++++   +.    ++|+++||        ... +..                                ..+..  
T Consensus       100 ~~~~~~~~~~~~~~----~~v~i~sf--------~~~~~~~--------------------------------~~~~~--  133 (179)
T cd08555         100 VLKELRVYFDYDLR----GKVVLSSF--------NALGVDY--------------------------------YNFSS--  133 (179)
T ss_pred             HHHHHHHcCCcccC----CCEEEEee--------cccCCCh--------------------------------hcccc--
Confidence            999999998   44    69999999        000 000                                00000  


Q ss_pred             CcccccchHHHHHHHHcCCeEEEEeccC-cccccccccCCChHHHHHHHHhhcCccEEEECC
Q 005894          503 ESFTTNATNILRDLHSANISVYISALRN-EYLSIAFDYLADPLIEVATFAQGVGVDGITTEF  563 (671)
Q Consensus       503 ~~~~~~~~~~V~~~~~~Gl~V~vwtvn~-~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~  563 (671)
                        ....++++|+++|++|++|++||+|+ ..             ++++++ ++|||||+||+
T Consensus       134 --~~~~~~~~v~~~~~~g~~v~~wtvn~~~~-------------~~~~l~-~~Gvd~i~TD~  179 (179)
T cd08555         134 --KLIKDTELIASANKLGLLSRIWTVNDNNE-------------IINKFL-NLGVDGLITDF  179 (179)
T ss_pred             --hhhcCHHHHHHHHHCCCEEEEEeeCChHH-------------HHHHHH-HcCCCEEeCCC
Confidence              02235789999999999999999998 76             788885 99999999996

The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph

>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins

Probab=99.97  E-value=8.2e-31  Score=276.11  Aligned_cols=239  Identities=27%  Similarity=0.368  Sum_probs=170.4

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccC--
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYT--   80 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~--   80 (671)
                      .+...+..+||||||+||||++||+||.+|+||||+..+++.+       |...+|..|.++|++||++++++ .|++  
T Consensus        23 ~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~t~~~~~~~~~-------~~~~~~~~v~~~t~~eL~~l~~~-~~~~~~   94 (296)
T cd08559          23 LAIEMGADYIEQDLVMTKDGVLVARHDPTLDRTTNVAEHFPFR-------GRKDTGYFVIDFTLAELKTLRAG-SWFNQR   94 (296)
T ss_pred             HHHHhCCCEEEEeeEEccCCCEEEeccchhhcCCCcccccccc-------ccCCCCeeeecCcHHHHhcCCCC-Cccccc
Confidence            3445678899999999999999999999999999997766654       33445555999999999999998 4543  


Q ss_pred             ---CCccCCCCCCCCChhhhhHHHHH-------h------cC---------ccHHHHHHHHHHHcC-C---ceEEEeCCC
Q 005894           81 ---RSEAFDNTQPIPTPDTIYDLFYS-------Q------HN---------ISAAKYITEYLQKLI-S---NVYYISSPE  131 (671)
Q Consensus        81 ---r~~~f~~~~~IptL~ev~~~~~~-------~------~~---------~~~~~~v~~~l~~~~-~---~~~~isSf~  131 (671)
                         +...+..+++||||+||++.+..       .      .+         ..+++.|++++++++ .   ++++|+||+
T Consensus        95 ~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~IEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~  174 (296)
T cd08559          95 YPERAPSYYGGFKIPTLEEVIELAQGLNKSTGRNVGIYPETKHPTFHKQEGPDIEEKLLEVLKKYGYTGKNDPVFIQSFE  174 (296)
T ss_pred             ccccCccccCCCCcCCHHHHHHHHHhhhhccCCcceEEEEecChhhhhhcCCCHHHHHHHHHHHcCCCCCCCCEEEecCC
Confidence               11122357999999999765533       1      12         246788999999998 3   689999999


Q ss_pred             hHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHh--hcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHH
Q 005894          132 IGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSIL--KNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVT  209 (671)
Q Consensus       132 ~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~--~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~  209 (671)
                      +..|+++++ ..| +.++++++.............|..+.  ..+..++.+++++++.+..+.+...  +....+.++|+
T Consensus       175 ~~~L~~~r~-~~p-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~v~  250 (296)
T cd08559         175 PESLKRLRN-ETP-DIPLVQLIDYGDWAETDKKYTYAWLTTDAGLKEIAKYADGIGPWKSLIIPEDS--NGLLVPTDLVK  250 (296)
T ss_pred             HHHHHHHHH-hCC-CCcEEEEecCCCCCccccccccchhcCHHHHHHHHHHhhhhCCCHHhcccccc--ccccCchHHHH
Confidence            999999995 556 48888765332211111112222221  1345555678888888777643221  23344469999


Q ss_pred             HHHHcCCeEEEeeecCC-cccCCCCCCChHHHHHHHhhc-CceeeeeEeecCC
Q 005894          210 DAHNAGLQVYASGFAND-IYSSYSYNFEPEAEYLTFIDN-SQFAVDGFITDFP  260 (671)
Q Consensus       210 ~ah~~Gl~V~~wtv~~~-~~~~~~~~~d~~~e~~~~i~~-g~~~Vdgv~td~p  260 (671)
                      .||++|++|++||||++ ....|+|.    .+++++++. |   |||||||+|
T Consensus       251 ~a~~~Gl~v~~WTvn~~~~~~~~~~~----~~~~~l~~~~G---VdgIiTD~P  296 (296)
T cd08559         251 DAHKAGLLVHPYTFRNENLFLAPDFK----QDMDALYNAAG---VDGVFTDFP  296 (296)
T ss_pred             HHHHcCCEEEEEEecCcccccccccc----cCHHHHHHHhC---CCEEEcCCC
Confidence            99999999999999984 12233333    337899998 8   999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),

>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins

Probab=99.96  E-value=1.5e-29  Score=260.57  Aligned_cols=213  Identities=15%  Similarity=0.137  Sum_probs=144.8

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCC-
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRS-   82 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~-   82 (671)
                      +...+..+||+|||+||||++||+||.+|+||||+                  +|. |.++|++||++++++ .||... 
T Consensus        24 A~~~G~d~iE~DV~lTkDg~lVv~HD~~l~R~t~~------------------~g~-v~~~t~~el~~ld~g-~~~~~~~   83 (263)
T cd08580          24 ALANGADAIWLTVQLSKDGVPVLYRPSDLKSLTNG------------------SGA-VSAYTAAQLATLNAG-YNFKPEG   83 (263)
T ss_pred             HHHcCCCEEEEEeEECCCCCEEEeCCCchhcccCC------------------CCC-hhhCcHHHHhcCCCc-ccccccc
Confidence            44567889999999999999999999999999999                  888 999999999999998 565321 


Q ss_pred             -ccCC-CCCCCCChhhhhHHHHH-----hcC----ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCC-----
Q 005894           83 -EAFD-NTQPIPTPDTIYDLFYS-----QHN----ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHN-----  145 (671)
Q Consensus        83 -~~f~-~~~~IptL~ev~~~~~~-----~~~----~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~-----  145 (671)
                       ..|. .+++||||+|+++.+..     +.+    ..+++.+++++++++ .++++|+||++..|+.+++ ..|.     
T Consensus        84 ~~~~~~~~~~iPtL~evl~~~~~~~l~iEiK~~~~~~~~~~v~~~i~~~~~~~~v~v~SF~~~~l~~~~~-~~p~~~~~~  162 (263)
T cd08580          84 GYPYRGKPVGIPTLEQVLRAFPDTPFILDMKSLPADPQAKAVARVLERENAWSRVRIYSTNADYQDALAP-YPQARLFES  162 (263)
T ss_pred             CcccCCCCCcCccHHHHHHhhcCCeEEEEECCCCcHHHHHHHHHHHHhcCCCCCEEEEECCHHHHHHHHh-cCccccccc
Confidence             1243 35699999999765532     222    146788999999998 6799999999999999994 5552     


Q ss_pred             -CcceEEEecCCCCcCC-CCCCCHH-----HHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHc-CCe
Q 005894          146 -TTKLVFMVLEPNAVEP-TTNQTYG-----SILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNA-GLQ  217 (671)
Q Consensus       146 -~~~~v~~~~~~~~~~~-~~~~~y~-----~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~-Gl~  217 (671)
                       .....+. ........ ...+...     .+...+..++.++.+.    ..+.|     +|.....++|+.||++ |++
T Consensus       163 ~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~l~t~~~V~~~h~~~gl~  232 (263)
T cd08580         163 RDVTRTRL-ANVAMAHQCDLPPDSGAWAGFELRRKVTVVETFTLGE----GRSPV-----QATLWTPAAVDCFRRNSKVK  232 (263)
T ss_pred             HHHHHHHH-HhhhcccccccCccchhhccccccccchheeeecccc----ccccc-----ccccCCHHHHHHHHhcCCcE
Confidence             0111110 00000000 0000000     0000111111111111    11111     2223346899999999 999


Q ss_pred             EEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCc
Q 005894          218 VYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTT  262 (671)
Q Consensus       218 V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~  262 (671)
                      |++||||++..            |+++++.|   |||||||+|..
T Consensus       233 V~~WTVN~~~~------------~~~l~~~G---VDgIiTD~P~~  262 (263)
T cd08580         233 IVLFGINTADD------------YRLAKCLG---ADAVMVDSPAA  262 (263)
T ss_pred             EEEEEeCCHHH------------HHHHHHcC---CCEEEeCCccc
Confidence            99999999855            89999999   99999999975

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.

>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

Probab=99.95  E-value=6.6e-28  Score=244.81  Aligned_cols=190  Identities=14%  Similarity=0.158  Sum_probs=139.0

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccc-cccCCC
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQ-NVYTRS   82 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~-~~~~r~   82 (671)
                      +...+..+||||||+||||++||+||.+|+|+||+                  +|. +.++|++||++++++. +||.  
T Consensus        22 A~~~gad~iE~DV~lTkDg~~Vv~HD~~l~r~t~~------------------~~~-v~~~t~~el~~l~~~~~~~~~--   80 (229)
T cd08581          22 AVDAGARFVEFDVQLSADGVPVVFHDDTLLRLTGV------------------EGL-LHELEDAELDSLRVAEPARFG--   80 (229)
T ss_pred             HHHcCCCEEEEeeeECCCCcEEEECCCccccccCC------------------Cce-eccCCHHHHhhcccccCcccc--
Confidence            44567789999999999999999999999999999                  888 9999999999998753 3443  


Q ss_pred             ccCCCCCCCCChhhhhHHHHH--hc------C------ccHHHHHHHHHHHcC--CceEEEeCCChHHHHHhhhhcCCCC
Q 005894           83 EAFDNTQPIPTPDTIYDLFYS--QH------N------ISAAKYITEYLQKLI--SNVYYISSPEIGFLKTMDRKVDHNT  146 (671)
Q Consensus        83 ~~f~~~~~IptL~ev~~~~~~--~~------~------~~~~~~v~~~l~~~~--~~~~~isSf~~~~L~~i~~~~~~~~  146 (671)
                      ..|. +++||||+||++.+..  ..      +      ..+++.+..+++.++  .++++|+||++..|+++++.  | .
T Consensus        81 ~~~~-~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~SF~~~~l~~~r~~--~-~  156 (229)
T cd08581          81 SRFA-GEPLPSLAAVVQWLAQHPQVTLFVEIKTESLDRFGLERVVDKVLRALPAVAAQRVLISFDYDLLALAKQQ--G-G  156 (229)
T ss_pred             cccC-CccCCCHHHHHHHHhhCCCceEEEEecCCcccccchhHHHHHHHHHHHhccCCeEEEeCCHHHHHHHHhc--C-C
Confidence            4555 7999999999775533  11      2      134456667777654  36899999999999999964  4 4


Q ss_pred             cceEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecC
Q 005894          147 TKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAN  225 (671)
Q Consensus       147 ~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~  225 (671)
                      .++.+.+....      .   .    ....+.. .++.+.+... +             ...|+.+|++|++|++||||+
T Consensus       157 ~~~~~l~~~~~------~---~----~~~~~~~~~~~~~~~~~~-~-------------~~~v~~~~~~G~~v~vWTVn~  209 (229)
T cd08581         157 PRTGWVLPDWD------D---A----SLAEADELQPDYLFCDKN-L-------------LPDTGDLWAGTWKWVIYEVNE  209 (229)
T ss_pred             CCeEEEeccCC------h---H----HHHHHHhhCCCEEecccc-c-------------ChhhHHHHhCCceEEEEEcCC
Confidence            77776432110      0   0    0111111 1222222221 1             246889999999999999999


Q ss_pred             CcccCCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          226 DIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       226 ~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                      +..            ++++++.|   |||||||+|
T Consensus       210 ~~~------------~~~l~~~G---VdgiiTD~P  229 (229)
T cd08581         210 PAE------------ALALAARG---VALIETDNI  229 (229)
T ss_pred             HHH------------HHHHHHhC---CcEEEcCCC
Confidence            854            88999999   999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins

Probab=99.95  E-value=2.8e-28  Score=256.83  Aligned_cols=205  Identities=11%  Similarity=0.039  Sum_probs=149.5

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCC
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRS   82 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~   82 (671)
                      .+...|..+||+|||+||||++||+||.+|+||||+...||.++          .|. +.++|++||++++++ +||+..
T Consensus        45 ~A~~~Gad~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~~~~~~~~----------~~~-V~~~TlaEL~~ld~g-~wf~~~  112 (316)
T cd08610          45 KAIEHGAHGLETDVTLSYDGVPFLMHDFTLKRTTNIGEVQPESA----------CEN-PAFFNWDFLSTLNAG-KWFVKP  112 (316)
T ss_pred             HHHHcCCCEEEEEEEEccCCCEEEeCCCccccccCCCCcccccc----------ccc-hhhCCHHHHhhCCCC-CccCcc
Confidence            34556888999999999999999999999999999988888876          566 999999999999999 776532


Q ss_pred             ccC------------C-CCCCCCChhhhhHHHHH-------hcCc---------cHHHHHHHHH-HHcCCceEEEeCCCh
Q 005894           83 EAF------------D-NTQPIPTPDTIYDLFYS-------QHNI---------SAAKYITEYL-QKLISNVYYISSPEI  132 (671)
Q Consensus        83 ~~f------------~-~~~~IptL~ev~~~~~~-------~~~~---------~~~~~v~~~l-~~~~~~~~~isSf~~  132 (671)
                      ..|            . .+++||||+||.+.+..       |.+.         .+++.+++.+ ++++....++.||+.
T Consensus       113 ~~~~~~~~~~~~~~~~~~~e~IPTLeEvL~~~~~~~~~l~IEIK~~~~~~~~~~~~~~~v~~~i~~~~~~~~~~v~sf~~  192 (316)
T cd08610         113 RPFYNMKPLSEADKERARNQSIPKLSNFLRLAEKENKLVIFDLYRPPPKHPYRHTWIRRVLEVILNEVGIEQHLVLWLPA  192 (316)
T ss_pred             cccccccccccccccccCCCCCCCHHHHHHHhHhcCceEEEEeCCCcccCcchhHHHHHHHHHHHHHcCCCCCEEEEcCH
Confidence            212            1 37999999999665432       1110         2566777776 676732334446889


Q ss_pred             HHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHH-HhhceecCCCcceeecCCCCCCcCCCcHHHHHH
Q 005894          133 GFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIK-SFASGIVVPKSYIIPVNNKTRYLEPATTLVTDA  211 (671)
Q Consensus       133 ~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~-~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~a  211 (671)
                      ..++.++ +..|. .+..+...        .         .+..+. ..+.++.+....+            ..++|+.|
T Consensus       193 ~~l~~~~-~~~P~-~~~~l~~~--------~---------~~~~l~~~~~~~l~~~~~~l------------~~~~v~~a  241 (316)
T cd08610         193 HDRQYVQ-SVAPG-FKQHVGRK--------V---------PIETLLKNNISILNLAYKKL------------FSNDIRDY  241 (316)
T ss_pred             HHHHHHH-HHCcc-hhhhhccc--------c---------cHHHHHHcCCeEEccchhhC------------CHHHHHHH
Confidence            9999998 46663 55332110        0         011122 1245555544333            25899999


Q ss_pred             HHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          212 HNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       212 h~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                      |++|++|++||||++..            ++++++.|   ||||+||+|.....
T Consensus       242 ~~~Gl~V~vWTVNd~~~------------~~~l~~~G---VDgIiTD~P~~l~~  280 (316)
T cd08610         242 KAANIHTNVYVINEPWL------------FSLAWCSG---IHSVTTNNIHLLKQ  280 (316)
T ss_pred             HHCCCEEEEECCCCHHH------------HHHHHhCC---cCEEEeCCHHHHHH
Confidence            99999999999999855            88999999   99999999998754

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.

>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins

Probab=99.95  E-value=1.1e-27  Score=243.41  Aligned_cols=192  Identities=20%  Similarity=0.226  Sum_probs=146.2

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA   84 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~   84 (671)
                      ...+..+||||||+||||++||+||.+|+|+||+                  +|. +.++|++||++++++ .|+.  +.
T Consensus        23 ~~~gad~iE~Dv~~TkDg~lvv~HD~~l~r~t~~------------------~~~-i~~lt~~el~~l~~~-~~~~--~~   80 (229)
T cd08562          23 AELGVRWVEFDVKLSGDGTLVLIHDDTLDRTTNG------------------SGA-VTELTWAELAQLDAG-SWFS--PE   80 (229)
T ss_pred             HHcCCCEEEEEEeECCCCCEEEEcCCCCccccCC------------------Cce-eecCcHHHHhhcCCC-cccC--CC
Confidence            3456779999999999999999999999999999                  888 999999999999987 4443  34


Q ss_pred             CCCCCCCCChhhhhHHHHH-hc------C------ccHHHHHHHHHHHcC-C-ceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894           85 FDNTQPIPTPDTIYDLFYS-QH------N------ISAAKYITEYLQKLI-S-NVYYISSPEIGFLKTMDRKVDHNTTKL  149 (671)
Q Consensus        85 f~~~~~IptL~ev~~~~~~-~~------~------~~~~~~v~~~l~~~~-~-~~~~isSf~~~~L~~i~~~~~~~~~~~  149 (671)
                      |. +++||||+|+++.+.. ..      +      ..+++.+++++++++ . ++++++||++..|+.+++ ..| ..++
T Consensus        81 ~~-~~~iptl~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~~v~~~Sf~~~~l~~~~~-~~p-~~~~  157 (229)
T cd08562          81 FA-GEPIPTLADVLELARELGLGLNLEIKPDPGDEALTARVVAAALRELWPHASKLLLSSFSLEALRAARR-AAP-ELPL  157 (229)
T ss_pred             CC-CCCCCCHHHHHHHHHhcCCEEEEEECCCCCccHHHHHHHHHHHHHhcCCcCCEEEECCCHHHHHHHHH-hCC-CCcE
Confidence            54 7899999999876532 11      1      135678899999998 3 889999999999999995 556 4777


Q ss_pred             EEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCccc
Q 005894          150 VFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYS  229 (671)
Q Consensus       150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~  229 (671)
                      .+.+...       ...+.+++   ..+  .+.++.+....+            ..++|+.+|++|++|++||||++.. 
T Consensus       158 ~~l~~~~-------~~~~~~~~---~~~--~~~~~~~~~~~~------------~~~~v~~~~~~g~~v~~wTvn~~~~-  212 (229)
T cd08562         158 GLLFDTL-------PADWLELL---AAL--GAVSIHLNYRGL------------TEEQVKALKDAGYKLLVYTVNDPAR-  212 (229)
T ss_pred             EEEecCC-------CcCHHHHH---HHc--CCeEEecChhhC------------CHHHHHHHHHCCCEEEEEeCCCHHH-
Confidence            7643211       11122221   111  144454443332            2589999999999999999998754 


Q ss_pred             CCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          230 SYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       230 ~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                                 +..+++.|   ||||+||+|
T Consensus       213 -----------~~~~~~~g---VdgiiTD~p  229 (229)
T cd08562         213 -----------AAELLEWG---VDAIFTDRP  229 (229)
T ss_pred             -----------HHHHHHCC---CCEEEcCCC
Confidence                       88999999   999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)

>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins

Probab=99.95  E-value=9.6e-28  Score=247.09  Aligned_cols=196  Identities=15%  Similarity=0.107  Sum_probs=143.5

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCC
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRS   82 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~   82 (671)
                      .+...+..+||||||+||||++||+||.+|+||||+...+|+++          +|. +.++|++||++++++ +||..+
T Consensus        24 ~A~~~Gad~iE~DV~lTkDg~lVV~HD~~l~Rtt~~~g~~~~~~----------~~~-v~~~T~~eL~~ld~g-~~f~~~   91 (252)
T cd08574          24 KALEHGVYGLETDVTISYDGVPFLMHDRTLRRTTNVADVFPERA----------HER-ASMFTWTDLQQLNAG-QWFLKD   91 (252)
T ss_pred             HHHHcCCCEEEEEEeEccCCcEEEeCCCcccccCCCCccccccc----------ccc-hhcCCHHHHhhCCCC-CcccCC
Confidence            34456788999999999999999999999999999966666655          456 999999999999999 676421


Q ss_pred             --------------ccCCCCCCCCChhhhhHHHHH-------hcC---------ccHHHHHHHHHHHcCC-ceEEEeCCC
Q 005894           83 --------------EAFDNTQPIPTPDTIYDLFYS-------QHN---------ISAAKYITEYLQKLIS-NVYYISSPE  131 (671)
Q Consensus        83 --------------~~f~~~~~IptL~ev~~~~~~-------~~~---------~~~~~~v~~~l~~~~~-~~~~isSf~  131 (671)
                                    ..|. +++||||+|+++.+..       +.+         ..+++.+++++++++. ++++++||+
T Consensus        92 ~~~~~~~~~~~~~~~~~~-~~~IPtL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~~~v~~s~~  170 (252)
T cd08574          92 DPFWTASSLSESDREEAG-NQSIPSLAELLRLAKKHNKSVIFDLRRPPPNHPYYQSYVNITLDTILASGIPQHQVFWLPD  170 (252)
T ss_pred             CccchhcccccchhhhcC-CCCCCCHHHHHHHHHHcCCeEEEEecCCcccCccHHHHHHHHHHHHHHcCCCcccEEEccH
Confidence                          1344 7999999999765432       112         1356789999999883 445555554


Q ss_pred             hHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHH
Q 005894          132 IGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTD  210 (671)
Q Consensus       132 ~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~  210 (671)
                      . .++.++ +..| +.++.+.  ...         +      ...++. -++++++....+            ..++|+.
T Consensus       171 ~-~~~~~~-~~~p-~~~~~~~--~~~---------~------~~~~~~~~~~~~~~~~~~~------------~~~~v~~  218 (252)
T cd08574         171 E-YRALVR-KVAP-GFQQVSG--RKL---------P------VESLRENGISRLNLEYSQL------------SAQEIRE  218 (252)
T ss_pred             H-HHHHHH-HHCC-CCeEeec--ccc---------c------hHHHHhcCCeEEccCcccC------------CHHHHHH
Confidence            4 378888 4666 4666541  110         0      111121 255665554433            2589999


Q ss_pred             HHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeec
Q 005894          211 AHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITD  258 (671)
Q Consensus       211 ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td  258 (671)
                      +|++|++|++||||++..            ++++++.|   ||||+||
T Consensus       219 ~~~~g~~v~~WTVn~~~~------------~~~l~~~G---VdgIiTD  251 (252)
T cd08574         219 YSKANISVNLYVVNEPWL------------YSLLWCSG---VQSVTTN  251 (252)
T ss_pred             HHHCCCEEEEEccCCHHH------------HHHHHHcC---CCEEecC
Confidence            999999999999999854            88999999   9999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo

>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional

Probab=99.95  E-value=1.3e-27  Score=246.02  Aligned_cols=197  Identities=15%  Similarity=0.121  Sum_probs=144.3

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||+|||+||||++||+||.+|+|+||+                  +|. |.|+|++||++++++ .|++  .
T Consensus        31 A~~~G~d~vE~DV~lT~Dg~lVV~HD~~l~R~t~~------------------~~~-v~~~t~~el~~l~~~-~~~~--~   88 (249)
T PRK09454         31 GARYGHRMIEFDAKLSADGEIFLLHDDTLERTSNG------------------WGV-AGELTWQDLAQLDAG-SWFS--A   88 (249)
T ss_pred             HHHcCCCEEEEEeeECCCCCEEEECCCcccccCCC------------------CCc-hhhCCHHHHHhcCCC-CccC--C
Confidence            44567789999999999999999999999999999                  888 999999999999998 5554  4


Q ss_pred             cCCCCCCCCChhhhhHHHHH-------hcCc------cHHHHHHHHHHHc--C-CceEEEeCCChHHHHHhhhhcCCCCc
Q 005894           84 AFDNTQPIPTPDTIYDLFYS-------QHNI------SAAKYITEYLQKL--I-SNVYYISSPEIGFLKTMDRKVDHNTT  147 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~-------~~~~------~~~~~v~~~l~~~--~-~~~~~isSf~~~~L~~i~~~~~~~~~  147 (671)
                      .|. +++||||+||++.+..       |.+.      .+.+.+..+++.+  + .++++++||++..|+.+++ ..| ..
T Consensus        89 ~~~-~~~iPtL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~SF~~~~l~~l~~-~~p-~~  165 (249)
T PRK09454         89 AFA-GEPLPTLSQVAARCRAHGMAANIEIKPTTGREAETGRVVALAARALWAGAAVPPLLSSFSEDALEAARQ-AAP-EL  165 (249)
T ss_pred             CCC-CCcCCCHHHHHHHHHhcCCEEEEEECCCCCcchhHHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHH-hCC-CC
Confidence            555 7999999999776532       1121      1223333444443  2 2578999999999999995 556 47


Q ss_pred             ceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCC
Q 005894          148 KLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAND  226 (671)
Q Consensus       148 ~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~  226 (671)
                      ++.+.+...       ...+.      ..++.. +.++.+....+            ...+|+.+|++|++|++||||++
T Consensus       166 ~~~~l~~~~-------~~~~~------~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~g~~v~~WTvn~~  220 (249)
T PRK09454        166 PRGLLLDEW-------PDDWL------ELTRRLGCVSLHLNHKLL------------DEARVAALKAAGLRILVYTVNDP  220 (249)
T ss_pred             cEEEEeccc-------cccHH------HHHHhcCCeEEecccccC------------CHHHHHHHHHCCCEEEEEeCCCH
Confidence            777643211       11111      112221 33344433222            35899999999999999999998


Q ss_pred             cccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          227 IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       227 ~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                      ..            ++++++.|   ||||+||+|.....
T Consensus       221 ~~------------~~~l~~~G---VdgIiTD~p~~~~~  244 (249)
T PRK09454        221 AR------------ARELLRWG---VDCICTDRIDLIGP  244 (249)
T ss_pred             HH------------HHHHHHcC---CCEEEeCChHhcCc
Confidence            54            88999999   99999999997654

>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins

Probab=99.95  E-value=9.6e-28  Score=248.06  Aligned_cols=207  Identities=24%  Similarity=0.321  Sum_probs=155.3

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC--
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR--   81 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r--   81 (671)
                      +...+.-+||||||+||||++||+||.+|+|+||+.                .+|+ |.++|++||++++++ .|+..  
T Consensus        24 A~~~G~d~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~----------------~~g~-v~~~t~~el~~l~~~-~~~~~~~   85 (256)
T cd08601          24 AREMGADYIELDLQMTKDGVLVAMHDETLDRTTNIE----------------RPGP-VKDYTLAEIKQLDAG-SWFNKAY   85 (256)
T ss_pred             HHHcCCCEEEEEeeECCCCeEEEeCCCccccccCCC----------------CCce-eecCcHHHHHhcCCC-ccccccC
Confidence            345577899999999999999999999999999982                1577 999999999999997 44431  


Q ss_pred             ----CccCCCCCCCCChhhhhHHHHHhc------C-----ccHHHHHHHHHHHcC-C------ceEEEeCCChHHHHHhh
Q 005894           82 ----SEAFDNTQPIPTPDTIYDLFYSQH------N-----ISAAKYITEYLQKLI-S------NVYYISSPEIGFLKTMD  139 (671)
Q Consensus        82 ----~~~f~~~~~IptL~ev~~~~~~~~------~-----~~~~~~v~~~l~~~~-~------~~~~isSf~~~~L~~i~  139 (671)
                          +..+. +++||||+||++.+....      +     ..+++.+.+++++++ .      ++++|+||++..|+.++
T Consensus        86 ~~~~~~~~~-~~~iptL~evl~~~~~~~~l~IEiK~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~v~i~Sf~~~~l~~~~  164 (256)
T cd08601          86 PEYARESYS-GLKVPTLEEVIERYGGRANYYIETKSPDLYPGMEEKLLATLDKYGLLTDNLKNGQVIIQSFSKESLKKLH  164 (256)
T ss_pred             ccccccccC-CccCCCHHHHHHHhccCceEEEEeeCCCCCCCHHHHHHHHHHHcCCCcccCCCCCEEEecCCHHHHHHHH
Confidence                11233 789999999976543321      1     247788999999987 3      68999999999999999


Q ss_pred             hhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEE
Q 005894          140 RKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVY  219 (671)
Q Consensus       140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~  219 (671)
                      + ..| ..++++.+.....     .+...   ..+..++.++.++.+....+   +         .++|+.+|++|++|+
T Consensus       165 ~-~~p-~~~~~~l~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~---~---------~~~v~~~~~~g~~v~  222 (256)
T cd08601         165 Q-LNP-NIPLVQLLWYGEG-----AETYD---KWLDEIKEYAIGIGPSIADA---D---------PWMVHLIHKKGLLVH  222 (256)
T ss_pred             H-hCC-CCcEEEEeccCcc-----cccch---hHHHHHHhcCeEeCCchhhc---C---------HHHHHHHHHCCCEEE
Confidence            5 556 4788875432211     01111   12344455667776654333   2         589999999999999


Q ss_pred             EeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894          220 ASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA  266 (671)
Q Consensus       220 ~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~  266 (671)
                      +||||+..            ++.++++.|   ||||+||+|......
T Consensus       223 ~wTvn~~~------------~~~~l~~~G---vd~IiTD~p~~~~~~  254 (256)
T cd08601         223 PYTVNEKA------------DMIRLINWG---VDGMFTNYPDRLKEV  254 (256)
T ss_pred             EEecCCHH------------HHHHHHhcC---CCEEEeCCHHHHHHh
Confidence            99999874            488999999   999999999876553

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins

Probab=99.95  E-value=1.1e-27  Score=252.73  Aligned_cols=223  Identities=15%  Similarity=0.201  Sum_probs=147.8

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHcccccccc-----
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQN-----   77 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~-----   77 (671)
                      .+...+..+||+|||+||||++||+||.+|+||||+                  +|. |.|+|++||++++++..     
T Consensus        49 ~A~~~Gad~iE~DV~lTkDG~lVV~HD~~l~Rtt~~------------------~g~-V~~~t~~eL~~l~~~~~~~~~~  109 (300)
T cd08612          49 HAVKVGTDMLELDVHLTKDGQVVVSHDENLLRSCGV------------------DKL-VSDLNYADLPPYLEKLEVTFSP  109 (300)
T ss_pred             HHHHcCCCEEEEEeeECcCCeEEEECCccccccCCC------------------Ccc-cccCCHHHHhhccccccccccC
Confidence            345667889999999999999999999999999999                  888 99999999999955321     


Q ss_pred             ccCCCccCCCCCCCCChhhhhHHHHH-----hcCc---cHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcc
Q 005894           78 VYTRSEAFDNTQPIPTPDTIYDLFYS-----QHNI---SAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTK  148 (671)
Q Consensus        78 ~~~r~~~f~~~~~IptL~ev~~~~~~-----~~~~---~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~  148 (671)
                      ++..+..|. +++||||+|+++.+..     |.+.   .+++.+++++++++ .++++++||+++.|+.+++ ..| +.+
T Consensus       110 ~~~~~~~~~-g~~IPtL~EvL~~~~~~~lnIEiK~~~~~~~~~v~~~i~~~~~~~~v~isSF~~~~L~~~~~-~~p-~i~  186 (300)
T cd08612         110 GDYCVPKGS-DRRIPLLEEVFEAFPDTPINIDIKVENDELIKKVSDLVRKYKREDITVWGSFNDEIVKKCHK-ENP-NIP  186 (300)
T ss_pred             CccccccCC-CCCCCCHHHHHHhCCCCeEEEEECCCchHHHHHHHHHHHHcCCCCcEEEEeCCHHHHHHHHH-hCC-Ccc
Confidence            111123454 8999999999765422     2222   36788999999998 6789999999999999995 667 477


Q ss_pred             eEEEecCC--------CCcCCCC--CCCHHHHhhcHHHHHHhhce--ecCCCcceeecCCCCCCcCCCcHHHHHHHHcCC
Q 005894          149 LVFMVLEP--------NAVEPTT--NQTYGSILKNLTAIKSFASG--IVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGL  216 (671)
Q Consensus       149 ~v~~~~~~--------~~~~~~~--~~~y~~~~~~l~~i~~~a~~--i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl  216 (671)
                      +.+.+-..        ....+..  ..........-..++.+...  ........++.    .+.....++|+.+|++|+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~G~  262 (300)
T cd08612         187 LFFSLKRVLLLLLLYYTGLLPFIPIKESFLEIPMPSIFLKTYFPKSMSRLNRFVLFLI----DWLLMRPSLFRHLQKRGI  262 (300)
T ss_pred             EEechHHHHHHHHHHHcccCccccCccccccccchhhhhhhcccccccccccceeccc----ccccCCHHHHHHHHHCCC
Confidence            76532100        0000000  00000000000000000000  00000001110    122234689999999999


Q ss_pred             eEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894          217 QVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA  266 (671)
Q Consensus       217 ~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~  266 (671)
                      +|++||||++..            |+++++.|   ||||+||+|.....+
T Consensus       263 ~v~vWTVNd~~~------------~~~l~~~G---VdgIiTD~P~~l~~~  297 (300)
T cd08612         263 QVYGWVLNDEEE------------FERAFELG---ADGVMTDYPTKLREF  297 (300)
T ss_pred             EEEEeecCCHHH------------HHHHHhcC---CCEEEeCCHHHHHHH
Confidence            999999999854            89999999   999999999876543

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.

>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins

Probab=99.95  E-value=3e-27  Score=239.80  Aligned_cols=194  Identities=18%  Similarity=0.144  Sum_probs=142.3

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||+|||+||||++||+||.+|+|+||+                  +|. |.++|++||++++++        
T Consensus        23 A~~~Gad~iE~DV~lT~Dg~~Vv~HD~~l~R~t~~------------------~g~-v~~~t~~eL~~l~~~--------   75 (226)
T cd08568          23 AIEYGADGVELDVWLTKDGKLVVLHDENLKRVGGV------------------DLK-VKELTYKELKKLHPG--------   75 (226)
T ss_pred             HHHcCcCEEEEEEEEcCCCCEEEECCCcccccCCC------------------Cce-eecCCHHHHhhCCCC--------
Confidence            34457789999999999999999999999999999                  888 999999999999986        


Q ss_pred             cCCCCCCCCChhhhhHHHHHh------cC-ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceEEEecC
Q 005894           84 AFDNTQPIPTPDTIYDLFYSQ------HN-ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLE  155 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~~------~~-~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~  155 (671)
                          +++||||+||++.+...      .+ ....+.+++++++++ .++++++||++..|+.+++ ..| ..++.+.+..
T Consensus        76 ----g~~iPtL~evl~~~~~~~~l~iEiK~~~~~~~~~~~l~~~~~~~~v~i~SF~~~~l~~~~~-~~p-~~~~~~l~~~  149 (226)
T cd08568          76 ----GELIPTLEEVFRALPNDAIINVEIKDIDAVEPVLEIVEKFNALDRVIFSSFNHDALRELRK-LDP-DAKVGLLIGE  149 (226)
T ss_pred             ----CCcCCCHHHHHHhcCCCcEEEEEECCccHHHHHHHHHHHcCCCCcEEEEECCHHHHHHHHH-hCC-CCcEEEEeec
Confidence                68999999997765332      12 245678999999998 6799999999999999995 556 4777764422


Q ss_pred             CCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCC
Q 005894          156 PNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYN  234 (671)
Q Consensus       156 ~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~  234 (671)
                      ....     ....      ...+. .+.++.++...+. ..   .+. ...++|+.+|++|++|++||||++..      
T Consensus       150 ~~~~-----~~~~------~~~~~~~~~~~~~~~~~~~-~~---~~~-~~~~~v~~~~~~G~~v~~WTvn~~~~------  207 (226)
T cd08568         150 EEEG-----FSIP------ELHEKLKLYSLHVPIDAIG-YI---GFE-KFVELLRLLRKLGLKIVLWTVNDPEL------  207 (226)
T ss_pred             cccc-----cCHH------HHHHhcCCcEeccchhhhc-cc---ccc-ccHHHHHHHHHCCCEEEEEcCCCHHH------
Confidence            1110     0000      11111 1334444432220 00   111 12589999999999999999998754      


Q ss_pred             CChHHHHHHHhhcCceeeeeEeecCCCc
Q 005894          235 FEPEAEYLTFIDNSQFAVDGFITDFPTT  262 (671)
Q Consensus       235 ~d~~~e~~~~i~~g~~~Vdgv~td~p~~  262 (671)
                            ++++.+ +   ||||+||+|..
T Consensus       208 ------~~~l~~-~---vdgiiTD~p~~  225 (226)
T cd08568         208 ------VPKLKG-L---VDGVITDDVEK  225 (226)
T ss_pred             ------HHHHHh-h---CCEEEccCccc
Confidence                  667654 5   99999999975

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.

>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins

Probab=99.94  E-value=2.9e-27  Score=244.28  Aligned_cols=204  Identities=19%  Similarity=0.158  Sum_probs=146.2

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+|+||+                  +|. |.|+|++||++++++ .++....
T Consensus        22 A~~~Gad~iE~DV~lTkDg~~Vv~HD~~l~R~t~~------------------~g~-v~~~t~~el~~l~~~-~~~~~~~   81 (258)
T cd08573          22 AKKNGADGVEFDLEFTKDGVPVLMHDDTVDRTTDG------------------TGL-VAELTWEELRKLNAA-AKHRLSS   81 (258)
T ss_pred             HHHcCCCEEEEEeeECCCCcEEEECCCCcceecCC------------------Cce-EecCcHHHHhhCCCC-CCCCCcc
Confidence            34567889999999999999999999999999999                  888 999999999999998 4554334


Q ss_pred             cCCCCCCCCChhhhhHHHHH-h------cC---ccHHHHHHHHHHHcC--CceEEEeCCChHHHHHhhhhcCCCCcceEE
Q 005894           84 AFDNTQPIPTPDTIYDLFYS-Q------HN---ISAAKYITEYLQKLI--SNVYYISSPEIGFLKTMDRKVDHNTTKLVF  151 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~-~------~~---~~~~~~v~~~l~~~~--~~~~~isSf~~~~L~~i~~~~~~~~~~~v~  151 (671)
                      .|. +++||||+|+++.+.. .      .+   ..+++.+++++++++  .++++|+||++..|+.+++ ..| +.++.+
T Consensus        82 ~~~-~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~v~~~l~~~~~~~~~v~v~SF~~~~l~~~~~-~~p-~~~~g~  158 (258)
T cd08573          82 RFP-GEKIPTLEEAVKECLENNLRMIFDVKSNSSKLVDALKNLFKKYPGLYDKAIVCSFNPIVIYKVRK-ADP-KILTGL  158 (258)
T ss_pred             ccC-CCCCCCHHHHHHHHHhcCCEEEEEeCCCcHHHHHHHHHHHHHCCCccCCEEEEECCHHHHHHHHH-hCC-CceEEE
Confidence            566 7999999999765532 1      12   146678899999887  3689999999999999995 666 477775


Q ss_pred             EecCCCCcCCC----CCC---CHHHHhh-cHHHHH-----------HhhceecCCCcceeecCCCCCCcCCCcHHHHHHH
Q 005894          152 MVLEPNAVEPT----TNQ---TYGSILK-NLTAIK-----------SFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAH  212 (671)
Q Consensus       152 ~~~~~~~~~~~----~~~---~y~~~~~-~l~~i~-----------~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah  212 (671)
                      .+ ........    ..+   .+..... .+..+.           .-++++.+....+            ...+|+.+|
T Consensus       159 l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------~~~~v~~~~  225 (258)
T cd08573         159 TW-RPWFLSYTDDEGGPRRKSGWKHFLYSMLDVILEWSLHSWLPYFLGVSALLIHKDDI------------SSAYVRYWR  225 (258)
T ss_pred             ec-CcchhcccccccCcccchHHHHHHHHHHHHHHHHHHHhhhhhhcCeeEEEechHhc------------CHHHHHHHH
Confidence            43 11100000    001   0111100 011111           1133343333322            358999999


Q ss_pred             HcCCeEEEeeecCCcccCCCCCCChHHHHHHHhh-cCceeeeeEeecC
Q 005894          213 NAGLQVYASGFANDIYSSYSYNFEPEAEYLTFID-NSQFAVDGFITDF  259 (671)
Q Consensus       213 ~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~-~g~~~Vdgv~td~  259 (671)
                      ++|++|++||||++..            ++++++ .|   || ||||+
T Consensus       226 ~~G~~v~vWTVn~~~~------------~~~l~~~~G---Vd-iiTD~  257 (258)
T cd08573         226 ARGIRVIAWTVNTPTE------------KQYFAKTLN---VP-YITDS  257 (258)
T ss_pred             HCCCEEEEEecCCHHH------------HHHHHHHhC---CC-eecCC
Confidence            9999999999999854            889999 99   99 99996

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G

>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

Probab=99.94  E-value=6.9e-27  Score=238.30  Aligned_cols=196  Identities=18%  Similarity=0.179  Sum_probs=149.3

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+|+||+                  +|. +.++|++||++++++ .++.  .
T Consensus        22 A~~~G~~~vE~Dv~lTkDg~~Vv~HD~~l~r~t~~------------------~~~-i~~~t~~el~~l~~~-~~~~--~   79 (233)
T cd08582          22 AWEQGADGIETDVRLTKDGELVCVHDPTLKRTSGG------------------DGA-VSDLTLAELRKLDIG-SWKG--E   79 (233)
T ss_pred             HHHcCCCEEEEEEEEccCCCEEEecCCccccccCC------------------Ccc-hhhCCHHHHhcCCCC-cccC--C
Confidence            34567789999999999999999999999999999                  888 999999999999998 3433  3


Q ss_pred             cCCCCCCCCChhhhhHHHHH-hc------C-----ccHHHHHHHHHHHcC--CceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894           84 AFDNTQPIPTPDTIYDLFYS-QH------N-----ISAAKYITEYLQKLI--SNVYYISSPEIGFLKTMDRKVDHNTTKL  149 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~-~~------~-----~~~~~~v~~~l~~~~--~~~~~isSf~~~~L~~i~~~~~~~~~~~  149 (671)
                      .|. +++||||+|+++.+.. ..      +     ..+.+.+++++++++  .++++++||++..|+.+++ ..| +.++
T Consensus        80 ~~~-~~~iptL~evl~~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Sf~~~~l~~~~~-~~p-~~~~  156 (233)
T cd08582          80 SYK-GEKVPTLEEYLAIVPKYGKKLFIEIKHPRRGPEAEEELLKLLKESGLLPEQIVIISFDAEALKRVRE-LAP-TLET  156 (233)
T ss_pred             CCC-CCcCCCHHHHHHHHHhcCceEEEEeCCCccCccHHHHHHHHHHHcCCCCCCEEEEecCHHHHHHHHH-HCC-CCcE
Confidence            454 7999999999765533 11      2     246788999999995  5899999999999999995 556 4777


Q ss_pred             EEEecCCCCcCCCCCCCHHHHhhcHHHHH-HhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcc
Q 005894          150 VFMVLEPNAVEPTTNQTYGSILKNLTAIK-SFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIY  228 (671)
Q Consensus       150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~-~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~  228 (671)
                      .|.........  ..   .      ..++ ..+.++.+....  +         ...++|+.+|++|++|++||||++..
T Consensus       157 ~~l~~~~~~~~--~~---~------~~~~~~~~~~i~~~~~~--~---------~~~~~v~~~~~~G~~v~~wTvn~~~~  214 (233)
T cd08582         157 LWLRNYKSPKE--DP---R------PLAKSGGAAGLDLSYEK--K---------LNPAFIKALRDAGLKLNVWTVDDAED  214 (233)
T ss_pred             EEEeccCcccc--ch---h------HHHHhhCceEEcccccc--c---------CCHHHHHHHHHCCCEEEEEeCCCHHH
Confidence            77532211000  00   0      0111 225666654332  1         12589999999999999999998854


Q ss_pred             cCCCCCCChHHHHHHHhhcCceeeeeEeecCCC
Q 005894          229 SSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPT  261 (671)
Q Consensus       229 ~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~  261 (671)
                                  ++++++.|   ||||+||+|.
T Consensus       215 ------------~~~l~~~G---Vdgi~TD~p~  232 (233)
T cd08582         215 ------------AKRLIELG---VDSITTNRPG  232 (233)
T ss_pred             ------------HHHHHHCC---CCEEEcCCCC
Confidence                        88999999   9999999996

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins

Probab=99.94  E-value=3.6e-26  Score=238.35  Aligned_cols=236  Identities=14%  Similarity=0.123  Sum_probs=173.9

Q ss_pred             hHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccccccCCHHHHhccCCCcC
Q 005894          286 TDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQIS  365 (671)
Q Consensus       286 Tl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~dlT~~EL~~L~~~~~  365 (671)
                      ...+|..|.++|||+||+|||+||||+|||+||.++.|+ +                 +.+ .|.++||+||++++.+. 
T Consensus        17 ~~~sfvtAsslgad~VE~DVqLTkDgvpVV~HD~~i~~t-~-----------------~~~-~V~dlTleqL~~l~~~~-   76 (300)
T cd08578          17 DGNSFVTASSLSGEYLRVKVCVLKDGTPVVAPEWFVPVG-G-----------------IKL-LVSDLTAEQLESILDYS-   76 (300)
T ss_pred             CchhHHHHHHcCCCEEEEEEEECcCCEEEEECCCceEec-C-----------------CcE-EeecCcHHHHhccCCcc-
Confidence            467999999999999999999999999999999999665 4                 455 89999999999998762 


Q ss_pred             CCCCCCCCCCCCC---cccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhc----------CCcHHHHHHHHHH
Q 005894          366 SPFDKSNPPIIRN---PEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKK----------GLGVVDAVTKALS  432 (671)
Q Consensus       366 ~~f~~~~~~~~r~---~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~----------~~~~~~~v~~~l~  432 (671)
                       +++... .....   ..+ .++++|||+|+|+.++..  ++++||||.+.......          -..+++.+++.+-
T Consensus        77 -~~~~~~-~~~~~~~~~~~-~~~~~pTL~evL~~lp~~--iglNIEIK~P~~~e~~~~~~~~~~~~d~N~fvD~IL~~Vf  151 (300)
T cd08578          77 -LDDLNS-EISDMVDLKRL-LSSRVVSLETLLELLPPS--IQLDIQVLFPTAAEIASIPVKGSPLVDLNKFIDTVLLVVF  151 (300)
T ss_pred             -cccccc-cccccchhhhh-cCCcCCCHHHHHHhhccC--CeEEEEECCCChHHhhhccccccchhHHHHHHHHHHHHHH
Confidence             222100 00000   011 257899999999999775  79999999887642111          1247788888876


Q ss_pred             hcCCC----CCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecc--------------------------cCCCChhHH
Q 005894          433 NATFD----KQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKE--------------------------VSAAPREVV  481 (671)
Q Consensus       433 ~~~~~----~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~--------------------------~~d~~~~~l  481 (671)
                      ++...    ....++|+|+|||++++..++.+ |.||+.|++...                          ..|.+...+
T Consensus       152 ~har~~~~~~~~~R~IiFSSf~pdiC~~L~~KQp~yPV~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~Si  231 (300)
T cd08578         152 DHARYLRHTPGSTRSIVFSSCNPEVCTILNWKQPNFPVFFAMNGLVRNNDTLSFDTPHHLDSLAVDPQKLNEADPRSRSI  231 (300)
T ss_pred             HHhhhhcccCCCCCceEEeeCCHHHHHHHHhcCCCCCEEEEecCCccccccccccccccccccccccccccccCchhhhH
Confidence            65321    01127999999999999999988 999999988764                          233455678


Q ss_pred             HHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEE
Q 005894          482 EEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITT  561 (671)
Q Consensus       482 ~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiT  561 (671)
                      ++..+||...++-  .+.... ..+...+.+|+.+|++||.+.+|+-..+.              ........||||++.
T Consensus       232 ~~Av~fA~~~nL~--Giv~~~-~~L~~~P~lV~~ik~~GL~lv~~g~~~~~--------------~~~~~~~~~vnG~~~  294 (300)
T cd08578         232 KEAVRFAKNNNLL--GLILPY-SLLNIVPQLVESIKSRGLLLIASGEPESL--------------IEVAEAGDGINGVVT  294 (300)
T ss_pred             HHHHHHHHHcCCc--EEEecH-HHHhhChHHHHHHHHcCCEEEEECCCCcc--------------ccccccccCCceEEe
Confidence            8888999877663  333332 12456789999999999999999976432              111224789999999


Q ss_pred             CC
Q 005894          562 EF  563 (671)
Q Consensus       562 D~  563 (671)
                      +.
T Consensus       295 ~~  296 (300)
T cd08578         295 ED  296 (300)
T ss_pred             CC
Confidence            86

This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos

>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins

Probab=99.94  E-value=6.2e-27  Score=238.62  Aligned_cols=196  Identities=20%  Similarity=0.162  Sum_probs=144.1

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||+|||+||||++||+||.+|+|+|++                  +|. |.++|++||++++++. |+    
T Consensus        22 A~~~G~d~iE~DV~~TkDg~~Vv~HD~~l~r~t~~------------------~g~-v~~~t~~el~~l~~~~-~~----   77 (235)
T cd08565          22 ALELGVDAVEFDVHLTADGEVVVIHDPTLDRTTHG------------------TGA-VRDLTLAERKALRLRD-SF----   77 (235)
T ss_pred             HHHcCCCEEEEeEEEccCCCEEEECCChhhcccCC------------------CCc-eeeccHHHHhcCCCCC-CC----
Confidence            34556779999999999999999999999999999                  888 9999999999999983 32    


Q ss_pred             cCCCCCCCCChhhhhHHHHH-h------cCc--------cHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCc
Q 005894           84 AFDNTQPIPTPDTIYDLFYS-Q------HNI--------SAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTT  147 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~-~------~~~--------~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~  147 (671)
                          +++||||+|+++.+.. .      .+.        .+++.+++++++++ .++++++||++..|+.+++ . | ..
T Consensus        78 ----~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~i~~~~~~~~v~~~Sf~~~~l~~~~~-~-p-~~  150 (235)
T cd08565          78 ----GEKIPTLEEVLALFAPSGLELHVEIKTDADGTPYPGAAALAAATLRRHGLLERSVLTSFDPAVLTEVRK-H-P-GV  150 (235)
T ss_pred             ----CCCCCCHHHHHHHhhccCcEEEEEECCCCCCCccHHHHHHHHHHHHhCCCcCCEEEEECCHHHHHHHHh-C-C-CC
Confidence                5899999999776532 1      121        36678899999988 5789999999999999995 5 6 48


Q ss_pred             ceEEEecCCCCcCCCCCCCHHHHhhcHHHH-HHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCC
Q 005894          148 KLVFMVLEPNAVEPTTNQTYGSILKNLTAI-KSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAND  226 (671)
Q Consensus       148 ~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i-~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~  226 (671)
                      ++.+.+. .........  +.    .+... +..+.++.++..+.          .....+|+.+|+ |++|++||||++
T Consensus       151 ~~~~l~~-~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-g~~v~~WTVn~~  212 (235)
T cd08565         151 RTLGSVD-EDMLERLGG--EL----PFLTATALKAHIVAVEQSLL----------AATWELVRAAVP-GLRLGVWTVNDD  212 (235)
T ss_pred             cEEEEec-ccccccccc--cc----chhhhhhccCcEEccCcccc----------cCCHHHHHHHhC-CCEEEEEccCCH
Confidence            8876432 111100000  00    00111 12244444443321          112578999974 999999999987


Q ss_pred             cccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcc
Q 005894          227 IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTA  263 (671)
Q Consensus       227 ~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~  263 (671)
                      ..            ++++++.|   ||||+||+|..+
T Consensus       213 ~~------------~~~l~~~G---VdgIiTD~P~~~  234 (235)
T cd08565         213 SL------------IRYWLACG---VRQLTTDRPDLA  234 (235)
T ss_pred             HH------------HHHHHHcC---CCEEEeCCcccc
Confidence            55            88999999   999999999863

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins

Probab=99.94  E-value=1.3e-26  Score=235.79  Aligned_cols=192  Identities=21%  Similarity=0.271  Sum_probs=146.5

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +.-.+..+||||||+||||++||+||.+|+|+||+                  +|. +.++|++||+++++++. ++  +
T Consensus        24 A~~~g~~~vE~DV~~TkDg~~Vv~HD~~l~r~t~~------------------~~~-i~~~t~~el~~l~~~~~-~~--~   81 (230)
T cd08563          24 AIEAGADGIELDVHLTKDGQLVVIHDETVDRTTNG------------------KGY-VKDLTLEELKKLDAGSW-FD--E   81 (230)
T ss_pred             HHHcCCCEEEEEeeEcCCCCEEEECCCCcccccCC------------------CCc-hhhCCHHHHHhcCCCCc-cC--c
Confidence            34456779999999999999999999999999999                  788 99999999999999843 32  2


Q ss_pred             cCCCCCCCCChhhhhHHHHHh-c------C------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894           84 AFDNTQPIPTPDTIYDLFYSQ-H------N------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKL  149 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~~-~------~------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~  149 (671)
                      .+. +++||||+|++..+... .      +      .++++.+++++++++ .++++++||+...|+.+++ ..| ..++
T Consensus        82 ~~~-~~~iptL~evl~~~~~~~~~l~leiK~~~~~~~~~~~~l~~~l~~~~~~~~v~~~Sf~~~~l~~~~~-~~p-~~~~  158 (230)
T cd08563          82 KFT-GEKIPTLEEVLDLLKDKDLLLNIEIKTDVIHYPGIEKKVLELVKEYNLEDRVIFSSFNHESLKRLKK-LDP-KIKL  158 (230)
T ss_pred             cCC-CCcCCCHHHHHHHHHhcCcEEEEEECCCCCcChhHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHH-HCC-CCcE
Confidence            343 68999999997755421 1      2      246788999999998 6899999999999999995 556 4777


Q ss_pred             EEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcc
Q 005894          150 VFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIY  228 (671)
Q Consensus       150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~  228 (671)
                      .+.+... . .     .      ...+++.. +.++.+....+            ..++++.+|++|++|++||||++..
T Consensus       159 ~~l~~~~-~-~-----~------~~~~~~~~~~~~v~~~~~~~------------~~~~i~~~~~~g~~v~~Wtvn~~~~  213 (230)
T cd08563         159 ALLYETG-L-Q-----D------PKDYAKKIGADSLHPDFKLL------------TEEVVEELKKRGIPVRLWTVNEEED  213 (230)
T ss_pred             EEEecCc-c-c-----C------HHHHHHHhCCEEEccCchhc------------CHHHHHHHHHCCCEEEEEecCCHHH
Confidence            7643211 0 0     0      01222221 34555443332            3589999999999999999998754


Q ss_pred             cCCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          229 SSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       229 ~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                                  ++++++.|   ||||+||+|
T Consensus       214 ------------~~~~~~~G---Vdgi~TD~P  230 (230)
T cd08563         214 ------------MKRLKDLG---VDGIITNYP  230 (230)
T ss_pred             ------------HHHHHHCC---CCEEeCCCC
Confidence                        88999999   999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.

>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

Probab=99.94  E-value=1.2e-26  Score=234.55  Aligned_cols=185  Identities=20%  Similarity=0.255  Sum_probs=143.4

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+|+||+                  +|. +.++|++||+++++++ +     
T Consensus        22 A~~~Gad~vE~DV~~T~Dg~~vv~HD~~l~r~t~~------------------~~~-v~~~t~~el~~l~~~~-~-----   76 (220)
T cd08579          22 AIKAKPDYVEIDVQETKDGQFVVMHDANLKRLAGV------------------NKK-VWDLTLEELKKLTIGE-N-----   76 (220)
T ss_pred             HHHcCCCEEEEEeeEcCCCCEEEEcCCchhhccCC------------------CCC-hhhCCHHHHhcCcCcc-C-----
Confidence            33457779999999999999999999999999999                  787 9999999999999983 2     


Q ss_pred             cCCCCCCCCChhhhhHHHHH-hc------C------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894           84 AFDNTQPIPTPDTIYDLFYS-QH------N------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKL  149 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~-~~------~------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~  149 (671)
                       |. +++||||+|+++.+.. ..      +      ..+.+.+++++++++ .++++|+||+...++.+++ ..| +.++
T Consensus        77 -~~-~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~v~v~Sf~~~~l~~~~~-~~p-~~~~  152 (220)
T cd08579          77 -GH-GAKIPSLDEYLALAKGLKQKLLIELKPHGHDSPDLVEKFVKLYKQNLIENQHQVHSLDYRVIEKVKK-LDP-KIKT  152 (220)
T ss_pred             -CC-CCcCCCHHHHHHHhhccCCeEEEEECCCCCCCHHHHHHHHHHHHHcCCCcCeEEEeCCHHHHHHHHH-HCC-CCeE
Confidence             22 6899999999776543 21      1      136778899999988 5789999999999999985 556 4777


Q ss_pred             EEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCccc
Q 005894          150 VFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYS  229 (671)
Q Consensus       150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~  229 (671)
                      .+..... . .            .+  ....++++.+....+            ..++|+.+|++|++|++||||++.  
T Consensus       153 ~~~~~~~-~-~------------~~--~~~~~~~~~~~~~~~------------~~~~v~~~~~~G~~v~~wtvn~~~--  202 (220)
T cd08579         153 GYILPFN-I-G------------NL--PKTNVDFYSIEYSTL------------NKEFIRQAHQNGKKVYVWTVNDPD--  202 (220)
T ss_pred             EEEEecc-c-C------------cc--cccCceEEeeehhhc------------CHHHHHHHHHCCCEEEEEcCCCHH--
Confidence            7643211 0 0            00  012245555443322            258999999999999999999874  


Q ss_pred             CCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          230 SYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       230 ~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                                ++..++++|   ||||+||+|
T Consensus       203 ----------~~~~~~~~G---vd~i~TD~P  220 (220)
T cd08579         203 ----------DMQRYLAMG---VDGIITDYP  220 (220)
T ss_pred             ----------HHHHHHHcC---CCEEeCCCC
Confidence                      488999999   999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.

>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins

Probab=99.94  E-value=1.2e-26  Score=244.57  Aligned_cols=202  Identities=14%  Similarity=0.111  Sum_probs=144.3

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCC
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRS   82 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~   82 (671)
                      .+...|..+||||||+||||++||+||.+|+||||+...++++.          . +.|.|+|++||++++++ +||...
T Consensus        49 ~Ai~~GaD~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~g~~~~~~----------~-~~V~dlTlaEL~~ld~g-~wf~~~  116 (315)
T cd08609          49 KSLECGVVVFETDVMVSKDGVPFLMHDEGLLRTTNVKDVFPGRD----------A-AGSNNFTWTELKTLNAG-SWFLER  116 (315)
T ss_pred             HHHHcCCCEEEEEEEECCCCCEEEeCCCcccccCCCCCCccccc----------c-ccHhhCCHHHHhhCCCC-cccCcc
Confidence            34456788999999999999999999999999999933222211          1 13899999999999998 666421


Q ss_pred             c--------------cCCCCCCCCChhhhhHHHHH-------hcC---------ccHHHHHHHHHHHcCC--ceEEEeCC
Q 005894           83 E--------------AFDNTQPIPTPDTIYDLFYS-------QHN---------ISAAKYITEYLQKLIS--NVYYISSP  130 (671)
Q Consensus        83 ~--------------~f~~~~~IptL~ev~~~~~~-------~~~---------~~~~~~v~~~l~~~~~--~~~~isSf  130 (671)
                      .              .| .+++||||+|+++.+..       |.+         .+++..+++++++++.  .++++  +
T Consensus       117 ~~~~~~~~~~~~~~~~~-~ge~IPTL~EvL~~~~~~~~~l~IEIK~~~~~~~~~~~f~~~vl~~i~~~~~~~~~v~~--~  193 (315)
T cd08609         117 RPFWTLSSLSEEDRREA-DNQTVPSLSELLDLAKKHNVSIMFDLRNENNSHVFYSSFVFYTLETILKLGIPPDKVWW--L  193 (315)
T ss_pred             ccccccccccccccccc-CCCCCCCHHHHHHHHHhcCCEEEEEeCCCCCCCccHHHHHHHHHHHHHHcCCCcceEEE--e
Confidence            1              12 37999999999665422       222         1356788899999882  33333  4


Q ss_pred             ChHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHH
Q 005894          131 EIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTD  210 (671)
Q Consensus       131 ~~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~  210 (671)
                      +...|+.+++ ..| ..++++...                   ....+..+.++++....+            ...+|+.
T Consensus       194 ~~~~l~~~~~-~~P-~~~~~~~~~-------------------~~~~~~~~~~i~~~~~~l------------~~~~v~~  240 (315)
T cd08609         194 PDEYRHDVMK-MEP-GFKQVYGRQ-------------------KEMLMDGGNFMNLPYQDL------------SALEIKE  240 (315)
T ss_pred             CHHHHHHHHH-hCc-Cceeecccc-------------------hhhHhcCCeEEecccccC------------CHHHHHH
Confidence            6888999984 556 366654210                   000112244555443333            2589999


Q ss_pred             HHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          211 AHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       211 ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      +|++|++|++||||++..            ++++++.|   ||||+||+|......+
T Consensus       241 ~~~~G~~v~vWTVNd~~~------------~~~l~~~G---VDgIiTD~P~~l~~~~  282 (315)
T cd08609         241 LRKDNVSVNLWVVNEPWL------------FSLLWCSG---VSSVTTNACQLLKDMS  282 (315)
T ss_pred             HHHCCCEEEEECCCCHHH------------HHHHHhcC---CCEEEcCCHHHHHHhh
Confidence            999999999999998855            89999999   9999999999877644

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia

>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins

Probab=99.94  E-value=1.1e-26  Score=241.07  Aligned_cols=216  Identities=20%  Similarity=0.186  Sum_probs=143.5

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCC-
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRS-   82 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~-   82 (671)
                      +...+..+||||||+||||++||+||.+|+|+||+                  +|. +.++|++||++++++. ++... 
T Consensus        24 A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~------------------~~~-v~~~t~~el~~l~~~~-~~~~~~   83 (264)
T cd08575          24 AVKNGADMLELDVQLTKDGQVVVFHDWDLDRLTGG------------------SGL-VSDLTYAELPPLDAGY-GYTFDG   83 (264)
T ss_pred             HHHcCCCEEEEEEEECCCCCEEEEcCCcccceeCC------------------ceE-EecCCHHHHHhcccCC-ccccCC
Confidence            44567789999999999999999999999999999                  788 9999999999999983 43211 


Q ss_pred             ------ccCCCCCCCCChhhhhHHHHH-----hcC----ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCC
Q 005894           83 ------EAFDNTQPIPTPDTIYDLFYS-----QHN----ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNT  146 (671)
Q Consensus        83 ------~~f~~~~~IptL~ev~~~~~~-----~~~----~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~  146 (671)
                            ..| .+++||||+|+++.+..     +.+    ..+++.+++++++++ .++++++||++..|+++++ ..| +
T Consensus        84 ~~~~~~~~~-~~~~iptL~evl~~~~~~~l~iEiK~~~~~~~~~~v~~~i~~~~~~~~~~~~Sf~~~~l~~~~~-~~p-~  160 (264)
T cd08575          84 GKTGYPRGG-GDGRIPTLEEVFKAFPDTPINIDIKSPDAEELIAAVLDLLEKYKREDRTVWGSTNPEYLRALHP-ENP-N  160 (264)
T ss_pred             CCcccccCC-CCCcCCcHHHHHHhCCCCeEEEEECCCCHHHHHHHHHHHHHhccccceEEEEeCCHHHHHHHHH-hCc-c
Confidence                  112 37899999999765422     122    236788999999998 6789999999999999995 555 3


Q ss_pred             cceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCccee-------ecCCCCCCcCCCcHHHHHHHHcCCeEE
Q 005894          147 TKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYII-------PVNNKTRYLEPATTLVTDAHNAGLQVY  219 (671)
Q Consensus       147 ~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~-------p~~~~~~y~~~~~~~V~~ah~~Gl~V~  219 (671)
                      .++.+.+...-.......  +..... ....+..+.++.+....+.       -..  -.|.....++|+.+|++|++|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~G~~v~  235 (264)
T cd08575         161 LFESFSMTRCLLLYLALG--YTGLLP-FVPIKESFFEIPRPVIVLETFTLGEGASI--VAALLWWPNLFDHLRKRGIQVY  235 (264)
T ss_pred             cccccCchhHHHHHHHhh--eeccCC-CCCCCceEEEeecccEEEEEeccccccch--hhhhhcCHHHHHHHHhcCCcEE
Confidence            444432100000000000  000000 0000000111111110000       000  0222334689999999999999


Q ss_pred             EeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCc
Q 005894          220 ASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTT  262 (671)
Q Consensus       220 ~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~  262 (671)
                      +||||++..            ++++++.|   ||||+||+|..
T Consensus       236 vWTVNd~~~------------~~~l~~~G---VdgIiTD~P~~  263 (264)
T cd08575         236 LWVLNDEED------------FEEAFDLG---ADGVMTDSPTK  263 (264)
T ss_pred             EEEECCHHH------------HHHHHhcC---CCEEEeCCccc
Confidence            999999855            88999999   99999999975

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.

>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins

Probab=99.94  E-value=1.6e-26  Score=245.98  Aligned_cols=203  Identities=12%  Similarity=0.064  Sum_probs=145.2

Q ss_pred             cccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC
Q 005894            2 AKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR   81 (671)
Q Consensus         2 ~~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r   81 (671)
                      ..+...+..+||||||+||||++||+||.+|+||||+...+++++.+           .+.++||+||++++++ .||..
T Consensus        23 ~~A~~~GaD~IElDV~lTkDGvlVV~HD~tL~RtTn~~g~v~~~~~~-----------~~~~~TlaEL~~LdaG-~wf~~   90 (351)
T cd08608          23 QKALEQKVYGLQADVTISLDGVPFLMHDRTLRRTTNVDRVFPERQYE-----------DASMFNWTDLERLNAG-QWFLK   90 (351)
T ss_pred             HHHHHcCCCEEEEEeeEccCCcEEEECCCccccccCCCCcccccccc-----------ccccCCHHHHhhCCCC-ccccc
Confidence            34456688899999999999999999999999999995555554421           2679999999999999 56642


Q ss_pred             C--------------ccCCCCCCCCChhhhhHHHHH-------hcC---------ccHHHHHHHHHHHcC--CceEEEeC
Q 005894           82 S--------------EAFDNTQPIPTPDTIYDLFYS-------QHN---------ISAAKYITEYLQKLI--SNVYYISS  129 (671)
Q Consensus        82 ~--------------~~f~~~~~IptL~ev~~~~~~-------~~~---------~~~~~~v~~~l~~~~--~~~~~isS  129 (671)
                      .              ..|. +++||||+||++.+..       +++         ..+++.+++++++++  .++++++|
T Consensus        91 ~~p~~~~~~~~~~~~~~~~-ge~IPTL~EvL~~~~~~~~~l~iEIK~~~~~~~~~~~~~~~v~~~i~~~~~~~~~vi~sS  169 (351)
T cd08608          91 DDPFWTAQSLSPSDRKEAG-NQSVCSLAELLELAKRYNASVLLNLRRPPPNHPYHQSWINLTLKTILASGIPQEQVMWTP  169 (351)
T ss_pred             CCccccccccccccccccC-CCCCCCHHHHHHHHHhcCCeEEEEECCCcccCcchhHHHHHHHHHHHHhCCCcCeEEEEc
Confidence            1              1333 7999999999765432       112         134567788888877  25677788


Q ss_pred             CChHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHH
Q 005894          130 PEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLV  208 (671)
Q Consensus       130 f~~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V  208 (671)
                      |+.  ++.++ +..|. .++..  ...               ..+..++. -++++++....+            ..++|
T Consensus       170 f~~--~~~vr-~l~P~-~~~~~--~~~---------------~~~~~~~~~~~~~l~~~~~~l------------t~~~v  216 (351)
T cd08608         170 DWQ--RKLVR-KVAPG-FQQTS--GEK---------------LPVASLRERGITRLNLRYTQA------------SAQEI  216 (351)
T ss_pred             chH--HHHHH-HHCCC-Ceeec--ccc---------------chHHHHHHcCCeEEccchhhc------------CHHHH
Confidence            866  46777 46663 54321  000               00112221 245565554433            25899


Q ss_pred             HHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          209 TDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       209 ~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                      +.+|++|++|++||||++..            |+.+++.|   ||||+||+|.....
T Consensus       217 ~~~~~~Gl~V~vWTVN~~~~------------~~~l~~~G---VdgIiTD~P~~l~~  258 (351)
T cd08608         217 RDYSASNLSVNLYTVNEPWL------------YSLLWCSG---VPSVTSDASHVLRK  258 (351)
T ss_pred             HHHHHCCCEEEEEecCCHHH------------HHHHHHCC---CCEEEECCHHHHHH
Confidence            99999999999999999855            88999999   99999999998776

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti

>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5

Probab=99.94  E-value=9.5e-27  Score=243.97  Aligned_cols=211  Identities=16%  Similarity=0.113  Sum_probs=143.7

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccC--
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYT--   80 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~--   80 (671)
                      .+...+..+||+|||+||||++||+||.+|+|+||+.               ..+|. |.|+|++||++++++. |+.  
T Consensus        33 ~A~~~Gad~vE~DV~lTkDg~~VV~HD~~l~r~~~g~---------------~~~~~-V~dlT~~EL~~ld~~~-~~~~~   95 (282)
T cd08605          33 AASKFGADFVEFDVQVTRDGVPVIWHDDFIVVERGGE---------------VESSR-IRDLTLAELKALGPQA-ESTKT   95 (282)
T ss_pred             HHHHcCCCEEEEEEEECcCCeEEEECCCceecccCCC---------------cCccc-hhhCcHHHHHhccccc-ccccc
Confidence            4456788999999999999999999999999999851               11566 9999999999999973 321  


Q ss_pred             ---------CCcc----C-CCCCCCCChhhhhHHHHH------hcCcc------------HHHHHHHHHHHcC-CceEEE
Q 005894           81 ---------RSEA----F-DNTQPIPTPDTIYDLFYS------QHNIS------------AAKYITEYLQKLI-SNVYYI  127 (671)
Q Consensus        81 ---------r~~~----f-~~~~~IptL~ev~~~~~~------~~~~~------------~~~~v~~~l~~~~-~~~~~i  127 (671)
                               ..+.    + +.+++||||+||++.+..      |.+..            +.+.+++++++++ .++++|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~~~l~IEiK~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~vii  175 (282)
T cd08605          96 STVALYRKAKDPEPEPWIMDVEDSIPTLEEVFSEVPPSLGFNIELKFGDDNKTEAEELVRELRAILAVCKQHAPGRRIMF  175 (282)
T ss_pred             CcchhhccccccccccccccccCCCCCHHHHHHhCCCCccEEEEEecCccccchHHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence                     0010    1 136899999999664422      22211            2356788888887 578999


Q ss_pred             eCCChHHHHHhhhhcCCCCcceEEEecCCC-CcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCc
Q 005894          128 SSPEIGFLKTMDRKVDHNTTKLVFMVLEPN-AVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPAT  205 (671)
Q Consensus       128 sSf~~~~L~~i~~~~~~~~~~~v~~~~~~~-~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~  205 (671)
                      +||++..|+.+++ ..| ..++.+.+.... .........+..   ....++. .+.++.++...+          ....
T Consensus       176 sSF~~~~l~~l~~-~~p-~~~~~~L~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l----------~~~~  240 (282)
T cd08605         176 SSFDPDAAVLLRA-LQS-LYPVMFLTDCGPYTHNDPRRNSIEA---AIQVALEGGLQGIVSEVKVL----------LRNP  240 (282)
T ss_pred             EeCCHHHHHHHHh-cCc-cCCEEEEecCCCccccCchhhhHHH---HHHHHHHcCCceEEecHHHh----------hcCc
Confidence            9999999999994 667 488887542110 000000000111   1111122 245555443321          1125


Q ss_pred             HHHHHHHHcCCeEEEeee--cCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          206 TLVTDAHNAGLQVYASGF--ANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       206 ~~V~~ah~~Gl~V~~wtv--~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                      ++|+.||++|++|++|||  |++..            ++++++.|   |||||||++
T Consensus       241 ~~v~~~~~~Gl~v~vWTv~~n~~~~------------~~~l~~~G---VdgIiTD~~  282 (282)
T cd08605         241 TAVSLVKASGLELGTYGKLNNDAEA------------VERQADLG---VDGVIVDHV  282 (282)
T ss_pred             HHHHHHHHcCcEEEEeCCCCCCHHH------------HHHHHHcC---CCEEEeCCC
Confidence            899999999999999999  76644            88999999   999999985

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.

>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins

Probab=99.93  E-value=4.9e-26  Score=239.63  Aligned_cols=220  Identities=15%  Similarity=0.136  Sum_probs=144.8

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccc--cccC
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQ--NVYT   80 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~--~~~~   80 (671)
                      .+...+..+||||||+||||++||+||.+|+|+|++....++...        .++. |.|+|++||++++++.  .|+.
T Consensus        29 ~A~~~Gad~iE~DV~lTkDg~~VV~HD~~l~r~~~~~~~~~~~~~--------~~~~-v~~lt~~eL~~l~~~~~~~~~~   99 (290)
T cd08607          29 QAAEHGADMVEFDVQLTKDLVPVVYHDFTLRVSLKSKGDSDRDDL--------LEVP-VKDLTYEQLKLLKLFHISALKV   99 (290)
T ss_pred             HHHHcCCCEEEEEEEEccCCeEEEEcCCeeEeeccCccccCccce--------EEEe-cccCCHHHHhhcCccccccccc
Confidence            445678889999999999999999999999999998322222111        1234 9999999999999973  2332


Q ss_pred             CCccCC---------CCCCCCChhhhhHHHHH------hcCc--------------------cHHHHHHHHHHHcC-Cce
Q 005894           81 RSEAFD---------NTQPIPTPDTIYDLFYS------QHNI--------------------SAAKYITEYLQKLI-SNV  124 (671)
Q Consensus        81 r~~~f~---------~~~~IptL~ev~~~~~~------~~~~--------------------~~~~~v~~~l~~~~-~~~  124 (671)
                        ..|.         .+++||||+||++.+..      |.+.                    .+++.+++++++++ .++
T Consensus       100 --~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~~~lnIEiK~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~  177 (290)
T cd08607         100 --KEYKSVEEDEDPPEHQPFPTLSDVLESVPEDVGFNIEIKWPQQQKDGSWESELFTYFDRNLFVDIILKIVLEHAGKRR  177 (290)
T ss_pred             --ccccccccccccccccCCCCHHHHHHhCCCccceEEEEecCccccccccccccccccchhHHHHHHHHHHHHhCCCCC
Confidence              2222         26899999999654321      2221                    14567888888876 568


Q ss_pred             EEEeCCChHHHHHhhhhcCCCCcceEEEecCCCC-cCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcC
Q 005894          125 YYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNA-VEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLE  202 (671)
Q Consensus       125 ~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~~-~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~  202 (671)
                      ++|+||++..|+.++. ..| ..++.+.+..... ..+........+...+.+.+.. +.|+.++..+          +.
T Consensus       178 v~isSF~~~~l~~~~~-~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~  245 (290)
T cd08607         178 IIFSSFDADICTMLRF-KQN-KYPVLFLTQGKTQRYPEFMDLRTRTFEIAVNFAQAEELLGVNLHSED----------LL  245 (290)
T ss_pred             EEEEcCCHHHHHHHHH-hCc-CCCEEEEecCCCCccccccchHHHhHHHHHHHHHHcCCceeEechhh----------hh
Confidence            9999999999999995 556 4787765422110 0000000000111111111111 2334333222          22


Q ss_pred             CCcHHHHHHHHcCCeEEEeee--cCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          203 PATTLVTDAHNAGLQVYASGF--ANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       203 ~~~~~V~~ah~~Gl~V~~wtv--~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                      ...++|+.+|++|++|++|||  |++.            +++++++.|   ||||+||++
T Consensus       246 ~~~~~v~~~~~~Gl~v~~wTv~~n~~~------------~~~~l~~~G---VdgIiTD~~  290 (290)
T cd08607         246 KDPSQIELAKSLGLVVFCWGDDLNDPE------------NRKKLKELG---VDGLIYDRI  290 (290)
T ss_pred             cChHHHHHHHHcCCEEEEECCCCCCHH------------HHHHHHHcC---CCEEEecCC
Confidence            235899999999999999999  6654            488999999   999999975

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.

>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins

Probab=99.93  E-value=3.7e-26  Score=237.37  Aligned_cols=206  Identities=15%  Similarity=0.142  Sum_probs=148.5

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccc--------cccccccccccccccccCCcccccccccccCHHHHcccccc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNN--------ITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLV   75 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~Ldr--------tT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~   75 (671)
                      +...+..+||+|||+||||++||+||.+++|        ++++                  +|. |.|+|++||++++++
T Consensus        29 A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~~~~~~~~~~~~~------------------~~~-v~~~t~~el~~l~~~   89 (265)
T cd08564          29 ALEIGVDGVELDVFLTKDNEIVVFHGTEDDTNPDTSIQLDDSG------------------FKN-INDLSLDEITRLHFK   89 (265)
T ss_pred             HHHcCCCEEEEeeEECCCCCEEEEcCCccccCccccccccCCC------------------ccc-hhhCcHHHHhhcccC
Confidence            3446778999999999999999999987665        6666                  777 999999999999998


Q ss_pred             ccccCCCccC---CCCCCCCChhhhhHHHHHhc------C---ccHHHHHHHHHHHcC-CceEEEeCCCh-HHHHHhhhh
Q 005894           76 QNVYTRSEAF---DNTQPIPTPDTIYDLFYSQH------N---ISAAKYITEYLQKLI-SNVYYISSPEI-GFLKTMDRK  141 (671)
Q Consensus        76 ~~~~~r~~~f---~~~~~IptL~ev~~~~~~~~------~---~~~~~~v~~~l~~~~-~~~~~isSf~~-~~L~~i~~~  141 (671)
                       .|+.....+   ..+++||||+||++.+....      +   ..+++.+++++++++ .++++|+||++ +.|+.+++ 
T Consensus        90 -~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~l~iEiK~~~~~~~~~v~~~l~~~~~~~~v~i~SF~~~~~l~~~~~-  167 (265)
T cd08564          90 -QLFDEKPCGADEIKGEKIPTLEDVLVTFKDKLKYNIELKGREVGLGERVLNLVEKYGMILQVHFSSFLHYDRLDLLKA-  167 (265)
T ss_pred             -cccccCcccccccCCccCCCHHHHHHHhccCcEEEEEeCCCchhHHHHHHHHHHHcCCCCCEEEEecCchhHHHHHHH-
Confidence             455321111   14799999999977653322      2   257789999999998 57999999999 99999985 


Q ss_pred             cCCCC--cceEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeE
Q 005894          142 VDHNT--TKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQV  218 (671)
Q Consensus       142 ~~~~~--~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V  218 (671)
                      ..|..  .++++.+.....  +    .+...   +..++. .+.++.+...++   +         ..+|+.+|++|++|
T Consensus       168 ~~~~~~~~~~~~l~~~~~~--~----~~~~~---~~~~~~~~~~~v~~~~~~~---~---------~~~v~~~~~~Gl~v  226 (265)
T cd08564         168 LRPNKLNVPIALLFNEVKS--P----SPLDF---LEQAKYYNATWVNFSYDFW---T---------EEFVKKAHENGLKV  226 (265)
T ss_pred             hCcCCCCceEEEEecCCCC--c----ccccH---HHHHHhcCCceeeechhhh---h---------HHHHHHHHHcCCEE
Confidence            55521  677765432210  0    01111   122221 255565544433   2         48999999999999


Q ss_pred             EEee----ecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894          219 YASG----FANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA  266 (671)
Q Consensus       219 ~~wt----v~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~  266 (671)
                      ++||    +|++            .++.++++.|   ||||+||+|..+..+
T Consensus       227 ~~wT~~~~~n~~------------~~~~~l~~~G---vdgiiTD~p~~~~~~  263 (265)
T cd08564         227 MTYFDEPVNDNE------------EDYKVYLELG---VDCICPNDPVLLVNF  263 (265)
T ss_pred             EEecCCCCCCCH------------HHHHHHHHcC---CCEEEcCCHHHHHHh
Confidence            9999    3333            4588999999   999999999877653

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins

Probab=99.93  E-value=6.8e-26  Score=238.10  Aligned_cols=220  Identities=16%  Similarity=0.162  Sum_probs=147.4

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccC-C
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYT-R   81 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~-r   81 (671)
                      .+...+..+||||||+||||++||+||.+|+|+||+.+.++...      |  ..|+ |.|+|++||+++++++ |+. .
T Consensus        30 ~A~~~Gad~vE~DV~lTkDG~lVv~HD~~l~r~~~~~~~~~~~~------g--~~~~-v~~lT~~eL~~l~~~~-~~~~~   99 (293)
T cd08572          30 AAAKHGADMVEFDVQLTKDGVPVIYHDFTISVSEKSKTGSDEGE------L--IEVP-IHDLTLEQLKELGLQH-ISALK   99 (293)
T ss_pred             HHHHcCCCEEEEEEEEccCCeEEEEcCCcceeecccccccccCc------c--eeee-hhhCcHHHHHhccccc-ccccc
Confidence            34567889999999999999999999999999999844322110      0  1344 9999999999999984 421 1


Q ss_pred             Ccc--------------CCCCCCCCChhhhhHHHHH------hcCc------------------cHHHHHHHHHHHcC-C
Q 005894           82 SEA--------------FDNTQPIPTPDTIYDLFYS------QHNI------------------SAAKYITEYLQKLI-S  122 (671)
Q Consensus        82 ~~~--------------f~~~~~IptL~ev~~~~~~------~~~~------------------~~~~~v~~~l~~~~-~  122 (671)
                      .+.              +..+++||||+||++.+..      |.+.                  .+++.+++++++++ .
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~iptL~evL~~~~~~~~l~IEiK~~~~~~~~~~~~~~~~~~~~~~~~vl~~i~~~~~~  179 (293)
T cd08572         100 RKALTRKAKGPKPNPWGMDEHDPFPTLQEVLEQVPKDLGFNIEIKYPQLLEDGEGELTPYFERNAFVDTILAVVFEHAGG  179 (293)
T ss_pred             ccccccccccCCccccchhhccCCCCHHHHHHhCCCccceEEEEecCCccccccccccchHHHHHHHHHHHHHHHHhCCC
Confidence            110              1136899999999654422      1111                  25678899999988 6


Q ss_pred             ceEEEeCCChHHHHHhhhhcCCCCcceEEEecCCCCc-CCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCC
Q 005894          123 NVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAV-EPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRY  200 (671)
Q Consensus       123 ~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~~~-~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y  200 (671)
                      ++++++||++..|+.+++ ..| ..+++|.+...... ..... ....+-..+.+.+.. +.++.+...++         
T Consensus       180 ~~vv~~SF~~~~l~~l~~-~~p-~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  247 (293)
T cd08572         180 RRIIFSSFDPDICIMLRL-KQN-KYPVLFLTNGGTNEVEHMDP-RRRSLQAAVNFALAEGLLGVVLHAEDL---------  247 (293)
T ss_pred             CcEEEECCCHHHHHHHHh-hCc-cCCEEEEecCCCCcccccch-hhhhHHHHHHHHHHCCCeEEEechHHh---------
Confidence            789999999999999995 566 48888754321100 00000 000010112222221 34444433322         


Q ss_pred             cCCCcHHHHHHHHcCCeEEEeee--cCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          201 LEPATTLVTDAHNAGLQVYASGF--ANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       201 ~~~~~~~V~~ah~~Gl~V~~wtv--~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                       ....++|++||++|++|++|||  |++            .++..+++.|   ||||+||+|
T Consensus       248 -~~~~~~v~~~~~~Gl~v~~wTv~~n~~------------~~~~~l~~~G---VdgIiTD~~  293 (293)
T cd08572         248 -LKNPSLISLVKALGLVLFTYGDDNNDP------------ENVKKQKELG---VDGVIYDRV  293 (293)
T ss_pred             -hcCcHHHHHHHHcCcEEEEECCCCCCH------------HHHHHHHHcC---CCEEEecCC
Confidence             2235899999999999999999  444            4588999999   999999986

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins

Probab=99.93  E-value=7.3e-26  Score=230.88  Aligned_cols=192  Identities=18%  Similarity=0.155  Sum_probs=139.2

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccc-cccccccCHHHHccccccccccCCC
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVR-GWFSVDYTLEQLGQLYLVQNVYTRS   82 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~-G~~v~d~T~~EL~~l~~~~~~~~r~   82 (671)
                      +...+..+||||||+||||++||+||.+|+|+||+                  + |. +.++|++||+++++++      
T Consensus        22 a~~~g~d~vE~Dv~lTkDg~~vv~HD~~l~R~t~~------------------~~~~-v~~~t~~eL~~l~~~~------   76 (234)
T cd08570          22 AVEAGADAIETDVHLTKDGVVVISHDPNLKRCFGK------------------DGLI-IDDSTWDELSHLRTIE------   76 (234)
T ss_pred             HHHhCCCEEEEEeeEccCCcEEEeCCCccceeeCC------------------CCCE-eccCCHHHHhhccccc------
Confidence            34457789999999999999999999999999999                  7 55 9999999999999872      


Q ss_pred             ccCCCCCCCCChhhhhHHHHHh----------cC-----ccHHHHHHHHHHHcC-----CceEEEeCCChHHHHHhhhhc
Q 005894           83 EAFDNTQPIPTPDTIYDLFYSQ----------HN-----ISAAKYITEYLQKLI-----SNVYYISSPEIGFLKTMDRKV  142 (671)
Q Consensus        83 ~~f~~~~~IptL~ev~~~~~~~----------~~-----~~~~~~v~~~l~~~~-----~~~~~isSf~~~~L~~i~~~~  142 (671)
                         .++++||||+|+++.+...          .+     ..+++.+.+++++++     .++++|+||++..|+.+++ .
T Consensus        77 ---~~~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~~~~~~~~v~~~i~~~~~~~~~~~~v~i~Sf~~~~l~~l~~-~  152 (234)
T cd08570          77 ---EPHQPMPTLKDVLEWLVEHELPDVKLMLDIKRDNDPEILFKLIAEMLAVKPDLDFWRERIILGLWHLDFLKYGKE-V  152 (234)
T ss_pred             ---CCCccCCcHHHHHHHHHhcCCCCeEEEEEECCCCCHHHHHHHHHHHHHhcCCcccccCCEEEEeCCHHHHHHHHH-h
Confidence               1257899999998765321          12     135567778888875     2689999999999999995 5


Q ss_pred             CCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEee
Q 005894          143 DHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASG  222 (671)
Q Consensus       143 ~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wt  222 (671)
                      .| +.++++......     .   ...+   +.... -+.++.+....++-     .   ...++|+.||++|++|++||
T Consensus       153 ~p-~~~~~~l~~~~~-----~---~~~~---~~~~~-~~~~~~~~~~~~~~-----~---~~~~~v~~~~~~gl~v~~wT  211 (234)
T cd08570         153 LP-GFPVFHIGFSLD-----Y---ARHF---LNYSE-KLVGISMHFVSLWG-----P---FGQAFLPELKKNGKKVFVWT  211 (234)
T ss_pred             CC-CCCeEEEEcCHH-----H---HHHH---hcccc-ccceEEeeeehhhc-----c---cCHHHHHHHHHCCCEEEEEe
Confidence            56 477765422110     0   0000   00000 02333332221110     0   13589999999999999999


Q ss_pred             ecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          223 FANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       223 v~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                      ||++..            ++++++.|   ||||+||+|
T Consensus       212 vn~~~~------------~~~l~~~g---vdgiiTD~P  234 (234)
T cd08570         212 VNTEED------------MRYAIRLG---VDGVITDDP  234 (234)
T ss_pred             cCCHHH------------HHHHHHCC---CCEEEeCCC
Confidence            998854            88999999   999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip

>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins

Probab=99.93  E-value=8.8e-26  Score=230.96  Aligned_cols=206  Identities=17%  Similarity=0.171  Sum_probs=144.8

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+|+||+                  +|. +.++|++||++++++ .|+   .
T Consensus        24 A~~~g~d~iE~DV~~T~Dg~~vv~HD~~l~r~t~~------------------~~~-v~~~t~~el~~l~~~-~~~---~   80 (240)
T cd08566          24 AIDLGADIVEIDVRRTKDGVLVLMHDDTLDRTTNG------------------KGK-VSDLTLAEIRKLRLK-DGD---G   80 (240)
T ss_pred             HHHcCCCEEEEEeeEcCCCCEEEECCCCCccccCC------------------CCc-hhhCcHHHHHhCCcC-CCc---C
Confidence            34567789999999999999999999999999999                  888 999999999999998 444   3


Q ss_pred             cCCCCCCCCChhhhhHHHHHh------cCccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceEEEecCC
Q 005894           84 AFDNTQPIPTPDTIYDLFYSQ------HNISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEP  156 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~~------~~~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~  156 (671)
                      .|. +++||||+|+++.+...      .+....+.+++++++++ .++++++||+...|+.+++ ..| ..++.+.+...
T Consensus        81 ~~~-~~~iptL~evl~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~v~~~sf~~~~l~~~~~-~~p-~~~~~~l~~~~  157 (240)
T cd08566          81 EVT-DEKVPTLEEALAWAKGKILLNLDLKDADLDEVIALVKKHGALDQVIFKSYSEEQAKELRA-LAP-EVMLMPIVRDA  157 (240)
T ss_pred             CCC-CCCCCCHHHHHHhhhcCcEEEEEECchHHHHHHHHHHHcCCcccEEEEECCHHHHHHHHH-hCC-CCEEEEEEccC
Confidence            444 89999999997765332      23235678999999998 5789999999999999995 556 47777643211


Q ss_pred             CCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHc-CCeEEEeeecCCcccC--CC
Q 005894          157 NAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNA-GLQVYASGFANDIYSS--YS  232 (671)
Q Consensus       157 ~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~-Gl~V~~wtv~~~~~~~--~~  232 (671)
                      ..     .  ....   ...+.. .+.++.+.....           .....+..+|++ |++|++||||++....  ..
T Consensus       158 ~~-----~--~~~~---~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~Gl~v~~wTvn~~~~~~~~~~  216 (240)
T cd08566         158 ED-----L--DEEE---ARAIDALNLLAFEITFDDL-----------DLPPLFDELLRALGIRVWVNTLGDDDTAGLDRA  216 (240)
T ss_pred             cc-----h--hHHH---HhcccccceEEEEEecccc-----------ccHHHHHHHHHhCCCEEEEECCCcccccchhhh
Confidence            10     0  0000   000000 012222221110           124788889998 9999999999642100  00


Q ss_pred             CCCChHHHHHHHhhcCceeeeeEeecCC
Q 005894          233 YNFEPEAEYLTFIDNSQFAVDGFITDFP  260 (671)
Q Consensus       233 ~~~d~~~e~~~~i~~g~~~Vdgv~td~p  260 (671)
                      + .+...++.++++.|   ||||+||+|
T Consensus       217 ~-~~~~~~~~~l~~~G---vd~I~TD~P  240 (240)
T cd08566         217 L-SDPREVWGELVDAG---VDVIQTDRP  240 (240)
T ss_pred             h-hCchhHHHHHHHcC---CCEEecCCC
Confidence            1 12236688999999   999999998

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.

>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins

Probab=99.93  E-value=1e-25  Score=231.92  Aligned_cols=212  Identities=22%  Similarity=0.212  Sum_probs=147.2

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC-C
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR-S   82 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r-~   82 (671)
                      +...+.-+||||||+||||++||+||.+|+|+||+                  +|. +.++|++||++++++. +++. .
T Consensus        22 A~~~g~d~vE~Dv~~TkDg~~Vv~HD~~l~r~t~~------------------~~~-i~~~t~~el~~l~~~~-~~~~~~   81 (249)
T cd08561          22 AVELGADVLETDVHATKDGVLVVIHDETLDRTTDG------------------TGP-VADLTLAELRRLDAGY-HFTDDG   81 (249)
T ss_pred             HHHhCCCEEEEEeeECCCCCEEEECCCccccccCC------------------CCc-hhhCCHHHHhhcCcCc-cccCcc
Confidence            34567789999999999999999999999999999                  888 9999999999999884 4321 1


Q ss_pred             c-c--CC-CCCCCCChhhhhHHHHH-----hcCc---cHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894           83 E-A--FD-NTQPIPTPDTIYDLFYS-----QHNI---SAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKL  149 (671)
Q Consensus        83 ~-~--f~-~~~~IptL~ev~~~~~~-----~~~~---~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~  149 (671)
                      . .  +. .+++||||+|+++.+..     +.+.   .+++.+++++++++ .++++++||+...|+.+++ ..| +.++
T Consensus        82 ~~~~~~~~~~~~iptL~evl~~~~~~~~~ieiK~~~~~~~~~~~~~l~~~~~~~~~~~~Sf~~~~l~~~~~-~~p-~~~~  159 (249)
T cd08561          82 GRTYPYRGQGIRIPTLEELFEAFPDVRLNIEIKDDGPAAAAALADLIERYGAQDRVLVASFSDRVLRRFRR-LCP-RVAT  159 (249)
T ss_pred             ccccccCCCCccCCCHHHHHHhCcCCcEEEEECCCchhHHHHHHHHHHHcCCCCcEEEEECCHHHHHHHHH-HCC-Ccce
Confidence            1 1  11 26899999999765532     1222   57888999999998 6789999999999999995 656 3666


Q ss_pred             EEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCccc
Q 005894          150 VFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYS  229 (671)
Q Consensus       150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~  229 (671)
                      .+.......+..      ..........+....++.++..+.       +|......+|+.+|++|++|++||||++.. 
T Consensus       160 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~G~~v~vWTVN~~~~-  225 (249)
T cd08561         160 SAGEGEVAAFVL------ASRLGLGSLYSPPYDALQIPVRYG-------GVPLVTPRFVRAAHAAGLEVHVWTVNDPAE-  225 (249)
T ss_pred             eccHHHHHHHHH------HhhcccccccCCCCcEEEcCcccC-------CeecCCHHHHHHHHHCCCEEEEEecCCHHH-
Confidence            542100000000      000000000001123333332211       122234699999999999999999998744 


Q ss_pred             CCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          230 SYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       230 ~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                                 +..+++.|   ||||+||+|.....
T Consensus       226 -----------~~~l~~~g---VdgIiTD~p~~~~~  247 (249)
T cd08561         226 -----------MRRLLDLG---VDGIITDRPDLLLE  247 (249)
T ss_pred             -----------HHHHHhcC---CCEEEcCCHHHHHh
Confidence                       88999999   99999999987653

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins

Probab=99.93  E-value=1.6e-25  Score=235.12  Aligned_cols=215  Identities=15%  Similarity=0.145  Sum_probs=145.1

Q ss_pred             cccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHcccccc---ccc
Q 005894            2 AKSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLV---QNV   78 (671)
Q Consensus         2 ~~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~---~~~   78 (671)
                      ..+...+..+||+|||+||||++||+||.+|+|| |+                  +|. |.|+|++||++++..   ..|
T Consensus        31 ~~A~~~g~d~vE~DV~lTkDg~~VV~HD~~l~rt-~~------------------~~~-v~~lt~~eL~~ld~~~~~~~~   90 (286)
T cd08606          31 ILAASLGASYVEVDVQLTKDLVPVIYHDFLVSET-GT------------------DVP-IHDLTLEQFLHLSRMKYTVDF   90 (286)
T ss_pred             HHHHHcCCCEEEEEEEEccCCEEEEeCCCeeccC-CC------------------CCc-cccCCHHHHHhhhcccccccc
Confidence            3455678899999999999999999999999994 77                  777 999999999999843   223


Q ss_pred             cCCCccCCC---C----CCCCChhhhhHHHHH------hcCc-------------------cHHHHHHHHHHHcC-CceE
Q 005894           79 YTRSEAFDN---T----QPIPTPDTIYDLFYS------QHNI-------------------SAAKYITEYLQKLI-SNVY  125 (671)
Q Consensus        79 ~~r~~~f~~---~----~~IptL~ev~~~~~~------~~~~-------------------~~~~~v~~~l~~~~-~~~~  125 (671)
                      ++  ..|..   +    ++||||+||++.+..      |.+.                   .+++.+++++++++ .+++
T Consensus        91 ~~--~~~~~~~~g~~~~~~iptL~evl~~~~~~~~l~IEiK~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~v  168 (286)
T cd08606          91 KK--KGFKGNSRGHSIQAPFTTLEELLKKLPKSVGFNIELKYPMLHEAEEEEVAPVAIELNAFVDTVLEKVFDYGAGRNI  168 (286)
T ss_pred             cc--cCCCCcccccccccCCCcHHHHHHhCCCccceEEEEecCCcchhhhcccccchhHHHHHHHHHHHHHHhcCCCCce
Confidence            22  33431   2    469999999654422      1121                   23457889999988 5789


Q ss_pred             EEeCCChHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCC
Q 005894          126 YISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPA  204 (671)
Q Consensus       126 ~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~  204 (671)
                      +++||++..++.++. ..| ..++.+.+... . .+........+.....+.+.. +.|+.++..+.          ...
T Consensus       169 i~sSF~~~~l~~~~~-~~p-~~~~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~  234 (286)
T cd08606         169 IFSSFTPDICILLSL-KQP-GYPVLFLTEAG-K-APDMDVRAASLQEAIRFAKQWNLLGLVSAAEPL----------VMC  234 (286)
T ss_pred             EEEcCCHHHHHHHHh-hCc-CCCEEEEeCCC-C-CccCCchhhcHHHHHHHHHHCCCeEEEechHHh----------hhC
Confidence            999999999999995 556 47877643211 1 110000000010011111111 23333222221          123


Q ss_pred             cHHHHHHHHcCCeEEEeee--cCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          205 TTLVTDAHNAGLQVYASGF--ANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       205 ~~~V~~ah~~Gl~V~~wtv--~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      ..+|+.+|++|++|++|||  |++.            +++++++.|   ||||+||+|......+
T Consensus       235 ~~~v~~~~~~Gl~v~~WTv~~n~~~------------~~~~l~~~G---VdgIiTD~p~~~~~~~  284 (286)
T cd08606         235 PRLIQVVKRSGLVCVSYGVLNNDPE------------NAKTQVKAG---VDAVIVDSVLAIRRGL  284 (286)
T ss_pred             hHHHHHHHHCCcEEEEECCccCCHH------------HHHHHHHcC---CCEEEECCHHHHHHHh
Confidence            5899999999999999999  5554            488999999   9999999999876543

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp

>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins

Probab=99.92  E-value=3.9e-25  Score=229.39  Aligned_cols=205  Identities=22%  Similarity=0.190  Sum_probs=143.5

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccc----cccccccccccccccCCcccccccccccCHHHHccccccccc
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNIT----TINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNV   78 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT----~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~   78 (671)
                      .+...+..+||||||+||||++||+||.+|+|+|    ++  .|+.+          ..|. |.|+|++||++++++...
T Consensus        23 ~A~~~Gad~vE~DV~~TkDg~~Vv~HD~~l~r~~~r~~~~--~~~~~----------~~~~-v~~~t~~el~~l~~~~~~   89 (263)
T cd08567          23 KALDLGVDTLELDLVLTKDGVIVVSHDPKLNPDITRDPDG--AWLPY----------EGPA-LYELTLAEIKQLDVGEKR   89 (263)
T ss_pred             HHHHcCCCEEEEEEEEcCCCCEEEeCCCccCcceeecCCC--Ccccc----------cCcc-hhcCCHHHHHhcCCCccc
Confidence            3445677899999999999999999999999754    43  11111          1366 999999999999998432


Q ss_pred             cCC--CccCC-----CCCCCCChhhhhHHHHHh----c------C------------ccHHHHHHHHHHHcC-CceEEEe
Q 005894           79 YTR--SEAFD-----NTQPIPTPDTIYDLFYSQ----H------N------------ISAAKYITEYLQKLI-SNVYYIS  128 (671)
Q Consensus        79 ~~r--~~~f~-----~~~~IptL~ev~~~~~~~----~------~------------~~~~~~v~~~l~~~~-~~~~~is  128 (671)
                      +.+  ...|.     .+++||||+|+++.+...    .      +            ..+++.+++++++++ .++++|+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~~~  169 (263)
T cd08567          90 PGSDYAKLFPEQIPVPGTRIPTLEEVFALVEKYGNQKVRFNIETKSDPDRDILHPPPEEFVDAVLAVIRKAGLEDRVVLQ  169 (263)
T ss_pred             cCcCcccCCCccccCccccCCCHHHHHHHHHHhccCCceEEEEEcCCCCccccCccHHHHHHHHHHHHHHcCCCCceEEE
Confidence            111  23332     158999999997765431    1      1            125678899999988 5789999


Q ss_pred             CCChHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHH
Q 005894          129 SPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTL  207 (671)
Q Consensus       129 Sf~~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~  207 (671)
                      ||++..|+.+++ ..| ..++++.+.....      ..+.      ..++. -+..+.+....            ...++
T Consensus       170 Sf~~~~l~~~~~-~~p-~~~~~~l~~~~~~------~~~~------~~~~~~~~~~~~~~~~~------------~~~~~  223 (263)
T cd08567         170 SFDWRTLQEVRR-LAP-DIPTVALTEETTL------GNLP------RAAKKLGADIWSPYFTL------------VTKEL  223 (263)
T ss_pred             eCCHHHHHHHHH-HCC-CccEEEEecCCcc------cCHH------HHHHHhCCcEEecchhh------------cCHHH
Confidence            999999999995 556 4777765432210      0111      11111 12333332221            23589


Q ss_pred             HHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCC
Q 005894          208 VTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPT  261 (671)
Q Consensus       208 V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~  261 (671)
                      ++.+|++|++|++||||++.            ++.++++.|   ||||+||+|.
T Consensus       224 i~~~~~~G~~v~vwtvn~~~------------~~~~~~~~G---vdgi~TD~P~  262 (263)
T cd08567         224 VDEAHALGLKVVPWTVNDPE------------DMARLIDLG---VDGIITDYPD  262 (263)
T ss_pred             HHHHHHCCCEEEEecCCCHH------------HHHHHHHcC---CCEEEcCCCC
Confidence            99999999999999998764            388999999   9999999996

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases

Probab=99.92  E-value=6.7e-25  Score=223.78  Aligned_cols=188  Identities=16%  Similarity=0.140  Sum_probs=133.8

Q ss_pred             CCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCccCC
Q 005894            7 LSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFD   86 (671)
Q Consensus         7 ~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~f~   86 (671)
                      .+. .||+|||+||||++||+||.+|+|+||+                  +|. |.++|++||++++++.          
T Consensus        33 ~G~-~iE~DV~lT~Dg~lVv~HD~~l~r~t~~------------------~~~-v~~~t~~eL~~l~~~~----------   82 (237)
T cd08585          33 AGY-GIELDVQLTADGEVVVFHDDNLKRLTGV------------------EGR-VEELTAAELRALRLLG----------   82 (237)
T ss_pred             cCC-cEEEEeeECCCCCEEEeccchHhhhcCC------------------CCc-cccCCHHHHhcCCCCC----------
Confidence            344 7999999999999999999999999999                  888 9999999999999872          


Q ss_pred             CCCCCCChhhhhHHHHHh------cC------ccHHHHHHHHHHHcCCceEEEeCCChHHHHHhhhhcCCCCcceEEEec
Q 005894           87 NTQPIPTPDTIYDLFYSQ------HN------ISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVL  154 (671)
Q Consensus        87 ~~~~IptL~ev~~~~~~~------~~------~~~~~~v~~~l~~~~~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~  154 (671)
                      .+++||||+||++.+...      .+      ..+++.+++++++++ .+++|+||++..|+.+++ ..| +.++.+.+.
T Consensus        83 ~~~~iPtL~evl~~~~~~~~l~iEiK~~~~~~~~l~~~v~~~l~~~~-~~v~i~SF~~~~l~~l~~-~~p-~~~~~~l~~  159 (237)
T cd08585          83 TDEHIPTLDEVLELVAGRVPLLIELKSCGGGDGGLERRVLAALKDYK-GPAAIMSFDPRVVRWFRK-LAP-GIPRGQLSE  159 (237)
T ss_pred             CCCCCCCHHHHHHHhccCceEEEEEccCCccchHHHHHHHHHHHhcC-CCEEEEECCHHHHHHHHH-HCC-CCCEEEEec
Confidence            278999999997654322      12      246778888888875 478899999999999995 667 488876542


Q ss_pred             CCCCcCCCCCCCHH-HHhhcHHH-HHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHc-CCeEEEeeecCCcccCC
Q 005894          155 EPNAVEPTTNQTYG-SILKNLTA-IKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNA-GLQVYASGFANDIYSSY  231 (671)
Q Consensus       155 ~~~~~~~~~~~~y~-~~~~~l~~-i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~-Gl~V~~wtv~~~~~~~~  231 (671)
                      .... .. ....+. .+.+.+.. ....++.+.+....+            ..++|+.||++ |++|++||||++..   
T Consensus       160 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~G~~v~vWTVnd~~~---  222 (237)
T cd08585         160 GSND-EA-DPAFWNEALLSALFSNLLTRPDFIAYHLDDL------------PNPFVTLARALLGMPVIVWTVRTEED---  222 (237)
T ss_pred             CCcc-cc-cccchhHHHHHhhhhhhccCCCEEEeChhhC------------cCHHHHHHHHhcCCcEEEEeCCCHHH---
Confidence            1110 00 000000 01111100 001123333322221            25899999999 99999999999854   


Q ss_pred             CCCCChHHHHHHHhhcCceeeeeEe
Q 005894          232 SYNFEPEAEYLTFIDNSQFAVDGFI  256 (671)
Q Consensus       232 ~~~~d~~~e~~~~i~~g~~~Vdgv~  256 (671)
                               ++++++.|   +++|+
T Consensus       223 ---------~~~l~~~G---~~~i~  235 (237)
T cd08585         223 ---------IARLKQYA---DNIIF  235 (237)
T ss_pred             ---------HHHHHHhC---CeeEe
Confidence                     88999999   99887

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.

>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases

Probab=99.90  E-value=1.9e-23  Score=213.49  Aligned_cols=193  Identities=12%  Similarity=0.119  Sum_probs=135.4

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCccccc-ccccccccccccccccCCcccccccccccCHHHHccccccccccCCC
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNI-TTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRS   82 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~Ldrt-T~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~   82 (671)
                      +...+..+||||||+||||++||+||.+++|+ +.+               ...++. +.++|++||++++..       
T Consensus        24 A~~~G~d~iE~DV~lTkDg~lVv~HD~~~~r~~~~g---------------~~~~~~-i~~~t~~el~~~~~~-------   80 (237)
T cd08583          24 NYKKGYRVFEVDLSLTSDGVLVARHSWDESLLKQLG---------------LPTSKN-TKPLSYEEFKSKKIY-------   80 (237)
T ss_pred             HHHhCCCEEEEEeeEccCCCEEEEECCcCchhhhcC---------------Cccccc-ccCCCHHHHhhcccc-------
Confidence            44568889999999999999999999999885 222               011445 899999999987653       


Q ss_pred             ccCCCCCCCCChhhhhHHHHH--h------cCc-------cHHHHHHHHHHHc--C-CceEEEeCCChHHHHHhhhhcCC
Q 005894           83 EAFDNTQPIPTPDTIYDLFYS--Q------HNI-------SAAKYITEYLQKL--I-SNVYYISSPEIGFLKTMDRKVDH  144 (671)
Q Consensus        83 ~~f~~~~~IptL~ev~~~~~~--~------~~~-------~~~~~v~~~l~~~--~-~~~~~isSf~~~~L~~i~~~~~~  144 (671)
                          ++++||||+||.+.+..  .      .+.       .+...+++.++++  + .++++++||++..|+.+++ ..|
T Consensus        81 ----~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~SF~~~~L~~~~~-~~p  155 (237)
T cd08583          81 ----GKYTPMDFKDVIDLLKKYPDVYIVTDTKQDDDNDIKKLYEYIVKEAKEVDPDLLDRVIPQIYNEEMYEAIMS-IYP  155 (237)
T ss_pred             ----CCCCCCCHHHHHHHHHhCCCeEEEEEecCCCcccHHHHHHHHHHHHHhhcccccceeEEEecCHHHHHHHHH-hCC
Confidence                26899999999776542  1      121       1344678888875  2 4689999999999999995 656


Q ss_pred             CCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeee
Q 005894          145 NTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGF  223 (671)
Q Consensus       145 ~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv  223 (671)
                      . ....+.......      ......   +..++.. +.++.+++..+            ...+|+.+|++|++|++|||
T Consensus       156 ~-~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~Gl~v~vwTV  213 (237)
T cd08583         156 F-KSVIYTLYRQDS------IRLDEI---IAFCYENGIKAVTISKNYV------------NDKLIEKLNKAGIYVYVYTI  213 (237)
T ss_pred             C-cceeeEeccccc------cchHHH---HHHHHHcCCcEEEechhhc------------CHHHHHHHHHCCCEEEEEeC
Confidence            2 344443221110      000001   1122222 44555544333            25899999999999999999


Q ss_pred             cCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCC
Q 005894          224 ANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPT  261 (671)
Q Consensus       224 ~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~  261 (671)
                      |++..            ++++++.|   ||||+||++.
T Consensus       214 n~~~~------------~~~l~~~G---VdgiiTD~~~  236 (237)
T cd08583         214 NDLKD------------AQEYKKLG---VYGIYTDFLT  236 (237)
T ss_pred             CCHHH------------HHHHHHcC---CCEEEeCCCC
Confidence            99854            88999999   9999999985

This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.

>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme

Probab=99.90  E-value=3.3e-24  Score=219.81  Aligned_cols=209  Identities=25%  Similarity=0.310  Sum_probs=127.3

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHcccc-cc--ccccC
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLY-LV--QNVYT   80 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~-~~--~~~~~   80 (671)
                      +...+..+||||||+||||++||+||.+|+|+|++                  .|. +.|+|++||++++ ++  .....
T Consensus        19 A~~~G~~~iE~Dv~lTkDg~~Vv~HD~~l~r~~~~------------------~~~-i~~~t~~el~~l~~~~~~~~~~~   79 (256)
T PF03009_consen   19 AIELGADGIELDVQLTKDGVPVVFHDDTLDRTTGG------------------DGP-ISDLTYAELKKLRTLGSKNSPPF   79 (256)
T ss_dssp             HHHTTSSEEEEEEEE-TTS-EEE-SSSBSTTTSST------------------ESB-GGGS-HHHHTTSBESSTTTTCGG
T ss_pred             HHHhCCCeEcccccccCCceeEeccCCeeeeecCC------------------Cce-eccCCHHHHhhCcccccCCcccc
Confidence            44667899999999999999999999999999999                  777 9999999999999 43  11223


Q ss_pred             CCccCCCCCCCCChhhhhHHHHHh-c------C----c------cHHHHHHHHHHHcC-------CceEEEeCCChHHHH
Q 005894           81 RSEAFDNTQPIPTPDTIYDLFYSQ-H------N----I------SAAKYITEYLQKLI-------SNVYYISSPEIGFLK  136 (671)
Q Consensus        81 r~~~f~~~~~IptL~ev~~~~~~~-~------~----~------~~~~~v~~~l~~~~-------~~~~~isSf~~~~L~  136 (671)
                      +...++..++||||+|+.+..... .      +    .      .+...++..+....       ..+++++||+...++
T Consensus        80 ~~~~~~~~~~i~tl~e~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sf~~~~l~  159 (256)
T PF03009_consen   80 RGQRIPGKQKIPTLEEVLELCAKVKLNLEIKIKSKDEIKDPEFLKIVKDIVESVSDILKNSKQALSRRIIISSFDPEALK  159 (256)
T ss_dssp             TTTTSCTCB--EBHHHHHHHHHTTTSEEEEEEEECTTSHHHHHHHHHHHHHHHHHHCHHHHHHHHCTSEEEEESCHHHHH
T ss_pred             cccceecccccCcHHHHHHhhhhccceeEEEEeecccccchhhccccccccccccccccccccccccccccccCcHHHHH
Confidence            334444457899999997652221 1      0    0      11222233332221       358999999999999


Q ss_pred             HhhhhcCCCCcceEEEecCCCCcCCCCCCCHHH--HhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHc
Q 005894          137 TMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGS--ILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNA  214 (671)
Q Consensus       137 ~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~--~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~  214 (671)
                      .+++.. | +.++++.+......       +..  ....+..++  ..++......+   ..    ....+++|+.||++
T Consensus       160 ~l~~~~-~-~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~~~~---~~----~~~~~~~v~~~~~~  221 (256)
T PF03009_consen  160 QLKQRA-P-RYPVGFLFEQDDEA-------PADISLFELYKFVK--CPGFLASVWNY---AD----RLGNPRLVQEAHKA  221 (256)
T ss_dssp             HHHHHC-T-TSEEEEEESSCHHH-------HHH-CCHHHHHHHT--TTEEEEEHGGG---GH----HCEBHHHHHHHHHT
T ss_pred             HHHhcC-C-CceEEEEeccCccc-------cccchhhHHHHhhc--ccccccccccc---cc----ccccHHHHHHHHHC
Confidence            999644 4 47777654322110       000  000111111  22222111111   10    00125799999999


Q ss_pred             CCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCc
Q 005894          215 GLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTT  262 (671)
Q Consensus       215 Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~  262 (671)
                      |++|++||||++.          ..++.++++.|   ||||+||+|.+
T Consensus       222 g~~v~~wtvn~~~----------~~~~~~l~~~g---vdgIiTD~P~~  256 (256)
T PF03009_consen  222 GLKVYVWTVNDPD----------VEDMKRLLDLG---VDGIITDFPDT  256 (256)
T ss_dssp             T-EEEEBSB-SHS----------HHHHHHHHHHT----SEEEES-HHH
T ss_pred             CCEEEEEecCCcH----------HHHHHHHHhCC---CCEEEEcCCCC
Confidence            9999999999982          13488999999   99999999964

; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....

>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4

Probab=99.89  E-value=2.3e-23  Score=216.36  Aligned_cols=207  Identities=16%  Similarity=0.157  Sum_probs=141.4

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC--C
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR--S   82 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r--~   82 (671)
                      ...+..+||||||+||||++||+||.+|+|+||+                  +|. |.|+|++||++++++ .|+..  .
T Consensus        70 ~~~Gad~IE~DV~lTkDg~lVV~HD~tL~R~T~g------------------~g~-V~dlTlaEL~~Ld~g-~~~~~~~g  129 (309)
T cd08613          70 FDAGADVVELDVHPTKDGEFAVFHDWTLDCRTDG------------------SGV-TRDHTMAELKTLDIG-YGYTADGG  129 (309)
T ss_pred             HHcCCCEEEEEEEEccCCeEEEEecCccccccCC------------------CCc-hhhCCHHHHhhCCcC-cccccccc
Confidence            4567889999999999999999999999999999                  888 999999999999998 45532  1


Q ss_pred             ccCC----CCCCCCChhhhhHHHHH-----hcC---ccHHHHHHHHHHHcCCceEEEeCCC--hHHHHHhhhhcCCCCcc
Q 005894           83 EAFD----NTQPIPTPDTIYDLFYS-----QHN---ISAAKYITEYLQKLISNVYYISSPE--IGFLKTMDRKVDHNTTK  148 (671)
Q Consensus        83 ~~f~----~~~~IptL~ev~~~~~~-----~~~---~~~~~~v~~~l~~~~~~~~~isSf~--~~~L~~i~~~~~~~~~~  148 (671)
                      ..|+    +..+||||+|+++.+..     +.|   ....+.+.+++++++..++.+.||+  ...|+++++ ..|. .+
T Consensus       130 ~~~p~~~~~~~~IPTL~EvL~~~~~~~l~IEiK~~~~~~~~~v~~~i~~~~~~r~~v~sf~s~~~~l~~~r~-l~P~-~~  207 (309)
T cd08613         130 KTFPFRGKGVGMMPTLDEVFAAFPDRRFLINFKSDDAAEGELLAEKLATLPRKRLQVLTVYGGDKPIAALRE-LTPD-LR  207 (309)
T ss_pred             cccccccCCCCCCcCHHHHHHhcCCCcEEEEeCCCCccHHHHHHHHHHhcCccceEEEEEECCHHHHHHHHH-HCCC-Cc
Confidence            2232    12579999999776533     222   2345889999999885566666676  777999995 5452 44


Q ss_pred             eEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCC----cceeecCCCCCCcCC-CcHHHHHHHHcCCeEEEe--
Q 005894          149 LVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPK----SYIIPVNNKTRYLEP-ATTLVTDAHNAGLQVYAS--  221 (671)
Q Consensus       149 ~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~----~~i~p~~~~~~y~~~-~~~~V~~ah~~Gl~V~~w--  221 (671)
                      +.-    ...        -..-  .+.++....+|..+..    ...+|.+- ..++-. +..+++.+|++|.+|++|  
T Consensus       208 ~~s----~~~--------~~~~--~~~~~~~~~~g~~p~~~~~~~~~vP~~~-~~~~~~w~~~f~~~~~~~g~~V~~~~~  272 (309)
T cd08613         208 TLS----KAS--------MKDC--LIEYLALGWTGYVPDSCRNTTLLIPLNY-APWLWGWPNRFLARMEAAGTRVILVGP  272 (309)
T ss_pred             eec----ccc--------hHHH--HHHHHhhcccccCCccccCCeEecCccc-cceEEeCCHHHHHHHHHcCCeEEEEec
Confidence            331    100        0000  0111111012222111    12233322 233334 579999999999999999  


Q ss_pred             --------eecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcc
Q 005894          222 --------GFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTA  263 (671)
Q Consensus       222 --------tv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~  263 (671)
                              ||+++..            |+++.+.|   +|||+||.++..
T Consensus       273 ~~~~~~~~~~d~~~~------------~~~l~~~~---~~gi~T~r~~~l  307 (309)
T cd08613         273 YTGGEFSEGFDTPED------------LKRLPEGF---TGYIWTNKIEAL  307 (309)
T ss_pred             ccCCcccCCCCCHHH------------HHHHHhhC---CCeEEeCCHhhc
Confidence                    7877744            99999999   999999988753

This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.

>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]

Probab=99.87  E-value=9.8e-22  Score=203.32  Aligned_cols=206  Identities=23%  Similarity=0.273  Sum_probs=153.2

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA   84 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~   84 (671)
                      .-.+..+||||||+||||++||+||.+++|||++                  .|. +.++|++|+++++.+ .|..  ..
T Consensus        30 ~~~gad~iE~Dv~lTkDg~lVv~HD~~~drt~~~------------------~~~-~~~~~~~~~~~~~~~-~~~~--~~   87 (257)
T COG0584          30 AEQGADYIELDVQLTKDGVLVVIHDETLDRTTNG------------------LGT-VRDLTLAELKRLDAG-SFRI--PT   87 (257)
T ss_pred             HHcCCCEEEeeccCccCCcEEEecccchhhhccC------------------ccc-cccCChhhhcCcccC-cccC--CC
Confidence            3467889999999999999999999999999999                  777 889999999999965 3332  33


Q ss_pred             CCCCCCCCChhhhhHHHH------HhcC-------cc-HHHHHHHHHHHcC----CceEEEeCCChHHHHHhhhhcCCCC
Q 005894           85 FDNTQPIPTPDTIYDLFY------SQHN-------IS-AAKYITEYLQKLI----SNVYYISSPEIGFLKTMDRKVDHNT  146 (671)
Q Consensus        85 f~~~~~IptL~ev~~~~~------~~~~-------~~-~~~~v~~~l~~~~----~~~~~isSf~~~~L~~i~~~~~~~~  146 (671)
                      |  ++.+|+|+|+....-      .+.+       .. +...++..+.+..    ..++++|||++..|+.+++ ..| .
T Consensus        88 ~--~~~ip~l~~~l~~~~~~~~l~ieiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Sf~~~~l~~~~~-~~p-~  163 (257)
T COG0584          88 F--GEEIPTLEELLEATGRKIGLYIEIKSPGFHPQEGKILAALLALLKRYGGTAADDRVILSSFDHAALKRIKR-LAP-D  163 (257)
T ss_pred             C--CCccCCHHHHHHHhcccCCeEEEecCCCcccchhhhHHHHHHHHHHhcccCCCCceEEEecCHHHHHHHHH-hCc-C
Confidence            3  599999999966441      1111       11 3566666666653    3689999999999999996 445 4


Q ss_pred             cceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCC
Q 005894          147 TKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAND  226 (671)
Q Consensus       147 ~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~  226 (671)
                      .++++.+.....      -........+..+..++.++.+.+..+-+.         .+.+|..+|..|+.|++|||+++
T Consensus       164 ~~~~~l~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~gl~v~~~tv~~~  228 (257)
T COG0584         164 LPLGLLLDATDQ------YDWMELPRALKEVALYADGVGPDWAMLAEL---------LTELVDDAHAAGLKVHVWTVNEE  228 (257)
T ss_pred             CceEEEEcccch------hhhhhccchhhHHHhhhcccCcccceeccc---------ccHHHHHHHhCCCeEEEEecCcH
Confidence            788865432210      001111235666788888888776655221         25799999999999999999998


Q ss_pred             cccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894          227 IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA  266 (671)
Q Consensus       227 ~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~  266 (671)
                      ..            +..+.+.|   |||++||+|......
T Consensus       229 ~~------------~~~~~~~g---vd~i~td~p~~~~~~  253 (257)
T COG0584         229 DD------------IRLLLEAG---VDGLITDFPDLAVAF  253 (257)
T ss_pred             HH------------HHHHHHcC---CCEEEcCCHHHHHHh
Confidence            64            77889999   999999999987653

>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases

Probab=99.85  E-value=1.9e-20  Score=181.06  Aligned_cols=186  Identities=15%  Similarity=0.130  Sum_probs=129.0

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFD  351 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~d  351 (671)
                      ||||||       ||++||++|++.  |+||+|||+| ||++||+||.+++                             
T Consensus         1 IiAHRG-------NTl~AF~~A~~~--dgvE~DVr~t-Dg~lVV~HD~~l~-----------------------------   41 (192)
T cd08584           1 IIAHRG-------NTITALKRTFEN--FGVETDIRDY-GGQLVISHDPFVK-----------------------------   41 (192)
T ss_pred             CCccch-------HHHHHHHHHHHC--CEEEEEEEee-CCeEEEECCCCCC-----------------------------
Confidence            589999       999999999999  9999999999 9999999999651                             


Q ss_pred             CCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHH
Q 005894          352 LTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKAL  431 (671)
Q Consensus       352 lT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l  431 (671)
                                                        ++|||+|+|+++++.   .++||||..         .+++++.+++
T Consensus        42 ----------------------------------~~PtLeEvL~~~~~~---~l~inIK~~---------~l~~~l~~li   75 (192)
T cd08584          42 ----------------------------------NGELLEDWLKEYNHG---TLILNIKAE---------GLELRLKKLL   75 (192)
T ss_pred             ----------------------------------CCCCHHHHHHhcccc---cEEEEECch---------hHHHHHHHHH
Confidence                                              269999999999765   589999943         4778999999


Q ss_pred             HhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccch
Q 005894          432 SNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNAT  510 (671)
Q Consensus       432 ~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~  510 (671)
                      ++++..    ++++++||++..+++++.- +.+-+...-.+    ..+..+   .-+...-++|.+....     ...+.
T Consensus        76 ~~~~~~----~~vi~ssf~~~~l~~~~~~~~~i~tr~Se~E----~~~~~~---~~~~~~~~VW~D~f~~-----~~~~~  139 (192)
T cd08584          76 AEYGIT----NYFFLDMSVPDIIKYLENGEKRTATRVSEYE----PIPTAL---SLYEKADWVWIDSFTS-----LWLDN  139 (192)
T ss_pred             HhcCCc----ceEEEEcCCHHHHHHHhcCCCeeEEeecccc----cchHHH---HhhccccEEEEecccc-----cCCCH
Confidence            999997    7999999999999999876 43333222111    111111   0111222334333222     23467


Q ss_pred             HHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHH--H--hhcCccEEEECChhh
Q 005894          511 NILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATF--A--QGVGVDGITTEFPAT  566 (671)
Q Consensus       511 ~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~--l--~~~GVDgIiTD~P~~  566 (671)
                      +.++.+.++|.++..=...--.        .|-..++..+  +  .+..-++|+||+|..
T Consensus       140 ~~~~~~~~~~~~~c~VSpELh~--------~~~~~~~~~~~~~~~~~~~~~~~CT~~p~~  191 (192)
T cd08584         140 DLILKLLKAGKKICLVSPELHG--------RDHLAEWEAKQYIEFLKENFDALCTKVPDL  191 (192)
T ss_pred             HHHHHHHHCCcEEEEECHHHcC--------CChHHHHHHHHhhhhccccCeeEeccCccc
Confidence            8999999999998765332221        1212233322  1  112368999999975

This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.

>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins

Probab=99.74  E-value=9.3e-18  Score=164.82  Aligned_cols=156  Identities=22%  Similarity=0.221  Sum_probs=111.6

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||+|||+||||++||+||                                                      
T Consensus        22 a~~~g~~~iE~Dv~~tkDg~~vv~Hd------------------------------------------------------   47 (189)
T cd08556          22 ALEAGADGVELDVQLTKDGVLVVIHD------------------------------------------------------   47 (189)
T ss_pred             HHHcCCCEEEEEeeEcCCCCEEEEcC------------------------------------------------------
Confidence            34456789999999999999999999                                                      


Q ss_pred             cCCCCCCCCChhhhhHHHHHh------cC-----ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceEE
Q 005894           84 AFDNTQPIPTPDTIYDLFYSQ------HN-----ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLVF  151 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~~------~~-----~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v~  151 (671)
                             +|||+|++..+...      .+     ..+.+.+++++++++ .++++++||+...++.+++ ..| +.++.+
T Consensus        48 -------i~tL~e~l~~~~~~~~i~leiK~~~~~~~~~~~l~~~i~~~~~~~~v~i~s~~~~~l~~~~~-~~p-~~~~~~  118 (189)
T cd08556          48 -------IPTLEEVLELVKGGVGLNIELKEPTRYPGLEAKVAELLREYGLEERVVVSSFDHEALRALKE-LDP-EVPTGL  118 (189)
T ss_pred             -------CCCHHHHHHhcccCcEEEEEECCCCCchhHHHHHHHHHHHcCCcCCEEEEeCCHHHHHHHHH-hCC-CCcEEE
Confidence                   55555554433221      11     247888999999998 7899999999999999995 556 477776


Q ss_pred             EecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCC
Q 005894          152 MVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSY  231 (671)
Q Consensus       152 ~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~  231 (671)
                      .+........    .+      .......++++.+.+..+            ...+++.+|++|++|++||||+..    
T Consensus       119 ~~~~~~~~~~----~~------~~~~~~~~~~v~~~~~~~------------~~~~i~~~~~~g~~v~~wtvn~~~----  172 (189)
T cd08556         119 LVDKPPLDPL----LA------ELARALGADAVNPHYKLL------------TPELVRAAHAAGLKVYVWTVNDPE----  172 (189)
T ss_pred             EeecCcccch----hh------hHHHhcCCeEEccChhhC------------CHHHHHHHHHcCCEEEEEcCCCHH----
Confidence            5432211100    00      011122355555544322            258999999999999999999864    


Q ss_pred             CCCCChHHHHHHHhhcCceeeeeEeecC
Q 005894          232 SYNFEPEAEYLTFIDNSQFAVDGFITDF  259 (671)
Q Consensus       232 ~~~~d~~~e~~~~i~~g~~~Vdgv~td~  259 (671)
                              +++.+++.|   ||||+||+
T Consensus       173 --------~~~~~~~~G---VdgI~TD~  189 (189)
T cd08556         173 --------DARRLLALG---VDGIITDD  189 (189)
T ss_pred             --------HHHHHHHCC---CCEEecCC
Confidence                    488999999   99999996

The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho

>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins

Probab=99.70  E-value=1.6e-16  Score=166.09  Aligned_cols=208  Identities=15%  Similarity=0.136  Sum_probs=134.8

Q ss_pred             ccccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC-
Q 005894            3 KSNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR-   81 (671)
Q Consensus         3 ~~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r-   81 (671)
                      .+++.++.+||+|||+||||++||+||.+++| |++                  .++ +.|+|++||++++.+ .|+.. 
T Consensus        23 tAsslgad~VE~DVqLTkDgvpVV~HD~~i~~-t~~------------------~~~-V~dlTleqL~~l~~~-~~~~~~   81 (300)
T cd08578          23 TASSLSGEYLRVKVCVLKDGTPVVAPEWFVPV-GGI------------------KLL-VSDLTAEQLESILDY-SLDDLN   81 (300)
T ss_pred             HHHHcCCCEEEEEEEECcCCEEEEECCCceEe-cCC------------------cEE-eecCcHHHHhccCCc-cccccc
Confidence            45678999999999999999999999999977 477                  787 999999999999986 44331 


Q ss_pred             C--------ccCCCCCCCCChhhhhHHHHHhcC--------------------------ccHHHHHHHHHHHcC------
Q 005894           82 S--------EAFDNTQPIPTPDTIYDLFYSQHN--------------------------ISAAKYITEYLQKLI------  121 (671)
Q Consensus        82 ~--------~~f~~~~~IptL~ev~~~~~~~~~--------------------------~~~~~~v~~~l~~~~------  121 (671)
                      .        ..+. ++++|||+|+++.+....+                          ..+++.|++++-++.      
T Consensus        82 ~~~~~~~~~~~~~-~~~~pTL~evL~~lp~~iglNIEIK~P~~~e~~~~~~~~~~~~d~N~fvD~IL~~Vf~har~~~~~  160 (300)
T cd08578          82 SEISDMVDLKRLL-SSRVVSLETLLELLPPSIQLDIQVLFPTAAEIASIPVKGSPLVDLNKFIDTVLLVVFDHARYLRHT  160 (300)
T ss_pred             ccccccchhhhhc-CCcCCCHHHHHHhhccCCeEEEEECCCChHHhhhccccccchhHHHHHHHHHHHHHHHHhhhhccc
Confidence            0        1123 6899999999433321110                          134566777765542      


Q ss_pred             ---CceEEEeCCChHHHHHhhhhcCCCCcceEEEecCCCCc----CCCC------------CCCHHHHhh-cHHHHHHh-
Q 005894          122 ---SNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAV----EPTT------------NQTYGSILK-NLTAIKSF-  180 (671)
Q Consensus       122 ---~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~~~----~~~~------------~~~y~~~~~-~l~~i~~~-  180 (671)
                         ...+++|||+++.-.-++ ...| ..+..|.......-    ...+            .-.|.+... .+...-.| 
T Consensus       161 ~~~~R~IiFSSf~pdiC~~L~-~KQp-~yPV~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~Si~~Av~fA  238 (300)
T cd08578         161 PGSTRSIVFSSCNPEVCTILN-WKQP-NFPVFFAMNGLVRNNDTLSFDTPHHLDSLAVDPQKLNEADPRSRSIKEAVRFA  238 (300)
T ss_pred             CCCCCceEEeeCCHHHHHHHH-hcCC-CCCEEEEecCCccccccccccccccccccccccccccccCchhhhHHHHHHHH
Confidence               357899999998888777 4556 48888754322110    0000            001222211 23333333 


Q ss_pred             ----hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEe
Q 005894          181 ----ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFI  256 (671)
Q Consensus       181 ----a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~  256 (671)
                          .-||..+.+.+          .....+|+.++++||-+++|+-.....            -......|   |||++
T Consensus       239 ~~~nL~Giv~~~~~L----------~~~P~lV~~ik~~GL~lv~~g~~~~~~------------~~~~~~~~---vnG~~  293 (300)
T cd08578         239 KNNNLLGLILPYSLL----------NIVPQLVESIKSRGLLLIASGEPESLI------------EVAEAGDG---INGVV  293 (300)
T ss_pred             HHcCCcEEEecHHHH----------hhChHHHHHHHHcCCEEEEECCCCccc------------cccccccC---CceEE
Confidence                45665554443          223589999999999999999864211            00123346   99999


Q ss_pred             ecC
Q 005894          257 TDF  259 (671)
Q Consensus       257 td~  259 (671)
                      .+.
T Consensus       294 ~~~  296 (300)
T cd08578         294 TED  296 (300)
T ss_pred             eCC
Confidence            864

This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos

>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

Probab=99.66  E-value=4.2e-16  Score=152.46  Aligned_cols=133  Identities=20%  Similarity=0.202  Sum_probs=93.0

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA   84 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~   84 (671)
                      ...+..+||+|||+||||++||+||.+++|+|.                                               
T Consensus        23 ~~~G~~~iE~DV~lt~Dg~lvv~HD~~~~r~~~-----------------------------------------------   55 (179)
T cd08555          23 LDAGARGLELDVRLTKDGELVVYHGPTLDRTTA-----------------------------------------------   55 (179)
T ss_pred             HHcCCCEEEEEEeEcCCCeEEEECCCccccccC-----------------------------------------------
Confidence            356778999999999999999999999999872                                               


Q ss_pred             CCCCCCCCChhhhhHHHHH-------------hc------CccHHHHHHHHHHHcC----CceEEEeCCChHHHHHhhhh
Q 005894           85 FDNTQPIPTPDTIYDLFYS-------------QH------NISAAKYITEYLQKLI----SNVYYISSPEIGFLKTMDRK  141 (671)
Q Consensus        85 f~~~~~IptL~ev~~~~~~-------------~~------~~~~~~~v~~~l~~~~----~~~~~isSf~~~~L~~i~~~  141 (671)
                         ++++|||+|+++.+..             +.      ...+.+.+++.+++++    .++++++||        . .
T Consensus        56 ---~~~~ptl~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sf--------~-~  123 (179)
T cd08555          56 ---GILPPTLEEVLELIADYLKNPDYTIILSLEIKQDSPEYDEFLAKVLKELRVYFDYDLRGKVVLSSF--------N-A  123 (179)
T ss_pred             ---CCCCCCHHHHHHHHHhhhhcCCCceEEEEEeCCCCCcchHHHHHHHHHHHHcCCcccCCCEEEEee--------c-c
Confidence               3445555555333211             01      1246677888888875    258889999        0 0


Q ss_pred             cCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEe
Q 005894          142 VDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYAS  221 (671)
Q Consensus       142 ~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~w  221 (671)
                      +.+.     +  .                    .     ..   . ...            ...++|+.||++|++|++|
T Consensus       124 ~~~~-----~--~--------------------~-----~~---~-~~~------------~~~~~v~~~~~~g~~v~~w  155 (179)
T cd08555         124 LGVD-----Y--Y--------------------N-----FS---S-KLI------------KDTELIASANKLGLLSRIW  155 (179)
T ss_pred             cCCC-----h--h--------------------c-----cc---c-hhh------------cCHHHHHHHHHCCCEEEEE
Confidence            1000     0  0                    0     00   0 011            1258999999999999999


Q ss_pred             eecC-CcccCCCCCCChHHHHHHHhhcCceeeeeEeecC
Q 005894          222 GFAN-DIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDF  259 (671)
Q Consensus       222 tv~~-~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~  259 (671)
                      |||+ +.            +++++++.|   ||||+||+
T Consensus       156 tvn~~~~------------~~~~l~~~G---vd~i~TD~  179 (179)
T cd08555         156 TVNDNNE------------IINKFLNLG---VDGLITDF  179 (179)
T ss_pred             eeCChHH------------HHHHHHHcC---CCEEeCCC
Confidence            9998 64            488999999   99999996

The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph

>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]

Probab=99.42  E-value=1.1e-13  Score=148.00  Aligned_cols=224  Identities=20%  Similarity=0.225  Sum_probs=160.6

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...|+..||||||+||||+.|++||.+.+|++++                  ++- +.++|+.|++++......+...+
T Consensus        92 a~~~Gad~ie~dV~~TsDg~~v~l~d~~~~r~~~v------------------~~~-~~~lt~~e~~~l~~~~~~~~~~~  152 (341)
T KOG2258|consen   92 AIADGADLIELDVQMTSDGVPVILHDSTTVRVTGV------------------PEI-VFDLTWMELRKLGPKIENPFAGP  152 (341)
T ss_pred             HHHcCCcEEEeccccCCCCceEEeecCcceeeecc------------------eee-eccCCHHHHhccCccccCccccc
Confidence            35678999999999999999999999999999999                  665 89999999999988744332111


Q ss_pred             cCCCCCCCCChhhhhH-------HHHHhcCccHHHHHHHHHHHcC-----CceEEEeCCChHHHHHhhhhcCCCCcceEE
Q 005894           84 AFDNTQPIPTPDTIYD-------LFYSQHNISAAKYITEYLQKLI-----SNVYYISSPEIGFLKTMDRKVDHNTTKLVF  151 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~-------~~~~~~~~~~~~~v~~~l~~~~-----~~~~~isSf~~~~L~~i~~~~~~~~~~~v~  151 (671)
                      .+ ..+++|+++|...       .+..++++.+.+.+++.+++.+     ++.+.||||++..|.++++ ..+. ..+..
T Consensus       153 ~~-~~~~~~~l~e~v~~~~~~n~~~l~d~~~~~~~~vl~~l~~~~~~~~~~~kv~v~s~~~~~l~~~~~-~~~~-~~i~~  229 (341)
T KOG2258|consen  153 II-TLEKLLTLAEAVASVVGNNVAMLNDVKLLVVDKVLEALKNATSDFSLYDKVLVQSFNPIVLYRLKK-LDPF-ILIGD  229 (341)
T ss_pred             cc-chhhhccHHHHHHHHHcCChhhhhhhhhhhHHHHHHHHHHHhcCCCccceEEEEecCcHHHHHhcc-CCce-EEecc
Confidence            12 2578899988732       2233334578888888888765     4689999999999999984 4441 11111


Q ss_pred             EecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCc-CCCcHHHHHHHHcCCeEEEeeecCCcccC
Q 005894          152 MVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYL-EPATTLVTDAHNAGLQVYASGFANDIYSS  230 (671)
Q Consensus       152 ~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~-~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~  230 (671)
                       .+..            ..+.....++.++.++..++..+.|..  +... -+.+.++...++.++.|+.+.++++...+
T Consensus       230 -~~~~------------~~ls~~~dik~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~v~~~~~~~e~~~~  294 (341)
T KOG2258|consen  230 -TWRF------------TFLSGIEDIKKRAFAVVSSKLAIFPVS--DSLVLAITKNVVAPLQKLNLVVYVEVFNNEVVLA  294 (341)
T ss_pred             -eecc------------hhhccchhhhcccceeeechHHHHHHH--HHHhhhhhcceeeehhcCCcEEEEEEeeccceee
Confidence             0100            011223456677777777777666643  1222 22237888999999999999999997788


Q ss_pred             CCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894          231 YSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA  266 (671)
Q Consensus       231 ~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~  266 (671)
                      +.|+.++..++..++.+  ..++|..|+++......
T Consensus       295 ~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l  328 (341)
T KOG2258|consen  295 VDFSAAPTIELAGWITN--VGIDGYITDFHLTAPRL  328 (341)
T ss_pred             ccccccCceEeeeeecc--ccccCceeeccchhhHh
Confidence            88988888888888774  23888999988775543

>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases

Probab=99.38  E-value=2.5e-12  Score=129.92  Aligned_cols=212  Identities=14%  Similarity=0.113  Sum_probs=122.9

Q ss_pred             EeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccccccC
Q 005894          273 ITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDL  352 (671)
Q Consensus       273 IAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~dl  352 (671)
                      -+|+=.....|      |..|++.||++||.||+++ ||+++|.||..+.|...                     .+.++
T Consensus         4 hsHNDY~r~~P------l~~Al~~g~~svEaDV~l~-dg~l~V~Hd~~~l~~~~---------------------tl~~L   55 (228)
T cd08577           4 HSHNDYWRKRP------LYDALSAGFGSIEADVWLV-NGDLLVAHDEVDLSPAR---------------------TLESL   55 (228)
T ss_pred             ccccccccccc------hHHHHHcCCCEEEEeEEEE-CCEEEEEcChhHcCccC---------------------CHHHH
Confidence            45666555544      7789999999999999999 99999999998876622                     57899


Q ss_pred             CHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHH
Q 005894          353 TWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALS  432 (671)
Q Consensus       353 T~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~  432 (671)
                      ++++|.++-....             +.+      .       ..++ ....++||||......    ..++..+++.++
T Consensus        56 yl~pL~~~l~~~n-------------~~~------~-------~~~~-~~l~LlIDiKt~g~~t----~~~l~~~L~~~~  104 (228)
T cd08577          56 YLDPLLEILDQNN-------------GQA------Y-------NDPE-QPLQLLIDIKTDGEST----YPALEEVLKPYI  104 (228)
T ss_pred             hHHHHHHHHHHcC-------------CCC------C-------CCCC-CceEEEEEECCCChHH----HHHHHHHHHHHH
Confidence            9999988553311             111      0       1111 2257999999764321    246677777787


Q ss_pred             hcCCCCC------CCceEEEEcCChHHHHHHhcCCCceEEEEeecccC-CCChhHHHHHH-----HHHHHhcCCceeeec
Q 005894          433 NATFDKQ------STQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVS-AAPREVVEEIK-----KYASAVTVTRTSVIS  500 (671)
Q Consensus       433 ~~~~~~~------~~~~vii~Sfd~~~L~~lk~~p~~~~~~l~~~~~~-d~~~~~l~~i~-----~~a~~v~~~~~~v~~  500 (671)
                      +.++...      ..=.|+++.-.+..+. .   ....+...++.... ++.......+.     .|...++.+.....+
T Consensus       105 ~~~~~~~~~~~~~~pvtvV~tGn~p~~~~-~---~~~~r~~f~D~~l~~~~~~~~~~~~~~~~S~~~~~~~~~~~~g~~~  180 (228)
T cd08577         105 DIGYLSYYDKLVPGPVTVVITGNRPKEEV-K---SQYPRYIFFDGRLDEDLPDEQLARLSPMISASFAKFSKWNGKGDTP  180 (228)
T ss_pred             hcCceeecCcEEecCeEEEEeCCCChhhh-c---cccCCeEEEeCChhhccccccccccceEEEccHHHhcCCCCCCCCC
Confidence            7776632      1112444443333321 1   12223333343322 11111110110     122222211111011


Q ss_pred             CCCcccccchHHHHHHHHcCCeEEEEeccC-cccccccccCCChHHHHHHHHhhcCccEEEECC
Q 005894          501 TTESFTTNATNILRDLHSANISVYISALRN-EYLSIAFDYLADPLIEVATFAQGVGVDGITTEF  563 (671)
Q Consensus       501 ~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~-~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~  563 (671)
                      .  .-+..-.++++.+|++|+++.+||+++ +.             .++.+ .++|||+|+||.
T Consensus       181 ~--~q~~~l~~~v~~a~~~Gl~vr~Wtv~~~~~-------------~~~~l-~~~GVd~I~TDd  228 (228)
T cd08577         181 E--DEKEKLKSIIDKAHARGKKVRFWGTPDRPN-------------VWKTL-MELGVDLLNTDD  228 (228)
T ss_pred             H--HHHHHHHHHHHHHHHCCCEEEEEccCChHH-------------HHHHH-HHhCCCEEecCC
Confidence            0  001122357889999999999999976 43             57777 499999999995

This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.

>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins

Probab=99.28  E-value=9.6e-11  Score=119.39  Aligned_cols=223  Identities=16%  Similarity=0.117  Sum_probs=133.1

Q ss_pred             EEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeE-EEecCCCcc--cccCcccccccccccccccccccccc
Q 005894          272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVA-FCLESPDLI--GKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       272 iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~-Vv~HD~~L~--rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +||||       =||+..+.+|++.||..||+||...++|.+ ..+||.--+  |.+...                   .
T Consensus         2 ~iaHm-------Vn~~~~v~~~l~~GANaiE~Dv~f~~~~~~~~~~Hg~pcdc~r~c~~~-------------------~   55 (265)
T cd08576           2 AIAHM-------VNDLEGVDDALDHGANAIEIDVTFWSNGTGWWADHDVPCDCFRGCTAR-------------------E   55 (265)
T ss_pred             cchhh-------hccHHHHHHHHHcCCCceeEEEEEccCCcEEEeeCCCccccccCCcHH-------------------H
Confidence            45666       388999999999999999999999999977 567775321  111100                   1


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      .++-=++++++++..                .                +++ +.+-+.++||.+....+.......+...
T Consensus        56 ~f~~~l~~~r~~ttp----------------g----------------~~~-~l~lv~lDlK~~~~~~~~~~~ag~~la~  102 (265)
T cd08576          56 MFDEILDYRRNGTTP----------------G----------------FRE-NLIFVWLDLKNPDLCGECSINAGRDLAR  102 (265)
T ss_pred             HHHHHHHHHHhcCCC----------------C----------------ccc-eeEEEEEEcCCCCcCHHHHHHHHHHHHH
Confidence            111122333333210                0                111 2356899999887654322222333334


Q ss_pred             HHHHhcCCCCCCCceEEEE--cC---ChHHHHHHhcC-C--Cce------EEEEeecccCCCChhHHHHHHHHHHHhcCC
Q 005894          429 KALSNATFDKQSTQQVMIQ--SD---DSSVLSKFQDV-P--AYK------KVLHIRKEVSAAPREVVEEIKKYASAVTVT  494 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~--Sf---d~~~L~~lk~~-p--~~~------~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~  494 (671)
                      ++|+.++... ...|+.+.  --   +.+.++.|++. .  +..      +++-+..      .+.+..+.+..+..+ .
T Consensus       103 ~ll~~~w~~~-~~~ra~~~~s~~~~~~~~~~~~~~~~l~~~~~~~~~~~kvg~df~~------n~~l~~~~~~~~~~~-~  174 (265)
T cd08576         103 KLLEPYWNGG-SGARALYGFSIPSITDSRFFKGIRDRLNSEEAVSGLLDKVGKDFSG------NEDLEDIRRVYDYGG-D  174 (265)
T ss_pred             HHHHHhhcCC-CCeEEEEEEEeccccchHHHHHHHHHHHhcCchhhHHHhhcccccC------CCChHHHHHHHHhcC-c
Confidence            4555554221 11244332  21   34556666554 1  111      1222211      223666666666654 2


Q ss_pred             ceeeecCCC--c-cc--ccchHHHHHHHHcCC-----eEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECCh
Q 005894          495 RTSVISTTE--S-FT--TNATNILRDLHSANI-----SVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP  564 (671)
Q Consensus       495 ~~~v~~~~~--~-~~--~~~~~~V~~~~~~Gl-----~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P  564 (671)
                       ..++....  + +.  ...+++++.+|++|.     +|++||+|++.             ++++++ ++||||||||+|
T Consensus       175 -~h~w~~dGitnC~~~~~~~~~lv~~~~~rd~~g~i~kV~vWTVn~~~-------------~~~~ll-~~GVDGIITD~P  239 (265)
T cd08576         175 -GHIWQSDGITNCLEKYRTCARLREAIKKRDTPGYLGKVYGWTSDKGS-------------SVRKLL-RLGVDGIITNYP  239 (265)
T ss_pred             -CceecCCCcccccccccccHHHHHHHHHcCCCCcCCeEEEEeCCCHH-------------HHHHHH-hcCCCEEEECCH
Confidence             23443321  1 11  346789999999999     99999999987             888885 999999999999


Q ss_pred             hhHHHHHHhcCC
Q 005894          565 ATASKYFRSKCS  576 (671)
Q Consensus       565 ~~~~~~~~~~~~  576 (671)
                      +.+.+++++...
T Consensus       240 ~~i~~~l~~~~~  251 (265)
T cd08576         240 KRIIDVLKESEF  251 (265)
T ss_pred             HHHHHHHHhccc
Confidence            999998876654

This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline

>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases

Probab=98.80  E-value=2.7e-08  Score=96.90  Aligned_cols=166  Identities=11%  Similarity=0.049  Sum_probs=95.6

Q ss_pred             eEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCccCCCCC
Q 005894           10 AIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEAFDNTQ   89 (671)
Q Consensus        10 ~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~f~~~~   89 (671)
                      .+||+|||+| ||++||+||.+++|+                                                      
T Consensus        19 dgvE~DVr~t-Dg~lVV~HD~~l~~~------------------------------------------------------   43 (192)
T cd08584          19 FGVETDIRDY-GGQLVISHDPFVKNG------------------------------------------------------   43 (192)
T ss_pred             CEEEEEEEee-CCeEEEECCCCCCCC------------------------------------------------------
Confidence            7899999999 999999999999641                                                      


Q ss_pred             CCCChhhhhHHHHH-----hcC-ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceEEEecCCCCcCCC
Q 005894           90 PIPTPDTIYDLFYS-----QHN-ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPT  162 (671)
Q Consensus        90 ~IptL~ev~~~~~~-----~~~-~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~  162 (671)
                        |||+|+++.+..     +.+ ..+++.+++++++++ .++++++||++.+++.++....    ++..+..+.+..+  
T Consensus        44 --PtLeEvL~~~~~~~l~inIK~~~l~~~l~~li~~~~~~~~vi~ssf~~~~l~~~~~~~~----~i~tr~Se~E~~~--  115 (192)
T cd08584          44 --ELLEDWLKEYNHGTLILNIKAEGLELRLKKLLAEYGITNYFFLDMSVPDIIKYLENGEK----RTATRVSEYEPIP--  115 (192)
T ss_pred             --CCHHHHHHhcccccEEEEECchhHHHHHHHHHHhcCCcceEEEEcCCHHHHHHHhcCCC----eeEEeecccccch--
Confidence              444444332211     011 257789999999998 6788999999999999985221    3333333222111  


Q ss_pred             CCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHH
Q 005894          163 TNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYL  242 (671)
Q Consensus       163 ~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~  242 (671)
                         ++       -.+...++|+=+..-+-.+.+         ...+++..++|.+|..   -.++..+-+|.. -+.++ 
T Consensus       116 ---~~-------~~~~~~~~~VW~D~f~~~~~~---------~~~~~~~~~~~~~~c~---VSpELh~~~~~~-~~~~~-  171 (192)
T cd08584         116 ---TA-------LSLYEKADWVWIDSFTSLWLD---------NDLILKLLKAGKKICL---VSPELHGRDHLA-EWEAK-  171 (192)
T ss_pred             ---HH-------HHhhccccEEEEecccccCCC---------HHHHHHHHHCCcEEEE---ECHHHcCCChHH-HHHHH-
Confidence               00       011222444322221111112         4889999999999764   234333333220 11112 


Q ss_pred             HHhhcCceeeeeEeecCCCc
Q 005894          243 TFIDNSQFAVDGFITDFPTT  262 (671)
Q Consensus       243 ~~i~~g~~~Vdgv~td~p~~  262 (671)
                      +.++..+-.-+.|.||+|..
T Consensus       172 ~~~~~~~~~~~~~CT~~p~~  191 (192)
T cd08584         172 QYIEFLKENFDALCTKVPDL  191 (192)
T ss_pred             HhhhhccccCeeEeccCccc
Confidence            22332211257899999975

This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.

>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases

Probab=98.41  E-value=5e-07  Score=91.53  Aligned_cols=48  Identities=8%  Similarity=-0.089  Sum_probs=39.8

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHcccccc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLV   75 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~   75 (671)
                      .+.+...||.||+++ ||+++|.||.++-|....                      +.++++++|.++...
T Consensus        19 l~~g~~svEaDV~l~-dg~l~V~Hd~~~l~~~~t----------------------l~~Lyl~pL~~~l~~   66 (228)
T cd08577          19 LSAGFGSIEADVWLV-NGDLLVAHDEVDLSPART----------------------LESLYLDPLLEILDQ   66 (228)
T ss_pred             HHcCCCEEEEeEEEE-CCEEEEEcChhHcCccCC----------------------HHHHhHHHHHHHHHH
Confidence            355778999999999 999999999999887222                      789999999876544

This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.

>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A

Probab=98.26  E-value=7.6e-07  Score=59.74  Aligned_cols=30  Identities=30%  Similarity=0.523  Sum_probs=23.0

Q ss_pred             eEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChh
Q 005894          522 SVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPA  565 (671)
Q Consensus       522 ~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~  565 (671)
                      +|+.||++++.             .+++++ ++|||||+||+|+
T Consensus         1 kV~~WT~d~~~-------------~~~~~l-~~GVDgI~Td~p~   30 (30)
T PF13653_consen    1 KVYFWTPDKPA-------------SWRELL-DLGVDGIMTDYPD   30 (30)
T ss_dssp             EEEEET--SHH-------------HHHHHH-HHT-SEEEES-HH
T ss_pred             CeEEecCCCHH-------------HHHHHH-HcCCCEeeCCCCC
Confidence            58999999987             788885 9999999999995

>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins

Probab=98.11  E-value=8.5e-06  Score=83.50  Aligned_cols=49  Identities=18%  Similarity=0.301  Sum_probs=43.3

Q ss_pred             CcHHHHHHHHcCC-----eEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          204 ATTLVTDAHNAGL-----QVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       204 ~~~~V~~ah~~Gl-----~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      ...+++.+|++|.     +|++||||+...            ++++++.|   ||||+||+|....+.+
T Consensus       193 ~~~lv~~~~~rd~~g~i~kV~vWTVn~~~~------------~~~ll~~G---VDGIITD~P~~i~~~l  246 (265)
T cd08576         193 CARLREAIKKRDTPGYLGKVYGWTSDKGSS------------VRKLLRLG---VDGIITNYPKRIIDVL  246 (265)
T ss_pred             cHHHHHHHHHcCCCCcCCeEEEEeCCCHHH------------HHHHHhcC---CCEEEECCHHHHHHHH
Confidence            4689999999999     999999998754            88999999   9999999998776644

This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline

>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma

Probab=98.11  E-value=2.9e-06  Score=84.87  Aligned_cols=49  Identities=16%  Similarity=0.213  Sum_probs=43.3

Q ss_pred             EeccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          273 ITHNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       273 IAHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      .+|+=+   ...++|||+.||+.|++.||++||+||+-++||+|||+||.++
T Consensus        15 SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~dgePvV~HG~tl   66 (229)
T cd08592          15 SSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPDGMPIIYHGHTL   66 (229)
T ss_pred             ccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCCCCEEEEeCCcC
Confidence            356543   3568899999999999999999999999999999999999876

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl

>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1

Probab=97.96  E-value=8.4e-06  Score=81.28  Aligned_cols=48  Identities=17%  Similarity=0.212  Sum_probs=42.7

Q ss_pred             eccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          274 THNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       274 AHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      +|+=+   ....+|||++||..|+..||++||+||+-++||+|||+|+.++
T Consensus        16 SHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~dgePvV~Hg~tl   66 (229)
T cd08627          16 SHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTL   66 (229)
T ss_pred             CcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCCCCEEEEeCCcC
Confidence            56543   3457899999999999999999999999999999999999876

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw

>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A

Probab=97.64  E-value=1.7e-05  Score=53.28  Aligned_cols=30  Identities=30%  Similarity=0.513  Sum_probs=22.8

Q ss_pred             eEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCC
Q 005894          217 QVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPT  261 (671)
Q Consensus       217 ~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~  261 (671)
                      +|+.||++++..            ++.+++.|   ||||+||+|.
T Consensus         1 kV~~WT~d~~~~------------~~~~l~~G---VDgI~Td~p~   30 (30)
T PF13653_consen    1 KVYFWTPDKPAS------------WRELLDLG---VDGIMTDYPD   30 (30)
T ss_dssp             EEEEET--SHHH------------HHHHHHHT----SEEEES-HH
T ss_pred             CeEEecCCCHHH------------HHHHHHcC---CCEeeCCCCC
Confidence            699999988755            88999999   9999999983

>KOG2421 consensus Predicted starch-binding protein [General function prediction only]

Probab=97.58  E-value=9.8e-06  Score=89.07  Aligned_cols=58  Identities=22%  Similarity=0.260  Sum_probs=51.0

Q ss_pred             CceEEeccCCCC-------CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccC
Q 005894          269 RPLIITHNGASG-------VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTT  326 (671)
Q Consensus       269 ~p~iIAHRG~s~-------~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~  326 (671)
                      ..+-++|||...       ...|||...+..|.+.|||++|+|||+|+|.++|++||..+.+.-.
T Consensus       324 ~~l~~g~rg~g~sy~~~~~~~~ent~~~~~~~~~~~ad~ve~dvqlt~D~~~vvyh~f~~~~~~~  388 (417)
T KOG2421|consen  324 LSLNTGHRGNGTSYTVLSQVLRENTIVIVDNVLELGADLVEMDVQLTKDLVPVVYHDFVLLVSVI  388 (417)
T ss_pred             hhhhccCCcCCchhhhhhhhhccceeeeehhHHHhhhhHHHhhcccccCCceeeeccceeEEeec
Confidence            457899999753       3579999999999999999999999999999999999998866544

>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein

Probab=97.38  E-value=0.00016  Score=74.07  Aligned_cols=41  Identities=12%  Similarity=0.169  Sum_probs=38.2

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..-+.|+.+|..|+..||++||+||+-++||+|||+|+.++
T Consensus        26 l~~~ss~~~y~~aL~~GcR~vElD~w~g~~gepvV~Hg~tl   66 (260)
T cd08597          26 LRGPSSVEGYVRALQRGCRCVELDCWDGPNGEPVIYHGHTL   66 (260)
T ss_pred             ecCccCHHHHHHHHHhCCCEEEEEeEcCCCCCEEEEeCCcc
Confidence            45678999999999999999999999999999999999876

This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment

>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X

Probab=96.99  E-value=0.00092  Score=62.27  Aligned_cols=43  Identities=14%  Similarity=0.246  Sum_probs=39.7

Q ss_pred             CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          279 SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       279 s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ...+.+|+..+|..+++.|++++|+||+.++||+++++|+.++
T Consensus        23 ~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~~~~~v~Hg~~~   65 (135)
T smart00148       23 KQLWGESSVEGYIQALDHGCRCVELDCWDGPDGEPVIYHGHTF   65 (135)
T ss_pred             ccccCcccHHHHHHHHHhCCCEEEEEcccCCCCCEEEEECCcc
Confidence            4567899999999999999999999999999999999999854

Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.

>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4

Probab=96.36  E-value=0.015  Score=59.62  Aligned_cols=40  Identities=13%  Similarity=0.198  Sum_probs=36.7

Q ss_pred             CCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          282 YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       282 ~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      .-+.|.++|..|+..||..||+|++=-.||+|||+|..++
T Consensus        27 ~~~ss~e~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tl   66 (258)
T cd08631          27 RGQSSVEGYIRALKRGCRCVEVDVWDGPNGEPIVYHGHTF   66 (258)
T ss_pred             cCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCcc
Confidence            4577999999999999999999999999999999998765

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which

>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta

Probab=96.33  E-value=0.015  Score=59.59  Aligned_cols=41  Identities=10%  Similarity=0.090  Sum_probs=37.2

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..-+.+.++|..|+..||..||+||+=-.||+|||+|-.+|
T Consensus        26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tl   66 (257)
T cd08595          26 LVGPSDLDGYVSALRKGCRCLEIDCWDGADNEPVVYHGYTL   66 (257)
T ss_pred             ccCcccHHHHHHHHHhCCcEEEEEeecCCCCCcEEecCCCc
Confidence            35588999999999999999999999999999999997665

This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)

>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3

Probab=96.30  E-value=0.014  Score=59.70  Aligned_cols=41  Identities=15%  Similarity=0.182  Sum_probs=37.0

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..-+.|..+|..|+..||..||+||+=-+||+|||+|-.+|
T Consensus        26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tl   66 (258)
T cd08630          26 IGGPSSTEAYVRAFAQGCRCVELDCWEGPGGEPVIYHGHTL   66 (258)
T ss_pred             ccCcccHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCcc
Confidence            34568999999999999999999999999999999997755

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh

>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1

Probab=96.29  E-value=0.02  Score=58.28  Aligned_cols=40  Identities=10%  Similarity=0.148  Sum_probs=36.4

Q ss_pred             CCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          282 YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       282 ~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      .-+.+..+|..|+..||..||+|++=-.||+|||+|-.++
T Consensus        27 ~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~Tl   66 (253)
T cd08632          27 LSQSKVDMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTL   66 (253)
T ss_pred             cCcccHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCC
Confidence            4577899999999999999999999999999999997655

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m

>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta

Probab=96.13  E-value=0.022  Score=58.53  Aligned_cols=41  Identities=15%  Similarity=0.228  Sum_probs=37.1

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..-+.|..+|..|+..||..||+|++=-.||+|||+|-.++
T Consensus        26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~eP~v~HG~t~   66 (257)
T cd08593          26 LKGPSSTEAYIRALKKGCRCVELDCWDGPDGEPIIYHGHTL   66 (257)
T ss_pred             ccCCccHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCcc
Confidence            45678999999999999999999999999999999997654

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is

>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4

Probab=96.09  E-value=0.022  Score=58.27  Aligned_cols=41  Identities=12%  Similarity=0.088  Sum_probs=36.0

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEcc--CCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSK--EGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTk--DGv~Vv~HD~~L  321 (671)
                      ..-+.+..+|..|+..||..||+||+=-.  ||+|||+|..++
T Consensus        26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tl   68 (257)
T cd08626          26 FGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAM   68 (257)
T ss_pred             ccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCC
Confidence            35578899999999999999999999865  889999997765

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho

>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function

Probab=95.90  E-value=0.85  Score=46.66  Aligned_cols=201  Identities=13%  Similarity=0.194  Sum_probs=115.6

Q ss_pred             chhHHHHHHHHHCCCCeEEeceeEcc------CCeEEEecCCCcccccCcccccccccccccccccccccccccCCHHHH
Q 005894          284 GCTDLAYQQAVDDGADIIDCTVQMSK------EGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEI  357 (671)
Q Consensus       284 ENTl~Af~~Ai~~GaD~IE~DVqlTk------DGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i~dlT~~EL  357 (671)
                      -|+....++|++..+.+||.||.+-+      +++||..|.+..                                    
T Consensus        11 vNsk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP~~------------------------------------   54 (244)
T PF10223_consen   11 VNSKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPPAT------------------------------------   54 (244)
T ss_pred             cCCHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCCCC------------------------------------
Confidence            48889999999999999999999984      678888886521                                    


Q ss_pred             hccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCC
Q 005894          358 QSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFD  437 (671)
Q Consensus       358 ~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~  437 (671)
                                                 ..=.||+|+|+.+.... .||-|++|..         +.++..+++|++..-.
T Consensus        55 ---------------------------~SdltLee~L~~v~~~~-kGIKLDFKs~---------eav~pSl~~L~~~~~~   97 (244)
T PF10223_consen   55 ---------------------------DSDLTLEEWLDEVLSSR-KGIKLDFKSI---------EAVEPSLDLLAKLSDK   97 (244)
T ss_pred             ---------------------------CCcCcHHHHHHHHhccC-cEEEEeccCH---------HHHHHHHHHHHHHhhc
Confidence                                       11246888888777543 4899999975         3455566666653211


Q ss_pred             CCCCceEEE------EcCCh---------HHHHHHhcC-CCceEEEEeecc------cCCCChhHHHHHHHHHHHh-cCC
Q 005894          438 KQSTQQVMI------QSDDS---------SVLSKFQDV-PAYKKVLHIRKE------VSAAPREVVEEIKKYASAV-TVT  494 (671)
Q Consensus       438 ~~~~~~vii------~Sfd~---------~~L~~lk~~-p~~~~~~l~~~~------~~d~~~~~l~~i~~~a~~v-~~~  494 (671)
                      .  ...|.|      ..+..         ..|..+++. |+.-+..-....      -+..+...++++...+..+ .++
T Consensus        98 l--~~PvWiNADIl~Gp~~~~~~~~Vd~~~Fl~~v~~~fP~~tLS~GWTT~~~~~~~~~~Yt~~~v~~M~~l~~~~~~l~  175 (244)
T PF10223_consen   98 L--TRPVWINADILPGPNGPTIPGPVDAKEFLSLVAEKFPHATLSLGWTTRWGPEVPNGGYTWEMVEEMLELCKGINQLP  175 (244)
T ss_pred             c--CCCeeEeeeeccCCCCCCCCcccCHHHHHHHHHHhCCCEEEecCcccccCccCCCccccHHHHHHHHHHHHhhccCC
Confidence            1  023332      22322         256667777 765443322111      1113455566677777661 122


Q ss_pred             ceeeecCCCcccccchHHHHHHHH--cCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHH
Q 005894          495 RTSVISTTESFTTNATNILRDLHS--ANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATAS  568 (671)
Q Consensus       495 ~~~v~~~~~~~~~~~~~~V~~~~~--~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~  568 (671)
                      ...-||.-......+..-+..+-+  ....+-+|+-.+..+        +. .....+....|.+-|..|-|+-..
T Consensus       176 Q~VTFpvRA~l~~~S~~~l~wLL~~s~r~SLTvWs~~~D~v--------~v-~~Ll~lr~~~~~~rVyyDlpe~~~  242 (244)
T PF10223_consen  176 QPVTFPVRAGLARQSWPQLSWLLQQSPRYSLTVWSSKSDPV--------SV-EDLLYLRRNFDKSRVYYDLPEPLR  242 (244)
T ss_pred             CceeeeehhhhhhccHHHHHHHHcCCCCceEEEEecCCCCc--------cH-HHHHHHHHhCCCcEEEEeCChhhh
Confidence            223344322222222233334322  467888998755442        21 134444457999999999987653

>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta

Probab=95.55  E-value=0.016  Score=58.21  Aligned_cols=41  Identities=10%  Similarity=0.156  Sum_probs=37.4

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..-+.+..+|..|+..||..||+|++=-.||+|||+|..++
T Consensus        26 l~~~ss~e~Y~~aL~~GcRcvElD~wdg~~~ePvV~HG~tl   66 (227)
T cd08594          26 LLSQSRVDMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTL   66 (227)
T ss_pred             ccCcccHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCc
Confidence            45578899999999999999999999999999999998765

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,

>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2

Probab=95.38  E-value=0.019  Score=58.47  Aligned_cols=42  Identities=10%  Similarity=0.117  Sum_probs=38.2

Q ss_pred             CCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          280 GVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       280 ~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ...-+.+.++|..|+..||..||+||+=-.||+|||.|..++
T Consensus        25 Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~tl   66 (254)
T cd08633          25 QLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPIVHHGYTL   66 (254)
T ss_pred             ccCCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCc
Confidence            346678899999999999999999999999999999998876

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m

>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins

Probab=95.20  E-value=0.026  Score=56.74  Aligned_cols=41  Identities=15%  Similarity=0.171  Sum_probs=37.5

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      .+-+.|.++|..|+..||..||+|++=-.||+|||+|..++
T Consensus        26 l~~~Ss~~~y~~aL~~GcRcvElD~wdg~~~eP~v~HG~t~   66 (226)
T cd08558          26 LTGESSVEAYIRALLRGCRCVELDCWDGPDGEPVVYHGHTL   66 (226)
T ss_pred             cCCccCHHHHHHHHHhCCcEEEEEeecCCCCCeEEeeCCCC
Confidence            45678899999999999999999999999999999998764

This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki

>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C

Probab=95.19  E-value=0.022  Score=57.36  Aligned_cols=40  Identities=15%  Similarity=0.158  Sum_probs=36.3

Q ss_pred             CCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          282 YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       282 ~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      .-+.|..+|..|+..||..||+||+=-.||+|+|.|..++
T Consensus        27 ~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~ep~V~HG~t~   66 (228)
T cd08599          27 SSRSSTAPIIEALLRGCRVIELDLWPGGRGDICVLHGGTL   66 (228)
T ss_pred             CCccCHHHHHHHHHhCCCEEEEEeecCCCCCeEEEeCCCC
Confidence            4567889999999999999999999999999999998764

This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi

>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon

Probab=95.10  E-value=0.027  Score=57.57  Aligned_cols=41  Identities=12%  Similarity=0.187  Sum_probs=37.6

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..-+.|..+|..|+..||..||+|++=-+||+|||+|..++
T Consensus        26 l~~~ss~~~y~~aL~~GcRcvElD~wdG~~~eP~V~HG~tl   66 (254)
T cd08596          26 LKGESSVELYSQVLLTGCRCVELDCWDGDDGMPIIYHGHTL   66 (254)
T ss_pred             cCCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCc
Confidence            34578899999999999999999999999999999999876

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core

>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2

Probab=95.05  E-value=0.025  Score=57.86  Aligned_cols=40  Identities=13%  Similarity=0.106  Sum_probs=36.7

Q ss_pred             CCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          282 YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       282 ~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      .-+.+..+|..|+..||..||+||+=-.||+|||.|..++
T Consensus        27 ~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~t~   66 (254)
T cd08628          27 RSESSTEAYIRCLRMGCRCIELDCWDGPDGKPIIYHGWTR   66 (254)
T ss_pred             ecCCCHHHHHHHHHcCCcEEEEEeecCCCCCeEEeeCCCc
Confidence            4577889999999999999999999999999999998766

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw

>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1

Probab=95.00  E-value=0.025  Score=57.91  Aligned_cols=41  Identities=10%  Similarity=0.088  Sum_probs=37.4

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..-+.|.++|..|+..||..||+|++=-.||+|||+|..++
T Consensus        26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tl   66 (258)
T cd08629          26 LTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTF   66 (258)
T ss_pred             cCCccCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCC
Confidence            35577899999999999999999999999999999998776

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain

>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C

Probab=94.81  E-value=0.037  Score=55.90  Aligned_cols=41  Identities=15%  Similarity=0.213  Sum_probs=37.0

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      .+-+.|.++|..|+..||..||+||+=-.||+|||+|..++
T Consensus        26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~ep~V~HG~t~   66 (231)
T cd08598          26 LAGDSSVEGYIRALQRGCRCVEIDVWDGDDGEPVVTHGYTL   66 (231)
T ss_pred             cCCccCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCC
Confidence            34578899999999999999999999998999999998765

This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro

>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1

Probab=94.37  E-value=0.04  Score=56.45  Aligned_cols=40  Identities=10%  Similarity=0.102  Sum_probs=35.7

Q ss_pred             CCchhHHHHHHHHHCCCCeEEeceeEcc--CCeEEEecCCCc
Q 005894          282 YAGCTDLAYQQAVDDGADIIDCTVQMSK--EGVAFCLESPDL  321 (671)
Q Consensus       282 ~PENTl~Af~~Ai~~GaD~IE~DVqlTk--DGv~Vv~HD~~L  321 (671)
                      .-+.|.++|.+|+..||..||+|++=-.  ||+|||+|..++
T Consensus        27 ~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tl   68 (258)
T cd08623          27 AGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTM   68 (258)
T ss_pred             CCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCc
Confidence            4577899999999999999999999876  689999999876

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho

>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2

Probab=94.22  E-value=0.051  Score=55.76  Aligned_cols=41  Identities=10%  Similarity=0.086  Sum_probs=36.3

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEcc--CCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSK--EGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTk--DGv~Vv~HD~~L  321 (671)
                      ..-+.|.++|.+|+..||..||+|++=-+  ||+|||.|..++
T Consensus        26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tl   68 (261)
T cd08624          26 FSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTM   68 (261)
T ss_pred             cCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCc
Confidence            34578999999999999999999999753  789999999877

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho

>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta

Probab=94.02  E-value=0.053  Score=55.56  Aligned_cols=41  Identities=12%  Similarity=0.070  Sum_probs=36.6

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccC--CeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKE--GVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkD--Gv~Vv~HD~~L  321 (671)
                      ..-+.+.++|..|+..||..||+|++=-.|  |+|||+|-.++
T Consensus        26 l~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tl   68 (257)
T cd08591          26 FGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTM   68 (257)
T ss_pred             ccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCC
Confidence            345788999999999999999999999775  99999998876

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod

>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3

Probab=93.37  E-value=0.09  Score=54.12  Aligned_cols=41  Identities=15%  Similarity=0.110  Sum_probs=35.9

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEc--cCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMS--KEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlT--kDGv~Vv~HD~~L  321 (671)
                      ..-+.|.+||..|+..||..||+|++=-  .||+|||.|..++
T Consensus        26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~   68 (258)
T cd08625          26 LTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTM   68 (258)
T ss_pred             cCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCcc
Confidence            3567889999999999999999999965  3589999999876

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho

>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]

Probab=91.71  E-value=0.13  Score=59.13  Aligned_cols=41  Identities=12%  Similarity=0.124  Sum_probs=38.7

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..-|.+++||..|+.+||.+||+|.+=-.||.+|++|..++
T Consensus       333 lrSESSleaYar~LrMGCRCIELDCWdGpd~~pvIyHG~T~  373 (1267)
T KOG1264|consen  333 LRSESSLEAYARCLRMGCRCIELDCWDGPDGKPVIYHGHTR  373 (1267)
T ss_pred             cccccCHHHHHHHHHhCCeEEEeecccCCCCCceEEeccce
Confidence            35799999999999999999999999999999999999876

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=91.56  E-value=0.55  Score=54.41  Aligned_cols=50  Identities=14%  Similarity=0.158  Sum_probs=41.5

Q ss_pred             EEeccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          272 IITHNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       272 iIAHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      --+|+-+   .-..-+.+.++|-.|++.||..||+|++=-.+|.|||+|-.+|
T Consensus       301 ~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~Wdg~~~epvV~HG~Tl  353 (746)
T KOG0169|consen  301 SSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCWDGPNGEPVVYHGHTL  353 (746)
T ss_pred             eccccceecccccCCccccHHHHHHHHhCCeEEEEecccCCCCCeeEecCccc
Confidence            3456643   1224489999999999999999999999999999999998766

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=91.21  E-value=0.42  Score=55.07  Aligned_cols=42  Identities=31%  Similarity=0.532  Sum_probs=20.2

Q ss_pred             CCCCCCCCCCcccCcccCCCCCCCC------CCCCCCCCCCCCCCCCC
Q 005894          602 TRPNIIYHPALTVADIVRPPLPPVT------PVSQSAPGSSGLVAPAP  643 (671)
Q Consensus       602 ~~~~~~p~p~l~~~~~~~~p~p~~~------~~~~~~~~~~~~~~~~~  643 (671)
                      =||+++|.|.|.++-=..||=||..      +.+...||++|+|+|||
T Consensus       540 g~pppPppPPlpggag~PPPPpplPg~aG~PPpPppppg~~gppPPPp  587 (1102)
T KOG1924|consen  540 GPPPPPPPPPLPGGAGPPPPPPPLPGIAGGPPPPPPPPGGGGPPPPPP  587 (1102)
T ss_pred             CCCCCCCCCCCCCCCCCCccCCCCCcccCCCCccCCCCCCCCCCCcCC
Confidence            3555556777776554444333332      11333445555444444

>PLN02230 phosphoinositide phospholipase C 4

Probab=89.27  E-value=0.38  Score=55.23  Aligned_cols=42  Identities=12%  Similarity=0.254  Sum_probs=37.5

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLI  322 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~  322 (671)
                      ..-+.|.++|.+|+..||..||+|++=-.+|+|||+|..+|.
T Consensus       139 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~t~t  180 (598)
T PLN02230        139 LSSNCSELPIADALRRGVRVVELDLWPRGTDDVCVKHGRTLT  180 (598)
T ss_pred             ccCccCHHHHHHHHHcCCcEEEEeccCCCCCCcEEeeCCCCc
Confidence            345778899999999999999999998888999999998873

>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family

Probab=87.44  E-value=3.4  Score=40.17  Aligned_cols=143  Identities=16%  Similarity=0.236  Sum_probs=95.2

Q ss_pred             CCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC--C
Q 005894          384 KGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV--P  461 (671)
Q Consensus       384 ~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~--p  461 (671)
                      ...|.+|.+..+.+++.+. .+++.++.-      .|+.--+.-++.|.++.-.    +  =|.|..+..+++.|+.  .
T Consensus        27 ~g~I~~l~~~v~~~~~~gK-~vfVHiDli------~Gl~~D~~~i~~L~~~~~~----d--GIISTk~~~i~~Ak~~gl~   93 (175)
T PF04309_consen   27 TGDIGNLKDIVKRLKAAGK-KVFVHIDLI------EGLSRDEAGIEYLKEYGKP----D--GIISTKSNLIKRAKKLGLL   93 (175)
T ss_dssp             SEECCCHHHHHHHHHHTT--EEEEECCGE------ETB-SSHHHHHHHHHTT------S--EEEESSHHHHHHHHHTT-E
T ss_pred             cCcHHHHHHHHHHHHHcCC-EEEEEehhc------CCCCCCHHHHHHHHHcCCC----c--EEEeCCHHHHHHHHHcCCE
Confidence            4679999999999998753 577777743      2333336678888887633    2  3456789999999988  7


Q ss_pred             CceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHH-cCCeEEEEec-cCccccccccc
Q 005894          462 AYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHS-ANISVYISAL-RNEYLSIAFDY  539 (671)
Q Consensus       462 ~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~-~Gl~V~vwtv-n~~~~~~~~d~  539 (671)
                      .+++.|++++       ..++...+......++.-.+.|..      -+.+++++++ .+.++.+-++ .+++       
T Consensus        94 tIqRiFliDS-------~al~~~~~~i~~~~PD~vEilPg~------~p~vi~~i~~~~~~PiIAGGLI~~~e-------  153 (175)
T PF04309_consen   94 TIQRIFLIDS-------SALETGIKQIEQSKPDAVEILPGV------MPKVIKKIREETNIPIIAGGLIRTKE-------  153 (175)
T ss_dssp             EEEEEE-SSH-------HHHHHHHHHHHHHT-SEEEEESCC------HHHHHCCCCCCCSS-EEEESS--SHH-------
T ss_pred             EEEEeeeecH-------HHHHHHHHHHhhcCCCEEEEchHH------HHHHHHHHHHhcCCCEEeecccCCHH-------
Confidence            7888888754       355555566666777666666642      3567777555 4678888765 4544       


Q ss_pred             CCChHHHHHHHHhhcCccEEEECChhh
Q 005894          540 LADPLIEVATFAQGVGVDGITTEFPAT  566 (671)
Q Consensus       540 ~~D~~~e~~~~l~~~GVDgIiTD~P~~  566 (671)
                            ++.+.+ +.|+++|.|-.++.
T Consensus       154 ------~v~~al-~aGa~aVSTS~~~L  173 (175)
T PF04309_consen  154 ------DVEEAL-KAGADAVSTSNKEL  173 (175)
T ss_dssp             ------HHHHHC-CTTCEEEEE--HHH
T ss_pred             ------HHHHHH-HcCCEEEEcCChHh
Confidence                  788885 99999999988765

Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.

>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]

Probab=86.34  E-value=11  Score=38.90  Aligned_cols=160  Identities=17%  Similarity=0.215  Sum_probs=89.5

Q ss_pred             hHHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHh-hcHH-HHHHhhceecCCCcceeecCCCCCCcCCCcHHHH
Q 005894          132 IGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSIL-KNLT-AIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVT  209 (671)
Q Consensus       132 ~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~-~~l~-~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~  209 (671)
                      .+.++.......+ +.+++..+...+...+..   |.+.+ ...+ .++--+++++..- |+-.... ...+..-...+.
T Consensus        64 ~G~~~~~~~~y~~-dvplivkl~~~t~l~~~~---~~~~~~~~ve~ai~lgadAV~~~V-y~Gse~e-~~~i~~~~~v~~  137 (265)
T COG1830          64 PGIARSVHRGYAH-DVPLIVKLNGSTSLSPDP---NDQVLVATVEDAIRLGADAVGATV-YVGSETE-REMIENISQVVE  137 (265)
T ss_pred             HhHHhhcCccccC-CcCEEEEeccccccCCCc---ccceeeeeHHHHHhCCCcEEEEEE-ecCCcch-HHHHHHHHHHHH
Confidence            6777777755543 466665554443333332   32222 1222 2333355554321 1111111 233444568899


Q ss_pred             HHHHcCCeEEEeeecCCcccCCCCCCCh--HHHHHH-HhhcCceeeeeEeecCCCccc---c---ccCCceEEeccCCCC
Q 005894          210 DAHNAGLQVYASGFANDIYSSYSYNFEP--EAEYLT-FIDNSQFAVDGFITDFPTTAT---E---AIDRPLIITHNGASG  280 (671)
Q Consensus       210 ~ah~~Gl~V~~wtv~~~~~~~~~~~~d~--~~e~~~-~i~~g~~~Vdgv~td~p~~~~---~---~i~~p~iIAHRG~s~  280 (671)
                      +||+.|+.+.+|-.-......-+|..|+  ..-..+ -...|   .|-|-|+||...-   .   +..-|+||| .|.+.
T Consensus       138 ~a~~~Gmp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaaelG---ADIiK~~ytg~~e~F~~vv~~~~vpVvia-GG~k~  213 (265)
T COG1830         138 DAHELGMPLVAWAYPRGPAIKDEYHRDADLVGYAARLAAELG---ADIIKTKYTGDPESFRRVVAACGVPVVIA-GGPKT  213 (265)
T ss_pred             HHHHcCCceEEEEeccCCcccccccccHHHHHHHHHHHHHhc---CCeEeecCCCChHHHHHHHHhCCCCEEEe-CCCCC
Confidence            9999999999997643211111133333  221122 23356   9999999996432   2   234777774 33345


Q ss_pred             CCCchhHHHHHHHHHCCCCeE
Q 005894          281 VYAGCTDLAYQQAVDDGADII  301 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~I  301 (671)
                      .-.+..+.-...|++.||.++
T Consensus       214 ~~~~~~l~~~~~ai~aGa~G~  234 (265)
T COG1830         214 ETEREFLEMVTAAIEAGAMGV  234 (265)
T ss_pred             CChHHHHHHHHHHHHccCcch
Confidence            588999999999999999765

>PLN02228 Phosphoinositide phospholipase C

Probab=86.26  E-value=0.77  Score=52.55  Aligned_cols=42  Identities=19%  Similarity=0.160  Sum_probs=35.7

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCe-EEEecCCCcc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGV-AFCLESPDLI  322 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv-~Vv~HD~~L~  322 (671)
                      ..-+.|.++|..|+..||..||+|++=-.||. |||+|..++-
T Consensus       130 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~p~v~Hg~t~t  172 (567)
T PLN02228        130 VNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLT  172 (567)
T ss_pred             ccCccCHHHHHHHHHcCCcEEEEEeccCCCCCCCEEEeCCccc
Confidence            34577899999999999999999999666665 8999998773

>PLN02952 phosphoinositide phospholipase C

Probab=84.71  E-value=1.1  Score=51.76  Aligned_cols=43  Identities=14%  Similarity=0.306  Sum_probs=36.4

Q ss_pred             CCCCchhHHHHHHHHHCCCCeEEeceeEccCC-eEEEecCCCcc
Q 005894          280 GVYAGCTDLAYQQAVDDGADIIDCTVQMSKEG-VAFCLESPDLI  322 (671)
Q Consensus       280 ~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDG-v~Vv~HD~~L~  322 (671)
                      ...-+.|.++|.+|+..||..||+|++=-.|| .|||+|-.++.
T Consensus       146 Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~p~v~Hg~t~t  189 (599)
T PLN02952        146 QLSSDCSEVPIVKALQRGVRVIELDLWPGSTKDEILVLHGRTLT  189 (599)
T ss_pred             ccCCcCCHHHHHHHHHcCCcEEEEEeecCCCCCCCEEEeCCccc
Confidence            34557889999999999999999999976665 48999998773

>KOG2421 consensus Predicted starch-binding protein [General function prediction only]

Probab=83.97  E-value=0.25  Score=54.72  Aligned_cols=32  Identities=22%  Similarity=0.193  Sum_probs=27.1

Q ss_pred             CCCeEEEeeceeecCCeEEeecCCcccccccc
Q 005894            7 LSNAIMLCNLQFSKDGLGVCLSDVRLNNITTI   38 (671)
Q Consensus         7 ~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~   38 (671)
                      .+..+.|+|||||||.+.|+.||..+..+-..
T Consensus       358 ~~ad~ve~dvqlt~D~~~vvyh~f~~~~~~~~  389 (417)
T KOG2421|consen  358 LGADLVEMDVQLTKDLVPVVYHDFVLLVSVIR  389 (417)
T ss_pred             hhhhHHHhhcccccCCceeeeccceeEEeecc
Confidence            34668899999999999999999988775554

>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma

Probab=83.92  E-value=0.79  Score=46.32  Aligned_cols=26  Identities=12%  Similarity=0.068  Sum_probs=23.0

Q ss_pred             CCeEEEeeceeecCCeEEeecCCccc
Q 005894            8 SNAIMLCNLQFSKDGLGVCLSDVRLN   33 (671)
Q Consensus         8 ~~~~iE~DVqlTkDG~~Vv~HD~~Ld   33 (671)
                      |.-.||+||+-++||++||+||.++.
T Consensus        42 GcR~vElDvwdg~dgePvV~HG~tlt   67 (229)
T cd08592          42 GCRCIELDCWDGPDGMPIIYHGHTLT   67 (229)
T ss_pred             CCCEEEEEeecCCCCCEEEEeCCcCC
Confidence            44579999999999999999998875

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl

>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins

Probab=83.65  E-value=6.1  Score=42.20  Aligned_cols=29  Identities=17%  Similarity=0.258  Sum_probs=24.8

Q ss_pred             chhHHHHHHHHHCCCCeEEeceeEccCCe
Q 005894          284 GCTDLAYQQAVDDGADIIDCTVQMSKEGV  312 (671)
Q Consensus       284 ENTl~Af~~Ai~~GaD~IE~DVqlTkDGv  312 (671)
                      +|+-..+..+++.|+..+|+||+-..+|-
T Consensus        44 ~~s~~~i~~QLd~GvR~LELDv~~d~~gg   72 (324)
T cd08589          44 DYSHPPLADQLDSGVRQLELDVWADPEGG   72 (324)
T ss_pred             cCCCccHHHHHhhCcceEEEEEeecCCcc
Confidence            47788999999999999999999866543

This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy

>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C

Probab=82.05  E-value=1.9  Score=45.10  Aligned_cols=40  Identities=15%  Similarity=0.200  Sum_probs=36.6

Q ss_pred             CCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          282 YAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       282 ~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      +-.+...+|..++..|+.++|+||+-.+|+.++|+|...+
T Consensus        32 ~~~tq~~~~~~qL~~G~R~lDir~~~~~~~~~~v~HG~~~   71 (274)
T cd00137          32 WGLTQTEMYRQQLLSGCRCVDIRCWDGKPEEPIIYHGPTF   71 (274)
T ss_pred             cCcCcHHHHHHHHHcCCcEEEEEeecCCCCCeEEEECCcc
Confidence            3588999999999999999999999999999999998654

This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a

>PLN02223 phosphoinositide phospholipase C

Probab=81.70  E-value=1.3  Score=50.17  Aligned_cols=38  Identities=5%  Similarity=0.006  Sum_probs=32.7

Q ss_pred             chhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          284 GCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       284 ENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      ..|..+|.+|+..||..||+|++=-.++.++|.|-.++
T Consensus       134 ~ss~e~y~~aL~~GcRcvElD~W~~~~~~~~v~hG~tl  171 (537)
T PLN02223        134 LYSIEPIIDALEQGVRVVELDLLPDGKDGICVRPKWNF  171 (537)
T ss_pred             cccHHHHHHHHHcCCcEEEEEecCCCCCCCeEeeCCce
Confidence            38899999999999999999999545556788998776

>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1

Probab=81.02  E-value=1.2  Score=44.99  Aligned_cols=26  Identities=15%  Similarity=0.072  Sum_probs=22.9

Q ss_pred             CCeEEEeeceeecCCeEEeecCCccc
Q 005894            8 SNAIMLCNLQFSKDGLGVCLSDVRLN   33 (671)
Q Consensus         8 ~~~~iE~DVqlTkDG~~Vv~HD~~Ld   33 (671)
                      |--.||+||+-++||++||+||.++.
T Consensus        42 GcR~vElD~wdg~dgePvV~Hg~tlt   67 (229)
T cd08627          42 GCRCIELDCWDGPDGMPVIYHGHTLT   67 (229)
T ss_pred             CCCEEEEEeecCCCCCEEEEeCCcCC
Confidence            44569999999999999999998874

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw

>PLN02222 phosphoinositide phospholipase C 2

Probab=80.62  E-value=1.8  Score=49.85  Aligned_cols=42  Identities=14%  Similarity=0.282  Sum_probs=35.2

Q ss_pred             CCCchhHHHHHHHHHCCCCeEEeceeEccCCe-EEEecCCCcc
Q 005894          281 VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGV-AFCLESPDLI  322 (671)
Q Consensus       281 ~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv-~Vv~HD~~L~  322 (671)
                      ..-+.|.++|.+|+..||..||+|++=-.||. ++|+|-.+|.
T Consensus       127 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~~~v~HG~tlt  169 (581)
T PLN02222        127 LSSDCSEVPIIDALKKGVRVIELDIWPNSDKDDIDVLHGMTLT  169 (581)
T ss_pred             ccCccCHHHHHHHHHcCCcEEEEEeccCCCCCCCeEeeCCccc
Confidence            35578889999999999999999999766665 5799987763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	671
1ydy_A	356	Glycerophosphoryl diester phosphodiesterase; struc	5e-28
1ydy_A	356	Glycerophosphoryl diester phosphodiesterase; struc	5e-19
3i10_A	278	Putative glycerophosphoryl diester phosphodiester;	3e-18
3i10_A	278	Putative glycerophosphoryl diester phosphodiester;	2e-05
3l12_A	313	Putative glycerophosphoryl diester phosphodiester;	6e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
2oog_A	287	Glycerophosphoryl diester phosphodiesterase; phosp	2e-11
2oog_A	287	Glycerophosphoryl diester phosphodiesterase; phosp	1e-06
3mz2_A	292	Glycerophosphoryl diester phosphodiesterase; struc	2e-11
3mz2_A	292	Glycerophosphoryl diester phosphodiesterase; struc	2e-04
1o1z_A	234	GDPD, glycerophosphodiester phosphodiesterase; TM1	7e-10
2pz0_A	252	Glycerophosphoryl diester phosphodiesterase; glyce	6e-09
2otd_A	247	Glycerophosphodiester phosphodiesterase; structura	1e-08
2o55_A	258	Putative glycerophosphodiester phosphodiesterase;	2e-08
1zcc_A	248	Glycerophosphodiester phosphodiesterase; NYSGXRC,	1e-07
3qvq_A	252	Phosphodiesterase OLEI02445; structural genomics,	2e-07
3ks6_A	250	Glycerophosphoryl diester phosphodiesterase; struc	2e-07
3ch0_A	272	Glycerophosphodiester phosphodiesterase; YP_677622	1e-06
3no3_A	238	Glycerophosphodiester phosphodiesterase; structura	8e-06
1vd6_A	224	Glycerophosphoryl diester phosphodiesterase; glyce	2e-05

>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A Length = 356

 Score =  115 bits (288), Expect = 5e-28
 Identities = 67/339 (19%), Positives = 126/339 (37%), Gaps = 49/339 (14%)

Query: 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTA 327
           +  ++I H GASG     T  A   A   GAD ++  + M+K+     L    L   T  
Sbjct: 29  NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDV 88

Query: 328 ATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPII-----RNPEAK 382
           A  F  +A      +K+   ++ D T  EI+SLK   +  FD  N   +     R P  K
Sbjct: 89  ADRFPDRA------RKDGRYYAIDFTLDEIKSLK--FTEGFDIENGKKVQTYPGRFPMGK 140

Query: 383 NKGKFVTLDGFLEFAKTKAVS-----GVLININNAAYLASKKGLGVVDAVTKALSNATFD 437
           +  +  T +  +EF +    S     G+   I    +   ++G  +     + L    + 
Sbjct: 141 SDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHH-QEGKDIAAKTLEVLKKYGYT 199

Query: 438 KQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPR------------------- 478
            +   +V +Q  D+  L + ++    K  + +      A                     
Sbjct: 200 GK-DDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNY 258

Query: 479 ------EVVEEIKKYASAVTVTRTSVIS-TTESFTTNATNILRDLHSANISVYISALRNE 531
                   ++++ +YA  +      +I  T++      T +++D     + V+   +R++
Sbjct: 259 DWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSD 318

Query: 532 YLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY 570
            L    +Y  D            GV+G+ T+FP  A K+
Sbjct: 319 KL---PEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKF 354

>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A Length = 356

 Score = 88.1 bits (218), Expect = 5e-19
 Identities = 48/311 (15%), Positives = 99/311 (31%), Gaps = 74/311 (23%)

Query: 14  CNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQL- 72
            +L  +KD   V L D  L+ +T +   F D+             ++++D+TL+++  L 
Sbjct: 64  QDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDG-------RYYAIDFTLDEIKSLK 116

Query: 73  ---YLVQNVYTRSEAFDNTQP-------IPTPDTIYDLF-------------------YS 103
                      + + +    P       + T +   +                       
Sbjct: 117 FTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPW 176

Query: 104 QHNISAAKYITEYLQKLISNVY-------YISSPEIGFLKTMDRKVDHNTTKLVFMVL-- 154
            H+        + L+ L    Y       Y+   +   LK +  +++      + +V   
Sbjct: 177 FHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLI 236

Query: 155 ---------EPNAVEPTTNQTYGSILK--NLTAIKSFASGIVVPKSYIIPVNNKTRYLEP 203
                    +        N  Y  + K   +  +  +A GI      +I   ++   ++ 
Sbjct: 237 AYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKL 296

Query: 204 ATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFA------VDGFIT 257
            T +V DA    L V+           Y+   +   EY   ++    A      V+G  T
Sbjct: 297 -TGMVQDAQQNKLVVHP----------YTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFT 345

Query: 258 DFPTTATEAID 268
           DFP  A + ++
Sbjct: 346 DFPDKAVKFLN 356

>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482} Length = 278

 Score = 84.5 bits (209), Expect = 3e-18
 Identities = 54/310 (17%), Positives = 104/310 (33%), Gaps = 54/310 (17%)

Query: 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTA 327
           ++ L++ H G        +  A   A+    DI++  +Q +K+G    +    L  +TT 
Sbjct: 16  NKVLVVAHRGNWRSAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTL-DRTTT 74

Query: 328 ATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKF 387
               +                  + T  +I+ LK              +++ + K     
Sbjct: 75  GKGEIK-----------------NWTLADIKKLK--------------LKDKDGKVTNYV 103

Query: 388 V-TLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMI 446
           V TL+  L  AK K    +++N+         K   + D V   L       ++  QV++
Sbjct: 104 VPTLEEALLTAKGK----IMVNL--------DKAYDIFDDVYAILE----KTETQNQVIM 147

Query: 447 QSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFT 506
           +        K +      KVL++   +    +E  + I  Y   +      +I +     
Sbjct: 148 KGGQPIETVKREFGSYLDKVLYMPV-IDLGNKEAEKIITDYLKELRPAAFEIIYSDPKNP 206

Query: 507 TNATNILRDLHSANISVYISALRNEYLSIAFDYLA--DPLIEVATFAQGVGVDGITTEFP 564
                 ++ L      ++ + L         D LA  DP        + +G   + T+ P
Sbjct: 207 LPPK--IKQLLFKKSLIWYNTLWGSLAGNHDDNLALTDPEKSYGYLIEQLGARILQTDQP 264

Query: 565 ATASKYFRSK 574
           A    Y R K
Sbjct: 265 AYLLDYLRKK 274

>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482} Length = 278

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 37/263 (14%), Positives = 75/263 (28%), Gaps = 55/263 (20%)

Query: 16  LQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLV 75
           +Q +KDG  + + D  L+  TT  G  K+                   +TL  + +L   
Sbjct: 53  IQKTKDGQLILMHDNTLDRTTTGKGEIKN-------------------WTLADIKKL--- 90

Query: 76  QNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNI------SAAKYITEYLQK--LISNVYYI 127
             +  +     N   +PT +        +  +           +   L+K    + V   
Sbjct: 91  -KLKDKDGKVTN-YVVPTLEEALLTAKGKIMVNLDKAYDIFDDVYAILEKTETQNQVIMK 148

Query: 128 SSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVP 187
               I  +K   R+      K+++M +    ++    +    I   L  ++  A  I+  
Sbjct: 149 GGQPIETVK---REFGSYLDKVLYMPV----IDLGNKEAEKIITDYLKELRPAAFEIIYS 201

Query: 188 KSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYA---SGFANDIYSSYSYNFEPEAEYLTF 244
                          P    +         ++     G     +       +PE  Y   
Sbjct: 202 -----------DPKNPLPPKIKQLLFKKSLIWYNTLWGSLAGNHDDNLALTDPEKSYGYL 250

Query: 245 IDNSQFAVDGFITDFPTTATEAI 267
           I+          TD P    + +
Sbjct: 251 IEQLG--ARILQTDQPAYLLDYL 271

>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi} Length = 313

 Score = 72.5 bits (178), Expect = 6e-14
 Identities = 44/329 (13%), Positives = 92/329 (27%), Gaps = 60/329 (18%)

Query: 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA 328
              +I H GA GV    T   +   +  G   ++  V M+ +GV     +  L    T  
Sbjct: 17  VVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRD 76

Query: 329 TVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV 388
                   +  ++         ++T+ EI++L   +     ++        +A   G  V
Sbjct: 77  GQGHWLTGAERQV--------AEMTYAEIRALD--VGGLDGRTVYGRRFPDQAFLTGIHV 126

Query: 389 -TLDGFLEFAKTKAVSGVLINI----NNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQ 443
             L   L+           + +    + A          +V AV   +       +   +
Sbjct: 127 PRLGELLDLCAGYGDQAPYLLLELKSDPALMHDHAARAEMVAAVLADVRRY----RMEPR 182

Query: 444 VMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTT 502
            ++ S D ++L + +   P                  + +  +        +   V    
Sbjct: 183 TVMHSFDWALLGECRRQAPDLPTSY------------LSQLPENADDPGEDSAKPVGPDY 230

Query: 503 ESFTTNATNILRDLHSANISVYISALRNEYLSIA-----------------FDYLADPLI 545
           +  T +    +          Y   +  E ++ A                    +A    
Sbjct: 231 DRMTESLPQAVASAGGQLWCPYFLDVTPELVAEAHDLGLIVLTWTVNEPEDIRRMAT--- 287

Query: 546 EVATFAQGVGVDGITTEFPATASKYFRSK 574
                    GVDGI T++P    +     
Sbjct: 288 --------TGVDGIVTDYPGRTQRILIDM 308

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 68.7 bits (167), Expect = 4e-12
 Identities = 58/427 (13%), Positives = 120/427 (28%), Gaps = 103/427 (24%)

Query: 234 NFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHNGASGVYAGCTDLAYQQA 293
           +FE       + D      D F+ +F     + + + ++               +   + 
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSK--------EEIDHIIMSKD 59

Query: 294 VDDGAD-IIDCTVQMSKEGVAFCLES---PD---LIGKTTAATVFMSKATSVPEIQKERG 346
              G   +    +   +E V   +E     +   L+         +      P +     
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP-------IKTEQRQPSMMTRMY 112

Query: 347 IFSFDLTWTEIQSLKP-QISSPFDKSNPPI--IRNP--EAKNKGKFVTLDGFLEFAKT-- 399
           I   D  + + Q      +S        P   +R    E +   K V +DG L   KT  
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRL-----QPYLKLRQALLELR-PAKNVLIDGVLGSGKTWV 166

Query: 400 --KAVS--GVLININNAAYLASKKGLGVVDAVTKALSN--ATFDKQSTQQVMIQS----- 448
                    V   ++   +  + K     + V + L       D   T +    S     
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226

Query: 449 --DDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVE---------------EIKKYASAV 491
                + L +      Y+  L +   V  A  +                  ++  + SA 
Sbjct: 227 IHSIQAELRRLLKSKPYENCLLVLLNVQNA--KAWNAFNLSCKILLTTRFKQVTDFLSAA 284

Query: 492 TVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFA 551
           T T  S+   + + T +     + L    +      L  E L+       +P   ++  A
Sbjct: 285 TTTHISLDHHSMTLTPDEV---KSLLLKYLDCRPQDLPREVLTT------NPRR-LSIIA 334

Query: 552 QGVGVDGITTEFPATASKYFR-----------SKCSDDVEKQDFR-------ILPV---V 590
           + +       +  AT    ++               + +E  ++R       + P    +
Sbjct: 335 ESI------RDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387

Query: 591 PGELLDV 597
           P  LL +
Sbjct: 388 PTILLSL 394

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 1e-06
 Identities = 69/563 (12%), Positives = 154/563 (27%), Gaps = 160/563 (28%)

Query: 58  GWFSVDYTLEQLG-QLYLVQNVYTRSEAFDNTQP-----IPTPDTIYDLFYSQHNISAAK 111
            +       EQ    +     +  R   +++ Q      +        L  +   +  AK
Sbjct: 92  KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151

Query: 112 YITEY--------------------LQKLISNVYYIS-----SPE--IGFLKTMDRKVDH 144
            +                         K+   +++++     SPE  +  L+ +  ++D 
Sbjct: 152 NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211

Query: 145 NTTKLV-FMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYII--PVNNKTRYL 201
           N T            +     +     L+ L   K +          ++   V N  +  
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAE-----LRRLLKSKPY------ENCLLVLLNVQNA-KAW 259

Query: 202 EP----ATTLVT-------DAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQF 250
                    L+T       D  +A    + S   +    + +     E + L        
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHIS--LDHHSMTLT---PDEVKSL-------L 307

Query: 251 A--VDGFITDFPTTATEAIDR-PLIITHNGASGVYAGCTDLA-----YQQAVDDGADIID 302
              +D    D P    E +   P  +     S +     D       ++       D + 
Sbjct: 308 LKYLDCRPQDLPR---EVLTTNPRRL-----SIIAESIRDGLATWDNWKHV---NCDKLT 356

Query: 303 CTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKP 362
             ++ S       LE  +        +VF   +  +P I          L W ++     
Sbjct: 357 TIIESSLN----VLEPAEYRKMFDRLSVFP-PSAHIPTI-------LLSLIWFDVIKSDV 404

Query: 363 Q--ISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKT----KAVSGVLININNA---- 412
              ++     S   + + P    +        +LE         A+   +++  N     
Sbjct: 405 MVVVNKLHKYS--LVEKQP---KESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459

Query: 413 ------------------AY-LASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDD--- 450
                              + L + +    +        +  F +Q      I+ D    
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK-----IRHDSTAW 514

Query: 451 ---SSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT 507
               S+L+  Q +  YK   +I          +V  I  +   +     ++I +      
Sbjct: 515 NASGSILNTLQQLKFYKP--YICDN-DPKYERLVNAILDF---LPKIEENLICSKY---- 564

Query: 508 NATNILR-DLHSANISVYISALR 529
             T++LR  L + + +++  A +
Sbjct: 565 --TDLLRIALMAEDEAIFEEAHK 585

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 1e-04
 Identities = 71/570 (12%), Positives = 158/570 (27%), Gaps = 187/570 (32%)

Query: 26  CLSDVRLNNITTING------------AFKDQQTTKNINGN----NVRGWFSVDYTLEQL 69
            L ++R      I+G                 +    ++      N++   S +  LE L
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202

Query: 70  GQLYLVQNVYTR-----SEAFDNTQPIPTPDTIYDLFYSQHNISAAKYITEYLQKLISNV 124
                 Q +  +     +   D++  I               I + +     L++L+ + 
Sbjct: 203 ------QKLLYQIDPNWTSRSDHSSNIK------------LRIHSIQ---AELRRLLKSK 241

Query: 125 YYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASG- 183
            Y +      L  +    +                           ++N  A  +F    
Sbjct: 242 PYENC-----LLVLL---N---------------------------VQNAKAWNAFNLSC 266

Query: 184 -IVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYL 242
            I++           TR+ +     VTD  +A    + S   +    + +     E + L
Sbjct: 267 KILL----------TTRFKQ-----VTDFLSAATTTHIS--LDHHSMTLT---PDEVKSL 306

Query: 243 TFIDNSQFA--VDGFITDFPTTATEAIDR-PLIITHNGASGVYAGCTDLA-----YQQAV 294
                      +D    D P    E +   P  +     S +     D       ++   
Sbjct: 307 -------LLKYLDCRPQDLP---REVLTTNPRRL-----SIIAESIRDGLATWDNWKHV- 350

Query: 295 DDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFSFDLTW 354
               D +   ++ S       LE  +        +VF   +  +P I          L W
Sbjct: 351 --NCDKLTTIIESSLN----VLEPAEYRKMFDRLSVFP-PSAHIPTI-------LLSLIW 396

Query: 355 TEIQSLKPQ--ISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNA 412
            ++        ++     S   + + P    +        +LE           + + N 
Sbjct: 397 FDVIKSDVMVVVNKLHKYS--LVEKQP---KESTISIPSIYLEL---------KVKLENE 442

Query: 413 AYLASKKGLGVVDA--VTKALSNATFDKQSTQQ-----------VMIQSDDSSVLSK-FQ 458
             L       +VD   + K   +         Q            +   +  ++    F 
Sbjct: 443 YALHRS----IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498

Query: 459 DVPAY----KKVLH--IRKEVSAAPREVVEEIKKYASAVTV---TRTSVISTTESFTTN- 508
           D   +    +K+ H       S +    ++++K Y   +         +++    F    
Sbjct: 499 D---FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKI 555

Query: 509 ATNILRDLHSANISVYISALRNEYLSIAFD 538
             N++   ++ ++ + I AL  E  +I  +
Sbjct: 556 EENLICSKYT-DL-LRI-ALMAEDEAIFEE 582

>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A Length = 287

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 60/313 (19%), Positives = 100/313 (31%), Gaps = 63/313 (20%)

Query: 268 DRPLIITHNGASGVYAGCTDLAYQQAVDD-GADIIDCTVQMSKEGVAFCLESPDLIGKTT 326
           +R   I H GASG     T  AY ++ ++  A  I+  +Q +K+G    +    +  +TT
Sbjct: 22  ERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETV-NRTT 80

Query: 327 AATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGK 386
                +                  D T  E++ L     S F+K  P       +    K
Sbjct: 81  NGHGKVE-----------------DYTLDELKQLD--AGSWFNKKYPK--YARASYKNAK 119

Query: 387 FVTLDGFLEFAKTKAVSGVLINI---NNAAYLASKKGLG--VVDAVTKALSNATFDKQST 441
             TLD  LE             I   +   Y     G+   ++ ++ K       +K   
Sbjct: 120 VPTLDEILERYGPN----ANYYIETKSPDVY----PGMEEQLLASL-KKHHLLNNNKLKN 170

Query: 442 QQVMIQSDDSSVLSKFQDV-PAYKKV-LHIRKEVSAAPREVVEEIKKYASAVTVTRTSVI 499
             VMIQS     L K          V L  + E+     + ++EI+ YA  +    T + 
Sbjct: 171 GHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLT 230

Query: 500 STTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGI 559
                           L      V+              Y  +   ++    +  GVDG+
Sbjct: 231 E----------QNTHHLKDLGFIVHP-------------YTVNEKADMLRLNK-YGVDGV 266

Query: 560 TTEFPATASKYFR 572
            T F     +  +
Sbjct: 267 FTNFADKYKEVIK 279

>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A Length = 287

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 52/286 (18%), Positives = 87/286 (30%), Gaps = 83/286 (29%)

Query: 16  LQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQL--- 72
           LQ +KDG  V + D  +N  T                  N  G    DYTL++L QL   
Sbjct: 60  LQRTKDGHLVAMHDETVNRTT------------------NGHGKVE-DYTLDELKQLDAG 100

Query: 73  --YLVQNVYTRSEAFDNTQPIPTPDTIYDLFYSQHNI-------SAAKYITEYLQKLI-- 121
             +  +       ++ N   +PT D I + +    N             + E L   +  
Sbjct: 101 SWFNKKYPKYARASYKN-AKVPTLDEILERYGPNANYYIETKSPDVYPGMEEQLLASLKK 159

Query: 122 -----------SNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSI 170
                       +V  I S     LK +  + + +   LV +V +    +          
Sbjct: 160 HHLLNNNKLKNGHVM-IQSFSDESLKKI-HRQNKHV-PLVKLVDKGELQQFN-------- 208

Query: 171 LKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSS 230
            + L  I+S+A G+    + +                     + G  V+           
Sbjct: 209 DQRLKEIRSYAIGLGPDYTDLTE------------QNTHHLKDLGFIVHP---------- 246

Query: 231 YSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAIDRPLIITHN 276
             Y    +A+ L       + VDG  T+F     E I       H+
Sbjct: 247 --YTVNEKADMLRLNK---YGVDGVFTNFADKYKEVIKEGHHHHHH 287

>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis} Length = 292

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 51/324 (15%), Positives = 99/324 (30%), Gaps = 72/324 (22%)

Query: 268 DRPLIITHNGASGVYAGC--TDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKT 325
             PLI  H G  G       +   ++  +       +   +++K+ V        L  +T
Sbjct: 30  RIPLISGHRGGRG-KGYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTL-ERT 87

Query: 326 TAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKG 385
           +  T                G  S D TW E+Q+ +              +++PE     
Sbjct: 88  SNGT----------------GKVS-DYTWEELQNFR--------------LKDPEGNITN 116

Query: 386 -KFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLG---VVDAVTKALSNATFDKQST 441
            +  TL+  + +A+ K     ++ ++       KK +        +T          Q+ 
Sbjct: 117 YRIPTLEEAIRWARGK----TILILD-------KKDVPMERTAQLITDM--------QAE 157

Query: 442 QQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVIS 500
             VMI   D +    F +  P +     ++ +         E ++ Y          +  
Sbjct: 158 PYVMITVHDGASARFFYEKNPNFMFEAFVKTK---------EAVQDYEDNGIPWSHIMAY 208

Query: 501 TTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGIT 560
                T     ++  LH   +   IS   ++      +  A    E        GVD I 
Sbjct: 209 VGPKITPEVREVIDMLHERGVMCMISTAPSDDKLSTPESRA----EAYRMIIRQGVDIIE 264

Query: 561 TEFPATASKYFRSKCSDDVEKQDF 584
           ++ P   ++   S       K  F
Sbjct: 265 SDRPIEVAEAISSLIPVSSSKGKF 288

>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis} Length = 292

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 35/268 (13%), Positives = 69/268 (25%), Gaps = 58/268 (21%)

Query: 16  LQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLV 75
            + +KD + V   D  L   +   G   D                   YT E+L      
Sbjct: 68  PRLTKDSVIVLFHDDTLERTSNGTGKVSD-------------------YTWEELQNF--- 105

Query: 76  QNVYTRSEAFDNTQPIPTPDTIYDLFYSQH--NI----SAAKYITEYLQKL-ISNVYYIS 128
             +        N   IPT +        +    +       +   + +  +       I+
Sbjct: 106 -RLKDPEGNITN-YRIPTLEEAIRWARGKTILILDKKDVPMERTAQLITDMQAEPYVMIT 163

Query: 129 SPEIGFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPK 188
             +    +                   PN +       + + +K   A++ +    +   
Sbjct: 164 VHDGASARFFYE-------------KNPNFM-------FEAFVKTKEAVQDYEDNGIPWS 203

Query: 189 SYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNS 248
             +  V  K         ++   H  G+       A       +     E  Y   I   
Sbjct: 204 HIMAYVGPKITPEVRE--VIDMLHERGVMCMI-STAPSDDKLSTPESRAE-AYRMIIR-- 257

Query: 249 QFAVDGFITDFPTTATEAIDRPLIITHN 276
              VD   +D P    EAI   + ++ +
Sbjct: 258 -QGVDIIESDRPIEVAEAISSLIPVSSS 284

>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3 Length = 234

 Score = 58.8 bits (143), Expect = 7e-10
 Identities = 49/307 (15%), Positives = 90/307 (29%), Gaps = 90/307 (29%)

Query: 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTA 327
              +++ H G S  Y   T  A+ +A++ GA+ ++  V++SK+G        DL  +   
Sbjct: 11  HHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDL-KRLFG 69

Query: 328 ATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKF 387
             V +                  D T +E++ L                        GK 
Sbjct: 70  LDVKIR-----------------DATVSELKEL----------------------TDGKI 90

Query: 388 VTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQ 447
            TL    E         + I I         K     DAV +         +  + ++  
Sbjct: 91  TTLKEVFENVSDDK--IINIEI---------KEREAADAVLEIS-------KKRKNLIFS 132

Query: 448 SDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKY-ASAVTVTRTSVISTTESFT 506
           S D  +L +       K    I +E   +    VE ++K    ++ V   +         
Sbjct: 133 SFDLDLLDEKF--KGTKYGYLIDEENYGSIENFVERVEKERPYSLHVPYQAF------EL 184

Query: 507 TNATNILRDLHSANISVYI----SALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTE 562
             A  +LR      I +++           +                      +DG+ T+
Sbjct: 185 EYAVEVLRSFRKKGIVIFVWTLNDPEIYRKIRR-------------------EIDGVITD 225

Query: 563 FPATASK 569
                 K
Sbjct: 226 EVELFVK 232

>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis} Length = 252

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 57/312 (18%), Positives = 103/312 (33%), Gaps = 79/312 (25%)

Query: 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTA 327
            + L+I H G S      T  A+++A++ GAD I+  VQ++K+G    +    +  +TT 
Sbjct: 10  MKTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETV-DRTTN 68

Query: 328 ATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNP--PIIRNPEAKNKG 385
              F+                  D T  EI+ L       F +      I   P      
Sbjct: 69  GEGFVK-----------------DFTLEEIKKLD--AGIKFGEKFAGERI---P------ 100

Query: 386 KFVTLDGFLEFAKTKAVSGVLINI----NNAAYLASKKGLGVVDAVTKALSNATFDKQST 441
              TL    E    K     L+NI        Y       G+ + + KA+     +    
Sbjct: 101 ---TLYEVFELIGDK---DFLVNIEIKSGIVLY------PGIEEKLIKAIK----EYNFE 144

Query: 442 QQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVIS 500
           ++V+I S +   L   + + P  K  L + +     P  +   ++ Y+          + 
Sbjct: 145 ERVIISSFNHYSLRDVKKMAPHLKIGL-LYQCGLVEPWHMALRMEAYS----------LH 193

Query: 501 TTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGIT 560
                      ++       + ++              +  D   ++    +  GVDGI 
Sbjct: 194 PFYFNIIPE--LVEGCKKNGVKLFP-------------WTVDRKEDMERMIK-AGVDGII 237

Query: 561 TEFPATASKYFR 572
           T+ P T     R
Sbjct: 238 TDDPETLINLVR 249

>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri} Length = 247

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 45/312 (14%), Positives = 93/312 (29%), Gaps = 76/312 (24%)

Query: 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA 328
            P I+ H G   +    T  A       G  +I+   ++SK+G  F L   +L  +T+  
Sbjct: 6   YPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNL-ERTSNG 64

Query: 329 TVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV 388
                            G+   +L W ++  +     S + K             KG+ +
Sbjct: 65  W----------------GVAG-ELNWQDLLRVD--AGSWYSK-----------AFKGEPL 94

Query: 389 -TLDGFLEFAKTKAVSGVLINI----NNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQ 443
             L    E  +     G++ NI                 +   +    +   +   +   
Sbjct: 95  PLLSQVAERCREH---GMMANIEIKPTTGTG-------PLTGKMVALAARQLWAGMT--P 142

Query: 444 VMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTT 502
            ++ S +   L   Q   P   + L +  E     RE+   +     ++ +    +    
Sbjct: 143 PLLSSFEIDALEAAQQAAPELPRGL-LLDEWRDDWRELTARL--GCVSIHLNHKLL---D 196

Query: 503 ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTE 562
           ++        +  L  A + + +             Y  +     A   +  GVD I T+
Sbjct: 197 KAR-------VMQLKDAGLRILV-------------YTVNKPQHAAELLR-WGVDCICTD 235

Query: 563 FPATASKYFRSK 574
                   F ++
Sbjct: 236 AIDVIGPNFTAQ 247

>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria} Length = 258

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 38/311 (12%), Positives = 84/311 (27%), Gaps = 73/311 (23%)

Query: 269 RPLIITHNGA--SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCL-ESPDL-IGK 324
            P I+ H G    G+    T  ++   ++     I+  +++ K G       +P+  I  
Sbjct: 6   IPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPF 65

Query: 325 TTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNK 384
               T  +                  DL+  E++ L                        
Sbjct: 66  YKDGTSRIG-----------------DLSLEELKRLD-------------------VGGG 89

Query: 385 GKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQV 444
               +L+      + +    + +N+        +K  G    +   +          ++V
Sbjct: 90  HTIPSLEELFVAIE-EQKFNLKLNLELKGEEWKRKESGDHQRLLLLVE----KYHMQERV 144

Query: 445 MIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKK-YASAVTVTRTSVISTT 502
              S     L+  + + P  K            P + VE+     A+ V++    +   T
Sbjct: 145 DYCSFHHEALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSMLFHYL---T 201

Query: 503 ESFTTNATNILRDLHSANISVY---ISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGI 559
           +         +   H   +SV         +           +           + VD I
Sbjct: 202 KEQ-------VCTAHEKGLSVTVWMPWIFDDSEEDW--KKCLE-----------LQVDLI 241

Query: 560 TTEFPATASKY 570
            + +P     +
Sbjct: 242 CSNYPFGLMNF 252

>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3 Length = 248

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 54/306 (17%), Positives = 93/306 (30%), Gaps = 81/306 (26%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAAT 329
             I++H GA+      T  A   A+  GAD I+  V+ S +GV + +    L  +TT  T
Sbjct: 2   TKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETL-DRTTNGT 60

Query: 330 VFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV- 388
                           G     +  +EI +L       FD            + KG  V 
Sbjct: 61  ----------------GPVG-HMLSSEIDTLD--AGGWFDD-----------RFKGAIVP 90

Query: 389 TLDGFLEFAKTKAVSGVLININNAAYLASKKGLG---VVDAVTKALSNATFDKQSTQQVM 445
            LD +LE  + +A  GV I +         K      V   V              +   
Sbjct: 91  RLDAYLEHLRGRA--GVYIEL---------KYCDPAKVAALVRHL--------GMVRDTF 131

Query: 446 IQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTES 504
             S    +    Q + P +++++     +  A    +     +AS + +T   +      
Sbjct: 132 YFSFSEEMRQGLQSIAPEFRRMM----TLDIAKSPSLVGAVHHASIIEITPAQMRR---- 183

Query: 505 FTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP 564
                  I+     A + + +             Y     + V        VD I  + P
Sbjct: 184 -----PGIIEASRKAGLEIMV-------------YYGGDDMAVHREIATSDVDYINLDRP 225

Query: 565 ATASKY 570
              +  
Sbjct: 226 DLFAAV 231

>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica} Length = 252

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 39/313 (12%), Positives = 89/313 (28%), Gaps = 74/313 (23%)

Query: 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA 328
            P +I H G+SG     T  +   A   G   ++  V +S +G+        L  +TT  
Sbjct: 9   LPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYL-SRTTDG 67

Query: 329 TVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV 388
                            G+        E++ L     S   +           + + + +
Sbjct: 68  D----------------GLIY-KTPLAELKQLD--AGSWKGQ-----------EYQQETI 97

Query: 389 -TLDGFLEFAKTKAVSGVLINI---NNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQV 444
            TL   +E        G+ +N+                 + A  + L            +
Sbjct: 98  PTLLEAIEVISQY---GMGLNLELKPCEGL-----EEETIAASVEVLKQH---WPQDLPL 146

Query: 445 MIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTE 503
           +  S +   L   + + P   +       + +A +E +E +    + + + ++       
Sbjct: 147 LFSSFNYFALVSAKALWPEIARGY-NVSAIPSAWQERLEHLD--CAGLHIHQSFF---DV 200

Query: 504 SFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF 563
                    + D+ +A   V               +  +            G+D + +++
Sbjct: 201 QQ-------VSDIKAAGYKVLA-------------FTINDESLALKLYN-QGLDAVFSDY 239

Query: 564 PATASKYFRSKCS 576
           P        S  +
Sbjct: 240 PQKIQSAIDSHIN 252

>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A* Length = 250

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 35/303 (11%), Positives = 69/303 (22%), Gaps = 71/303 (23%)

Query: 269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAA 328
              I +H G +  +   T   +        + ++  +  + +G       P L   TT  
Sbjct: 2   MTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTL-DATTDM 60

Query: 329 TVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFV 388
           T                G    D+T  ++++    I                        
Sbjct: 61  T----------------GAIV-DMTLAKVKTAT--IRYGAGSHPM--------------- 86

Query: 389 TLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQS 448
           TL+             V         +      G V  V   L          ++    S
Sbjct: 87  TLEELCALYVDS---HVNFRCEIKPGVDGLPYEGFVALVIAGLERH----SMLERTTFSS 139

Query: 449 DDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT 507
              + + +        +  L     +       V E     S   +    + +       
Sbjct: 140 FLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEI-GVHIDTADAGL-- 196

Query: 508 NATNILRDLHSANISVY---ISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFP 564
                +  + +A +           +                  T A  +GV   TT+ P
Sbjct: 197 -----MAQVQAAGLDFGCWAA----HT-------------PSQITKALDLGVKVFTTDRP 234

Query: 565 ATA 567
             A
Sbjct: 235 TLA 237

>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406} Length = 272

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 44/311 (14%), Positives = 87/311 (27%), Gaps = 65/311 (20%)

Query: 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTA 327
               I  H G  G+    T  A+ +A+  G   ++  + +SK+             + T 
Sbjct: 7   ASFDIQGHRGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITM 66

Query: 328 ATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKF 387
                     V E  ++       + + +I+ +   +            + P  K     
Sbjct: 67  MVDG----EDVTEANEKNFNLY-AMNYADIKEID--VGMKTHPRFKSQKKVPAVK----- 114

Query: 388 VTLDGFLEFAKTKAVSGVLINI-----NNAAYLASKKGLGVVDAVTKALSNATFDKQSTQ 442
                 +E A+  +   +  N           +         D V   +  A      T 
Sbjct: 115 PLFRELIETAEKLSAK-IQYNGEIKSTVEGDNIDHPNIALFCDLVVAEIKKA----HITD 169

Query: 443 QVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAV-----TVTRT 496
           +  +QS D   L       P  K    +  E     ++ +E++    +        V++ 
Sbjct: 170 RFTLQSFDVRALEYMHSQYPDIKLSYLV--ETKGTLKKQLEKLSFTPAVYSPDVTLVSKK 227

Query: 497 SVISTTESFTTNATNILRDLHSANISVY---ISALRNEYLSIAFDYLADPLIEVATFAQG 553
            +                  H   + V    +    N    I  + L             
Sbjct: 228 DI---------------DAAHKLGMRVIPWTV----NTKEEI--ETLIS----------- 255

Query: 554 VGVDGITTEFP 564
           +GVDGI T++P
Sbjct: 256 LGVDGIITDYP 266

>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} Length = 238

 Score = 46.8 bits (112), Expect = 8e-06
 Identities = 37/313 (11%), Positives = 92/313 (29%), Gaps = 85/313 (27%)

Query: 268 DRPLIITHNGASGVYAGC--TDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKT 325
           D   +I H G          +  + ++A + GA   +  V ++ + V       D+    
Sbjct: 3   DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDI---- 58

Query: 326 TAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKG 385
                             +        T+ E++ L+                     N  
Sbjct: 59  ------------------QGKHIQ-SCTYDELKDLQ-------------------LSNGE 80

Query: 386 KFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVM 445
           K  TL+ +L+ AK      + +     ++   ++         + +       +  ++  
Sbjct: 81  KLPTLEQYLKRAKKL--KNIRLIFELKSHDTPERNRDAARLSVQMVK----RMKLAKRTD 134

Query: 446 IQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTES 504
             S +     +F  + P  +    +  E+       ++E+             V+ +   
Sbjct: 135 YISFNMDACKEFIRLCPKSEVSY-LNGEL---SPMELKELGFTGLDYHY---KVLQSHPD 187

Query: 505 FTTNATNILRDLHSANISVY---ISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITT 561
           +       ++D     ++     +    ++   +  + + D           +GVD ITT
Sbjct: 188 W-------VKDCKVLGMTSNVWTV----DDPKLM--EEMID-----------MGVDFITT 223

Query: 562 EFPATASKYFRSK 574
           + P    K   S+
Sbjct: 224 DLPEETQKILHSR 236

>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A Length = 224

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 42/308 (13%), Positives = 86/308 (27%), Gaps = 94/308 (30%)

Query: 264 TEAIDRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIG 323
           T    RPL + H GA       T  +++ A++ G D ++  V  +++GV      PD   
Sbjct: 2   TAFRQRPLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDT-- 59

Query: 324 KTTAATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKN 383
                                 G     + + ++++ +P +  P                
Sbjct: 60  --------------------PLGPVF-QVDYADLKAQEPDL--P---------------- 80

Query: 384 KGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQ 443
                 L+  L   +    +   + +        K   G+ +   + L+      +  + 
Sbjct: 81  -----RLEEVLALKEAFPQAVFNVEL--------KSFPGLGEEAARRLAALL---RGREG 124

Query: 444 VMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTT 502
           V + S D   L   +   P           ++     ++  +     AV      V   T
Sbjct: 125 VWVSSFDPLALLALRKAAPGLPLGF----LMAEDHSALLPCLG--VEAVHPHHALV---T 175

Query: 503 ESFTTNATNILRDLHSANISVY---ISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGI 559
           E         +       + V    +    NE        L             +G+DG+
Sbjct: 176 EEA-------VAGWRKRGLFVVAWTV----NEEGEAR--RLLA-----------LGLDGL 211

Query: 560 TTEFPATA 567
             + P   
Sbjct: 212 IGDRPEVL 219

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	671
2pz0_A	252	Glycerophosphoryl diester phosphodiesterase; glyce	100.0
3qvq_A	252	Phosphodiesterase OLEI02445; structural genomics,	100.0
1ydy_A	356	Glycerophosphoryl diester phosphodiesterase; struc	100.0
3ks6_A	250	Glycerophosphoryl diester phosphodiesterase; struc	100.0
2o55_A	258	Putative glycerophosphodiester phosphodiesterase;	100.0
2otd_A	247	Glycerophosphodiester phosphodiesterase; structura	100.0
2oog_A	287	Glycerophosphoryl diester phosphodiesterase; phosp	100.0
3l12_A	313	Putative glycerophosphoryl diester phosphodiester;	100.0
1zcc_A	248	Glycerophosphodiester phosphodiesterase; NYSGXRC,	100.0
3ch0_A	272	Glycerophosphodiester phosphodiesterase; YP_677622	100.0
3no3_A	238	Glycerophosphodiester phosphodiesterase; structura	100.0
3mz2_A	292	Glycerophosphoryl diester phosphodiesterase; struc	100.0
3i10_A	278	Putative glycerophosphoryl diester phosphodiester;	100.0
1o1z_A	234	GDPD, glycerophosphodiester phosphodiesterase; TM1	100.0
1vd6_A	224	Glycerophosphoryl diester phosphodiesterase; glyce	100.0
1xx1_A	285	Smase I, sphingomyelinase I; structure, quick cryo	100.0
1ydy_A	356	Glycerophosphoryl diester phosphodiesterase; struc	99.97
2pz0_A	252	Glycerophosphoryl diester phosphodiesterase; glyce	99.97
2otd_A	247	Glycerophosphodiester phosphodiesterase; structura	99.96
3qvq_A	252	Phosphodiesterase OLEI02445; structural genomics,	99.96
2oog_A	287	Glycerophosphoryl diester phosphodiesterase; phosp	99.96
3ch0_A	272	Glycerophosphodiester phosphodiesterase; YP_677622	99.95
3ks6_A	250	Glycerophosphoryl diester phosphodiesterase; struc	99.95
2o55_A	258	Putative glycerophosphodiester phosphodiesterase;	99.95
3l12_A	313	Putative glycerophosphoryl diester phosphodiester;	99.95
1zcc_A	248	Glycerophosphodiester phosphodiesterase; NYSGXRC,	99.95
3mz2_A	292	Glycerophosphoryl diester phosphodiesterase; struc	99.94
3no3_A	238	Glycerophosphodiester phosphodiesterase; structura	99.93
1o1z_A	234	GDPD, glycerophosphodiester phosphodiesterase; TM1	99.93
3i10_A	278	Putative glycerophosphoryl diester phosphodiester;	99.92
1vd6_A	224	Glycerophosphoryl diester phosphodiesterase; glyce	99.91
3rlg_A	302	Sphingomyelin phosphodiesterase D lisictox-alphai;	99.86
1xx1_A	285	Smase I, sphingomyelinase I; structure, quick cryo	99.85
3rlg_A	302	Sphingomyelin phosphodiesterase D lisictox-alphai;	99.39
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	92.08
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	91.54
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	90.28
3kts_A	192	Glycerol uptake operon antiterminator regulatory;	89.96
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	87.78
1vkf_A	188	Glycerol uptake operon antiterminator-related Pro;	87.58
3h4x_A	339	Phosphatidylinositol-specific phospholipase C1; PI	83.94

>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}

Probab=100.00  E-value=3.1e-48  Score=398.49  Aligned_cols=240  Identities=23%  Similarity=0.286  Sum_probs=203.0

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 ++| .
T Consensus        11 ~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~-----------------~~g-~   72 (252)
T 2pz0_A           11 KTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTN-----------------GEG-F   72 (252)
T ss_dssp             CCEEEEETTTTTTSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSS-----------------CCS-B
T ss_pred             CceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCCcccccCC-----------------CCc-c
Confidence            7899999999999999999999999999999999999999999999999999999999                 788 8


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++|+++  .||+         +.+ .+++||||+|+|+++++.+ ++++||||.....    ...++++|+
T Consensus        73 v~~~t~~eL~~l~~~--~~~~---------~~~-~~~~iPtL~evL~~~~~~~-~~l~iEiK~~~~~----~~~~~~~v~  135 (252)
T 2pz0_A           73 VKDFTLEEIKKLDAG--IKFG---------EKF-AGERIPTLYEVFELIGDKD-FLVNIEIKSGIVL----YPGIEEKLI  135 (252)
T ss_dssp             GGGSCHHHHTTSCSS--TTTC---------GGG-TTCCCCBHHHHHHHHTTSC-CEEEEEECCSSCC----CTTHHHHHH
T ss_pred             hhhCcHHHHhhcCCC--CCCC---------CCC-CCCcCCCHHHHHHHhhhcC-CeEEEEeCCCCcc----cHHHHHHHH
Confidence            999999999999987  4443         344 3589999999999998632 5899999976421    235889999


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT  507 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~  507 (671)
                      ++++++++.    ++++|+||+++.|+++++. |++++++++.....+        ...++..+++  ..+.+..   ..
T Consensus       136 ~~l~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~--------~~~~~~~~~~--~~i~~~~---~~  198 (252)
T 2pz0_A          136 KAIKEYNFE----ERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVE--------PWHMALRMEA--YSLHPFY---FN  198 (252)
T ss_dssp             HHHHHTTCT----TTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSS--------THHHHHHTTC--SEEEEBG---GG
T ss_pred             HHHHhcCCC----CCEEEEeCCHHHHHHHHHHCCCCCEEEEecCcccc--------HHHHHHHcCC--eEEecch---hc
Confidence            999999987    7999999999999999999 999999998654322        1234444444  3455543   34


Q ss_pred             cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894          508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK  574 (671)
Q Consensus       508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~  574 (671)
                      .++++|+.+|++|+.|++||+|++.             ++.+++ ++||||||||+|+.+.+++++.
T Consensus       199 ~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GvdgIiTD~P~~~~~~l~~~  251 (252)
T 2pz0_A          199 IIPELVEGCKKNGVKLFPWTVDRKE-------------DMERMI-KAGVDGIITDDPETLINLVRKG  251 (252)
T ss_dssp             CCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHC--
T ss_pred             CCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HcCCCEEEcCCHHHHHHHHhhc
Confidence            4689999999999999999999987             888885 9999999999999999988643

>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}

Probab=100.00  E-value=4.2e-47  Score=390.02  Aligned_cols=241  Identities=16%  Similarity=0.196  Sum_probs=200.9

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 ++| .
T Consensus         9 ~p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~-----------------~~~-~   70 (252)
T 3qvq_A            9 LPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTD-----------------GDG-L   70 (252)
T ss_dssp             CCSEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSS-----------------CCS-B
T ss_pred             CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCCccccccC-----------------CCc-e
Confidence            6899999999999999999999999999999999999999999999999999999999                 778 8


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++|+++  .||+         +.+ .+++||||+|+|+++++.+ ++++||||......    ..+++.+.
T Consensus        71 v~~~t~~el~~l~~~--~~~~---------~~~-~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~~----~~~~~~v~  133 (252)
T 3qvq_A           71 IYKTPLAELKQLDAG--SWKG---------QEY-QQETIPTLLEAIEVISQYG-MGLNLELKPCEGLE----EETIAASV  133 (252)
T ss_dssp             GGGSCHHHHTTSCSS--TTTC---------GGG-TTCCCCBHHHHHHHHHHTT-CEEEEEECCCTTCH----HHHHHHHH
T ss_pred             eecCcHHHHhcCCCC--CccC---------ccC-CCCcCcCHHHHHHHHhccC-cEEEEEecCCCCcc----HHHHHHHH
Confidence            999999999999987  4443         344 3589999999999998543 58999999643211    14678889


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT  507 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~  507 (671)
                      +++++++...   ++++++||+++.|+++++. |++++++++.....    .    ...++...+.  ..+++..   ..
T Consensus       134 ~~l~~~~~~~---~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~----~----~~~~~~~~~~--~~i~~~~---~~  197 (252)
T 3qvq_A          134 EVLKQHWPQD---LPLLFSSFNYFALVSAKALWPEIARGYNVSAIPS----A----WQERLEHLDC--AGLHIHQ---SF  197 (252)
T ss_dssp             HHHHHHSCTT---SCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCT----T----HHHHHHHHTC--SEEEEEG---GG
T ss_pred             HHHHHhCccc---CCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCch----h----HHHHHHHcCC--eEEecch---hh
Confidence            9999987642   5899999999999999999 99999999854211    1    2234444554  3455533   34


Q ss_pred             cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894          508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK  574 (671)
Q Consensus       508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~  574 (671)
                      .++++|+.+|++|++|++||+|++.             ++.+++ ++||||||||+|+.+.+++++.
T Consensus       198 ~~~~~v~~~~~~G~~v~~WTvn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~l~~~  250 (252)
T 3qvq_A          198 FDVQQVSDIKAAGYKVLAFTINDES-------------LALKLY-NQGLDAVFSDYPQKIQSAIDSH  250 (252)
T ss_dssp             CCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HTTCCEEEESSHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHCCCEEEEEcCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHHHh
Confidence            5689999999999999999999987             899885 9999999999999999998754

>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A

Probab=100.00  E-value=2.2e-47  Score=411.30  Aligned_cols=290  Identities=22%  Similarity=0.289  Sum_probs=218.1

Q ss_pred             CCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894          268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI  347 (671)
Q Consensus       268 ~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~  347 (671)
                      .+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+....|++|...     +|.| 
T Consensus        29 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~f~~~~~~-----~g~~-  102 (356)
T 1ydy_A           29 NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK-----DGRY-  102 (356)
T ss_dssp             CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT-----TSCC-
T ss_pred             CCceEEEeCCCCCCCCcchHHHHHHHHHcCCCEEEeeeEECCCCcEEEeCCChHHhhcCccccccccccc-----CCCc-
Confidence            3789999999999999999999999999999999999999999999999999999999977778887653     3567 


Q ss_pred             ccccCCHHHHhccCCCcCCCCCCC------CCCCCCCcccccCCcccCHHHHHHHHhcc-----CcccEEEEecCchhhh
Q 005894          348 FSFDLTWTEIQSLKPQISSPFDKS------NPPIIRNPEAKNKGKFVTLDGFLEFAKTK-----AVSGVLININNAAYLA  416 (671)
Q Consensus       348 ~i~dlT~~EL~~L~~~~~~~f~~~------~~~~~r~~~~~~~~~ipTLeEvL~~~~~~-----~~~~i~IeIK~~~~~~  416 (671)
                      .|.++||+||++|+++  .||+..      .+ ..|.+....+++||||+|+|+++++.     ..++++||||......
T Consensus       103 ~v~d~T~~eL~~l~~~--~~~~~~~g~~~~~~-~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~  179 (356)
T 1ydy_A          103 YAIDFTLDEIKSLKFT--EGFDIENGKKVQTY-PGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHH  179 (356)
T ss_dssp             BGGGSCHHHHHHSCBC--SCEEEETTEEEESS-TTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHH
T ss_pred             chhhCcHHHHHhCCCC--cccccccccccccc-ccccccccCCCcCCCHHHHHHHHHHhhhcccCCceEEEeecCccccc
Confidence            8999999999999987  343200      00 01222223468999999999999852     2368999999875432


Q ss_pred             hhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC------CCceEEEEeecccC-C--------------
Q 005894          417 SKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV------PAYKKVLHIRKEVS-A--------------  475 (671)
Q Consensus       417 ~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~------p~~~~~~l~~~~~~-d--------------  475 (671)
                       ..+..++++|+++++++++... .++|+|+|||+++|+++|+.      |++++++++..... .              
T Consensus       180 -~~~~~~~~~v~~~l~~~~~~~~-~~~v~i~SF~~~~l~~~~~~~~p~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  257 (356)
T 1ydy_A          180 -QEGKDIAAKTLEVLKKYGYTGK-DDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYN  257 (356)
T ss_dssp             -HTTCCHHHHHHHHHHHTTCCST-TSSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECC
T ss_pred             -ccchhHHHHHHHHHHHcCCCCC-CCCEEEEcCCHHHHHHHHhhcccccCCCceEEEEeccCcccccccccccccccccc
Confidence             2345789999999999998421 16999999999999999986      88999999863210 0              


Q ss_pred             ----CChhHHHHHHHHHHHhcCCceeeecCC-CcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHH
Q 005894          476 ----APREVVEEIKKYASAVTVTRTSVISTT-ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATF  550 (671)
Q Consensus       476 ----~~~~~l~~i~~~a~~v~~~~~~v~~~~-~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~  550 (671)
                          .....++++..+++++++....+.+.. .......+++|+++|++|+.|++||+|++.  ++ +|+.|+...++++
T Consensus       258 ~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~--l~-~~~~d~~~~~~~~  334 (356)
T 1ydy_A          258 YDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDK--LP-EYTPDVNQLYDAL  334 (356)
T ss_dssp             CGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTS--CC-TTCSSHHHHHHHH
T ss_pred             hhhhcchhhHHHHHhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCEEEEEEECccc--cc-ccccCHHHHHHHH
Confidence                012344555445555554433222110 000123478999999999999999999984  33 4667777443654


Q ss_pred             HhhcCccEEEECChhhHHHHH
Q 005894          551 AQGVGVDGITTEFPATASKYF  571 (671)
Q Consensus       551 l~~~GVDgIiTD~P~~~~~~~  571 (671)
                      +.++||||||||+|+.+.+++
T Consensus       335 l~~~GVDgIiTD~P~~~~~~l  355 (356)
T 1ydy_A          335 YNKAGVNGLFTDFPDKAVKFL  355 (356)
T ss_dssp             HTTSCCSEEEESCHHHHHHHH
T ss_pred             HHHcCCCEEEeCCHHHHHHhh
Confidence            469999999999999998876

>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*

Probab=100.00  E-value=4.4e-47  Score=389.33  Aligned_cols=242  Identities=13%  Similarity=0.114  Sum_probs=203.0

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 ++| .
T Consensus         2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~-----------------~~g-~   63 (250)
T 3ks6_A            2 MTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTD-----------------MTG-A   63 (250)
T ss_dssp             CCEEEEETTTHHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBS-----------------CCS-B
T ss_pred             CceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCCccccccC-----------------CCC-e
Confidence            6899999999999999999999999999999999999999999999999999999999                 778 8


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++|+++..                 .+++||||+|+|+++++.+ +.++||||.....  .....++++++
T Consensus        64 v~~~t~~el~~l~~~~~-----------------~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~--~~~~~~~~~v~  123 (250)
T 3ks6_A           64 IVDMTLAKVKTATIRYG-----------------AGSHPMTLEELCALYVDSH-VNFRCEIKPGVDG--LPYEGFVALVI  123 (250)
T ss_dssp             GGGSCHHHHHHCCBTTS-----------------TTCCCEEHHHHHHHHTTCS-CEEEEEECCCTTS--CCCTTHHHHHH
T ss_pred             eecCcHHHHhcCCCCCC-----------------CCccCcCHHHHHHHHhccC-cEEEEEeCCCccc--CcchHHHHHHH
Confidence            99999999999998721                 2478999999999998432 5899999985321  12246899999


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT  507 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~  507 (671)
                      ++++++++.    ++++++||+++.|+++++. |+++++++.....   ....+..+..++...++  ..+++..   ..
T Consensus       124 ~~l~~~~~~----~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~---~~  191 (250)
T 3ks6_A          124 AGLERHSML----ERTTFSSFLLASMDELWKATTRPRLWLVSPSVL---QQLGPGAVIETAIAHSI--HEIGVHI---DT  191 (250)
T ss_dssp             HHHHHTTCG----GGEEEEESCHHHHHHHHHHCCSCEEEEECHHHH---HHHHHHHHHHHHHHTTC--CEEEEEG---GG
T ss_pred             HHHHhcCCC----CCEEEEeCCHHHHHHHHHHCCCCcEEEEecccc---cccchhHHHHHHHhcCC--CEEecch---hh
Confidence            999999987    7999999999999999999 9999987653210   01123345556666665  3455532   44


Q ss_pred             cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894          508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK  574 (671)
Q Consensus       508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~  574 (671)
                      .++++|+.+|++|++|++||+|++.             ++++++ ++||||||||+|+.+.+++++.
T Consensus       192 ~~~~~v~~~~~~G~~V~~WTvn~~~-------------~~~~l~-~~GVDgIiTD~P~~~~~~~~~~  244 (250)
T 3ks6_A          192 ADAGLMAQVQAAGLDFGCWAAHTPS-------------QITKAL-DLGVKVFTTDRPTLAIALRTEH  244 (250)
T ss_dssp             CCHHHHHHHHHTTCEEEEECCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-HcCCCEEEcCCHHHHHHHHHHh
Confidence            5789999999999999999999997             899885 9999999999999999998753

>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}

Probab=100.00  E-value=1.5e-46  Score=387.42  Aligned_cols=241  Identities=13%  Similarity=0.117  Sum_probs=199.9

Q ss_pred             CCceEEeccCCC--CCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCC---CcccccCcccccccccccccccc
Q 005894          268 DRPLIITHNGAS--GVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESP---DLIGKTTAATVFMSKATSVPEIQ  342 (671)
Q Consensus       268 ~~p~iIAHRG~s--~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~---~L~rtT~~~~~f~~r~~~~~~~~  342 (671)
                      .+|+||||||++  +.+||||++||++|++.|||+||||||+||||++||+||.   +|+|+|+                
T Consensus         5 ~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~----------------   68 (258)
T 2o55_A            5 IIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKD----------------   68 (258)
T ss_dssp             CCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTT----------------
T ss_pred             cCceEEECCCCCCCCCCCccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCC----------------
Confidence            478999999999  9999999999999999999999999999999999999999   9999999                


Q ss_pred             cccccccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccC-cccEEEEecCchhhhhhcCC
Q 005894          343 KERGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKA-VSGVLININNAAYLASKKGL  421 (671)
Q Consensus       343 ~~~G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~-~~~i~IeIK~~~~~~~~~~~  421 (671)
                       ++| .|.++||+||++|+++                   .+++||||+|+|+++++.+ .++++||||.....  ....
T Consensus        69 -~~g-~v~~~t~~eL~~l~~~-------------------~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~--~~~~  125 (258)
T 2o55_A           69 -GTS-RIGDLSLEELKRLDVG-------------------GGHTIPSLEELFVAIEEQKFNLKLNLELKGEEWK--RKES  125 (258)
T ss_dssp             -TTC-BGGGSCHHHHTTCBSS-------------------SSCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSS--STTS
T ss_pred             -CCe-ehhhCcHHHHhhcCCC-------------------CCCccCCHHHHHHHhhhhcCceEEEEEEccCCcc--ccch
Confidence             778 8999999999999976                   2579999999999998741 25899999975421  0124


Q ss_pred             cHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEe-ecccCCCChhHHHHHHHHHHHhcCCceeee
Q 005894          422 GVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHI-RKEVSAAPREVVEEIKKYASAVTVTRTSVI  499 (671)
Q Consensus       422 ~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~-~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~  499 (671)
                      .++++++++++++++.    ++++|+||+++.|+.++++ |++++++++ .....+.  ..   ....+...++  ..++
T Consensus       126 ~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~--~~---~~~~~~~~~~--~~v~  194 (258)
T 2o55_A          126 GDHQRLLLLVEKYHMQ----ERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTP--LD---FVEQACYGDA--NGVS  194 (258)
T ss_dssp             SHHHHHHHHHHTTTCG----GGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCC--TT---HHHHHHHTTC--SEEE
T ss_pred             HHHHHHHHHHHHcCCC----CCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCCH--HH---HHHHHHhcCC--eEEe
Confidence            6889999999999987    7999999999999999998 999999998 4322111  11   1112344444  3454


Q ss_pred             cCCCcccccchHHHHHHHHcCCeEEEEec----cCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhcC
Q 005894          500 STTESFTTNATNILRDLHSANISVYISAL----RNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKC  575 (671)
Q Consensus       500 ~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv----n~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~~  575 (671)
                      +..   ...++++|+.+|++|+.|++||+    |++.             ++.+++ ++||||||||+|..+.+++++.|
T Consensus       195 ~~~---~~~~~~~v~~~~~~G~~v~~wTv~~~~n~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~l~~~~  257 (258)
T 2o55_A          195 MLF---HYLTKEQVCTAHEKGLSVTVWMPWIFDDSEE-------------DWKKCL-ELQVDLICSNYPFGLMNFLSNIS  257 (258)
T ss_dssp             EEG---GGCCHHHHHHHHHTTCEEEEECCTTCCCCHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHTC--
T ss_pred             cCh---hhcCHHHHHHHHHCCCEEEEeeCCCCCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHHHhc
Confidence            432   34568999999999999999999    7776             888884 99999999999999999999888

>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}

Probab=100.00  E-value=1e-46  Score=386.09  Aligned_cols=239  Identities=16%  Similarity=0.179  Sum_probs=196.1

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 ++| .
T Consensus         6 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~-----------------~~g-~   67 (247)
T 2otd_A            6 YPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSN-----------------GWG-V   67 (247)
T ss_dssp             CCSEEETTTTTTSSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSS-----------------CCS-B
T ss_pred             CCeEEECCCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCccccCC-----------------CCc-c
Confidence            5789999999999999999999999999999999999999999999999999999999                 788 8


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++|+++  .||+         +.+ .+++||||+|+|+++++.+ +.++||||......    ..++++++
T Consensus        68 v~~~t~~eL~~l~~g--~~~~---------~~~-~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~~----~~~~~~v~  130 (247)
T 2otd_A           68 AGELNWQDLLRVDAG--SWYS---------KAF-KGEPLPLLSQVAERCREHG-MMANIEIKPTTGTG----PLTGKMVA  130 (247)
T ss_dssp             GGGSCHHHHTTCCSS--TTTC---------GGG-TTCCCCBHHHHHHHHHHTT-CEEEEEECCCTTCH----HHHHHHHH
T ss_pred             HhhCcHHHHhhCCCC--CccC---------CCC-CCCcCCCHHHHHHHHHhcC-CEEEEEECCCCCcc----hHHHHHHH
Confidence            999999999999987  4444         334 3589999999999998532 58999999764321    13667899


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT  507 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~  507 (671)
                      ++++++....   .+++++||+++.|+.+++. |++++++++.....+        +..++...++  ..+++..   ..
T Consensus       131 ~~l~~~~~~~---~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~--------~~~~~~~~~~--~~i~~~~---~~  194 (247)
T 2otd_A          131 LAARQLWAGM---TPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDD--------WRELTARLGC--VSIHLNH---KL  194 (247)
T ss_dssp             HHHHHHTTTS---CCCEEEESCHHHHHHHHHHCTTSCEEEEESSCCTT--------HHHHHHHHTC--SEEEEEG---GG
T ss_pred             HHHHHHhcCc---CCEEEEcCCHHHHHHHHHHCCCCCEEEEecCCccc--------HHHHHHHcCC--eEEecCh---Hh
Confidence            9998872111   3899999999999999998 999999998643211        1234444544  3455433   33


Q ss_pred             cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHH
Q 005894          508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFR  572 (671)
Q Consensus       508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~  572 (671)
                      .++++|+.+|++|+.|++||+|++.             ++.+++ ++||||||||+|..+.++++
T Consensus       195 ~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~l~  245 (247)
T 2otd_A          195 LDKARVMQLKDAGLRILVYTVNKPQ-------------HAAELL-RWGVDCICTDAIDVIGPNFT  245 (247)
T ss_dssp             CCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HHTCSEEEESCTTTSCTTCC
T ss_pred             CCHHHHHHHHHCCCEEEEEccCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHh
Confidence            4689999999999999999999987             888885 99999999999998876543

>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A

Probab=100.00  E-value=4.8e-47  Score=397.01  Aligned_cols=249  Identities=22%  Similarity=0.250  Sum_probs=200.5

Q ss_pred             CCceEEeccCCCCCCCchhHHHHHHH-HHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccc
Q 005894          268 DRPLIITHNGASGVYAGCTDLAYQQA-VDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERG  346 (671)
Q Consensus       268 ~~p~iIAHRG~s~~~PENTl~Af~~A-i~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G  346 (671)
                      .+|+||||||+++.+||||++||++| ++.|||+||||||+||||++||+||.+|+|+|+                 ++|
T Consensus        22 ~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~-----------------~~g   84 (287)
T 2oog_A           22 ERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTN-----------------GHG   84 (287)
T ss_dssp             CSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSS-----------------CCS
T ss_pred             CcceEEecCCCCCCCCchhHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCChhcccCC-----------------CCe
Confidence            37899999999999999999999999 699999999999999999999999999999999                 788


Q ss_pred             cccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHH
Q 005894          347 IFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDA  426 (671)
Q Consensus       347 ~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~  426 (671)
                       .|.++||+||++|+++  .||+.. .|..+.+.+ .+++||||+|+|+++++.  ++++||||....     ...++++
T Consensus        85 -~v~d~T~~eL~~l~~~--~~f~~~-~p~~~~~~~-~~~~iPtL~evL~~~~~~--~~l~IEiK~~~~-----~~~~~~~  152 (287)
T 2oog_A           85 -KVEDYTLDELKQLDAG--SWFNKK-YPKYARASY-KNAKVPTLDEILERYGPN--ANYYIETKSPDV-----YPGMEEQ  152 (287)
T ss_dssp             -BGGGSCHHHHTTSCSS--HHHHHH-CGGGCCGGG-TTCCCCBHHHHHHHHCTT--SCEEEECCCTTT-----STTHHHH
T ss_pred             -ehhhCcHHHHHhcCCC--cccCcc-Ccccccccc-CCccCCCHHHHHHhhCcC--ceEEEEECCCCC-----cchHHHH
Confidence             8999999999999987  333210 001112233 358999999999999764  689999997542     2257899


Q ss_pred             HHHHHHhcCC-------CCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccC-CCChhHHHHHHHHHHHhcCCcee
Q 005894          427 VTKALSNATF-------DKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVS-AAPREVVEEIKKYASAVTVTRTS  497 (671)
Q Consensus       427 v~~~l~~~~~-------~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~-d~~~~~l~~i~~~a~~v~~~~~~  497 (671)
                      |+++++++++       .    ++++|+||+++.|+++++. |++++++++..... ......++.+..++       ..
T Consensus       153 v~~~l~~~~~~~~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~  221 (287)
T 2oog_A          153 LLASLKKHHLLNNNKLKN----GHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYA-------IG  221 (287)
T ss_dssp             HHHHHHHTTCSSHHHHHT----TSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTC-------SE
T ss_pred             HHHHHHHcCCcccccCCC----CCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhh-------eE
Confidence            9999999998       5    6999999999999999998 99999999864321 12222333322222       22


Q ss_pred             eecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHh
Q 005894          498 VISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRS  573 (671)
Q Consensus       498 v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~  573 (671)
                      +.+..   ...++++|+.+|++|+.|++||+|++.             ++.+++ ++||||||||+|+.+.++++.
T Consensus       222 v~~~~---~~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~~~~  280 (287)
T 2oog_A          222 LGPDY---TDLTEQNTHHLKDLGFIVHPYTVNEKA-------------DMLRLN-KYGVDGVFTNFADKYKEVIKE  280 (287)
T ss_dssp             EEEBG---GGCCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHC
T ss_pred             EcccH---hhcCHHHHHHHHHCCCeEEEEeCCCHH-------------HHHHHH-HcCCCEEEeCCHHHHHHHHhc
Confidence            33322   334678999999999999999999987             899885 999999999999999998865

>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}

Probab=100.00  E-value=3.1e-45  Score=387.92  Aligned_cols=271  Identities=15%  Similarity=0.195  Sum_probs=204.3

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccc--cccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQ--KERG  346 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~--~~~G  346 (671)
                      +++||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+..+          ++.  .+.+
T Consensus        17 ~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~----------~G~~~~~~~   86 (313)
T 3l12_A           17 VVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDG----------QGHWLTGAE   86 (313)
T ss_dssp             BCEEEEETTTTTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCT----------TSCBCCSSC
T ss_pred             CeEEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCchhcccccccC----------CCcccCCCC
Confidence            6889999999999999999999999999999999999999999999999999999965211          000  0112


Q ss_pred             cccccCCHHHHhccCCCcCC---CCCCCCCCCCCCcccccCCcccCHHHHHHHHhccC--cccEEEEecCchhhhhh--c
Q 005894          347 IFSFDLTWTEIQSLKPQISS---PFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKA--VSGVLININNAAYLASK--K  419 (671)
Q Consensus       347 ~~i~dlT~~EL~~L~~~~~~---~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~--~~~i~IeIK~~~~~~~~--~  419 (671)
                      ..|.++||+||++|+++...   ||+..    +.......+++||||+|+|+++++.+  .++++||||........  .
T Consensus        87 ~~v~~~t~~eL~~l~~~~~~~~~~~~~~----~~~~~~~~g~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~~~~~~~~  162 (313)
T 3l12_A           87 RQVAEMTYAEIRALDVGGLDGRTVYGRR----FPDQAFLTGIHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDHAA  162 (313)
T ss_dssp             CBGGGSCHHHHHTSBCSSCCTTSHHHHH----STTSCCCSSCCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTCHHH
T ss_pred             cchhcCcHHHHhhCCCCCcccccccccc----CccccccCCCcCCCHHHHHHHHHhcCCCCceEEEEEccCCcccccccc
Confidence            38999999999999987311   11100    00000113589999999999998731  36899999986532100  0


Q ss_pred             CCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCCh---hHH----------HHHH
Q 005894          420 GLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPR---EVV----------EEIK  485 (671)
Q Consensus       420 ~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~---~~l----------~~i~  485 (671)
                      ...++++|+++|+++++.    ++++|+||+++.|++++++ |++++++++.........   ...          ..+.
T Consensus       163 ~~~~~~~v~~~l~~~~~~----~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  238 (313)
T 3l12_A          163 RAEMVAAVLADVRRYRME----PRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLP  238 (313)
T ss_dssp             HHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTCCSCHH
T ss_pred             HHHHHHHHHHHHHHcCCC----CCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccccccchhccccHH
Confidence            025789999999999988    7999999999999999998 999999998653210000   000          0012


Q ss_pred             HHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChh
Q 005894          486 KYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPA  565 (671)
Q Consensus       486 ~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~  565 (671)
                      ..+..+++  ..+++.+   ...++++|+.+|++|++|++||+|++.             ++++++ ++||||||||+|+
T Consensus       239 ~~~~~~~~--~~~~~~~---~~~~~~~v~~~~~~Gl~V~~WTVn~~~-------------~~~~l~-~~GVDgIiTD~P~  299 (313)
T 3l12_A          239 QAVASAGG--QLWCPYF---LDVTPELVAEAHDLGLIVLTWTVNEPE-------------DIRRMA-TTGVDGIVTDYPG  299 (313)
T ss_dssp             HHHHHHTC--SEEEEBG---GGCCHHHHHHHHHTTCEEEEBCCCSHH-------------HHHHHH-HHTCSEEEESCHH
T ss_pred             HHHHHhCC--cEEecch---hcCCHHHHHHHHHCCCEEEEEcCCCHH-------------HHHHHH-HcCCCEEEeCCHH
Confidence            23344443  3455543   455789999999999999999999997             899885 9999999999999


Q ss_pred             hHHHHHHhcCC
Q 005894          566 TASKYFRSKCS  576 (671)
Q Consensus       566 ~~~~~~~~~~~  576 (671)
                      .+.+++++++.
T Consensus       300 ~~~~~l~~~g~  310 (313)
T 3l12_A          300 RTQRILIDMGL  310 (313)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHhcCc
Confidence            99999987765

>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3

Probab=100.00  E-value=4.2e-47  Score=389.12  Aligned_cols=236  Identities=15%  Similarity=0.099  Sum_probs=199.5

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+                 ++| .
T Consensus         1 m~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~-----------------~~g-~   62 (248)
T 1zcc_A            1 MTKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTN-----------------GTG-P   62 (248)
T ss_dssp             CCEEEETTTTTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSS-----------------CCS-B
T ss_pred             CCeEEECCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCccccccC-----------------CCc-c
Confidence            4789999999999999999999999999999999999999999999999999999999                 778 7


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++|+++                   +.++||||+|+|+++++.+ +.++||||......    ..++++++
T Consensus        63 v~~~t~~eL~~l~~g-------------------~~~~iptL~evl~~~~~~~-~~l~iEiK~~~~~~----~~~~~~v~  118 (248)
T 1zcc_A           63 VGHMLSSEIDTLDAG-------------------GWFDDRFKGAIVPRLDAYL-EHLRGRAGVYIELK----YCDPAKVA  118 (248)
T ss_dssp             STTSCHHHHTTSCSS-------------------TTTCGGGTTCCCCBHHHHH-HHHTTTCEEEEEEE----ESCHHHHH
T ss_pred             hhhCCHHHHHhCCCC-------------------CCCCCCCHHHHHHHHHhcC-cEEEEEeCCCCCcc----cHHHHHHH
Confidence            999999999999986                   2358999999999998732 57899999764210    12678999


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT  507 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~  507 (671)
                      ++++++++.    ++++|+||+++.|++++++ |++++++++.....         ...++...++  ..+++..   ..
T Consensus       119 ~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~---------~~~~~~~~~~--~~i~~~~---~~  180 (248)
T 1zcc_A          119 ALVRHLGMV----RDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKS---------PSLVGAVHHA--SIIEITP---AQ  180 (248)
T ss_dssp             HHHHHHTCS----TTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSS---------THHHHHTTCC--SEEEECH---HH
T ss_pred             HHHHHhCCC----CCEEEEECCHHHHHHHHHHCCCCcEEEEecCCcc---------HHHHHHHcCC--CEEEecH---HH
Confidence            999999987    7999999999999999998 99999998754311         1234444444  3454432   33


Q ss_pred             c-chHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHH-HHhhcCccEEEECChhhHHHHHHhcCCCC
Q 005894          508 N-ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVAT-FAQGVGVDGITTEFPATASKYFRSKCSDD  578 (671)
Q Consensus       508 ~-~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~-~l~~~GVDgIiTD~P~~~~~~~~~~~~~~  578 (671)
                      . ++++|+.+|++|+.|++||+|++.             ++.+ + .++||||||||+|..+.+++++.|...
T Consensus       181 ~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~~l-~~~GvdgIiTD~p~~~~~~~~~~~~~~  239 (248)
T 1zcc_A          181 MRRPGIIEASRKAGLEIMVYYGGDDM-------------AVHREI-ATSDVDYINLDRPDLFAAVRSGMAELL  239 (248)
T ss_dssp             HHSHHHHHHHHHHTCEEEEECCCCCH-------------HHHHHH-HHSSCSEEEESCHHHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HHcCCCEEEECCHHHHHHHHHHhcchh
Confidence            4 678999999999999999999997             8998 6 599999999999999999998877543

>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=2.6e-45  Score=381.01  Aligned_cols=254  Identities=16%  Similarity=0.169  Sum_probs=196.1

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccc----cCcccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGK----TTAATVFMSKATSVPEIQKE  344 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rt----T~~~~~f~~r~~~~~~~~~~  344 (671)
                      +++||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+    |+....++         ..+
T Consensus         8 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~~---------~~~   78 (272)
T 3ch0_A            8 SFDIQGHRGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTE---------ANE   78 (272)
T ss_dssp             TCEEEETTTTTTTSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCT---------TTG
T ss_pred             cccEEecCCCCCCCCcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCccccc---------ccc
Confidence            57899999999999999999999999999999999999999999999999999994    33110000         012


Q ss_pred             cccccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccC-cccEEEEecCchhhhhh---cC
Q 005894          345 RGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKA-VSGVLININNAAYLASK---KG  420 (671)
Q Consensus       345 ~G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~-~~~i~IeIK~~~~~~~~---~~  420 (671)
                      .++.|.++||+||++|+++  .||+..    ++.... ..++||||+|+|+++++.+ .++++||||........   ..
T Consensus        79 ~~~~v~d~t~~eL~~l~~~--~~~~~~----~~~~~~-~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~  151 (272)
T 3ch0_A           79 KNFNLYAMNYADIKEIDVG--MKTHPR----FKSQKK-VPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNI  151 (272)
T ss_dssp             GGSBGGGSCHHHHTTSCCS--SSCCTT----CTTSCC-CCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCH
T ss_pred             cCceeecCCHHHHHhcCCC--CccCcc----Cccccc-CCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCcccccCccH
Confidence            3448999999999999987  455421    111110 1248999999999998631 25899999986532100   01


Q ss_pred             CcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeee
Q 005894          421 LGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVI  499 (671)
Q Consensus       421 ~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~  499 (671)
                      ..++++++++++++++.    ++++|+||+++.|++++++ |++++++++... .        .+..++..++.....++
T Consensus       152 ~~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~-~--------~~~~~~~~~~~~~~~i~  218 (272)
T 3ch0_A          152 ALFCDLVVAEIKKAHIT----DRFTLQSFDVRALEYMHSQYPDIKLSYLVETK-G--------TLKKQLEKLSFTPAVYS  218 (272)
T ss_dssp             HHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSEEEEEECSS-C--------CHHHHHTTSSSCCSEEE
T ss_pred             HHHHHHHHHHHHHcCCC----CcEEEEeCCHHHHHHHHHHCCCCcEEEEecCC-C--------CHHHHHHHcCCCCcEEc
Confidence            14789999999999987    7999999999999999998 999999998643 1        12234444544224555


Q ss_pred             cCCCcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHH
Q 005894          500 STTESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATAS  568 (671)
Q Consensus       500 ~~~~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~  568 (671)
                      +..   ...++++|+.+|++|+.|++||+|++.             ++.+++ ++||||||||+|+.+.
T Consensus       219 ~~~---~~~~~~~v~~~~~~Gl~v~~wTvn~~~-------------~~~~l~-~~GvdgIiTD~P~~~~  270 (272)
T 3ch0_A          219 PDV---TLVSKKDIDAAHKLGMRVIPWTVNTKE-------------EIETLI-SLGVDGIITDYPDLFF  270 (272)
T ss_dssp             EBG---GGCCHHHHHHHHHTTCEECCBCCCSHH-------------HHHHHH-HHTCSEEEESCGGGGT
T ss_pred             cch---hhcCHHHHHHHHHcCCEEEEeccCCHH-------------HHHHHH-HcCCCEEEeCCHHHHh
Confidence            543   344689999999999999999999987             888884 9999999999999864

>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0

Probab=100.00  E-value=5.8e-45  Score=370.83  Aligned_cols=230  Identities=15%  Similarity=0.180  Sum_probs=190.7

Q ss_pred             CceEEeccCC--CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccc
Q 005894          269 RPLIITHNGA--SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERG  346 (671)
Q Consensus       269 ~p~iIAHRG~--s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G  346 (671)
                      +|+||||||+  ++.+||||++||++|++.|||+||||||+||||++||+||.+|+|  +                    
T Consensus         4 ~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~--~--------------------   61 (238)
T 3no3_A            4 NTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG--K--------------------   61 (238)
T ss_dssp             CCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETT--E--------------------
T ss_pred             CCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCC--C--------------------
Confidence            6899999999  689999999999999999999999999999999999999999965  2                    


Q ss_pred             cccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHH
Q 005894          347 IFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDA  426 (671)
Q Consensus       347 ~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~  426 (671)
                       .|.++||+||++|+.+                   ++++||||+|+|+++++.+.+.++||||......  .+..++++
T Consensus        62 -~v~~~t~~el~~l~~~-------------------~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~--~~~~~~~~  119 (238)
T 3no3_A           62 -HIQSCTYDELKDLQLS-------------------NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPE--RNRDAARL  119 (238)
T ss_dssp             -EGGGSCHHHHTTCBCT-------------------TSCBCCBHHHHHHHHHHCTTCEEEEEECCCSSHH--HHHHHHHH
T ss_pred             -ChHhCCHHHHhhCCCC-------------------CCCcCCcHHHHHHHHhhcCCceEEEEeCCCCCcc--hhHHHHHH
Confidence             7999999999999875                   3579999999999998753368999999764311  12257889


Q ss_pred             HHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcc
Q 005894          427 VTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESF  505 (671)
Q Consensus       427 v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~  505 (671)
                      ++++++++++.    ++++++||+++.|++++++ |+++++++....    ..   .    .+...+.  ..+.+.. ..
T Consensus       120 v~~~l~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~----~~---~----~~~~~~~--~~~~~~~-~~  181 (238)
T 3no3_A          120 SVQMVKRMKLA----KRTDYISFNMDACKEFIRLCPKSEVSYLNGEL----SP---M----ELKELGF--TGLDYHY-KV  181 (238)
T ss_dssp             HHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEECSSCS----CH---H----HHHHTTC--CEEEEEH-HH
T ss_pred             HHHHHHHcCCc----CCEEEEECCHHHHHHHHHHCCCCeEEEEeCCC----CH---H----HHHHCCC--ceEeccH-Hh
Confidence            99999999987    7999999999999999999 999999986432    11   1    1223333  2233321 11


Q ss_pred             cccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhc
Q 005894          506 TTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSK  574 (671)
Q Consensus       506 ~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~  574 (671)
                      ...++++|+++|++|+.|++||+|++.             ++++++ ++||||||||+|+.+.++++++
T Consensus       182 ~~~~~~~v~~~~~~G~~v~~WTVn~~~-------------~~~~l~-~~GVdgIiTD~P~~~~~~l~~r  236 (238)
T 3no3_A          182 LQSHPDWVKDCKVLGMTSNVWTVDDPK-------------LMEEMI-DMGVDFITTDLPEETQKILHSR  236 (238)
T ss_dssp             HHHSTTHHHHHHHTTCEEEEECCCSHH-------------HHHHHH-HHTCSEEEESCHHHHHHHHHHH
T ss_pred             hhCCHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-HcCCCEEECCCHHHHHHHHHhc
Confidence            223568999999999999999999997             899885 9999999999999999998765

>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}

Probab=100.00  E-value=6.4e-44  Score=373.02  Aligned_cols=244  Identities=17%  Similarity=0.271  Sum_probs=195.3

Q ss_pred             CceEEeccCCCC-CCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894          269 RPLIITHNGASG-VYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI  347 (671)
Q Consensus       269 ~p~iIAHRG~s~-~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~  347 (671)
                      +|+||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|+                 ++| 
T Consensus        31 ~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~-----------------~~g-   92 (292)
T 3mz2_A           31 IPLISGHRGGRGKGYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTLERTSN-----------------GTG-   92 (292)
T ss_dssp             CCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSSSSTTTBS-----------------CCS-
T ss_pred             CCEEEECCCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCchhcccCC-----------------CCC-
Confidence            789999999986 7999999999999999999999999999999999999999999999                 778 


Q ss_pred             ccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHH
Q 005894          348 FSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAV  427 (671)
Q Consensus       348 ~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v  427 (671)
                      .|.++||+||++|+++.  +++          .+ .+++||||+|+|++++++  +.++||+|...          .+.|
T Consensus        93 ~v~~~t~~el~~l~~~~--~~~----------~~-~~~~iptL~evl~~~~~~--~~l~iE~K~~~----------~~~v  147 (292)
T 3mz2_A           93 KVSDYTWEELQNFRLKD--PEG----------NI-TNYRIPTLEEAIRWARGK--TILILDKKDVP----------MERT  147 (292)
T ss_dssp             CGGGSCHHHHTTSCBBC--TTC----------CB-CSCCCCBHHHHHHHHTTT--CCEEECCSSSC----------HHHH
T ss_pred             chhhCcHHHHhcCCCCC--CCC----------cc-CCcCCCCHHHHHHHhCCC--cEEEEEECCCc----------HHHH
Confidence            89999999999999872  222          12 357999999999999875  57999998642          3788


Q ss_pred             HHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCc----eeeecCC
Q 005894          428 TKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTR----TSVISTT  502 (671)
Q Consensus       428 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~----~~v~~~~  502 (671)
                      +++++++++.    ++++++||+.+.|+++++. |++++++++..      ...+   ..+. ..+.+.    ..+.+. 
T Consensus       148 ~~~l~~~~~~----~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~------~~~l---~~~~-~~g~~~~~~~~~~~~~-  212 (292)
T 3mz2_A          148 AQLITDMQAE----PYVMITVHDGASARFFYEKNPNFMFEAFVKT------KEAV---QDYE-DNGIPWSHIMAYVGPK-  212 (292)
T ss_dssp             HHHHHHTTCT----TTEEEEESSHHHHHHHHHHCTTCCEEEECCS------HHHH---HHHH-HTTCCGGGEEEEEESS-
T ss_pred             HHHHHHcCCC----CCEEEEECCHHHHHHHHHHCCCCeEEEEeCC------HHHH---HHHH-HhCCChhheeeeeccc-
Confidence            9999999988    7999999999999999999 99999998742      2223   2222 222221    223332 


Q ss_pred             CcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHhcCC
Q 005894          503 ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRSKCS  576 (671)
Q Consensus       503 ~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~~~~  576 (671)
                        +...++++|+.+|++|+.|++||+|+.+...  . ..|+..+|.+++ ++||||||||+|+.+.+++++...
T Consensus       213 --~~~~~~~~V~~ah~~G~~V~vWTv~t~d~~~--~-~~~~~~~~~~L~-~~GVDgIiTD~P~~l~~~L~~~~~  280 (292)
T 3mz2_A          213 --ITPEVREVIDMLHERGVMCMISTAPSDDKLS--T-PESRAEAYRMII-RQGVDIIESDRPIEVAEAISSLIP  280 (292)
T ss_dssp             --CCHHHHHHHHHHHHTTBCEEEECTTTGGGSS--S-HHHHHHHHHHHH-HTTCCEEEESCHHHHHHHHGGGSC
T ss_pred             --ccccCHHHHHHHHHCCCEEEEEeCCCcchhh--h-ccccHHHHHHHH-HcCCCEEEeCCHHHHHHHHHHhcc
Confidence              2345678999999999999999998864100  0 012234788885 999999999999999999986543

>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}

Probab=100.00  E-value=8.2e-44  Score=368.76  Aligned_cols=252  Identities=19%  Similarity=0.233  Sum_probs=203.7

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 ++| .
T Consensus        17 ~~~iiaHRG~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~-----------------~~g-~   78 (278)
T 3i10_A           17 KVLVVAHRGNWRSAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTT-----------------GKG-E   78 (278)
T ss_dssp             SCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBS-----------------CCS-B
T ss_pred             CCEEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCC-----------------CCc-e
Confidence            7899999999999999999999999999999999999999999999999999999999                 778 8


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++|+++  .+++.          + .+++||||+|+|++++++    +.++||..        ..++++|+
T Consensus        79 v~~~t~~el~~l~~~--~~~~~----------~-~~~~iptL~evl~~~~~~----~~~nie~~--------~~~~~~v~  133 (278)
T 3i10_A           79 IKNWTLADIKKLKLK--DKDGK----------V-TNYVVPTLEEALLTAKGK----IMVNLDKA--------YDIFDDVY  133 (278)
T ss_dssp             GGGSCHHHHTTSCBB--CTTSC----------B-CSCCCCBHHHHHHHHTTT----SEEEEESC--------GGGHHHHH
T ss_pred             eecCcHHHHhcCCCC--CCCcc----------c-CCCCCCCHHHHHHHhcCC----eEEEEecC--------chHHHHHH
Confidence            999999999999987  34431          1 368999999999999874    44444432        14789999


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCC-ceeeecCCCccc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVT-RTSVISTTESFT  506 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~-~~~v~~~~~~~~  506 (671)
                      ++++++++.    ++|+++|  ...++.+++. |++++++++...+....+...+.+.+|+..+.+. ...+++..   .
T Consensus       134 ~~l~~~~~~----~~v~i~s--~~~l~~~~~~~p~~~~~~l~~p~i~~~~~~~~~~i~~~~~~~~p~~~~~~~~~~---~  204 (278)
T 3i10_A          134 AILEKTETQ----NQVIMKG--GQPIETVKREFGSYLDKVLYMPVIDLGNKEAEKIITDYLKELRPAAFEIIYSDP---K  204 (278)
T ss_dssp             HHHHHHTCG----GGEEEEE--SSCHHHHHHHHGGGTTTSEEEEEEETTSTTHHHHHHHHHHHTCCSEEEEEBCCT---T
T ss_pred             HHHHHcCCC----CeEEEEE--hHHHHHHHHHCcCCccceEEEeeecccccchHHHHHHHHHhcCceEEEEeecCC---c
Confidence            999999998    7999999  3468888888 8887766665443333344566788888877765 23334332   3


Q ss_pred             ccchHHHHHHHHcCCeEEEEeccCcccccccccCC-----ChHHHHHHHHhhc-CccEEEECChhhHHHHHHhcCC
Q 005894          507 TNATNILRDLHSANISVYISALRNEYLSIAFDYLA-----DPLIEVATFAQGV-GVDGITTEFPATASKYFRSKCS  576 (671)
Q Consensus       507 ~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~-----D~~~e~~~~l~~~-GVDgIiTD~P~~~~~~~~~~~~  576 (671)
                      ...+++++.+|++|++|++||+.++   ++.+|.+     ||..+|.+++ ++ |||+|+||+|+.+.+|++++..
T Consensus       205 ~~~~~~v~~~~~~g~~v~~nTlw~~---~~~g~~d~~a~~d~~~~~~~l~-~~~Gvd~I~TD~P~~l~~yL~~~~~  276 (278)
T 3i10_A          205 NPLPPKIKQLLFKKSLIWYNTLWGS---LAGNHDDNLALTDPEKSYGYLI-EQLGARILQTDQPAYLLDYLRKKGW  276 (278)
T ss_dssp             CSSHHHHHHHHTTTSEEEEECSSGG---GBTTCCHHHHHHCHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHTS
T ss_pred             cchHHHHHHHHHCCCEEEEEecccc---cccCccchhhccChHHHHHHHH-hcCCCCEEEeCCHHHHHHHHhhccc
Confidence            3347899999999999999998655   2455543     7777899985 88 9999999999999999987643

>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3

Probab=100.00  E-value=8.4e-44  Score=361.36  Aligned_cols=218  Identities=21%  Similarity=0.237  Sum_probs=179.2

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      ...||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 ++| .
T Consensus        12 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~-----------------~~g-~   73 (234)
T 1o1z_A           12 HVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFG-----------------LDV-K   73 (234)
T ss_dssp             CCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHC-----------------EEE-E
T ss_pred             eEEEEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCC-----------------cCc-C
Confidence            5689999999999999999999999999999999999999999999999999999999                 778 8


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++|+ +                     ++||||+|+|++++++  ++++||||.+         .++++++
T Consensus        74 v~d~T~~eL~~l~-~---------------------~~iptL~evL~~~~~~--~~l~iEiK~~---------~~~~~v~  120 (234)
T 1o1z_A           74 IRDATVSELKELT-D---------------------GKITTLKEVFENVSDD--KIINIEIKER---------EAADAVL  120 (234)
T ss_dssp             GGGSCHHHHHHHT-T---------------------TCCCBHHHHHHHSCTT--SEEEEEECCG---------GGHHHHH
T ss_pred             cccCcHHHHhcCC-C---------------------CCCCCHHHHHHhcccC--CeEEEEeCCc---------cHHHHHH
Confidence            9999999999997 2                     5799999999999885  6899999964         3568889


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcC-CceeeecCCCccc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTV-TRTSVISTTESFT  506 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~-~~~~v~~~~~~~~  506 (671)
                      +++++   .    ++++++||+   |+++++. |++++++++.....  .  .+   ..++..++. ....+.+... ++
T Consensus       121 ~~l~~---~----~~vii~Sf~---l~~~~~~~p~~~~~~l~~~~~~--~--~~---~~~~~~~~~~~~~~i~~~~~-~~  182 (234)
T 1o1z_A          121 EISKK---R----KNLIFSSFD---LDLLDEKFKGTKYGYLIDEENY--G--SI---ENFVERVEKERPYSLHVPYQ-AF  182 (234)
T ss_dssp             HHHTT---C----CSEEEEESC---HHHHHHHCTTSCEEEECCTTTT--C--SH---HHHHHHHHHHCCSEEEEEGG-GG
T ss_pred             HHHhc---c----CCEEEEchh---HHHHHhhCCCCcEEEEeccccc--c--CH---HHHHHHcCCCCCCEEEeCHH-Hh
Confidence            99887   3    699999999   8999988 99999999865211  0  11   112222221 0123444321 11


Q ss_pred             ccc--hHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHH
Q 005894          507 TNA--TNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY  570 (671)
Q Consensus       507 ~~~--~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~  570 (671)
                      ..+  +++++.+|++|+.|++||+|++.             ++.+++ ++ |||||||+|+.+.+|
T Consensus       183 g~~~~~~~v~~~~~~G~~v~~wTvn~~~-------------~~~~l~-~~-vdgIiTD~P~~~~~~  233 (234)
T 1o1z_A          183 ELEYAVEVLRSFRKKGIVIFVWTLNDPE-------------IYRKIR-RE-IDGVITDEVELFVKL  233 (234)
T ss_dssp             GSHHHHHHHHHHHHTTCEEEEESCCCHH-------------HHHHHG-GG-CSEEEESCHHHHHHT
T ss_pred             cCCccHHHHHHHHHcCCEEEEeCCCCHH-------------HHHHHH-Hh-CCEEEcCCHHHHhhc
Confidence            114  78999999999999999999987             898885 89 999999999998876

>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A

Probab=100.00  E-value=2.5e-43  Score=355.70  Aligned_cols=215  Identities=16%  Similarity=0.225  Sum_probs=178.8

Q ss_pred             CCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894          268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI  347 (671)
Q Consensus       268 ~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~  347 (671)
                      .+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+  +                    | 
T Consensus         6 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~--~--------------------g-   62 (224)
T 1vd6_A            6 QRPLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP--L--------------------G-   62 (224)
T ss_dssp             -CCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET--T--------------------E-
T ss_pred             CCceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC--C--------------------C-
Confidence            3689999999999999999999999999999999999999999999999999986  2                    3 


Q ss_pred             ccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHh-ccCcccEEEEecCchhhhhhcCCcHHHH
Q 005894          348 FSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAK-TKAVSGVLININNAAYLASKKGLGVVDA  426 (671)
Q Consensus       348 ~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~-~~~~~~i~IeIK~~~~~~~~~~~~~~~~  426 (671)
                      .|.++||+||++|+                       ++||||+|+|++++ +. .+.++||||......    ..++++
T Consensus        63 ~v~~~t~~eL~~l~-----------------------~~iptL~evl~~~~~~~-~~~l~iEiK~~~~~~----~~~~~~  114 (224)
T 1vd6_A           63 PVFQVDYADLKAQE-----------------------PDLPRLEEVLALKEAFP-QAVFNVELKSFPGLG----EEAARR  114 (224)
T ss_dssp             EGGGSCHHHHHHHS-----------------------TTCCBHHHHHGGGGTCT-TCEEEEEECCCTTSH----HHHHHH
T ss_pred             ChhhCCHHHHHhcC-----------------------CCCCCHHHHHHhhhccC-CceEEEEECCCCCcc----HHHHHH
Confidence            69999999999986                       36999999999998 33 258999999764321    136788


Q ss_pred             HHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcc
Q 005894          427 VTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESF  505 (671)
Q Consensus       427 v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~  505 (671)
                      +++++++   .    ++++++||+++.|+.+++. |++++++++....           ..++...++  ..+++..   
T Consensus       115 v~~~l~~---~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-----------~~~~~~~~~--~~i~~~~---  171 (224)
T 1vd6_A          115 LAALLRG---R----EGVWVSSFDPLALLALRKAAPGLPLGFLMAEDH-----------SALLPCLGV--EAVHPHH---  171 (224)
T ss_dssp             HHHHTTT---C----SSEEEEESCHHHHHHHHHHCTTSCEEEEESSCC-----------GGGGGGSCC--SEEEEBG---
T ss_pred             HHHHHhc---C----CcEEEEeCCHHHHHHHHHHCCCCCEEEEecccc-----------HHHHHHcCC--cEEecCc---
Confidence            8888877   3    6999999999999999998 9999999985431           122333333  3455543   


Q ss_pred             cccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHH
Q 005894          506 TTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY  570 (671)
Q Consensus       506 ~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~  570 (671)
                      ...++++|+.+|++|+.|++||+|++.             ++.+++ ++||||||||+|..+.++
T Consensus       172 ~~~~~~~v~~~~~~G~~v~~wtvn~~~-------------~~~~l~-~~GvdgI~TD~p~~~~~~  222 (224)
T 1vd6_A          172 ALVTEEAVAGWRKRGLFVVAWTVNEEG-------------EARRLL-ALGLDGLIGDRPEVLLPL  222 (224)
T ss_dssp             GGCCHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HTTCSEEEESCHHHHTTS
T ss_pred             ccCCHHHHHHHHHCCCEEEEEeCCCHH-------------HHHHHH-hcCCCEEEcCCHHHHHHh
Confidence            344689999999999999999999987             898884 999999999999988654

>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*

Probab=100.00  E-value=1e-34  Score=303.22  Aligned_cols=232  Identities=12%  Similarity=0.109  Sum_probs=168.5

Q ss_pred             Cc-eEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCC---cccccCcccccccccccccccccc
Q 005894          269 RP-LIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPD---LIGKTTAATVFMSKATSVPEIQKE  344 (671)
Q Consensus       269 ~p-~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~---L~rtT~~~~~f~~r~~~~~~~~~~  344 (671)
                      +| +|||||       |||++||++|++.|||+||+|||+ |||++||+||.+   |+|+|+                 +
T Consensus         5 ~p~~iiaHr-------ENTl~Af~~A~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~-----------------~   59 (285)
T 1xx1_A            5 RPIWNLAHM-------VNAVAQIPDFLDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCI-----------------R   59 (285)
T ss_dssp             EEEEEEESC-------CCSTTHHHHHHHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSC-----------------C
T ss_pred             CCcEEEEeh-------hccHHHHHHHHHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccC-----------------C
Confidence            56 899999       999999999999999999999999 999999999999   999999                 7


Q ss_pred             cccccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhh---cCC
Q 005894          345 RGIFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASK---KGL  421 (671)
Q Consensus       345 ~G~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~---~~~  421 (671)
                      +| .|.++ |+||++|+..    ++         +.+         ++.|        .+++||||........   .+.
T Consensus        60 ~g-~v~d~-l~eL~~l~~~----~~---------~~~---------~~~L--------~~l~iEiK~~~~~~~~~~~~~~  107 (285)
T 1xx1_A           60 WE-YFNVF-LKTLREYTTP----GN---------AKY---------RDGF--------ILFVLDLKTGSLSNDQVRPAGE  107 (285)
T ss_dssp             EE-EHHHH-HHHHHHHTST----TC---------TTC---------CTTC--------CEEEEEECCTTCCHHHHHHHHH
T ss_pred             Cc-cHHHH-HHHHHHcccC----CC---------Ccc---------cccc--------cEEEEecCCCcccccccchhhh
Confidence            78 79999 9999999872    21         122         2212        1599999976432110   000


Q ss_pred             cHHHHHHHHHHhcCCCCCCCce----EEEEcCChHHHHH-HhcC--------CCceEEEEeecccCCCChhHHHHHHHHH
Q 005894          422 GVVDAVTKALSNATFDKQSTQQ----VMIQSDDSSVLSK-FQDV--------PAYKKVLHIRKEVSAAPREVVEEIKKYA  488 (671)
Q Consensus       422 ~~~~~v~~~l~~~~~~~~~~~~----vii~Sfd~~~L~~-lk~~--------p~~~~~~l~~~~~~d~~~~~l~~i~~~a  488 (671)
                      .+++   .++++++.......+    |+|+||++..|.+ +++.        |.+++++++..... .+...+..+..++
T Consensus       108 ~~~~---~ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p~~~~~~l~~~~~~-~~~~~~~~~~~~~  183 (285)
T 1xx1_A          108 NVAK---ELLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYL-PSLPTLDATHEAY  183 (285)
T ss_dssp             HHHH---HHHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGGGGGEEEEECCCCS-SSCCCHHHHHHHH
T ss_pred             hHHH---HHHHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccCcccceEEecccccc-cchhhHHHHHHHH
Confidence            0222   266777653111135    9999999999999 8874        88999998754310 0111234455666


Q ss_pred             HHhcCCceeeecCC--------CcccccchHHHHHHHHcCC--eEEEEeccCcccccccccCCChHHHHHHHHhhcCccE
Q 005894          489 SAVTVTRTSVISTT--------ESFTTNATNILRDLHSANI--SVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDG  558 (671)
Q Consensus       489 ~~v~~~~~~v~~~~--------~~~~~~~~~~V~~~~~~Gl--~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDg  558 (671)
                      ..+++.. .++...        ..+...++.+++++|++|+  +|++||+|++.             ++++++ ++||||
T Consensus       184 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~~-------------~~~~l~-~~GVDg  248 (285)
T 1xx1_A          184 KKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKVS-------------TTKAAL-DVGVDG  248 (285)
T ss_dssp             HHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSHH-------------HHHHHH-HHTCSE
T ss_pred             HHhCCCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCHH-------------HHHHHH-hcCCCE
Confidence            6666533 221100        0012345678999999999  99999999998             899985 999999


Q ss_pred             EEECChhhHHHHHHhcCC
Q 005894          559 ITTEFPATASKYFRSKCS  576 (671)
Q Consensus       559 IiTD~P~~~~~~~~~~~~  576 (671)
                      ||||+|+.+.+++++...
T Consensus       249 IiTD~P~~~~~~l~~~~~  266 (285)
T 1xx1_A          249 IMTNYPNVLIGVLKESGY  266 (285)
T ss_dssp             EEESCHHHHHHHHHSTTT
T ss_pred             EEeCCHHHHHHHHhhhcc
Confidence            999999999999986543

>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A

Probab=99.97  E-value=4.5e-31  Score=284.14  Aligned_cols=248  Identities=20%  Similarity=0.267  Sum_probs=179.2

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC--
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR--   81 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r--   81 (671)
                      +...+..+||||||+||||++||+||.+|+||||+...||+|+++   +|   +|+ |.|+|++||++++++ .||+.  
T Consensus        54 A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~f~~~~~~---~g---~~~-v~d~T~~eL~~l~~~-~~~~~~~  125 (356)
T 1ydy_A           54 AYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK---DG---RYY-AIDFTLDEIKSLKFT-EGFDIEN  125 (356)
T ss_dssp             HHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT---TS---CCB-GGGSCHHHHHHSCBC-SCEEEET
T ss_pred             HHHcCCCEEEeeeEECCCCcEEEeCCChHHhhcCccccccccccc---CC---Ccc-hhhCcHHHHHhCCCC-ccccccc
Confidence            345677799999999999999999999999999999999998863   33   355 999999999999998 45431  


Q ss_pred             -------CccCC---CCCCCCChhhhhHHHHH-------h------cC---------ccHHHHHHHHHHHcCC----ceE
Q 005894           82 -------SEAFD---NTQPIPTPDTIYDLFYS-------Q------HN---------ISAAKYITEYLQKLIS----NVY  125 (671)
Q Consensus        82 -------~~~f~---~~~~IptL~ev~~~~~~-------~------~~---------~~~~~~v~~~l~~~~~----~~~  125 (671)
                             +.+|.   .+++||||+|+++.+..       .      .+         ..+++.+++++++++.    +++
T Consensus       126 g~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~v  205 (356)
T 1ydy_A          126 GKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKV  205 (356)
T ss_dssp             TEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHHHTTCCHHHHHHHHHHHTTCCSTTSSB
T ss_pred             cccccccccccccccCCCcCCCHHHHHHHHHHhhhcccCCceEEEeecCcccccccchhHHHHHHHHHHHcCCCCCCCCE
Confidence                   23342   47899999999765532       1      12         2478899999999983    689


Q ss_pred             EEeCCChHHHHHhhhhc----CCCCcceEEEecCCCCcC--------CCCCCCHHHHh--hcHHHHHHhhceecCCCcce
Q 005894          126 YISSPEIGFLKTMDRKV----DHNTTKLVFMVLEPNAVE--------PTTNQTYGSIL--KNLTAIKSFASGIVVPKSYI  191 (671)
Q Consensus       126 ~isSf~~~~L~~i~~~~----~~~~~~~v~~~~~~~~~~--------~~~~~~y~~~~--~~l~~i~~~a~~i~~~~~~i  191 (671)
                      +|+||++..|+++++..    .| ..++++++.......        +..+..|..+.  ..+..+..+++++++.+..+
T Consensus       206 ~i~SF~~~~l~~~~~~~~p~~~p-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~p~~~~~  284 (356)
T 1ydy_A          206 YLQCFDADELKRIKNELEPKMGM-ELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHML  284 (356)
T ss_dssp             EEEESCHHHHHHHHHTHHHHHTC-CCEEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHHHHTTTCSEEEEBGGGT
T ss_pred             EEEcCCHHHHHHHHhhcccccCC-CceEEEEeccCcccccccccccccccccchhhhcchhhHHHHHhhCeEEccCHHHh
Confidence            99999999999999642    45 478887543211000        00111333332  24666777889999887766


Q ss_pred             eecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHH-HhhcCceeeeeEeecCCCccccc
Q 005894          192 IPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLT-FIDNSQFAVDGFITDFPTTATEA  266 (671)
Q Consensus       192 ~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~-~i~~g~~~Vdgv~td~p~~~~~~  266 (671)
                      .+... ++.....+++|+.||++|++|++||||++.. + .|..||...+++ +++.|   ||||+||+|.....+
T Consensus       285 ~~~~~-~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~l-~-~~~~d~~~~~~~~l~~~G---VDgIiTD~P~~~~~~  354 (356)
T 1ydy_A          285 IEETS-QPGNIKLTGMVQDAQQNKLVVHPYTVRSDKL-P-EYTPDVNQLYDALYNKAG---VNGLFTDFPDKAVKF  354 (356)
T ss_dssp             BCTTC-BTTBCCBCSHHHHHHHTTCEECCBCBCTTSC-C-TTCSSHHHHHHHHHTTSC---CSEEEESCHHHHHHH
T ss_pred             ccccc-cccccCCHHHHHHHHHCCCEEEEEEECcccc-c-ccccCHHHHHHHHHHHcC---CCEEEeCCHHHHHHh
Confidence            43211 1111234689999999999999999999843 3 245677666575 56888   999999999876543

>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}

Probab=99.97  E-value=5.7e-31  Score=270.00  Aligned_cols=197  Identities=20%  Similarity=0.191  Sum_probs=155.5

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA   84 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~   84 (671)
                      ...+..+||||||+||||++||+||.+|+||||+                  +|. |.|+|++||++++++ +||+  +.
T Consensus        36 ~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~------------------~g~-v~~~t~~eL~~l~~~-~~~~--~~   93 (252)
T 2pz0_A           36 MELGADGIELDVQLTKDGHLVVIHDETVDRTTNG------------------EGF-VKDFTLEEIKKLDAG-IKFG--EK   93 (252)
T ss_dssp             HHHTCSEEEEEEEECTTCCEEECSSSBSTTTSSC------------------CSB-GGGSCHHHHTTSCSS-TTTC--GG
T ss_pred             HHcCCCEEEEEEEEecCCeEEEEcCCcccccCCC------------------Ccc-hhhCcHHHHhhcCCC-CCCC--CC
Confidence            3456779999999999999999999999999999                  888 999999999999998 5665  56


Q ss_pred             CCCCCCCCChhhhhHHHHH-h------cC------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceE
Q 005894           85 FDNTQPIPTPDTIYDLFYS-Q------HN------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLV  150 (671)
Q Consensus        85 f~~~~~IptL~ev~~~~~~-~------~~------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v  150 (671)
                      |. +++||||+|+++.+.. .      .+      ..+++.+++++++++ .++++|+||++..|+.+++ ..| ..++.
T Consensus        94 ~~-~~~iPtL~evL~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~-~~p-~~~~~  170 (252)
T 2pz0_A           94 FA-GERIPTLYEVFELIGDKDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKK-MAP-HLKIG  170 (252)
T ss_dssp             GT-TCCCCBHHHHHHHHTTSCCEEEEEECCSSCCCTTHHHHHHHHHHHTTCTTTEEEEESBHHHHHHHHH-HCT-TSEEE
T ss_pred             CC-CCcCCCHHHHHHHhhhcCCeEEEEeCCCCcccHHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHH-HCC-CCCEE
Confidence            66 8999999999776532 1      12      247899999999998 5789999999999999995 556 47887


Q ss_pred             EEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCccc
Q 005894          151 FMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYS  229 (671)
Q Consensus       151 ~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~  229 (671)
                      +.+....       ..+      ...++. .++++.+....+            ..++|+.+|++|++|++||||++.. 
T Consensus       171 ~l~~~~~-------~~~------~~~~~~~~~~~i~~~~~~~------------~~~~v~~~~~~G~~v~~wTvn~~~~-  224 (252)
T 2pz0_A          171 LLYQCGL-------VEP------WHMALRMEAYSLHPFYFNI------------IPELVEGCKKNGVKLFPWTVDRKED-  224 (252)
T ss_dssp             EEECSBC-------SST------HHHHHHTTCSEEEEBGGGC------------CHHHHHHHHHTTCEECCBCCCSHHH-
T ss_pred             EEecCcc-------ccH------HHHHHHcCCeEEecchhcC------------CHHHHHHHHHCCCEEEEECCCCHHH-
Confidence            6543210       011      112222 256666554443            2589999999999999999998754 


Q ss_pred             CCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894          230 SYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA  266 (671)
Q Consensus       230 ~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~  266 (671)
                                 ++++++.|   ||||+||+|.....+
T Consensus       225 -----------~~~l~~~G---vdgIiTD~P~~~~~~  247 (252)
T 2pz0_A          225 -----------MERMIKAG---VDGIITDDPETLINL  247 (252)
T ss_dssp             -----------HHHHHHHT---CSEEEESCHHHHHHH
T ss_pred             -----------HHHHHHcC---CCEEEcCCHHHHHHH
Confidence                       88999999   999999999987653

>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}

Probab=99.96  E-value=6.6e-30  Score=261.31  Aligned_cols=199  Identities=16%  Similarity=0.142  Sum_probs=155.2

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+||||+                  +|. |.|+|++||++++++ +||+  +
T Consensus        30 A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~~------------------~g~-v~~~t~~eL~~l~~g-~~~~--~   87 (247)
T 2otd_A           30 GAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNG------------------WGV-AGELNWQDLLRVDAG-SWYS--K   87 (247)
T ss_dssp             HHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSSC------------------CSB-GGGSCHHHHTTCCSS-TTTC--G
T ss_pred             HHHcCCCEEEEEeeEccCCcEEEECCCCccccCCC------------------Ccc-HhhCcHHHHhhCCCC-CccC--C
Confidence            34567779999999999999999999999999999                  888 999999999999998 6665  4


Q ss_pred             cCCCCCCCCChhhhhHHHHH-hc------Cc------cHHHHHHHHHHHc--CCceEEEeCCChHHHHHhhhhcCCCCcc
Q 005894           84 AFDNTQPIPTPDTIYDLFYS-QH------NI------SAAKYITEYLQKL--ISNVYYISSPEIGFLKTMDRKVDHNTTK  148 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~-~~------~~------~~~~~v~~~l~~~--~~~~~~isSf~~~~L~~i~~~~~~~~~~  148 (671)
                      .|. +++||||+|+++.+.. ..      +.      .+++.++++++++  +..+++|+||++..|+.+++ ..| ..+
T Consensus        88 ~~~-~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~~v~i~Sf~~~~l~~~~~-~~p-~~~  164 (247)
T 2otd_A           88 AFK-GEPLPLLSQVAERCREHGMMANIEIKPTTGTGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQQ-AAP-ELP  164 (247)
T ss_dssp             GGT-TCCCCBHHHHHHHHHHTTCEEEEEECCCTTCHHHHHHHHHHHHHHHTTTSCCCEEEESCHHHHHHHHH-HCT-TSC
T ss_pred             CCC-CCcCCCHHHHHHHHHhcCCEEEEEECCCCCcchHHHHHHHHHHHHHhcCcCCEEEEcCCHHHHHHHHH-HCC-CCC
Confidence            566 8999999999776542 11      21      2567899999887  34489999999999999995 556 488


Q ss_pred             eEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCc
Q 005894          149 LVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDI  227 (671)
Q Consensus       149 ~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~  227 (671)
                      +.+.+...       ...+.      ..++.. ++++.+....+            ..++|+.+|++|++|++||||++.
T Consensus       165 ~~~l~~~~-------~~~~~------~~~~~~~~~~i~~~~~~~------------~~~~v~~~~~~G~~v~~wTvn~~~  219 (247)
T 2otd_A          165 RGLLLDEW-------RDDWR------ELTARLGCVSIHLNHKLL------------DKARVMQLKDAGLRILVYTVNKPQ  219 (247)
T ss_dssp             EEEEESSC-------CTTHH------HHHHHHTCSEEEEEGGGC------------CHHHHHHHHHTTCEEEEECCCCHH
T ss_pred             EEEEecCC-------cccHH------HHHHHcCCeEEecChHhC------------CHHHHHHHHHCCCEEEEEccCCHH
Confidence            87654321       11121      122222 56666654443            258999999999999999999874


Q ss_pred             ccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          228 YSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       228 ~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      .            ++++++.|   ||||+||+|.....++
T Consensus       220 ~------------~~~l~~~G---vdgI~TD~p~~~~~~l  244 (247)
T 2otd_A          220 H------------AAELLRWG---VDCICTDAIDVIGPNF  244 (247)
T ss_dssp             H------------HHHHHHHT---CSEEEESCTTTSCTTC
T ss_pred             H------------HHHHHHcC---CCEEEeCCHHHHHHHH
Confidence            4            88999999   9999999999877654

>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}

Probab=99.96  E-value=8.3e-30  Score=261.33  Aligned_cols=199  Identities=18%  Similarity=0.178  Sum_probs=154.3

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+||||+                  +|. |.|+|++||++++++ +|++  +
T Consensus        33 A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~------------------~~~-v~~~t~~el~~l~~~-~~~~--~   90 (252)
T 3qvq_A           33 AGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTDG------------------DGL-IYKTPLAELKQLDAG-SWKG--Q   90 (252)
T ss_dssp             HHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSSC------------------CSB-GGGSCHHHHTTSCSS-TTTC--G
T ss_pred             HHHcCCCEEEEEEEECCCCcEEEECCCccccccCC------------------Cce-eecCcHHHHhcCCCC-CccC--c
Confidence            34456779999999999999999999999999999                  888 999999999999998 6665  5


Q ss_pred             cCCCCCCCCChhhhhHHHHH-h------cCc------cHHHHHHHHHHHcCC--ceEEEeCCChHHHHHhhhhcCCCCcc
Q 005894           84 AFDNTQPIPTPDTIYDLFYS-Q------HNI------SAAKYITEYLQKLIS--NVYYISSPEIGFLKTMDRKVDHNTTK  148 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~-~------~~~------~~~~~v~~~l~~~~~--~~~~isSf~~~~L~~i~~~~~~~~~~  148 (671)
                      .|. +++||||+|+++.+.. .      .+.      .+++.+.+++++++.  ++++++||++..|+.+++ ..| ..+
T Consensus        91 ~~~-~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~-~~p-~~~  167 (252)
T 3qvq_A           91 EYQ-QETIPTLLEAIEVISQYGMGLNLELKPCEGLEEETIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKA-LWP-EIA  167 (252)
T ss_dssp             GGT-TCCCCBHHHHHHHHHHTTCEEEEEECCCTTCHHHHHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHH-HCT-TSC
T ss_pred             cCC-CCcCcCHHHHHHHHhccCcEEEEEecCCCCccHHHHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHH-HCC-CCc
Confidence            666 7999999999776532 1      121      256778899998873  589999999999999995 566 488


Q ss_pred             eEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCc
Q 005894          149 LVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDI  227 (671)
Q Consensus       149 ~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~  227 (671)
                      +.+.+...       ...+.      ..++. -+.++.+....+            ..++|+.+|++|++|++||||++.
T Consensus       168 ~~~l~~~~-------~~~~~------~~~~~~~~~~i~~~~~~~------------~~~~v~~~~~~G~~v~~WTvn~~~  222 (252)
T 3qvq_A          168 RGYNVSAI-------PSAWQ------ERLEHLDCAGLHIHQSFF------------DVQQVSDIKAAGYKVLAFTINDES  222 (252)
T ss_dssp             EEEECSSC-------CTTHH------HHHHHHTCSEEEEEGGGC------------CHHHHHHHHHTTCEEEEECCCCHH
T ss_pred             EEEEEecC-------chhHH------HHHHHcCCeEEecchhhC------------CHHHHHHHHHCCCEEEEEcCCCHH
Confidence            88743221       11121      11221 245555544433            258999999999999999999875


Q ss_pred             ccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          228 YSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       228 ~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      .            ++++++.|   ||||+||+|.....++
T Consensus       223 ~------------~~~l~~~G---VdgIiTD~P~~~~~~l  247 (252)
T 3qvq_A          223 L------------ALKLYNQG---LDAVFSDYPQKIQSAI  247 (252)
T ss_dssp             H------------HHHHHHTT---CCEEEESSHHHHHHHH
T ss_pred             H------------HHHHHHcC---CCEEEeCCHHHHHHHH
Confidence            4            88999999   9999999999876543

>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A

Probab=99.96  E-value=5.7e-30  Score=267.57  Aligned_cols=204  Identities=23%  Similarity=0.266  Sum_probs=158.1

Q ss_pred             cCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC----
Q 005894            6 CLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR----   81 (671)
Q Consensus         6 ~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r----   81 (671)
                      ..+..+||||||+||||++||+||.+|+||||+                  +|. |.|+|++||++++++ +||+.    
T Consensus        50 ~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~------------------~g~-v~d~T~~eL~~l~~~-~~f~~~~p~  109 (287)
T 2oog_A           50 ELKASYIEIDLQRTKDGHLVAMHDETVNRTTNG------------------HGK-VEDYTLDELKQLDAG-SWFNKKYPK  109 (287)
T ss_dssp             TSCCSEEEEEEEECTTCCEEECSSSBSTTTSSC------------------CSB-GGGSCHHHHTTSCSS-HHHHHHCGG
T ss_pred             HcCCCEEEEEeeEccCCcEEEECCChhcccCCC------------------Cee-hhhCcHHHHHhcCCC-cccCccCcc
Confidence            467779999999999999999999999999999                  888 999999999999998 56541    


Q ss_pred             --CccCCCCCCCCChhhhhHHHHHhc------C-----ccHHHHHHHHHHHcCC--------ceEEEeCCChHHHHHhhh
Q 005894           82 --SEAFDNTQPIPTPDTIYDLFYSQH------N-----ISAAKYITEYLQKLIS--------NVYYISSPEIGFLKTMDR  140 (671)
Q Consensus        82 --~~~f~~~~~IptL~ev~~~~~~~~------~-----~~~~~~v~~~l~~~~~--------~~~~isSf~~~~L~~i~~  140 (671)
                        ...|. +++||||+|+++.+....      +     ..+++.+++++++++.        ++++|+||++..|+.+++
T Consensus       110 ~~~~~~~-~~~iPtL~evL~~~~~~~~l~IEiK~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~  188 (287)
T 2oog_A          110 YARASYK-NAKVPTLDEILERYGPNANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHR  188 (287)
T ss_dssp             GCCGGGT-TCCCCBHHHHHHHHCTTSCEEEECCCTTTSTTHHHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHH
T ss_pred             ccccccC-CccCCCHHHHHHhhCcCceEEEEECCCCCcchHHHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHH
Confidence              12344 799999999977653221      2     2477899999999873        579999999999999995


Q ss_pred             hcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEE
Q 005894          141 KVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYA  220 (671)
Q Consensus       141 ~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~  220 (671)
                       ..| ..++++.+.... ....   ..    ..+..++.++.++.+....+   +         ..+|+.+|++|++|++
T Consensus       189 -~~p-~~~~~~l~~~~~-~~~~---~~----~~~~~~~~~~~~v~~~~~~~---~---------~~~v~~~~~~G~~v~~  246 (287)
T 2oog_A          189 -QNK-HVPLVKLVDKGE-LQQF---ND----QRLKEIRSYAIGLGPDYTDL---T---------EQNTHHLKDLGFIVHP  246 (287)
T ss_dssp             -HCT-TSCEEEEECTTT-GGGC---CH----HHHHHHHTTCSEEEEBGGGC---C---------HHHHHHHHHTTCEECC
T ss_pred             -hCC-CCcEEEEecCCc-cccc---CH----HHHHHHhhhheEEcccHhhc---C---------HHHHHHHHHCCCeEEE
Confidence             556 488877543221 1100   00    12445666777777655444   2         5899999999999999


Q ss_pred             eeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          221 SGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       221 wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      ||||++..            ++++++.|   ||||+||+|......+
T Consensus       247 wTvn~~~~------------~~~l~~~G---VdgIiTD~P~~~~~~~  278 (287)
T 2oog_A          247 YTVNEKAD------------MLRLNKYG---VDGVFTNFADKYKEVI  278 (287)
T ss_dssp             BCCCSHHH------------HHHHHHHT---CSEEEESCHHHHHHHH
T ss_pred             EeCCCHHH------------HHHHHHcC---CCEEEeCCHHHHHHHH
Confidence            99998754            88999999   9999999998876543

>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}

Probab=99.95  E-value=8.2e-29  Score=256.80  Aligned_cols=208  Identities=16%  Similarity=0.156  Sum_probs=150.0

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccc----cccccccccccccccccCCcccccccccccCHHHHcccccccccc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNN----ITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVY   79 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~Ldr----tT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~   79 (671)
                      +...+..+||||||+||||++||+||.+|+|    +||+..+++.          .-.+++|.|+|++||++++++ +|+
T Consensus        32 A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~~~----------~~~~~~v~d~t~~eL~~l~~~-~~~  100 (272)
T 3ch0_A           32 ALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTEA----------NEKNFNLYAMNYADIKEIDVG-MKT  100 (272)
T ss_dssp             HHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCTT----------TGGGSBGGGSCHHHHTTSCCS-SSC
T ss_pred             HHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCcccccc----------cccCceeecCCHHHHHhcCCC-Ccc
Confidence            3345678999999999999999999999999    5666322221          113445999999999999998 566


Q ss_pred             CCCccCCC----CCCCCChhhhhHHHHH---hc------Cc-------------cHHHHHHHHHHHcC-CceEEEeCCCh
Q 005894           80 TRSEAFDN----TQPIPTPDTIYDLFYS---QH------NI-------------SAAKYITEYLQKLI-SNVYYISSPEI  132 (671)
Q Consensus        80 ~r~~~f~~----~~~IptL~ev~~~~~~---~~------~~-------------~~~~~v~~~l~~~~-~~~~~isSf~~  132 (671)
                      +  +.|++    ..+||||+|+++.+..   ..      +.             .+++.+++++++++ .++++|+||++
T Consensus       101 ~--~~~~~~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~  178 (272)
T 3ch0_A          101 H--PRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNIALFCDLVVAEIKKAHITDRFTLQSFDV  178 (272)
T ss_dssp             C--TTCTTSCCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCHHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred             C--ccCcccccCCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCcccccCccHHHHHHHHHHHHHHcCCCCcEEEEeCCH
Confidence            4  45551    2389999999776543   11      21             15788999999988 57899999999


Q ss_pred             HHHHHhhhhcCCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHH
Q 005894          133 GFLKTMDRKVDHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAH  212 (671)
Q Consensus       133 ~~L~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah  212 (671)
                      ..|+.+++ ..| +.++++.+....        .+...++   .+..+++++++....+            ..++|+.+|
T Consensus       179 ~~l~~~~~-~~p-~~~~~~l~~~~~--------~~~~~~~---~~~~~~~~i~~~~~~~------------~~~~v~~~~  233 (272)
T 3ch0_A          179 RALEYMHS-QYP-DIKLSYLVETKG--------TLKKQLE---KLSFTPAVYSPDVTLV------------SKKDIDAAH  233 (272)
T ss_dssp             HHHHHHHH-HCT-TSEEEEEECSSC--------CHHHHHT---TSSSCCSEEEEBGGGC------------CHHHHHHHH
T ss_pred             HHHHHHHH-HCC-CCcEEEEecCCC--------CHHHHHH---HcCCCCcEEccchhhc------------CHHHHHHHH
Confidence            99999995 556 488887543211        1111111   0111124444433322            368999999


Q ss_pred             HcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccc
Q 005894          213 NAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTAT  264 (671)
Q Consensus       213 ~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~  264 (671)
                      ++|++|++||||++.            +++++++.|   ||||+||+|....
T Consensus       234 ~~Gl~v~~wTvn~~~------------~~~~l~~~G---vdgIiTD~P~~~~  270 (272)
T 3ch0_A          234 KLGMRVIPWTVNTKE------------EIETLISLG---VDGIITDYPDLFF  270 (272)
T ss_dssp             HTTCEECCBCCCSHH------------HHHHHHHHT---CSEEEESCGGGGT
T ss_pred             HcCCEEEEeccCCHH------------HHHHHHHcC---CCEEEeCCHHHHh
Confidence            999999999999874            488999999   9999999998764

>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*

Probab=99.95  E-value=1.3e-28  Score=252.12  Aligned_cols=199  Identities=17%  Similarity=0.097  Sum_probs=148.8

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+||||+                  +|. +.|+|++||++++++. |     
T Consensus        26 A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~------------------~g~-v~~~t~~el~~l~~~~-~-----   80 (250)
T 3ks6_A           26 TAAMALEEVEFDLHPTADGAIVVHHDPTLDATTDM------------------TGA-IVDMTLAKVKTATIRY-G-----   80 (250)
T ss_dssp             HHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBSC------------------CSB-GGGSCHHHHHHCCBTT-S-----
T ss_pred             HHHcCCCEEEEEEeEccCCCEEEECCCccccccCC------------------CCe-eecCcHHHHhcCCCCC-C-----
Confidence            34567779999999999999999999999999999                  888 9999999999999983 2     


Q ss_pred             cCCCCCCCCChhhhhHHHHH-------hcC--------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCc
Q 005894           84 AFDNTQPIPTPDTIYDLFYS-------QHN--------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTT  147 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~-------~~~--------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~  147 (671)
                         .+++||||+|+++.+..       +.+        ..+++.+++++++++ .++++++||++..|+.+++ ..| ..
T Consensus        81 ---~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~-~~p-~~  155 (250)
T 3ks6_A           81 ---AGSHPMTLEELCALYVDSHVNFRCEIKPGVDGLPYEGFVALVIAGLERHSMLERTTFSSFLLASMDELWK-ATT-RP  155 (250)
T ss_dssp             ---TTCCCEEHHHHHHHHTTCSCEEEEEECCCTTSCCCTTHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH-HCC-SC
T ss_pred             ---CCccCcCHHHHHHHHhccCcEEEEEeCCCcccCcchHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHH-HCC-CC
Confidence               27999999999776531       122        257899999999998 5789999999999999995 666 46


Q ss_pred             ceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCC
Q 005894          148 KLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAND  226 (671)
Q Consensus       148 ~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~  226 (671)
                      ++.+. . ...      ..+..+...+...+.. ++.+++....            ...++|+.+|++|++|++||||++
T Consensus       156 ~~~l~-~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~v~~~~~~G~~V~~WTvn~~  215 (250)
T 3ks6_A          156 RLWLV-S-PSV------LQQLGPGAVIETAIAHSIHEIGVHIDT------------ADAGLMAQVQAAGLDFGCWAAHTP  215 (250)
T ss_dssp             EEEEE-C-HHH------HHHHHHHHHHHHHHHTTCCEEEEEGGG------------CCHHHHHHHHHTTCEEEEECCCSH
T ss_pred             cEEEE-e-ccc------ccccchhHHHHHHHhcCCCEEecchhh------------CCHHHHHHHHHCCCEEEEEeCCCH
Confidence            66542 1 100      0001110111111111 2333332222            236899999999999999999988


Q ss_pred             cccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          227 IYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       227 ~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      ..            ++++++.|   ||||+||+|......+
T Consensus       216 ~~------------~~~l~~~G---VDgIiTD~P~~~~~~~  241 (250)
T 3ks6_A          216 SQ------------ITKALDLG---VKVFTTDRPTLAIALR  241 (250)
T ss_dssp             HH------------HHHHHHHT---CSEEEESCHHHHHHHH
T ss_pred             HH------------HHHHHHcC---CCEEEcCCHHHHHHHH
Confidence            54            88999999   9999999999876644

>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}

Probab=99.95  E-value=2.8e-28  Score=250.82  Aligned_cols=197  Identities=14%  Similarity=0.128  Sum_probs=151.8

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCC---cccccccccccccccccccccCCcccccccccccCHHHHccccccccccC
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDV---RLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYT   80 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~---~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~   80 (671)
                      +...+..+||||||+||||++||+||.   +|+||||+                  +|. |.|+|++||++++++     
T Consensus        32 A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~------------------~g~-v~~~t~~eL~~l~~~-----   87 (258)
T 2o55_A           32 CMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDG------------------TSR-IGDLSLEELKRLDVG-----   87 (258)
T ss_dssp             HHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTT------------------TCB-GGGSCHHHHTTCBSS-----
T ss_pred             HHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCCC------------------Cee-hhhCcHHHHhhcCCC-----
Confidence            345677899999999999999999999   99999999                  888 999999999999987     


Q ss_pred             CCccCCCCCCCCChhhhhHHHHH---hc------C--------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhc
Q 005894           81 RSEAFDNTQPIPTPDTIYDLFYS---QH------N--------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKV  142 (671)
Q Consensus        81 r~~~f~~~~~IptL~ev~~~~~~---~~------~--------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~  142 (671)
                            ++++||||+|+++.+..   ..      +        ..+++.+++++++++ .++++|+||++..|+.+++ .
T Consensus        88 ------~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~-~  160 (258)
T 2o55_A           88 ------GGHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKRKESGDHQRLLLLVEKYHMQERVDYCSFHHEALAHLKA-L  160 (258)
T ss_dssp             ------SSCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSSTTSSHHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHH-H
T ss_pred             ------CCCccCCHHHHHHHhhhhcCceEEEEEEccCCccccchHHHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHH-H
Confidence                  27999999999776543   21      2        247889999999998 5789999999999999995 5


Q ss_pred             CCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEe
Q 005894          143 DHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYAS  221 (671)
Q Consensus       143 ~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~w  221 (671)
                      .| ..++.+.+.......   ...+      +..++. .++++++....+            ..++|+.+|++|++|++|
T Consensus       161 ~p-~~~~~~l~~~~~~~~---~~~~------~~~~~~~~~~~v~~~~~~~------------~~~~v~~~~~~G~~v~~w  218 (258)
T 2o55_A          161 CP-DVKITYLFNYMGQPT---PLDF------VEQACYGDANGVSMLFHYL------------TKEQVCTAHEKGLSVTVW  218 (258)
T ss_dssp             CT-TCEEEEECCTTSCCC---CTTH------HHHHHHTTCSEEEEEGGGC------------CHHHHHHHHHTTCEEEEE
T ss_pred             CC-CCcEEEEEeCCCCCC---HHHH------HHHHHhcCCeEEecChhhc------------CHHHHHHHHHCCCEEEEe
Confidence            56 478776431211111   1111      111222 256666554433            258999999999999999


Q ss_pred             ee----cCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccccC
Q 005894          222 GF----ANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID  268 (671)
Q Consensus       222 tv----~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~  268 (671)
                      ||    |++            .+++++++.|   ||||+||+|.....++.
T Consensus       219 Tv~~~~n~~------------~~~~~l~~~G---vdgI~TD~p~~~~~~l~  254 (258)
T 2o55_A          219 MPWIFDDSE------------EDWKKCLELQ---VDLICSNYPFGLMNFLS  254 (258)
T ss_dssp             CCTTCCCCH------------HHHHHHHHHT---CSEEEESCHHHHHHHHT
T ss_pred             eCCCCCCCH------------HHHHHHHHcC---CCEEEeCCHHHHHHHHH
Confidence            99    554            4589999999   99999999998766543

>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}

Probab=99.95  E-value=2.6e-28  Score=258.04  Aligned_cols=224  Identities=15%  Similarity=0.151  Sum_probs=154.3

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCccc--ccccccccCHHHHccccccccccC-
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNV--RGWFSVDYTLEQLGQLYLVQNVYT-   80 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~--~G~~v~d~T~~EL~~l~~~~~~~~-   80 (671)
                      +...+..+||||||+||||++||+||.+|+|||+..           .||...  .++.|.|+|++||++++++..++. 
T Consensus        41 A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~-----------~~G~~~~~~~~~v~~~t~~eL~~l~~~~~~~~~  109 (313)
T 3l12_A           41 TLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRD-----------GQGHWLTGAERQVAEMTYAEIRALDVGGLDGRT  109 (313)
T ss_dssp             HHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBC-----------TTSCBCCSSCCBGGGSCHHHHHTSBCSSCCTTS
T ss_pred             HHHcCCCEEEEEEEECCCCCEEEECCchhccccccc-----------CCCcccCCCCcchhcCcHHHHhhCCCCCccccc
Confidence            345577799999999999999999999999996531           122211  123499999999999999841111 


Q ss_pred             -CCccCC-----CCCCCCChhhhhHHHHH----h------cCc------------cHHHHHHHHHHHcC-CceEEEeCCC
Q 005894           81 -RSEAFD-----NTQPIPTPDTIYDLFYS----Q------HNI------------SAAKYITEYLQKLI-SNVYYISSPE  131 (671)
Q Consensus        81 -r~~~f~-----~~~~IptL~ev~~~~~~----~------~~~------------~~~~~v~~~l~~~~-~~~~~isSf~  131 (671)
                       ..+.|+     .+++||||+|+++.+..    .      .+.            .+++.+++++++++ .++++|+||+
T Consensus       110 ~~~~~~~~~~~~~g~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~SF~  189 (313)
T 3l12_A          110 VYGRRFPDQAFLTGIHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDHAARAEMVAAVLADVRRYRMEPRTVMHSFD  189 (313)
T ss_dssp             HHHHHSTTSCCCSSCCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTCHHHHHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred             cccccCccccccCCCcCCCHHHHHHHHHhcCCCCceEEEEEccCCccccccccHHHHHHHHHHHHHHcCCCCCEEEEcCC
Confidence             002332     36999999999776543    1      121            36788999999998 5789999999


Q ss_pred             hHHHHHhhhhcCCCCcceEEEecCCCCcCC-------CCCCCHHHHhhc-HHHHHHh-hceecCCCcceeecCCCCCCcC
Q 005894          132 IGFLKTMDRKVDHNTTKLVFMVLEPNAVEP-------TTNQTYGSILKN-LTAIKSF-ASGIVVPKSYIIPVNNKTRYLE  202 (671)
Q Consensus       132 ~~~L~~i~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~y~~~~~~-l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~  202 (671)
                      +..|+++++ ..| +.++.+..........       .....|.....+ ...++.. ++++++.+..+           
T Consensus       190 ~~~l~~~~~-~~p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------  256 (313)
T 3l12_A          190 WALLGECRR-QAP-DLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLDV-----------  256 (313)
T ss_dssp             HHHHHHHHH-HCT-TSCEEEEECCCC-------------CCCTTTCCSCHHHHHHHHTCSEEEEBGGGC-----------
T ss_pred             HHHHHHHHH-HCC-CCcEEEEeccccccccccccccccccccchhccccHHHHHHHhCCcEEecchhcC-----------
Confidence            999999995 566 5888875433221000       000001000001 1122222 45665554433           


Q ss_pred             CCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          203 PATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       203 ~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                       ..++|+.||++|++|++||||++..            ++++++.|   ||||+||+|.....++
T Consensus       257 -~~~~v~~~~~~Gl~V~~WTVn~~~~------------~~~l~~~G---VDgIiTD~P~~~~~~l  305 (313)
T 3l12_A          257 -TPELVAEAHDLGLIVLTWTVNEPED------------IRRMATTG---VDGIVTDYPGRTQRIL  305 (313)
T ss_dssp             -CHHHHHHHHHTTCEEEEBCCCSHHH------------HHHHHHHT---CSEEEESCHHHHHHHH
T ss_pred             -CHHHHHHHHHCCCEEEEEcCCCHHH------------HHHHHHcC---CCEEEeCCHHHHHHHH
Confidence             2589999999999999999998854            89999999   9999999999887643

>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3

Probab=99.95  E-value=2.5e-28  Score=249.79  Aligned_cols=192  Identities=11%  Similarity=0.024  Sum_probs=148.6

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+||||+                  +|+ |.|+|++||++++++.       
T Consensus        25 A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~~------------------~g~-v~~~t~~eL~~l~~g~-------   78 (248)
T 1zcc_A           25 ALQQGADYIELDVRESADGVLYVIHDETLDRTTNG------------------TGP-VGHMLSSEIDTLDAGG-------   78 (248)
T ss_dssp             HHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSC------------------CSB-STTSCHHHHTTSCSST-------
T ss_pred             HHHcCCCEEEEEeeEcCCCCEEEECCCccccccCC------------------Ccc-hhhCCHHHHHhCCCCC-------
Confidence            34567789999999999999999999999999999                  898 9999999999999872       


Q ss_pred             cCCCCCCCCChhhhhHHH-------HHhcCc------cHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894           84 AFDNTQPIPTPDTIYDLF-------YSQHNI------SAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKL  149 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~-------~~~~~~------~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~  149 (671)
                          +++||||+|+++.+       ..+.+.      .+++.+++++++++ .++++|+||++..|+.+++ ..| +.++
T Consensus        79 ----~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~-~~p-~~~~  152 (248)
T 1zcc_A           79 ----WFDDRFKGAIVPRLDAYLEHLRGRAGVYIELKYCDPAKVAALVRHLGMVRDTFYFSFSEEMRQGLQS-IAP-EFRR  152 (248)
T ss_dssp             ----TTCGGGTTCCCCBHHHHHHHHTTTCEEEEEEEESCHHHHHHHHHHHTCSTTEEEECSCHHHHHHHHH-HCT-TSEE
T ss_pred             ----CCCCCCHHHHHHHHHhcCcEEEEEeCCCCCcccHHHHHHHHHHHHhCCCCCEEEEECCHHHHHHHHH-HCC-CCcE
Confidence                46899999994322       223221      14789999999998 5789999999999999995 556 4777


Q ss_pred             EEEecCCCCcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcc
Q 005894          150 VFMVLEPNAVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIY  228 (671)
Q Consensus       150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~  228 (671)
                      .+.+.....        .      ...++. .++++.+....+.           ..++|+.+|++|++|++||||++..
T Consensus       153 ~~l~~~~~~--------~------~~~~~~~~~~~i~~~~~~~~-----------~~~~v~~~~~~G~~v~~wTvn~~~~  207 (248)
T 1zcc_A          153 MMTLDIAKS--------P------SLVGAVHHASIIEITPAQMR-----------RPGIIEASRKAGLEIMVYYGGDDMA  207 (248)
T ss_dssp             EEEHHHHSS--------T------HHHHHTTCCSEEEECHHHHH-----------SHHHHHHHHHHTCEEEEECCCCCHH
T ss_pred             EEEecCCcc--------H------HHHHHHcCCCEEEecHHHhC-----------CHHHHHHHHHCCCEEEEECCCCHHH
Confidence            764321100        0      122222 2566666544330           2589999999999999999998854


Q ss_pred             cCCCCCCChHHHHHH-HhhcCceeeeeEeecCCCcccccc
Q 005894          229 SSYSYNFEPEAEYLT-FIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       229 ~~~~~~~d~~~e~~~-~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                                  +++ +++.|   ||||+||+|.....++
T Consensus       208 ------------~~~~l~~~G---vdgIiTD~p~~~~~~~  232 (248)
T 1zcc_A          208 ------------VHREIATSD---VDYINLDRPDLFAAVR  232 (248)
T ss_dssp             ------------HHHHHHHSS---CSEEEESCHHHHHHHH
T ss_pred             ------------HHHHHHHcC---CCEEEECCHHHHHHHH
Confidence                        889 99999   9999999999876643

>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}

Probab=99.94  E-value=1.9e-27  Score=248.43  Aligned_cols=211  Identities=17%  Similarity=0.160  Sum_probs=151.8

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA   84 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~   84 (671)
                      ...+..+||||||+||||++||+||.+|+||||+                  +|. |.|+|++||++++++. +.   ..
T Consensus        57 ~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~------------------~g~-v~~~t~~el~~l~~~~-~~---~~  113 (292)
T 3mz2_A           57 LSYTPATFEIDPRLTKDSVIVLFHDDTLERTSNG------------------TGK-VSDYTWEELQNFRLKD-PE---GN  113 (292)
T ss_dssp             HHHCCCEEEECEEECTTCCEEECCSSSSTTTBSC------------------CSC-GGGSCHHHHTTSCBBC-TT---CC
T ss_pred             HHcCCCEEEEEEeECCCCcEEEECCchhcccCCC------------------CCc-hhhCcHHHHhcCCCCC-CC---Cc
Confidence            3456789999999999999999999999999999                  787 9999999999999973 22   23


Q ss_pred             CCCCCCCCChhhhhHHHHHhc------CccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceEEEecCCC
Q 005894           85 FDNTQPIPTPDTIYDLFYSQH------NISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPN  157 (671)
Q Consensus        85 f~~~~~IptL~ev~~~~~~~~------~~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~  157 (671)
                      |. +++||||+|+++.+....      +..-.+.+++++++++ .++++++||++..|+++++ ..| +.++.+.+... 
T Consensus       114 ~~-~~~iptL~evl~~~~~~~~l~iE~K~~~~~~v~~~l~~~~~~~~vii~Sf~~~~l~~~~~-~~p-~~~~~~l~~~~-  189 (292)
T 3mz2_A          114 IT-NYRIPTLEEAIRWARGKTILILDKKDVPMERTAQLITDMQAEPYVMITVHDGASARFFYE-KNP-NFMFEAFVKTK-  189 (292)
T ss_dssp             BC-SCCCCBHHHHHHHHTTTCCEEECCSSSCHHHHHHHHHHTTCTTTEEEEESSHHHHHHHHH-HCT-TCCEEEECCSH-
T ss_pred             cC-CcCCCCHHHHHHHhCCCcEEEEEECCCcHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHH-HCC-CCeEEEEeCCH-
Confidence            44 789999999977653321      2233478899999998 6799999999999999995 567 47877643110 


Q ss_pred             CcCCCCCCCHHHHhhcHHHHHHhhceecCC--CcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCC
Q 005894          158 AVEPTTNQTYGSILKNLTAIKSFASGIVVP--KSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNF  235 (671)
Q Consensus       158 ~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~--~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~  235 (671)
                                    ..+..+..  .|+...  ..++.|     .|.....++|+.||++|++|++||||+.....  -..
T Consensus       190 --------------~~l~~~~~--~g~~~~~~~~~~~~-----~~~~~~~~~V~~ah~~G~~V~vWTv~t~d~~~--~~~  246 (292)
T 3mz2_A          190 --------------EAVQDYED--NGIPWSHIMAYVGP-----KITPEVREVIDMLHERGVMCMISTAPSDDKLS--TPE  246 (292)
T ss_dssp             --------------HHHHHHHH--TTCCGGGEEEEEES-----SCCHHHHHHHHHHHHTTBCEEEECTTTGGGSS--SHH
T ss_pred             --------------HHHHHHHH--hCCChhheeeeecc-----cccccCHHHHHHHHHCCCEEEEEeCCCcchhh--hcc
Confidence                          11222211  111000  011111     12122358999999999999999998743200  001


Q ss_pred             ChHHHHHHHhhcCceeeeeEeecCCCccccccC
Q 005894          236 EPEAEYLTFIDNSQFAVDGFITDFPTTATEAID  268 (671)
Q Consensus       236 d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~  268 (671)
                      ++..+|+++++.|   ||||+||+|.....++.
T Consensus       247 ~~~~~~~~L~~~G---VDgIiTD~P~~l~~~L~  276 (292)
T 3mz2_A          247 SRAEAYRMIIRQG---VDIIESDRPIEVAEAIS  276 (292)
T ss_dssp             HHHHHHHHHHHTT---CCEEEESCHHHHHHHHG
T ss_pred             ccHHHHHHHHHcC---CCEEEeCCHHHHHHHHH
Confidence            3346799999999   99999999999888664

>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0

Probab=99.93  E-value=1.3e-26  Score=235.44  Aligned_cols=185  Identities=15%  Similarity=0.149  Sum_probs=141.7

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+|   +                    . +.|+|++||++++++        
T Consensus        30 A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~---~--------------------~-v~~~t~~el~~l~~~--------   77 (238)
T 3no3_A           30 ASEIGAYGSEFDVHLTADNVLVVYHDNDIQG---K--------------------H-IQSCTYDELKDLQLS--------   77 (238)
T ss_dssp             HHHTTCSEEEEEEEECTTSCEEECSSSEETT---E--------------------E-GGGSCHHHHTTCBCT--------
T ss_pred             HHHcCCCEEEEEeeEccCCcEEEECCCCCCC---C--------------------C-hHhCCHHHHhhCCCC--------
Confidence            3345778999999999999999999999996   2                    3 999999999999987        


Q ss_pred             cCCCCCCCCChhhhhHHHHHh--------cC--------ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCC
Q 005894           84 AFDNTQPIPTPDTIYDLFYSQ--------HN--------ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNT  146 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~~--------~~--------~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~  146 (671)
                         ++++||||+|+++.+...        .+        ..+++.+++++++++ .++++++||++..|+.+++ ..| .
T Consensus        78 ---~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~-~~p-~  152 (238)
T 3no3_A           78 ---NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPERNRDAARLSVQMVKRMKLAKRTDYISFNMDACKEFIR-LCP-K  152 (238)
T ss_dssp             ---TSCBCCBHHHHHHHHHHCTTCEEEEEECCCSSHHHHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH-HCT-T
T ss_pred             ---CCCcCCcHHHHHHHHhhcCCceEEEEeCCCCCcchhHHHHHHHHHHHHHcCCcCCEEEEECCHHHHHHHHH-HCC-C
Confidence               279999999997765432        12        136788999999998 5789999999999999995 667 4


Q ss_pred             cceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHh-hceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecC
Q 005894          147 TKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSF-ASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFAN  225 (671)
Q Consensus       147 ~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~  225 (671)
                      .++.+... . .       .       ...++.. +.++.+....+          ....++|+.+|++|++|++||||+
T Consensus       153 ~~~~~l~~-~-~-------~-------~~~~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~G~~v~~WTVn~  206 (238)
T 3no3_A          153 SEVSYLNG-E-L-------S-------PMELKELGFTGLDYHYKVL----------QSHPDWVKDCKVLGMTSNVWTVDD  206 (238)
T ss_dssp             SCEEECSS-C-S-------C-------HHHHHHTTCCEEEEEHHHH----------HHSTTHHHHHHHTTCEEEEECCCS
T ss_pred             CeEEEEeC-C-C-------C-------HHHHHHCCCceEeccHHhh----------hCCHHHHHHHHHCCCEEEEECCCC
Confidence            88876321 1 1       0       1122222 44444332211          112479999999999999999998


Q ss_pred             CcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccc
Q 005894          226 DIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEA  266 (671)
Q Consensus       226 ~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~  266 (671)
                      +..            ++++++.|   ||||+||+|......
T Consensus       207 ~~~------------~~~l~~~G---VdgIiTD~P~~~~~~  232 (238)
T 3no3_A          207 PKL------------MEEMIDMG---VDFITTDLPEETQKI  232 (238)
T ss_dssp             HHH------------HHHHHHHT---CSEEEESCHHHHHHH
T ss_pred             HHH------------HHHHHHcC---CCEEECCCHHHHHHH
Confidence            854            88999999   999999999987764

>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3

Probab=99.93  E-value=1.8e-26  Score=233.84  Aligned_cols=189  Identities=19%  Similarity=0.185  Sum_probs=139.4

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+||||+                  +|. |.|+|++||++++          
T Consensus        36 A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~------------------~g~-v~d~T~~eL~~l~----------   86 (234)
T 1o1z_A           36 AIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGL------------------DVK-IRDATVSELKELT----------   86 (234)
T ss_dssp             HHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCE------------------EEE-GGGSCHHHHHHHT----------
T ss_pred             HHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCCc------------------CcC-cccCcHHHHhcCC----------
Confidence            34567779999999999999999999999999999                  888 9999999999987          


Q ss_pred             cCCCCCCCCChhhhhHHHHHhc-------CccHHHHHHHHHHHcCCceEEEeCCChHHHHHhhhhcCCCCcceEEEecCC
Q 005894           84 AFDNTQPIPTPDTIYDLFYSQH-------NISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEP  156 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~~~-------~~~~~~~v~~~l~~~~~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~  156 (671)
                          +++||||+|+++.+....       ...+++.+++++++  .++++++||+   |+.+++ ..| +.++.+.+...
T Consensus        87 ----~~~iptL~evL~~~~~~~~l~iEiK~~~~~~~v~~~l~~--~~~vii~Sf~---l~~~~~-~~p-~~~~~~l~~~~  155 (234)
T 1o1z_A           87 ----DGKITTLKEVFENVSDDKIINIEIKEREAADAVLEISKK--RKNLIFSSFD---LDLLDE-KFK-GTKYGYLIDEE  155 (234)
T ss_dssp             ----TTCCCBHHHHHHHSCTTSEEEEEECCGGGHHHHHHHHTT--CCSEEEEESC---HHHHHH-HCT-TSCEEEECCTT
T ss_pred             ----CCCCCCHHHHHHhcccCCeEEEEeCCccHHHHHHHHHhc--cCCEEEEchh---HHHHHh-hCC-CCcEEEEeccc
Confidence                478999999977653321       23567889999988  4589999999   888885 556 47877643221


Q ss_pred             CCcCCCCCCCHHHHhhcHHHHH-HhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCC
Q 005894          157 NAVEPTTNQTYGSILKNLTAIK-SFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNF  235 (671)
Q Consensus       157 ~~~~~~~~~~y~~~~~~l~~i~-~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~  235 (671)
                      .    .  ..+....   ..+. ...+++.++...+. .+       ....+|+.+|++|++|++||||++..       
T Consensus       156 ~----~--~~~~~~~---~~~~~~~~~~i~~~~~~~g-~~-------~~~~~v~~~~~~G~~v~~wTvn~~~~-------  211 (234)
T 1o1z_A          156 N----Y--GSIENFV---ERVEKERPYSLHVPYQAFE-LE-------YAVEVLRSFRKKGIVIFVWTLNDPEI-------  211 (234)
T ss_dssp             T----T--CSHHHHH---HHHHHHCCSEEEEEGGGGG-SH-------HHHHHHHHHHHTTCEEEEESCCCHHH-------
T ss_pred             c----c--cCHHHHH---HHcCCCCCCEEEeCHHHhc-CC-------ccHHHHHHHHHcCCEEEEeCCCCHHH-------
Confidence            1    0  0111111   1121 12266666544330 00       01489999999999999999998744       


Q ss_pred             ChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          236 EPEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       236 d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                           ++++++   + ||||+||+|.....
T Consensus       212 -----~~~l~~---~-vdgIiTD~P~~~~~  232 (234)
T 1o1z_A          212 -----YRKIRR---E-IDGVITDEVELFVK  232 (234)
T ss_dssp             -----HHHHGG---G-CSEEEESCHHHHHH
T ss_pred             -----HHHHHH---h-CCEEEcCCHHHHhh
Confidence                 888885   5 99999999987654

>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.92  E-value=4.9e-25  Score=228.01  Aligned_cols=214  Identities=16%  Similarity=0.160  Sum_probs=151.0

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA   84 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~   84 (671)
                      ...+..+||||||+||||++||+||.+|+||||+                  +|. |.|+|++||++++++ +++.   .
T Consensus        42 ~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~~------------------~g~-v~~~t~~el~~l~~~-~~~~---~   98 (278)
T 3i10_A           42 IAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTTG------------------KGE-IKNWTLADIKKLKLK-DKDG---K   98 (278)
T ss_dssp             HHTTCSEEEEEEEECTTSCEEECSSSBSTTTBSC------------------CSB-GGGSCHHHHTTSCBB-CTTS---C
T ss_pred             HHcCCCEEEEEEEECCCCeEEEecCcchhhcCCC------------------Cce-eecCcHHHHhcCCCC-CCCc---c
Confidence            3456779999999999999999999999999999                  887 999999999999998 4432   2


Q ss_pred             CCCCCCCCChhhhhHHHHHh------cCccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCC-CcceEEE-ecC
Q 005894           85 FDNTQPIPTPDTIYDLFYSQ------HNISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHN-TTKLVFM-VLE  155 (671)
Q Consensus        85 f~~~~~IptL~ev~~~~~~~------~~~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~-~~~~v~~-~~~  155 (671)
                      | .+++||||+|+++.+...      .+..+++.+++++++++ .++++|+|  ...|+++++.. |. .+.+.|. ...
T Consensus        99 ~-~~~~iptL~evl~~~~~~~~~nie~~~~~~~~v~~~l~~~~~~~~v~i~s--~~~l~~~~~~~-p~~~~~~l~~p~i~  174 (278)
T 3i10_A           99 V-TNYVVPTLEEALLTAKGKIMVNLDKAYDIFDDVYAILEKTETQNQVIMKG--GQPIETVKREF-GSYLDKVLYMPVID  174 (278)
T ss_dssp             B-CSCCCCBHHHHHHHHTTTSEEEEESCGGGHHHHHHHHHHHTCGGGEEEEE--SSCHHHHHHHH-GGGTTTSEEEEEEE
T ss_pred             c-CCCCCCCHHHHHHHhcCCeEEEEecCchHHHHHHHHHHHcCCCCeEEEEE--hHHHHHHHHHC-cCCccceEEEeeec
Confidence            3 379999999997765322      24467899999999998 67899988  34577777433 32 2333331 111


Q ss_pred             CCCcCCCCCCCHHHHhhcHHHHHHhhceecCC-CcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCC
Q 005894          156 PNAVEPTTNQTYGSILKNLTAIKSFASGIVVP-KSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYN  234 (671)
Q Consensus       156 ~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~-~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~  234 (671)
                      .  .++          .....++.|++.+.+. ....++.     +......+|+.+|++|++|++||+-+...  ..+.
T Consensus       175 ~--~~~----------~~~~~i~~~~~~~~p~~~~~~~~~-----~~~~~~~~v~~~~~~g~~v~~nTlw~~~~--~g~~  235 (278)
T 3i10_A          175 L--GNK----------EAEKIITDYLKELRPAAFEIIYSD-----PKNPLPPKIKQLLFKKSLIWYNTLWGSLA--GNHD  235 (278)
T ss_dssp             T--TST----------THHHHHHHHHHHTCCSEEEEEBCC-----TTCSSHHHHHHHHTTTSEEEEECSSGGGB--TTCC
T ss_pred             c--ccc----------chHHHHHHHHHhcCceEEEEeecC-----CccchHHHHHHHHHCCCEEEEEecccccc--cCcc
Confidence            0  010          1234455555444333 2222221     12233689999999999999999754321  1121


Q ss_pred             -----CChHHHHHHHhhc-CceeeeeEeecCCCcccccc
Q 005894          235 -----FEPEAEYLTFIDN-SQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       235 -----~d~~~e~~~~i~~-g~~~Vdgv~td~p~~~~~~i  267 (671)
                           .||..++.++++. |   ||+|+||+|.....++
T Consensus       236 d~~a~~d~~~~~~~l~~~~G---vd~I~TD~P~~l~~yL  271 (278)
T 3i10_A          236 DNLALTDPEKSYGYLIEQLG---ARILQTDQPAYLLDYL  271 (278)
T ss_dssp             HHHHHHCHHHHHHHHHHTTC---EEEEEESCHHHHHHHH
T ss_pred             chhhccChHHHHHHHHhcCC---CCEEEeCCHHHHHHHH
Confidence                 1777889999999 9   9999999999887654

>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A

Probab=99.91  E-value=5.8e-25  Score=221.33  Aligned_cols=177  Identities=16%  Similarity=0.115  Sum_probs=135.2

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...+..+||||||+||||++||+||.+|+   +                    |+ |.|+|++||++++          
T Consensus        31 A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~---~--------------------g~-v~~~t~~eL~~l~----------   76 (224)
T 1vd6_A           31 ALEAGLDGVELDVWPTRDGVFAVRHDPDTP---L--------------------GP-VFQVDYADLKAQE----------   76 (224)
T ss_dssp             HHHTTCSEEEEEEEECTTSCEEECSCSEET---T--------------------EE-GGGSCHHHHHHHS----------
T ss_pred             HHHcCCCEEEEEeeEecCCcEEEECCCccC---C--------------------CC-hhhCCHHHHHhcC----------
Confidence            345577799999999999999999999998   2                    45 9999999999886          


Q ss_pred             cCCCCCCCCChhhhhHHHH--Hhc------Cc------cHHHHHHHHHHHcCCceEEEeCCChHHHHHhhhhcCCCCcce
Q 005894           84 AFDNTQPIPTPDTIYDLFY--SQH------NI------SAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKL  149 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~--~~~------~~------~~~~~v~~~l~~~~~~~~~isSf~~~~L~~i~~~~~~~~~~~  149 (671)
                           ++||||+|+++.+.  ...      +.      .+++.+++++++  .++++++||++..|+.+++ ..| ..++
T Consensus        77 -----~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~--~~~v~i~Sf~~~~l~~~~~-~~p-~~~~  147 (224)
T 1vd6_A           77 -----PDLPRLEEVLALKEAFPQAVFNVELKSFPGLGEEAARRLAALLRG--REGVWVSSFDPLALLALRK-AAP-GLPL  147 (224)
T ss_dssp             -----TTCCBHHHHHGGGGTCTTCEEEEEECCCTTSHHHHHHHHHHHTTT--CSSEEEEESCHHHHHHHHH-HCT-TSCE
T ss_pred             -----CCCCCHHHHHHhhhccCCceEEEEECCCCCccHHHHHHHHHHHhc--CCcEEEEeCCHHHHHHHHH-HCC-CCCE
Confidence                 67999999977654  111      21      267788888887  4589999999999999995 556 4788


Q ss_pred             EEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCccc
Q 005894          150 VFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYS  229 (671)
Q Consensus       150 v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~  229 (671)
                      .+.+....          ...++.     ..++++++....+            ...+|+.+|++|++|++||||++.. 
T Consensus       148 ~~l~~~~~----------~~~~~~-----~~~~~i~~~~~~~------------~~~~v~~~~~~G~~v~~wtvn~~~~-  199 (224)
T 1vd6_A          148 GFLMAEDH----------SALLPC-----LGVEAVHPHHALV------------TEEAVAGWRKRGLFVVAWTVNEEGE-  199 (224)
T ss_dssp             EEEESSCC----------GGGGGG-----SCCSEEEEBGGGC------------CHHHHHHHHHTTCEEEEECCCCHHH-
T ss_pred             EEEecccc----------HHHHHH-----cCCcEEecCcccC------------CHHHHHHHHHCCCEEEEEeCCCHHH-
Confidence            76543210          011111     1245565554433            2589999999999999999998744 


Q ss_pred             CCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          230 SYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       230 ~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                                 ++++++.|   ||||+||+|.....
T Consensus       200 -----------~~~l~~~G---vdgI~TD~p~~~~~  221 (224)
T 1vd6_A          200 -----------ARRLLALG---LDGLIGDRPEVLLP  221 (224)
T ss_dssp             -----------HHHHHHTT---CSEEEESCHHHHTT
T ss_pred             -----------HHHHHhcC---CCEEEcCCHHHHHH
Confidence                       88999999   99999999988665

>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*

Probab=99.86  E-value=2.2e-21  Score=197.72  Aligned_cols=228  Identities=11%  Similarity=0.081  Sum_probs=147.8

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc---ccccCcccccccccccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL---IGKTTAATVFMSKATSVPEIQKERG  346 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L---~rtT~~~~~f~~r~~~~~~~~~~~G  346 (671)
                      ..+||||       |||++||+.|++.||++||+||++|+||++|++||...   .|.++                  .+
T Consensus        29 ~~~i~H~-------vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~------------------~~   83 (302)
T 3rlg_A           29 IWIMGAM-------VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCK------------------KY   83 (302)
T ss_dssp             EEEEESC-------CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSC------------------CC
T ss_pred             eEEEeeh-------hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCC------------------CC
Confidence            3799997       99999999999999999999999999999999999844   44444                  11


Q ss_pred             cccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhh---hcCCcH
Q 005894          347 IFSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLAS---KKGLGV  423 (671)
Q Consensus       347 ~~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~---~~~~~~  423 (671)
                      ..+.+ .+++|+++...             .++.|..                 +.+-+.+++|......+   ..|..+
T Consensus        84 ~~~~~-~l~~lr~~ttp-------------g~~k~~~-----------------~l~lv~~DlK~~~l~~~~~~~aG~~l  132 (302)
T 3rlg_A           84 ENFND-FLKGLRSATTP-------------GNSKYQE-----------------KLVLVVFDLKTGSLYDNQANDAGKKL  132 (302)
T ss_dssp             CBHHH-HHHHHHHHHST-------------TSTTCCT-----------------TCCEEEEEECGGGSCGGGHHHHHHHH
T ss_pred             ccHHH-HHHHHHHhcCC-------------CCCcccc-----------------ceEEEEEEcCCCCCCHHHHHHhHHHH
Confidence            13445 77888775532             0122211                 23468999997654432   234455


Q ss_pred             HHHHHHHHHhcCCCCCCCceEEEEcCChHHHHH---Hh----cCC--C--ceEEEEeecccCCCChhHHHHHHHHHHHhc
Q 005894          424 VDAVTKALSNATFDKQSTQQVMIQSDDSSVLSK---FQ----DVP--A--YKKVLHIRKEVSAAPREVVEEIKKYASAVT  492 (671)
Q Consensus       424 ~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~---lk----~~p--~--~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~  492 (671)
                      ++++++.+-+.|....+ -.|++|+|+.+.++.   ++    +..  +  -+++|-+...      ..+.++.+.....|
T Consensus       133 a~kLl~~~w~~g~~~~r-a~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n------~dl~~i~~~~~~~G  205 (302)
T 3rlg_A          133 AKNLLQHYWNNGNNGGR-AYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGN------DDIGDVGKAYKKAG  205 (302)
T ss_dssp             HHHHHHHTSGGGSSCCC-CEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSC------CCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCCCce-eEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCC------CCHHHHHHHHHhcC
Confidence            56665555554444332 499999998874443   33    221  1  1345544221      23566666666666


Q ss_pred             CCceeeecC--CCcccccchHHHHHHHHc-----C--CeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECC
Q 005894          493 VTRTSVIST--TESFTTNATNILRDLHSA-----N--ISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEF  563 (671)
Q Consensus       493 ~~~~~v~~~--~~~~~~~~~~~V~~~~~~-----G--l~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~  563 (671)
                      +... ++..  ..+.+......++.+.+.     |  ++|++||||++.             ++++++ ++||||||||+
T Consensus       206 i~~h-~wqsDGItnC~~r~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~~-------------~m~~l~-~~GVDGIITD~  270 (302)
T 3rlg_A          206 ITGH-IWQSDGITNCLPRGLSRVNAAVANRDSANGFINKVYYWTVDKRS-------------TTRDAL-DAGVDGIMTNY  270 (302)
T ss_dssp             CCSC-BEEEEECCTTSCCCSHHHHHHHHHHTSTTCCCSEEEEECCCSHH-------------HHHHHH-HTTCSEEEESC
T ss_pred             CcCc-EEecCCcccceeccHHHHHHHHHhccCCCCceEEEEEEeCCCHH-------------HHHHHH-HcCCCEEECCC
Confidence            6432 2211  111223333333333222     3  789999999998             899985 99999999999


Q ss_pred             hhhHHHHHHhcC
Q 005894          564 PATASKYFRSKC  575 (671)
Q Consensus       564 P~~~~~~~~~~~  575 (671)
                      |+.+.+++++..
T Consensus       271 Pd~l~~~l~~~~  282 (302)
T 3rlg_A          271 PDVITDVLNEAA  282 (302)
T ss_dssp             HHHHHHHHTSHH
T ss_pred             HHHHHHHHHhcC
Confidence            999999987543

>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*

Probab=99.85  E-value=9e-23  Score=212.77  Aligned_cols=201  Identities=14%  Similarity=0.114  Sum_probs=128.9

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCc---ccccccccccccccccccccCCcccccccccccCHHHHccccccccccCC
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVR---LNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTR   81 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~---LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r   81 (671)
                      ...+..+||+|||+ |||++||+||.+   |+||||+                  +|+ |.|+ ++||+++++   ++. 
T Consensus        24 ~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~------------------~g~-v~d~-l~eL~~l~~---~~~-   78 (285)
T 1xx1_A           24 LDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCIR------------------WEY-FNVF-LKTLREYTT---PGN-   78 (285)
T ss_dssp             HHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSCC------------------EEE-HHHH-HHHHHHHTS---TTC-
T ss_pred             HHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccCC------------------Ccc-HHHH-HHHHHHccc---CCC-
Confidence            34567899999999 999999999999   9999999                  898 9999 999999998   222 


Q ss_pred             CccCCCCCCCCChhhhhHHHHHhcCc---cHHH------HHH-HHHHHcC-C----ce----EEEeCCChHHHHH-hhhh
Q 005894           82 SEAFDNTQPIPTPDTIYDLFYSQHNI---SAAK------YIT-EYLQKLI-S----NV----YYISSPEIGFLKT-MDRK  141 (671)
Q Consensus        82 ~~~f~~~~~IptL~ev~~~~~~~~~~---~~~~------~v~-~~l~~~~-~----~~----~~isSf~~~~L~~-i~~~  141 (671)
                       +.|.         +.+..++.+.+.   ....      .+. .++++++ .    ++    ++|+||++..|++ +++.
T Consensus        79 -~~~~---------~~L~~l~iEiK~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~  148 (285)
T 1xx1_A           79 -AKYR---------DGFILFVLDLKTGSLSNDQVRPAGENVAKELLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEV  148 (285)
T ss_dssp             -TTCC---------TTCCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHH
T ss_pred             -Cccc---------ccccEEEEecCCCcccccccchhhhhHHHHHHHHHhhccccccccceeEEEEeCCHHHHHHHHHHH
Confidence             3344         211112222221   1111      022 2666665 2    46    8999999999999 9864


Q ss_pred             c------CCCCcceEEEecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCC-----C-CcCCCcHHHH
Q 005894          142 V------DHNTTKLVFMVLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKT-----R-YLEPATTLVT  209 (671)
Q Consensus       142 ~------~~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~-----~-y~~~~~~~V~  209 (671)
                      +      .| ..++.+.+.....  ++ ....       ..+..++..+.+.. .+|....-.     . +......+|+
T Consensus       149 ~~~~~~~~p-~~~~~~l~~~~~~--~~-~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~  216 (285)
T 1xx1_A          149 LKKEGHEDL-LEKVGYDFSGPYL--PS-LPTL-------DATHEAYKKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKS  216 (285)
T ss_dssp             HHHTTCGGG-GGGEEEEECCCCS--SS-CCCH-------HHHHHHHHHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHH
T ss_pred             hhhccccCc-ccceEEecccccc--cc-hhhH-------HHHHHHHHHhCCCC-ccccccccccccccccHHHHhHHHHH
Confidence            1      55 4788775432210  10 1111       11222222222211 111100000     0 1112357899


Q ss_pred             HHHHcCC--eEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCcccccc
Q 005894          210 DAHNAGL--QVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       210 ~ah~~Gl--~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      .+|++|+  +|++||||++..            ++++++.|   ||||+||+|......+
T Consensus       217 ~~~~~Glg~~V~~WTvn~~~~------------~~~l~~~G---VDgIiTD~P~~~~~~l  261 (285)
T 1xx1_A          217 RDSANGFINKIYYWSVDKVST------------TKAALDVG---VDGIMTNYPNVLIGVL  261 (285)
T ss_dssp             HTSTTCCCCEEEEECCCSHHH------------HHHHHHHT---CSEEEESCHHHHHHHH
T ss_pred             HHHhcCCCCeEEEeeCCCHHH------------HHHHHhcC---CCEEEeCCHHHHHHHH
Confidence            9999999  999999998854            88999999   9999999999877644

>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*

Probab=99.39  E-value=3.4e-14  Score=144.95  Aligned_cols=204  Identities=15%  Similarity=0.099  Sum_probs=120.5

Q ss_pred             cCCCeEEEeeceeecCCeEEeecCCccccc---ccccccccccccccccCCcccccccccccCHHHHccccccccccCCC
Q 005894            6 CLSNAIMLCNLQFSKDGLGVCLSDVRLNNI---TTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRS   82 (671)
Q Consensus         6 ~~~~~~iE~DVqlTkDG~~Vv~HD~~Ldrt---T~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~   82 (671)
                      ..|.-+||+||++||||++|++||-...+|   +..                  .-. +.+ .+++|+++.-...     
T Consensus        47 ~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~------------------~~~-~~~-~l~~lr~~ttpg~-----  101 (302)
T 3rlg_A           47 NLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKK------------------YEN-FND-FLKGLRSATTPGN-----  101 (302)
T ss_dssp             HTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCC------------------CCB-HHH-HHHHHHHHHSTTS-----
T ss_pred             HcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCC------------------Ccc-HHH-HHHHHHHhcCCCC-----
Confidence            457789999999999999999999855444   332                  112 556 8888987664211     


Q ss_pred             ccCCCCCCCCChhhh-----hHHHHHhcCccHHHHHHHHHHHcC----CceEEEeCCChHHHHHhhh---hcCCCC----
Q 005894           83 EAFDNTQPIPTPDTI-----YDLFYSQHNISAAKYITEYLQKLI----SNVYYISSPEIGFLKTMDR---KVDHNT----  146 (671)
Q Consensus        83 ~~f~~~~~IptL~ev-----~~~~~~~~~~~~~~~v~~~l~~~~----~~~~~isSf~~~~L~~i~~---~~~~~~----  146 (671)
                      ++|. ..-+.-.=|+     ....-...|.++++++++.+-..+    ...++||+|+..-++.|++   .+...+    
T Consensus       102 ~k~~-~~l~lv~~DlK~~~l~~~~~~~aG~~la~kLl~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~L  180 (302)
T 3rlg_A          102 SKYQ-EKLVLVVFDLKTGSLYDNQANDAGKKLAKNLLQHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPEL  180 (302)
T ss_dssp             TTCC-TTCCEEEEEECGGGSCGGGHHHHHHHHHHHHHHHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGGG
T ss_pred             Cccc-cceEEEEEEcCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHHH
Confidence            2333 1111111122     111111347788888888887644    2468899999854444443   221111    


Q ss_pred             -cceEEEecCCCCcCCCCCCCHHHHhh--cHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHc-----C--C
Q 005894          147 -TKLVFMVLEPNAVEPTTNQTYGSILK--NLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNA-----G--L  216 (671)
Q Consensus       147 -~~~v~~~~~~~~~~~~~~~~y~~~~~--~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~-----G--l  216 (671)
                       -+..|.|...+.     -..+..+.+  +++....+++||..++  +  ..         ...+++|.+.     |  +
T Consensus       181 ldkvG~Dfs~n~d-----l~~i~~~~~~~Gi~~h~wqsDGItnC~--~--r~---------~~rl~~ai~~RDs~~~~i~  242 (302)
T 3rlg_A          181 MDKVGHDFSGNDD-----IGDVGKAYKKAGITGHIWQSDGITNCL--P--RG---------LSRVNAAVANRDSANGFIN  242 (302)
T ss_dssp             GGGEEEEECSCCC-----HHHHHHHHHHTTCCSCBEEEEECCTTS--C--CC---------SHHHHHHHHHHTSTTCCCS
T ss_pred             hhhcCccccCCCC-----HHHHHHHHHhcCCcCcEEecCCcccce--e--cc---------HHHHHHHHHhccCCCCceE
Confidence             233443332211     112222222  1222334467777664  1  11         3445544444     3  8


Q ss_pred             eEEEeeecCCcccCCCCCCChHHHHHHHhhcCceeeeeEeecCCCccccccC
Q 005894          217 QVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAID  268 (671)
Q Consensus       217 ~V~~wtv~~~~~~~~~~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~~i~  268 (671)
                      +|++||||++..            ++++++.|   |||||||+|......+.
T Consensus       243 ~V~vWTVNd~~~------------m~~l~~~G---VDGIITD~Pd~l~~~l~  279 (302)
T 3rlg_A          243 KVYYWTVDKRST------------TRDALDAG---VDGIMTNYPDVITDVLN  279 (302)
T ss_dssp             EEEEECCCSHHH------------HHHHHHTT---CSEEEESCHHHHHHHHT
T ss_pred             EEEEEeCCCHHH------------HHHHHHcC---CCEEECCCHHHHHHHHH
Confidence            999999999855            89999999   99999999999877543

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=92.08  E-value=0.084  Score=60.15  Aligned_cols=48  Identities=13%  Similarity=0.128  Sum_probs=41.8

Q ss_pred             eccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          274 THNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       274 AHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      +|+-+   ....-+.|.++|.+|+..||.+||+|++=-.||.|||+|-.+|
T Consensus       178 sHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tl  228 (624)
T 1djx_A          178 SHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTF  228 (624)
T ss_dssp             ESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSC
T ss_pred             ccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCcc
Confidence            67643   2345689999999999999999999999999999999999887

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=91.54  E-value=0.11  Score=60.90  Aligned_cols=49  Identities=12%  Similarity=0.113  Sum_probs=41.8

Q ss_pred             EeccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEcc--CCeEEEecCCCc
Q 005894          273 ITHNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSK--EGVAFCLESPDL  321 (671)
Q Consensus       273 IAHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTk--DGv~Vv~HD~~L  321 (671)
                      -+|+=+   ....-+.|.++|.+|+..||.+||+|++=-.  ||.|||+|-.+|
T Consensus       325 SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tl  378 (799)
T 2zkm_X          325 SSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTM  378 (799)
T ss_dssp             BBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSS
T ss_pred             ccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCcc
Confidence            366643   2345689999999999999999999999877  999999999887

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=90.28  E-value=0.15  Score=59.53  Aligned_cols=49  Identities=14%  Similarity=0.159  Sum_probs=41.9

Q ss_pred             EeccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          273 ITHNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       273 IAHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      .+|+=+   ....-+.|.++|..|+..||.+||+|++=-.||+|||+|-.+|
T Consensus       336 sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tl  387 (816)
T 3qr0_A          336 SSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTM  387 (816)
T ss_dssp             BBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSS
T ss_pred             ccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCcc
Confidence            466542   2345688999999999999999999999999999999999887

>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}

Probab=89.96  E-value=4.4  Score=38.67  Aligned_cols=144  Identities=15%  Similarity=0.153  Sum_probs=98.6

Q ss_pred             CCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC--C
Q 005894          384 KGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV--P  461 (671)
Q Consensus       384 ~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~--p  461 (671)
                      ...+.+|+++.+.+++... .+++.++.-.      |..--+.-++.|.+. +.    .. -+.|.....++..|+.  .
T Consensus        37 ~g~i~~l~~~v~~lk~~~K-~v~Vh~Dli~------Gls~d~~ai~fL~~~-~~----pd-GIIsTk~~~i~~Ak~~gL~  103 (192)
T 3kts_A           37 ETHVAQLKALVKYAQAGGK-KVLLHADLVN------GLKNDDYAIDFLCTE-IC----PD-GIISTRGNAIMKAKQHKML  103 (192)
T ss_dssp             SEETTTHHHHHHHHHHTTC-EEEEEGGGEE------TCCCSHHHHHHHHHT-TC----CS-EEEESCHHHHHHHHHTTCE
T ss_pred             cCcHHHHHHHHHHHHHcCC-eEEEecCchh------ccCCcHHHHHHHHhC-CC----CC-EEEeCcHHHHHHHHHCCCe
Confidence            4679999999999998754 5666666432      222223445666652 22    12 4556789999999988  6


Q ss_pred             CceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHH-cCCeEEEEec-cCccccccccc
Q 005894          462 AYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHS-ANISVYISAL-RNEYLSIAFDY  539 (671)
Q Consensus       462 ~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~-~Gl~V~vwtv-n~~~~~~~~d~  539 (671)
                      .++++|++++       ..++...+......++.-.+.|..      -+++++++++ -+.++.+-++ ++++       
T Consensus       104 tIqR~FliDS-------~al~~~~~~i~~~~PD~iEiLPGi------~p~iI~~i~~~~~~PiIaGGlI~~~e-------  163 (192)
T 3kts_A          104 AIQRLFMIDS-------SAYNKGVALIQKVQPDCIELLPGI------IPEQVQKMTQKLHIPVIAGGLIETSE-------  163 (192)
T ss_dssp             EEEEEECCSH-------HHHHHHHHHHHHHCCSEEEEECTT------CHHHHHHHHHHHCCCEEEESSCCSHH-------
T ss_pred             EEEEEEEEEc-------chHHHHHHHHhhcCCCEEEECCch------hHHHHHHHHHhcCCCEEEECCcCCHH-------
Confidence            7888887753       345555566666777655566642      3578888765 5888888865 5555       


Q ss_pred             CCChHHHHHHHHhhcCccEEEECChhhH
Q 005894          540 LADPLIEVATFAQGVGVDGITTEFPATA  567 (671)
Q Consensus       540 ~~D~~~e~~~~l~~~GVDgIiTD~P~~~  567 (671)
                            ++...+ +.|+++|.|-.+...
T Consensus       164 ------dv~~al-~aGA~aVsTs~~~LW  184 (192)
T 3kts_A          164 ------QVNQVI-ASGAIAVTTSNKHLW  184 (192)
T ss_dssp             ------HHHHHH-TTTEEEEEECCGGGG
T ss_pred             ------HHHHHH-HcCCeEEEeCCHHHh
Confidence                  788875 999999999887764

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=87.78  E-value=0.23  Score=58.43  Aligned_cols=49  Identities=18%  Similarity=0.148  Sum_probs=40.4

Q ss_pred             EeccCC---CCCCCchhHHHHHHHHHCCCCeEEeceeEc--cCCeEEEecCCCc
Q 005894          273 ITHNGA---SGVYAGCTDLAYQQAVDDGADIIDCTVQMS--KEGVAFCLESPDL  321 (671)
Q Consensus       273 IAHRG~---s~~~PENTl~Af~~Ai~~GaD~IE~DVqlT--kDGv~Vv~HD~~L  321 (671)
                      -+|+=+   ....-+.|.++|.+|+..||.+||+|++=-  .||+|||+|..+|
T Consensus       329 ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~  382 (885)
T 3ohm_B          329 SSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTM  382 (885)
T ss_dssp             CBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSE
T ss_pred             ccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCcc
Confidence            356643   223457889999999999999999999965  7899999999987

>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1

Probab=87.58  E-value=5.7  Score=37.71  Aligned_cols=140  Identities=18%  Similarity=0.177  Sum_probs=93.6

Q ss_pred             CcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC--CC
Q 005894          385 GKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV--PA  462 (671)
Q Consensus       385 ~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~--p~  462 (671)
                      +.+..|+++.+.+++.+ ..+++.++.-.      |..--+.-++.|+..+..       -|.|.....+...|+.  -.
T Consensus        40 g~I~~L~~iv~~ik~~g-K~vivh~DlI~------GLs~d~~ai~fL~~~~pd-------GIIsTk~~~i~~Akk~GL~t  105 (188)
T 1vkf_A           40 SDILNLKFHLKILKDRG-KTVFVDMDFVN------GLGEGEEAILFVKKAGAD-------GIITIKPKNYVVAKKNGIPA  105 (188)
T ss_dssp             EETTTHHHHHHHHHHTT-CEEEEEGGGEE------TCCSSHHHHHHHHHHTCS-------EEEESCHHHHHHHHHTTCCE
T ss_pred             CcHHHHHHHHHHHHHCC-CeEEEecCccc------ccCCCHHHHHHHHhcCCC-------EEEcCcHHHHHHHHHcCCEE
Confidence            45778999999998774 36788877532      222112334444444332       4566788999999987  77


Q ss_pred             ceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEec-cCcccccccccCC
Q 005894          463 YKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISAL-RNEYLSIAFDYLA  541 (671)
Q Consensus       463 ~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv-n~~~~~~~~d~~~  541 (671)
                      ++++|++++       ..++...+......++.-.+.|.     ...+++++++  .+.++.+-++ ++++         
T Consensus       106 IqR~FliDs-------~al~~~~~~I~~~kPD~iEiLPg-----~v~p~~I~~v--~~~PiIaGGlI~t~e---------  162 (188)
T 1vkf_A          106 VLRFFALDS-------KAVERGIEQIETLGVDVVEVLPG-----AVAPKVARKI--PGRTVIAAGLVETEE---------  162 (188)
T ss_dssp             EEEEECCSH-------HHHHHHHHHHHHHTCSEEEEESG-----GGHHHHHTTS--TTSEEEEESCCCSHH---------
T ss_pred             eeEEEEEEe-------HHHhhhhhhccccCCCeEeecCC-----CchHHHHHHh--cCCCEEEECCcCCHH---------
Confidence            899998864       23444444555566665555553     1136788888  6888888854 5555         


Q ss_pred             ChHHHHHHHHhhcCccEEEECChhhH
Q 005894          542 DPLIEVATFAQGVGVDGITTEFPATA  567 (671)
Q Consensus       542 D~~~e~~~~l~~~GVDgIiTD~P~~~  567 (671)
                          ++.+ + +.|+++|.|-.++..
T Consensus       163 ----dv~~-l-~aGA~aIsTs~~~LW  182 (188)
T 1vkf_A          163 ----EARE-I-LKHVSAISTSSRILW  182 (188)
T ss_dssp             ----HHHH-H-TTTSSEEEECCHHHH
T ss_pred             ----HHHH-H-HCCCeEEEeCCHHHh
Confidence                6777 6 999999999988764

>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A

Probab=83.94  E-value=2.2  Score=43.87  Aligned_cols=49  Identities=16%  Similarity=0.087  Sum_probs=36.9

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEcc-CCeEEEecCCCcc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSK-EGVAFCLESPDLI  322 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTk-DGv~Vv~HD~~L~  322 (671)
                      ..+-+|+-+...    +...+.+|++.|+..||+||+-.. .|.+-|+|...|.
T Consensus        32 T~~g~HNSY~~g----~~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~   81 (339)
T 3h4x_A           32 TSVGVHNAYEKE----KYRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLG   81 (339)
T ss_dssp             EEEEETTTTCTT----TCSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSS
T ss_pred             eEeecccccccc----CcccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccc
Confidence            356678765322    146789999999999999999874 5579999987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	671
d1ydya1	328	c.1.18.3 (A:29-356) Glycerophosphodiester phosphod	1e-25
d1ydya1	328	c.1.18.3 (A:29-356) Glycerophosphodiester phosphod	6e-17
d1o1za_	226	c.1.18.3 (A:) Hypothetical protein TM1621 {Thermot	2e-10
d1zcca1	240	c.1.18.3 (A:1-240) Glycerophosphodiester phosphodi	4e-10
d1vd6a1	217	c.1.18.3 (A:8-224) Putative glycerophosphodiester	1e-09

>d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]} Length = 328

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Glycerophosphodiester phosphodiesterase GlpQ
species: Escherichia coli [TaxId: 562]

 Score =  105 bits (263), Expect = 1e-25
 Identities = 63/336 (18%), Positives = 117/336 (34%), Gaps = 43/336 (12%)

Query: 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTA 327
           +  ++I H GASG     T  A   A   GAD ++  + M+K+     L    L   T  
Sbjct: 1   NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDV 60

Query: 328 ATVFMSKATSVPEIQKERGIFSFDLTWTEIQSLKPQISSPFDKSNPPII---RNPEAKNK 384
           A  F  +A       K+   ++ D T  EI+SLK       +          R P  K+ 
Sbjct: 61  ADRFPDRAR------KDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSD 114

Query: 385 GKFVTLDGFLEFAKTKAVSGVLININN----AAYLASKKGLGVVDAVTKALSNATFDKQS 440
            +  T +  +EF +    S            A +   ++G  +     + L         
Sbjct: 115 FRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVL-KKYGYTGK 173

Query: 441 TQQVMIQSDDSSVLSKF--QDVPAYKKVLHIRKEVSAAPR-------------------- 478
             +V +Q  D+  L +   +  P     L++ + ++                        
Sbjct: 174 DDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWM 233

Query: 479 ---EVVEEIKKYASAVTVTRTSVISTTES-FTTNATNILRDLHSANISVYISALRNEYLS 534
                ++++ +YA  +      +I  T        T +++D     + V+   +R++ L 
Sbjct: 234 FKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKL- 292

Query: 535 IAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY 570
              +Y  D            GV+G+ T+FP  A K+
Sbjct: 293 --PEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKF 326

>d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]} Length = 328

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Glycerophosphodiester phosphodiesterase GlpQ
species: Escherichia coli [TaxId: 562]

 Score = 80.2 bits (196), Expect = 6e-17
 Identities = 47/301 (15%), Positives = 92/301 (30%), Gaps = 54/301 (17%)

Query: 14  CNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLE------ 67
            +L  +KD   V L D  L+ +T +   F D       +G      F++D          
Sbjct: 36  QDLVMTKDDNLVVLHDHYLDRVTDVADRFPD---RARKDGRYYAIDFTLDEIKSLKFTEG 92

Query: 68  -QLGQLYLVQNVYTRSEAFDNTQPIPT--------------------------PDTIYDL 100
             +     VQ    R     +   + T                              +  
Sbjct: 93  FDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQ 152

Query: 101 FYSQHNISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHN---TTKLVFMVLEPN 157
                     + + +Y      +  Y+   +   LK +  +++        LV ++   +
Sbjct: 153 EGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTD 212

Query: 158 AVEPTTNQTYGSIL----------KNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTL 207
             E    Q  GS +            +  +  +A GI      +I   ++   ++  T +
Sbjct: 213 WNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKL-TGM 271

Query: 208 VTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLTFIDNSQFAVDGFITDFPTTATEAI 267
           V DA    L V+     +D    Y+ +     + L      +  V+G  TDFP  A + +
Sbjct: 272 VQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYN----KAGVNGLFTDFPDKAVKFL 327

Query: 268 D 268
           +
Sbjct: 328 N 328

>d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]} Length = 226

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Hypothetical protein TM1621
species: Thermotoga maritima [TaxId: 2336]

 Score = 58.9 bits (141), Expect = 2e-10
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL 321
              +++ H G S  Y   T  A+ +A++ GA+ ++  V++SK+G        DL
Sbjct: 3   HHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDL 56

>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]} Length = 240

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Glycerophosphodiester phosphodiesterase UgpQ
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 58.5 bits (140), Expect = 4e-10
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 272 IITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFC 315
           I++H GA+      T  A   A+  GAD I+  V+ S +GV + 
Sbjct: 4   IVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYV 47

>d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]} Length = 217

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Putative glycerophosphodiester phosphodiesterase TTHB141
species: Thermus thermophilus [TaxId: 274]

 Score = 56.5 bits (135), Expect = 1e-09
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFC 315
           PL + H GA       T  +++ A++ G D ++  V  +++GV   
Sbjct: 1   PLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAV 46

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	671
d1zcca1	240	Glycerophosphodiester phosphodiesterase UgpQ {Agro	100.0
d1ydya1	328	Glycerophosphodiester phosphodiesterase GlpQ {Esch	100.0
d1o1za_	226	Hypothetical protein TM1621 {Thermotoga maritima [	100.0
d1vd6a1	217	Putative glycerophosphodiester phosphodiesterase T	100.0
d1ydya1	328	Glycerophosphodiester phosphodiesterase GlpQ {Esch	99.96
d1zcca1	240	Glycerophosphodiester phosphodiesterase UgpQ {Agro	99.95
d1o1za_	226	Hypothetical protein TM1621 {Thermotoga maritima [	99.93
d1vd6a1	217	Putative glycerophosphodiester phosphodiesterase T	99.88
d1qasa3	327	Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n	94.7
d2zkmx4	349	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	92.9
d1vkfa_	172	Glycerol uptake operon antiterminator-related prot	84.12
d1ojxa_	251	Archaeal fructose 1,6-bisphosphate aldolase {Archa	80.26

>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Glycerophosphodiester phosphodiesterase UgpQ
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.5e-45  Score=373.17  Aligned_cols=233  Identities=19%  Similarity=0.233  Sum_probs=188.7

Q ss_pred             CceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCcccccccccccccccccccccc
Q 005894          269 RPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIF  348 (671)
Q Consensus       269 ~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~  348 (671)
                      +.+||||||+++.|||||++||++|++.|||+||||||+||||++||+||.+++|+|+                 ++| .
T Consensus         1 mt~iiaHRG~~~~~pENT~~a~~~A~~~G~~~iE~Dv~~TkDg~~Vv~HD~~l~r~t~-----------------~~~-~   62 (240)
T d1zcca1           1 MTKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTN-----------------GTG-P   62 (240)
T ss_dssp             CCEEEETTTTTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSS-----------------CCS-B
T ss_pred             CCEEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEEecCCCEEEecccccccccc-----------------ccc-c
Confidence            3579999999999999999999999999999999999999999999999999999999                 778 8


Q ss_pred             cccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHH
Q 005894          349 SFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVT  428 (671)
Q Consensus       349 i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~  428 (671)
                      |.++||+||++|+++  .+|+         ..+ .+++||||+|+|++++++  .+++||||...          .+.+.
T Consensus        63 v~~~t~~el~~l~~~--~~~~---------~~~-~~~~IptL~evl~~~~~~--~~l~iEiK~~~----------~~~v~  118 (240)
T d1zcca1          63 VGHMLSSEIDTLDAG--GWFD---------DRF-KGAIVPRLDAYLEHLRGR--AGVYIELKYCD----------PAKVA  118 (240)
T ss_dssp             STTSCHHHHTTSCSS--TTTC---------GGG-TTCCCCBHHHHHHHHTTT--CEEEEEEEESC----------HHHHH
T ss_pred             HHHhhHHHHHHhhcc--CcCc---------ccc-CCCcCChHHHhhhccccc--ceeEEEEccCc----------chhhh
Confidence            999999999999987  3333         233 358999999999999876  58999999753          35678


Q ss_pred             HHHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccc
Q 005894          429 KALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTT  507 (671)
Q Consensus       429 ~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~  507 (671)
                      ++++++++.    ++++++||+++.+++++++ |+++++++++....    ....      ...... ..+...  ....
T Consensus       119 ~l~~~~~~~----~~v~~~Sf~~~~l~~~~~~~P~~~~~~~~~~~~~----~~~~------~~~~~~-~~~~~~--~~~~  181 (240)
T d1zcca1         119 ALVRHLGMV----RDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKS----PSLV------GAVHHA-SIIEIT--PAQM  181 (240)
T ss_dssp             HHHHHHTCS----TTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSS----THHH------HHTTCC-SEEEEC--HHHH
T ss_pred             HHHHHHHhh----cccccccccHHHHHHHHHhhhccceEEeeccccc----chhH------HHHhcc-cccccc--hhhh
Confidence            889999887    7999999999999999999 99999998754321    1111      111111 111111  1123


Q ss_pred             cchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHHHHh
Q 005894          508 NATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKYFRS  573 (671)
Q Consensus       508 ~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~~~~  573 (671)
                      .++++++++|++|+.|++||+|++.             ++.+++.++||||||||+|+.+.++++.
T Consensus       182 ~~~~~v~~~~~~Gl~v~~wTvnd~~-------------~~~~~l~~~gVdgI~TD~P~l~~~vr~~  234 (240)
T d1zcca1         182 RRPGIIEASRKAGLEIMVYYGGDDM-------------AVHREIATSDVDYINLDRPDLFAAVRSG  234 (240)
T ss_dssp             HSHHHHHHHHHHTCEEEEECCCCCH-------------HHHHHHHHSSCSEEEESCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCEEEEEccCCHH-------------HHHHHHHHcCCCEEEeCcHHHHHHHHHH
Confidence            4678999999999999999999875             5554446999999999999999987753

>d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Glycerophosphodiester phosphodiesterase GlpQ
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-44  Score=378.61  Aligned_cols=291  Identities=22%  Similarity=0.283  Sum_probs=217.1

Q ss_pred             CCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894          268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI  347 (671)
Q Consensus       268 ~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~  347 (671)
                      ++|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|.|+|+....+..+...     .+.| 
T Consensus         1 ~~~liIaHRG~~~~~PENTl~af~~A~~~gad~iE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~-----~~~~-   74 (328)
T d1ydya1           1 NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK-----DGRY-   74 (328)
T ss_dssp             CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT-----TSCC-
T ss_pred             CCCEEEeCCCCCCCCCccHHHHHHHHHHcCCCEEEEeeeEccCCcEEEECCchhhcccCCCCCccccccc-----CCCc-
Confidence            3789999999999999999999999999999999999999999999999999999999954444333221     2566 


Q ss_pred             ccccCCHHHHhccCCCcCCCCCCCC---C--CCCCCcccccCCcccCHHHHHHHHhcc-----CcccEEEEecCchhhhh
Q 005894          348 FSFDLTWTEIQSLKPQISSPFDKSN---P--PIIRNPEAKNKGKFVTLDGFLEFAKTK-----AVSGVLININNAAYLAS  417 (671)
Q Consensus       348 ~i~dlT~~EL~~L~~~~~~~f~~~~---~--~~~r~~~~~~~~~ipTLeEvL~~~~~~-----~~~~i~IeIK~~~~~~~  417 (671)
                      .|.++||+||++|+.+..  +....   .  -..|.+....+++||||+|+++.+++.     ..+++++|||.+.... 
T Consensus        75 ~v~~~t~~el~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~iptL~~~~~~~~~~~~~~~~~~~~~iEiK~~~~~~-  151 (328)
T d1ydya1          75 YAIDFTLDEIKSLKFTEG--FDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHH-  151 (328)
T ss_dssp             BGGGSCHHHHHHSCBCSC--EEEETTEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHH-
T ss_pred             eeeecchhhhhccccccc--cccccccccccccccccccCCCcccCcHHHHHHHHHHHhhhcCCCceeeeccCCcchhh-
Confidence            799999999999998732  11000   0  012334444678999999999999752     2357999999877654 


Q ss_pred             hcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC------CCceEEEEeeccc------------------
Q 005894          418 KKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV------PAYKKVLHIRKEV------------------  473 (671)
Q Consensus       418 ~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~------p~~~~~~l~~~~~------------------  473 (671)
                      ..+...++.+..++++++.... .++|+++||++++|+.+++.      +.++.+.++....                  
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~SF~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (328)
T d1ydya1         152 QEGKDIAAKTLEVLKKYGYTGK-DDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNY  230 (328)
T ss_dssp             HTTCCHHHHHHHHHHHTTCCST-TSSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECCC
T ss_pred             hcchhhHHHHHHHHHHhcccCC-CceEEEEecCHHHHHHHHHHcCcccccccceeeeecccccchhccccccccccccch
Confidence            3567888999999999876532 25899999999999999854      3344554443210                  


Q ss_pred             C-CCChhHHHHHHHHHHHhcCCceeeecCC-CcccccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHH
Q 005894          474 S-AAPREVVEEIKKYASAVTVTRTSVISTT-ESFTTNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFA  551 (671)
Q Consensus       474 ~-d~~~~~l~~i~~~a~~v~~~~~~v~~~~-~~~~~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l  551 (671)
                      . ......+..+..+|.++++....+.+.. .......+.+|+++|++|+.|++||+|++.   .+++..|...++...+
T Consensus       231 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~gl~v~~wTvn~~~---~~~~~~d~~~~~~~~~  307 (328)
T d1ydya1         231 DWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDK---LPEYTPDVNQLYDALY  307 (328)
T ss_dssp             GGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTS---CCTTCSSHHHHHHHHH
T ss_pred             hhhcChhhHHHHHhhCCeeecchhhcccccccccccCCHHHHHHHHHCCCEEEEEccCChH---HhhhccCHHHHHHHHH
Confidence            0 0123445556666666655544443332 122345678999999999999999999986   4566778887777766


Q ss_pred             hhcCccEEEECChhhHHHHH
Q 005894          552 QGVGVDGITTEFPATASKYF  571 (671)
Q Consensus       552 ~~~GVDgIiTD~P~~~~~~~  571 (671)
                      .++||||||||+|+++.+++
T Consensus       308 ~~~GVDgIiTD~P~~~~~~l  327 (328)
T d1ydya1         308 NKAGVNGLFTDFPDKAVKFL  327 (328)
T ss_dssp             TTSCCSEEEESCHHHHHHHH
T ss_pred             HHcCCcEEEEcCHHHHHHHh
Confidence            78999999999999999987

>d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Hypothetical protein TM1621
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.6e-43  Score=352.80  Aligned_cols=222  Identities=21%  Similarity=0.232  Sum_probs=174.6

Q ss_pred             CCceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccc
Q 005894          268 DRPLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGI  347 (671)
Q Consensus       268 ~~p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~  347 (671)
                      ++|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+                 ++| 
T Consensus         3 ~~~~iiaHRG~~~~~pENT~~af~~a~~~g~~~iE~Dv~~T~Dg~~Vv~HD~~l~r~t~-----------------~~~-   64 (226)
T d1o1za_           3 HHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFG-----------------LDV-   64 (226)
T ss_dssp             CCCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHC-----------------EEE-
T ss_pred             CCCEEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEccCCCEEeeccceeeeeec-----------------ccc-
Confidence            37999999999999999999999999999999999999999999999999999999999                 677 


Q ss_pred             ccccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHH
Q 005894          348 FSFDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAV  427 (671)
Q Consensus       348 ~i~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v  427 (671)
                      .|.++||+||++|+.                      ++||||+|+|+++++.  ..++||||..         ..++.+
T Consensus        65 ~i~~~t~~el~~l~~----------------------~~iptL~evl~~~~~~--~~l~iEiK~~---------~~~~~~  111 (226)
T d1o1za_          65 KIRDATVSELKELTD----------------------GKITTLKEVFENVSDD--KIINIEIKER---------EAADAV  111 (226)
T ss_dssp             EGGGSCHHHHHHHTT----------------------TCCCBHHHHHHHSCTT--SEEEEEECCG---------GGHHHH
T ss_pred             eeeecchhhhhhhhh----------------------hcchhHHHHHHHhhcc--cccchhhccc---------cccchh
Confidence            899999999999853                      4799999999999875  5799999965         345677


Q ss_pred             HHHHHhcCCCCCCCceEEEEcCChHHHHHHhcCCCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcc-c
Q 005894          428 TKALSNATFDKQSTQQVMIQSDDSSVLSKFQDVPAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESF-T  506 (671)
Q Consensus       428 ~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~-~  506 (671)
                      +++++++       ++++++||+++.++++.  |.++.++++....    ...+..+...+.....  ..++..+..+ .
T Consensus       112 ~~~~~~~-------~~vi~~SF~~~~l~~~~--~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  176 (226)
T d1o1za_         112 LEISKKR-------KNLIFSSFDLDLLDEKF--KGTKYGYLIDEEN----YGSIENFVERVEKERP--YSLHVPYQAFEL  176 (226)
T ss_dssp             HHHHTTC-------CSEEEEESCHHHHHHHC--TTSCEEEECCTTT----TCSHHHHHHHHHHHCC--SEEEEEGGGGGS
T ss_pred             hhhhhhc-------cceeccccchHHHHHHH--hccceeeEecccc----cchhHHHHHhhhhccc--ccccCchhhhhh
Confidence            7777553       58999999998876543  6777887764421    1122233333333333  2233222111 1


Q ss_pred             ccchHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHH
Q 005894          507 TNATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY  570 (671)
Q Consensus       507 ~~~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~  570 (671)
                      ...+++++.+|++|+.|++||+|+++              +.+++ ++||||||||+|+.+.++
T Consensus       177 ~~~~~~v~~~~~~g~~v~~wTVN~~~--------------~~~~l-~~gVdgIiTD~P~~~~~~  225 (226)
T d1o1za_         177 EYAVEVLRSFRKKGIVIFVWTLNDPE--------------IYRKI-RREIDGVITDEVELFVKL  225 (226)
T ss_dssp             HHHHHHHHHHHHTTCEEEEESCCCHH--------------HHHHH-GGGCSEEEESCHHHHHHT
T ss_pred             hhhHHHHHHHHHCCCEEEEECCChHH--------------HHHHH-HcCCCEEEECcHHHHHhc
Confidence            12467999999999999999999874              55675 899999999999998874

>d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Putative glycerophosphodiester phosphodiesterase TTHB141
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.6e-41  Score=335.03  Aligned_cols=214  Identities=16%  Similarity=0.180  Sum_probs=173.9

Q ss_pred             ceEEeccCCCCCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCcccccCccccccccccccccccccccccc
Q 005894          270 PLIITHNGASGVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDLIGKTTAATVFMSKATSVPEIQKERGIFS  349 (671)
Q Consensus       270 p~iIAHRG~s~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L~rtT~~~~~f~~r~~~~~~~~~~~G~~i  349 (671)
                      |+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.++.|+                       .+
T Consensus         1 P~iiaHRG~~~~~pENT~~a~~~a~~~G~~~iE~DV~~TkDg~~vv~HD~~~~r~-----------------------~i   57 (217)
T d1vd6a1           1 PLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTPLG-----------------------PV   57 (217)
T ss_dssp             CEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEETTE-----------------------EG
T ss_pred             CeEEECCCCCCCCCchhHHHHHHHHHcCCCEEEEEEEEecCCCEEEecccccCcc-----------------------cc
Confidence            8999999999999999999999999999999999999999999999999988764                       35


Q ss_pred             ccCCHHHHhccCCCcCCCCCCCCCCCCCCcccccCCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHH
Q 005894          350 FDLTWTEIQSLKPQISSPFDKSNPPIIRNPEAKNKGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTK  429 (671)
Q Consensus       350 ~dlT~~EL~~L~~~~~~~f~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~  429 (671)
                      .++||+||+.+.                       +++|||+|+|++++..+.+.++||+|....       .....+..
T Consensus        58 ~~~~~~el~~~~-----------------------~~iptl~e~l~~~~~~~~~~~~ie~K~~~~-------~~~~~~~~  107 (217)
T d1vd6a1          58 FQVDYADLKAQE-----------------------PDLPRLEEVLALKEAFPQAVFNVELKSFPG-------LGEEAARR  107 (217)
T ss_dssp             GGSCHHHHHHHS-----------------------TTCCBHHHHHGGGGTCTTCEEEEEECCCTT-------SHHHHHHH
T ss_pred             cchhHHHHhhhh-----------------------ccCCCHHHHHHHHHhCCCceeeeeeccCcc-------hhHHHHHH
Confidence            789999998653                       469999999999987655678899986532       12334455


Q ss_pred             HHHhcCCCCCCCceEEEEcCChHHHHHHhcC-CCceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCccccc
Q 005894          430 ALSNATFDKQSTQQVMIQSDDSSVLSKFQDV-PAYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTN  508 (671)
Q Consensus       430 ~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~-p~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~  508 (671)
                      +++.++..    ++++++||++..+.++++. |+++++++.......           +....++  ..+.+..   ...
T Consensus       108 l~~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~-----------~~~~~~~--~~i~~~~---~~~  167 (217)
T d1vd6a1         108 LAALLRGR----EGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHSA-----------LLPCLGV--EAVHPHH---ALV  167 (217)
T ss_dssp             HHHHTTTC----SSEEEEESCHHHHHHHHHHCTTSCEEEEESSCCGG-----------GGGGSCC--SEEEEBG---GGC
T ss_pred             HHHHhhcc----ceEEEeeccHHHHHHHHHHhccCceeeeccccccc-----------hhhhccc--eEEcchH---hHH
Confidence            56666655    6999999999999999998 999999998654221           1122233  3344432   445


Q ss_pred             chHHHHHHHHcCCeEEEEeccCcccccccccCCChHHHHHHHHhhcCccEEEECChhhHHHH
Q 005894          509 ATNILRDLHSANISVYISALRNEYLSIAFDYLADPLIEVATFAQGVGVDGITTEFPATASKY  570 (671)
Q Consensus       509 ~~~~V~~~~~~Gl~V~vwtvn~~~~~~~~d~~~D~~~e~~~~l~~~GVDgIiTD~P~~~~~~  570 (671)
                      ++++|+++|++|+.|++||+|++.             ++++++ ++|||||+||+|+.+.++
T Consensus       168 ~~~~v~~~~~~g~~v~~wTvn~~~-------------~~~~~~-~~gvdgI~TD~P~~l~~l  215 (217)
T d1vd6a1         168 TEEAVAGWRKRGLFVVAWTVNEEG-------------EARRLL-ALGLDGLIGDRPEVLLPL  215 (217)
T ss_dssp             CHHHHHHHHHTTCEEEEECCCCHH-------------HHHHHH-HTTCSEEEESCHHHHTTS
T ss_pred             HHHHHHHHHHCCCEEEEECCCCHH-------------HHHHHH-hCCCCEEEECCHHHHhhc
Confidence            688999999999999999999987             889885 999999999999988653

>d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Glycerophosphodiester phosphodiesterase GlpQ
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=9.9e-30  Score=266.38  Aligned_cols=251  Identities=20%  Similarity=0.254  Sum_probs=180.3

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHcccccccccc----
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVY----   79 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~----   79 (671)
                      +...+..+||||||+||||++||+||.+|+|+||+...++.+..+      ..+|. |.++|++||++++++..+.    
T Consensus        26 A~~~gad~iE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~------~~~~~-v~~~t~~el~~l~~~~~~~~~~~   98 (328)
T d1ydya1          26 AYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK------DGRYY-AIDFTLDEIKSLKFTEGFDIENG   98 (328)
T ss_dssp             HHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT------TSCCB-GGGSCHHHHHHSCBCSCEEEETT
T ss_pred             HHHcCCCEEEEeeeEccCCcEEEECCchhhcccCCCCCccccccc------CCCce-eeecchhhhhccccccccccccc
Confidence            345677899999999999999999999999999997665554432      22455 9999999999999984321    


Q ss_pred             -------CCCccCCCCCCCCChhhhhHHHHH----------------------hcCccHHHHHHHHHHHcC----CceEE
Q 005894           80 -------TRSEAFDNTQPIPTPDTIYDLFYS----------------------QHNISAAKYITEYLQKLI----SNVYY  126 (671)
Q Consensus        80 -------~r~~~f~~~~~IptL~ev~~~~~~----------------------~~~~~~~~~v~~~l~~~~----~~~~~  126 (671)
                             .+...++++++||||+|+++.+..                      +.+..+++.+..++++++    .++++
T Consensus        99 ~~~~~~~~~~~~~~~~~~iptL~~~~~~~~~~~~~~~~~~~~~iEiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  178 (328)
T d1ydya1          99 KKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVY  178 (328)
T ss_dssp             EEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHHHTTCCHHHHHHHHHHHTTCCSTTSSBE
T ss_pred             cccccccccccccCCCcccCcHHHHHHHHHHHhhhcCCCceeeeccCCcchhhhcchhhHHHHHHHHHHhcccCCCceEE
Confidence                   112233467899999999655422                      112467788899998876    35799


Q ss_pred             EeCCChHHHHHhhhhcCCC---CcceEEEecCCCCcC--------CCCCCCHHHHhh--cHHHHHHhhceecCCCcceee
Q 005894          127 ISSPEIGFLKTMDRKVDHN---TTKLVFMVLEPNAVE--------PTTNQTYGSILK--NLTAIKSFASGIVVPKSYIIP  193 (671)
Q Consensus       127 isSf~~~~L~~i~~~~~~~---~~~~v~~~~~~~~~~--------~~~~~~y~~~~~--~l~~i~~~a~~i~~~~~~i~p  193 (671)
                      ++||++..|+.++....|.   ..+++..+......+        ...+..|..+..  .+..++.+++++.+.+.++++
T Consensus       179 ~~SF~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~  258 (328)
T d1ydya1         179 LQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIE  258 (328)
T ss_dssp             EEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHHHHTTTCSEEEEBGGGTBC
T ss_pred             EEecCHHHHHHHHHHcCcccccccceeeeecccccchhccccccccccccchhhhcChhhHHHHHhhCCeeecchhhccc
Confidence            9999999999998644331   133333221111100        111233444433  577888899999999999888


Q ss_pred             cCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCChHHHHHH-HhhcCceeeeeEeecCCCcccccc
Q 005894          194 VNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPEAEYLT-FIDNSQFAVDGFITDFPTTATEAI  267 (671)
Q Consensus       194 ~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~~e~~~-~i~~g~~~Vdgv~td~p~~~~~~i  267 (671)
                      ... .++....+.+|+.||++|++|++||||++..  ++|..|...++.. +.+.|   ||||+||+|..+..++
T Consensus       259 ~~~-~~~~~~~~~~V~~~~~~gl~v~~wTvn~~~~--~~~~~d~~~~~~~~~~~~G---VDgIiTD~P~~~~~~l  327 (328)
T d1ydya1         259 ETS-QPGNIKLTGMVQDAQQNKLVVHPYTVRSDKL--PEYTPDVNQLYDALYNKAG---VNGLFTDFPDKAVKFL  327 (328)
T ss_dssp             TTC-BTTBCCBCSHHHHHHHTTCEECCBCBCTTSC--CTTCSSHHHHHHHHHTTSC---CSEEEESCHHHHHHHH
T ss_pred             ccc-cccccCCHHHHHHHHHCCCEEEEEccCChHH--hhhccCHHHHHHHHHHHcC---CcEEEEcCHHHHHHHh
Confidence            665 4556667899999999999999999999854  4666777666655 44567   9999999999887654

>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Glycerophosphodiester phosphodiesterase UgpQ
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.95  E-value=7.1e-29  Score=249.89  Aligned_cols=199  Identities=13%  Similarity=0.109  Sum_probs=150.4

Q ss_pred             cccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCc
Q 005894            4 SNCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSE   83 (671)
Q Consensus         4 ~~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~   83 (671)
                      +...|..+||||||+||||++||+||.+|+|+||+                  +|. |.|+|++||++++++ +|+.  .
T Consensus        25 A~~~G~~~iE~Dv~~TkDg~~Vv~HD~~l~r~t~~------------------~~~-v~~~t~~el~~l~~~-~~~~--~   82 (240)
T d1zcca1          25 ALQQGADYIELDVRESADGVLYVIHDETLDRTTNG------------------TGP-VGHMLSSEIDTLDAG-GWFD--D   82 (240)
T ss_dssp             HHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSC------------------CSB-STTSCHHHHTTSCSS-TTTC--G
T ss_pred             HHHcCCCEEEEEEEEecCCCEEEeccccccccccc------------------ccc-HHHhhHHHHHHhhcc-CcCc--c
Confidence            34567789999999999999999999999999999                  888 999999999999998 5554  4


Q ss_pred             cCCCCCCCCChhhhhHHHHHhc------CccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceEEEecCC
Q 005894           84 AFDNTQPIPTPDTIYDLFYSQH------NISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEP  156 (671)
Q Consensus        84 ~f~~~~~IptL~ev~~~~~~~~------~~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~  156 (671)
                      .|. +++||||+|+.+.+....      +..-.+.+.+++++++ .++++++||++..++.+++ ..| +.++++.+...
T Consensus        83 ~~~-~~~IptL~evl~~~~~~~~l~iEiK~~~~~~v~~l~~~~~~~~~v~~~Sf~~~~l~~~~~-~~P-~~~~~~~~~~~  159 (240)
T d1zcca1          83 RFK-GAIVPRLDAYLEHLRGRAGVYIELKYCDPAKVAALVRHLGMVRDTFYFSFSEEMRQGLQS-IAP-EFRRMMTLDIA  159 (240)
T ss_dssp             GGT-TCCCCBHHHHHHHHTTTCEEEEEEEESCHHHHHHHHHHHTCSTTEEEECSCHHHHHHHHH-HCT-TSEEEEEHHHH
T ss_pred             ccC-CCcCChHHHhhhcccccceeEEEEccCcchhhhHHHHHHHhhcccccccccHHHHHHHHH-hhh-ccceEEeeccc
Confidence            455 899999999976553332      3344678899999998 6789999999999999995 556 47877643111


Q ss_pred             CCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCC
Q 005894          157 NAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFE  236 (671)
Q Consensus       157 ~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d  236 (671)
                      ..             ..+......+..+......++           ...+|+.+|++|++|++||+||+.         
T Consensus       160 ~~-------------~~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~Gl~v~~wTvnd~~---------  206 (240)
T d1zcca1         160 KS-------------PSLVGAVHHASIIEITPAQMR-----------RPGIIEASRKAGLEIMVYYGGDDM---------  206 (240)
T ss_dssp             SS-------------THHHHHTTCCSEEEECHHHHH-----------SHHHHHHHHHHTCEEEEECCCCCH---------
T ss_pred             cc-------------chhHHHHhcccccccchhhhC-----------CHHHHHHHHHCCCEEEEEccCCHH---------
Confidence            00             012222233444433322221           258999999999999999999873         


Q ss_pred             hHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          237 PEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       237 ~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                        ..++.+++.|   ||||+||+|.....
T Consensus       207 --~~~~~l~~~g---VdgI~TD~P~l~~~  230 (240)
T d1zcca1         207 --AVHREIATSD---VDYINLDRPDLFAA  230 (240)
T ss_dssp             --HHHHHHHHSS---CSEEEESCHHHHHH
T ss_pred             --HHHHHHHHcC---CCEEEeCcHHHHHH
Confidence              2356788889   99999999987654

>d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Hypothetical protein TM1621
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=5.7e-27  Score=233.23  Aligned_cols=188  Identities=19%  Similarity=0.181  Sum_probs=135.5

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA   84 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~   84 (671)
                      ...+..+||||||+||||++||+||.+|+|+||+                  +|. |.++|++||++++           
T Consensus        29 ~~~g~~~iE~Dv~~T~Dg~~Vv~HD~~l~r~t~~------------------~~~-i~~~t~~el~~l~-----------   78 (226)
T d1o1za_          29 IEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGL------------------DVK-IRDATVSELKELT-----------   78 (226)
T ss_dssp             HHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCE------------------EEE-GGGSCHHHHHHHT-----------
T ss_pred             HHcCCCEEEEEEEEccCCCEEeeccceeeeeecc------------------cce-eeecchhhhhhhh-----------
Confidence            3457779999999999999999999999999999                  888 9999999999874           


Q ss_pred             CCCCCCCCChhhhhHHHHHhc-------CccHHHHHHHHHHHcCCceEEEeCCChHHHHHhhhhcCCCCcceEEEecCCC
Q 005894           85 FDNTQPIPTPDTIYDLFYSQH-------NISAAKYITEYLQKLISNVYYISSPEIGFLKTMDRKVDHNTTKLVFMVLEPN  157 (671)
Q Consensus        85 f~~~~~IptL~ev~~~~~~~~-------~~~~~~~v~~~l~~~~~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~~~~~~  157 (671)
                         ..+||||+|+++.+....       ..+..+.++++++++.  +++++||++..|+++..     ..+..+.+....
T Consensus        79 ---~~~iptL~evl~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~--~vi~~SF~~~~l~~~~~-----~~~~~~l~~~~~  148 (226)
T d1o1za_          79 ---DGKITTLKEVFENVSDDKIINIEIKEREAADAVLEISKKRK--NLIFSSFDLDLLDEKFK-----GTKYGYLIDEEN  148 (226)
T ss_dssp             ---TTCCCBHHHHHHHSCTTSEEEEEECCGGGHHHHHHHHTTCC--SEEEEESCHHHHHHHCT-----TSCEEEECCTTT
T ss_pred             ---hhcchhHHHHHHHhhcccccchhhccccccchhhhhhhhcc--ceeccccchHHHHHHHh-----ccceeeEecccc
Confidence               357999999977653322       2467778888888776  89999999999987663     355554332221


Q ss_pred             CcCCCCCCCHHHHhhcHHHHHH-hhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCCCCCC
Q 005894          158 AVEPTTNQTYGSILKNLTAIKS-FASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYSYNFE  236 (671)
Q Consensus       158 ~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d  236 (671)
                            .......   +..+.. .+.++.++...+   ..     ....++|+.+|++|++|++||||++.         
T Consensus       149 ------~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~v~~~~~~g~~v~~wTVN~~~---------  202 (226)
T d1o1za_         149 ------YGSIENF---VERVEKERPYSLHVPYQAF---EL-----EYAVEVLRSFRKKGIVIFVWTLNDPE---------  202 (226)
T ss_dssp             ------TCSHHHH---HHHHHHHCCSEEEEEGGGG---GS-----HHHHHHHHHHHHTTCEEEEESCCCHH---------
T ss_pred             ------cchhHHH---HHhhhhcccccccCchhhh---hh-----hhhHHHHHHHHHCCCEEEEECCChHH---------
Confidence                  1111112   122221 244444443322   10     01247999999999999999998653         


Q ss_pred             hHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          237 PEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       237 ~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                          +.++++.|   ||||+||+|..+..
T Consensus       203 ----~~~~l~~g---VdgIiTD~P~~~~~  224 (226)
T d1o1za_         203 ----IYRKIRRE---IDGVITDEVELFVK  224 (226)
T ss_dssp             ----HHHHHGGG---CSEEEESCHHHHHH
T ss_pred             ----HHHHHHcC---CCEEEECcHHHHHh
Confidence                45678888   99999999976543

>d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Glycerophosphoryl diester phosphodiesterase
domain: Putative glycerophosphodiester phosphodiesterase TTHB141
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=2e-23  Score=205.30  Aligned_cols=178  Identities=14%  Similarity=0.056  Sum_probs=128.3

Q ss_pred             ccCCCeEEEeeceeecCCeEEeecCCcccccccccccccccccccccCCcccccccccccCHHHHccccccccccCCCcc
Q 005894            5 NCLSNAIMLCNLQFSKDGLGVCLSDVRLNNITTINGAFKDQQTTKNINGNNVRGWFSVDYTLEQLGQLYLVQNVYTRSEA   84 (671)
Q Consensus         5 ~~~~~~~iE~DVqlTkDG~~Vv~HD~~LdrtT~~~~~~~~~~~~~~~~g~~~~G~~v~d~T~~EL~~l~~~~~~~~r~~~   84 (671)
                      ...|..+||||||+||||++||+||.+++|++                        +.++|++||+..            
T Consensus        25 ~~~G~~~iE~DV~~TkDg~~vv~HD~~~~r~~------------------------i~~~~~~el~~~------------   68 (217)
T d1vd6a1          25 LEAGLDGVELDVWPTRDGVFAVRHDPDTPLGP------------------------VFQVDYADLKAQ------------   68 (217)
T ss_dssp             HHTTCSEEEEEEEECTTSCEEECSCSEETTEE------------------------GGGSCHHHHHHH------------
T ss_pred             HHcCCCEEEEEEEEecCCCEEEecccccCccc------------------------ccchhHHHHhhh------------
Confidence            34567799999999999999999999998853                        458999999743            


Q ss_pred             CCCCCCCCChhhhhHHHHH--h------cC---ccHHHHHHHHHHHcC-CceEEEeCCChHHHHHhhhhcCCCCcceEEE
Q 005894           85 FDNTQPIPTPDTIYDLFYS--Q------HN---ISAAKYITEYLQKLI-SNVYYISSPEIGFLKTMDRKVDHNTTKLVFM  152 (671)
Q Consensus        85 f~~~~~IptL~ev~~~~~~--~------~~---~~~~~~v~~~l~~~~-~~~~~isSf~~~~L~~i~~~~~~~~~~~v~~  152 (671)
                         .++||||+|+....-.  +      .+   ......+..+++.+. .++++++||++..|+++++ ..| ..++.+.
T Consensus        69 ---~~~iptl~e~l~~~~~~~~~~~~ie~K~~~~~~~~~~~~l~~~~~~~~~v~~~Sf~~~~l~~~~~-~~p-~~~~~~l  143 (217)
T d1vd6a1          69 ---EPDLPRLEEVLALKEAFPQAVFNVELKSFPGLGEEAARRLAALLRGREGVWVSSFDPLALLALRK-AAP-GLPLGFL  143 (217)
T ss_dssp             ---STTCCBHHHHHGGGGTCTTCEEEEEECCCTTSHHHHHHHHHHHTTTCSSEEEEESCHHHHHHHHH-HCT-TSCEEEE
T ss_pred             ---hccCCCHHHHHHHHHhCCCceeeeeeccCcchhHHHHHHHHHHhhccceEEEeeccHHHHHHHHH-Hhc-cCceeee
Confidence               3679999999542211  1      11   123344455555555 5689999999999999995 566 4888875


Q ss_pred             ecCCCCcCCCCCCCHHHHhhcHHHHHHhhceecCCCcceeecCCCCCCcCCCcHHHHHHHHcCCeEEEeeecCCcccCCC
Q 005894          153 VLEPNAVEPTTNQTYGSILKNLTAIKSFASGIVVPKSYIIPVNNKTRYLEPATTLVTDAHNAGLQVYASGFANDIYSSYS  232 (671)
Q Consensus       153 ~~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~i~p~~~~~~y~~~~~~~V~~ah~~Gl~V~~wtv~~~~~~~~~  232 (671)
                      ....          +...++.     ..++++.+....+            ..++|+.+|++|++|++||||++..    
T Consensus       144 ~~~~----------~~~~~~~-----~~~~~i~~~~~~~------------~~~~v~~~~~~g~~v~~wTvn~~~~----  192 (217)
T d1vd6a1         144 MAED----------HSALLPC-----LGVEAVHPHHALV------------TEEAVAGWRKRGLFVVAWTVNEEGE----  192 (217)
T ss_dssp             ESSC----------CGGGGGG-----SCCSEEEEBGGGC------------CHHHHHHHHHTTCEEEEECCCCHHH----
T ss_pred             cccc----------ccchhhh-----ccceEEcchHhHH------------HHHHHHHHHHCCCEEEEECCCCHHH----
Confidence            3221          1111110     1245555544433            2589999999999999999998754    


Q ss_pred             CCCChHHHHHHHhhcCceeeeeEeecCCCcccc
Q 005894          233 YNFEPEAEYLTFIDNSQFAVDGFITDFPTTATE  265 (671)
Q Consensus       233 ~~~d~~~e~~~~i~~g~~~Vdgv~td~p~~~~~  265 (671)
                              ++++++.|   ||||+||+|.....
T Consensus       193 --------~~~~~~~g---vdgI~TD~P~~l~~  214 (217)
T d1vd6a1         193 --------ARRLLALG---LDGLIGDRPEVLLP  214 (217)
T ss_dssp             --------HHHHHHTT---CSEEEESCHHHHTT
T ss_pred             --------HHHHHhCC---CCEEEECCHHHHhh
Confidence                    88999999   99999999988665

>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Mammalian PLC
domain: Phospholipase C isozyme D1 (PLC-D1)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.70  E-value=0.0097  Score=59.92  Aligned_cols=50  Identities=12%  Similarity=0.082  Sum_probs=42.6

Q ss_pred             EEeccCCC---CCCCchhHHHHHHHHHCCCCeEEeceeEccCCeEEEecCCCc
Q 005894          272 IITHNGAS---GVYAGCTDLAYQQAVDDGADIIDCTVQMSKEGVAFCLESPDL  321 (671)
Q Consensus       272 iIAHRG~s---~~~PENTl~Af~~Ai~~GaD~IE~DVqlTkDGv~Vv~HD~~L  321 (671)
                      --+|+-+-   -.+-..+..||..|++.||..||+||+--.||+|||.|..++
T Consensus        10 ~SShNtyl~g~Ql~~~ss~~~~~~~l~~G~R~ielD~w~g~d~ePvV~HG~t~   62 (327)
T d1qasa3          10 SSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTF   62 (327)
T ss_dssp             EEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEESCTTSC
T ss_pred             eccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCeEEeeCCcc
Confidence            45788654   235578899999999999999999999989999999998765

>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Mammalian PLC
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.90  E-value=0.032  Score=56.42  Aligned_cols=48  Identities=10%  Similarity=0.095  Sum_probs=39.7

Q ss_pred             eccCCC-C--CCCchhHHHHHHHHHCCCCeEEeceeE--ccCCeEEEecCCCc
Q 005894          274 THNGAS-G--VYAGCTDLAYQQAVDDGADIIDCTVQM--SKEGVAFCLESPDL  321 (671)
Q Consensus       274 AHRG~s-~--~~PENTl~Af~~Ai~~GaD~IE~DVql--TkDGv~Vv~HD~~L  321 (671)
                      +|+-+- |  .+-..++.||..|+..||..||+||+=  ++||+|||.|..++
T Consensus        15 ShNtyl~g~q~~~~~s~~~~~~~l~~G~R~~eldi~dG~~~d~~Pvv~hg~t~   67 (349)
T d2zkmx4          15 SHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTM   67 (349)
T ss_dssp             BSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSS
T ss_pred             cccccccCCcCCCcccHHHHHHHHHhCCcEEEEEecCCCCCCCCcEEeeCCee
Confidence            677543 2  345778999999999999999999994  57999999998766

>d1vkfa_ c.1.29.1 (A:) Glycerol uptake operon antiterminator-related protein TM1436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: GlpP-like
family: GlpP-like
domain: Glycerol uptake operon antiterminator-related protein TM1436
species: Thermotoga maritima [TaxId: 2336]

Probab=84.12  E-value=3.9  Score=35.96  Aligned_cols=141  Identities=18%  Similarity=0.171  Sum_probs=96.9

Q ss_pred             CCcccCHHHHHHHHhccCcccEEEEecCchhhhhhcCCcHHHHHHHHHHhcCCCCCCCceEEEEcCChHHHHHHhcC--C
Q 005894          384 KGKFVTLDGFLEFAKTKAVSGVLININNAAYLASKKGLGVVDAVTKALSNATFDKQSTQQVMIQSDDSSVLSKFQDV--P  461 (671)
Q Consensus       384 ~~~ipTLeEvL~~~~~~~~~~i~IeIK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~vii~Sfd~~~L~~lk~~--p  461 (671)
                      .+.|..|.++.+.+++.+. .+++.++--      .|+.--+..++.|++++.+       =|.|..+..+++.|+.  .
T Consensus        27 ~g~I~~l~~~v~~~k~~gK-~v~VHiDLi------~GL~~d~~av~flk~~~~d-------GIISTk~~~i~~Ak~~Gl~   92 (172)
T d1vkfa_          27 KSDILNLKFHLKILKDRGK-TVFVDMDFV------NGLGEGEEAILFVKKAGAD-------GIITIKPKNYVVAKKNGIP   92 (172)
T ss_dssp             CEETTTHHHHHHHHHHTTC-EEEEEGGGE------ETCCSSHHHHHHHHHHTCS-------EEEESCHHHHHHHHHTTCC
T ss_pred             cCcHHHHHHHHHHHHHcCC-EEEEEeeec------CCCCCCHHHHHHHHHcCCC-------EEEECCHHHHHHHHHcCCe
Confidence            4679999999999998753 577887743      2333335566777776533       2456789999999998  7


Q ss_pred             CceEEEEeecccCCCChhHHHHHHHHHHHhcCCceeeecCCCcccccchHHHHHHHHcCCeEEEEec-cCcccccccccC
Q 005894          462 AYKKVLHIRKEVSAAPREVVEEIKKYASAVTVTRTSVISTTESFTTNATNILRDLHSANISVYISAL-RNEYLSIAFDYL  540 (671)
Q Consensus       462 ~~~~~~l~~~~~~d~~~~~l~~i~~~a~~v~~~~~~v~~~~~~~~~~~~~~V~~~~~~Gl~V~vwtv-n~~~~~~~~d~~  540 (671)
                      .++++|++++       ..++...+.+....++.-.+.|..     ..+.++++..  +.++.+-++ ++++        
T Consensus        93 tIqR~FliDS-------~al~~~~~~i~~~~PD~IEiLPG~-----i~p~ii~~~~--~~piIAGGLI~~~e--------  150 (172)
T d1vkfa_          93 AVLRFFALDS-------KAVERGIEQIETLGVDVVEVLPGA-----VAPKVARKIP--GRTVIAAGLVETEE--------  150 (172)
T ss_dssp             EEEEEECCSH-------HHHHHHHHHHHHHTCSEEEEESGG-----GHHHHHTTST--TSEEEEESCCCSHH--------
T ss_pred             EEEEEEeeeh-------HHHHHHHHHHhhcCCCEEEECCch-----hhHHHHHHhc--CCCEEeeCCcCCHH--------
Confidence            7899998754       356666666777777766677741     1345665543  568888765 4444        


Q ss_pred             CChHHHHHHHHhhcCccEEEECChhhH
Q 005894          541 ADPLIEVATFAQGVGVDGITTEFPATA  567 (671)
Q Consensus       541 ~D~~~e~~~~l~~~GVDgIiTD~P~~~  567 (671)
                           ++...+ +.|. +|.|-..+..
T Consensus       151 -----dv~~al-~~g~-aVSTS~~~LW  170 (172)
T d1vkfa_         151 -----EAREIL-KHVS-AISTSSRILW  170 (172)
T ss_dssp             -----HHHHHT-TTSS-EEEECCHHHH
T ss_pred             -----HHHHHH-hcCe-EEECCChHHh
Confidence                 777776 5564 9999887653

>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Archaeal fructose 1,6-bisphosphate aldolase
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=80.26  E-value=1.7  Score=41.00  Aligned_cols=92  Identities=12%  Similarity=0.079  Sum_probs=62.8

Q ss_pred             cHHHHHHHHcCCeEEEeeecCCcccCCCCCCChH---HHHHHHhhcCceeeeeEeecCCCccccc-------cCCceEEe
Q 005894          205 TTLVTDAHNAGLQVYASGFANDIYSSYSYNFEPE---AEYLTFIDNSQFAVDGFITDFPTTATEA-------IDRPLIIT  274 (671)
Q Consensus       205 ~~~V~~ah~~Gl~V~~wtv~~~~~~~~~~~~d~~---~e~~~~i~~g~~~Vdgv~td~p~~~~~~-------i~~p~iIA  274 (671)
                      ..++++||+.|+.+.+|.+--....  ....+|.   ...+...+.|   +|-+-+.||......       -..|.+++
T Consensus       126 ~~v~~e~~~~glP~v~e~~p~g~~~--~~~~~~~~v~~aaria~ElG---aDivK~~~p~~~~~~~~~v~~a~~~pv~~~  200 (251)
T d1ojxa_         126 ARIKRDAVKFDLPLVVWSYPRGGKV--VNETAPEIVAYAARIALELG---ADAMKIKYTGDPKTFSWAVKVAGKVPVLMS  200 (251)
T ss_dssp             HHHHHHHHHHTCCEEEEECCCSTTC--CCTTCHHHHHHHHHHHHHHT---CSEEEECCCSSHHHHHHHHHHTTTSCEEEE
T ss_pred             HHHHHHHHHcCCeEEEEEeecCCcc--ccCCCHHHHHHHHHHHHHhC---CCEEEecCCCcHHHHHHHHHhcCCCceEEe
Confidence            4789999999999999988533211  2223332   2244556677   999999999875532       12454443


Q ss_pred             ccCCCCCCCchhHHHHHHHHHCCCCeEE
Q 005894          275 HNGASGVYAGCTDLAYQQAVDDGADIID  302 (671)
Q Consensus       275 HRG~s~~~PENTl~Af~~Ai~~GaD~IE  302 (671)
                       -|..+.-++=++...+.|++.||.++=
T Consensus       201 -gG~~~~~~~~~l~~~~~a~~~Ga~G~~  227 (251)
T d1ojxa_         201 -GGPKTKTEEDFLKQVEGVLEAGALGIA  227 (251)
T ss_dssp             -CCSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             -CCCCCCCHHHHHHHHHHHHHCCCcEEe
Confidence             334455678899999999999998764