Citrus Sinensis ID: 005962

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------
MSIFRNQHDDYLSPIITNKKRLITSIKQYFPFSSFDHNVDLSLCTFPIADPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHcccccHHHHHHccccccccccccccccccHHcccccEEEEccEEEEEEccccccEEEEEEEEcccccccccccEEEcccccccccHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHccccccccHHHcccccHHHHHccHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccEEcccccccccccccccccccHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccccccccccccccccc
ccccccccccccccccccccccEEcccccccccccccccccccccccccccccEcccccccccHHHccccccHHHcHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHcccccccccHHHHHHHcccccccHHHHcEccccccEEccccHHHcccccHHHcHHHHHHHHHHcccccccEEccccccccccccccccccccccccHHHccccccccHHHHHHHcccEEEEEcHHHHHHHHHHHHccccccccEEEEEEEEcccccEEEEEEEEcccccHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHHHccccHHHHcHHHHHHHcccEEEcccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHcccHHHcccccccccccHHHHHHHHHHHHHHHcHHHHHHHccHHHHHcccccccccEcccccccccccHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHHHHccEcccccEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccccccEccccccEccccc
msifrnqhddylspiitNKKRLITSIKqyfpfssfdhnvdlslctfpiadpasesrtlinyvprdeaFSEIKQLQFSAKTLYSVLHGLvpsletaiidtdlgfpyFTTIDKLFnegvnvpmpetfkEKALWRTILPRLVKGIEDTGKevlrfetpetmdrdkffwfrdeefgrqtlaglnpysirlvtewplrstldpeiygppesaITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELkgttlygsrtlffsypsgtlrplaieltrppmdgkpqwkqvftpswhstECWLWRLAKAHVLAHDSGYHQLVSHWLrthcctepyiiATNRQlsamhpinrllqphfryTMEINALAREALVNAggiiestfspgkysmeLSSVAYdkhwrfdhealpkdlisrgmavedpsaprgikltiedypfakdGLDLWDALKQWVTDFVnhyypnpssvesdeELRSWWTEIRTvghadkkdepwwpvlktpedLIDIITTIAWVASGHHAavnfgqytfggyfpnrptvartkmpiedpsdedWKLFLekpedvllqcfpsqiQATTVMAILDTlsshspdeeylgkqmeqawgddpVIKAAFERFSGRLKELEGIIDErnanenlknrtgagmvpyelmkpfsepgvtgqgvpysisi
msifrnqhddylspiitNKKRLITSIKQYFPFSSFDHNVDLSLCTFPIADPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRlvkgiedtgkevlrfetpetmdrdkFFWFRDEEFgrqtlaglnpysIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTlffsypsgtlrPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPnpssvesdeeLRSWWTEIRTvghadkkdepwwpvLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELegiidernanenlknrtgAGMVPYELMKpfsepgvtgqgVPYSISI
MSIFRNQHDDYLSPIITNKKRLITSIKQYFPFSSFDHNVDLSLCTFPIADPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI
*********DYLSPIITNKKRLITSIKQYFPFSSFDHNVDLSLCTFPIADPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAV*****PRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPN********ELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVAR***********DWKLFLEKPEDVLLQCFPSQIQATTVMAILDTL***************QAWGDDPVIKAAFERFSGRLKELEGII******************************************
*SIFRNQHDDYLSPIITNKKRLITSIKQYFPFSSFDHNVDLSL***************INYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRP*****PQW*QVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERN*******RTGAGMVPYELMKPFSEPGVTGQGVPYSISI
********DDYLSPIITNKKRLITSIKQYFPFSSFDHNVDLSLCTFPIADPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNP********LRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI
*****NQHDDYLSPIITNKKRLITSIKQYFPFSSFDHN**************S*SRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSIS*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSIFRNQHDDYLSPIITNKKRLITSIKQYFPFSSFDHNVDLSLCTFPIADPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query667 2.2.26 [Sep-21-2011]
O24370899 Linoleate 13S-lipoxygenas N/A no 0.923 0.685 0.717 0.0
P38418896 Lipoxygenase 2, chloropla yes no 0.917 0.683 0.631 0.0
Q8GSM2896 Lipoxygenase 2.3, chlorop N/A no 0.922 0.686 0.615 0.0
Q84YK8941 Probable lipoxygenase 8, no no 0.922 0.653 0.611 0.0
P38419924 Lipoxygenase 7, chloropla no no 0.922 0.665 0.603 0.0
P93184936 Lipoxygenase 2.1, chlorop N/A no 0.920 0.655 0.572 0.0
Q8GSM3932 Lipoxygenase 2.2, chlorop N/A no 0.917 0.656 0.544 0.0
Q9CAG3917 Lipoxygenase 6, choloropl no no 0.919 0.668 0.509 0.0
O24371914 Linoleate 13S-lipoxygenas N/A no 0.898 0.655 0.511 0.0
Q9LNR3919 Lipoxygenase 3, chloropla no no 0.919 0.667 0.484 1e-178
>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 Back     alignment and function desciption
 Score =  960 bits (2481), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/619 (71%), Positives = 527/619 (85%), Gaps = 3/619 (0%)

Query: 50  DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTI 109
           DP SE+R+   YVPRDEAFSE+K + FS  T+YSVLH +VP+LE+ + D +LGFP+F  I
Sbjct: 283 DPLSETRSTFVYVPRDEAFSEVKSVAFSGNTVYSVLHAVVPALESVVTDPNLGFPHFPAI 342

Query: 110 DKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDE 169
           D LFN GV+  +P    +K+    ++PRL+K I DT K+VL FE+P+ + RDKF WFRD 
Sbjct: 343 DSLFNVGVD--LPGLGDKKSGLFNVVPRLIKAISDTRKDVLLFESPQLVQRDKFSWFRDV 400

Query: 170 EFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQ 229
           EF RQTLAGLNPYSIRLVTEWPLRS LDP++YGPPES ITKELIEKEIG  MTVE+A++Q
Sbjct: 401 EFARQTLAGLNPYSIRLVTEWPLRSKLDPKVYGPPESEITKELIEKEIGNYMTVEQAVQQ 460

Query: 230 KKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQW 289
           KKLFILDYHDLLLPYV KV ELKG+ LYGSRT+FF  P GTL+PLAIELTRPP+D KPQW
Sbjct: 461 KKLFILDYHDLLLPYVNKVNELKGSMLYGSRTIFFLTPQGTLKPLAIELTRPPVDDKPQW 520

Query: 290 KQVFTPS-WHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMH 348
           K+V++P+ W++T  WLW+LAKAHVL+HDSGYHQLVSHWLRTHCCTEPYIIA+NRQLSAMH
Sbjct: 521 KEVYSPNDWNATGAWLWKLAKAHVLSHDSGYHQLVSHWLRTHCCTEPYIIASNRQLSAMH 580

Query: 349 PINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEAL 408
           PI RLL PHFRYTMEINALAREAL+NA G+IES+F PGKY++ELSS+AY   WRFD EAL
Sbjct: 581 PIYRLLHPHFRYTMEINALAREALINANGVIESSFFPGKYAIELSSIAYGAEWRFDQEAL 640

Query: 409 PKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVES 468
           P++LISRG+AVEDP+ P G+KL IEDYPFA DGL LWD LKQWVT++VNHYYP  + +ES
Sbjct: 641 PQNLISRGLAVEDPNEPHGLKLAIEDYPFANDGLVLWDILKQWVTNYVNHYYPQTNLIES 700

Query: 469 DEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFG 528
           D+EL++WW+EI+ VGH DK+DEPWWP LKTP DLI IITTI WV SGHHAAVNFGQY++ 
Sbjct: 701 DKELQAWWSEIKNVGHGDKRDEPWWPELKTPNDLIGIITTIVWVTSGHHAAVNFGQYSYA 760

Query: 529 GYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSP 588
           GYFPNRPTVAR+KMP EDP+ E+W+ F+ KPE+ LL+CFPSQIQAT VMAILD LS+HSP
Sbjct: 761 GYFPNRPTVARSKMPTEDPTAEEWEWFMNKPEEALLRCFPSQIQATKVMAILDVLSNHSP 820

Query: 589 DEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELM 648
           DEEY+G+++E  W +DPVI AAFE FSG+LKELEGIID RN +  L NR GAG++PYEL+
Sbjct: 821 DEEYIGEKIEPYWAEDPVINAAFEVFSGKLKELEGIIDARNNDSKLSNRNGAGVMPYELL 880

Query: 649 KPFSEPGVTGQGVPYSISI 667
           KP+SEPGVTG+GVPYSISI
Sbjct: 881 KPYSEPGVTGKGVPYSISI 899
Plant lipoxygenase involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence. May not be involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. Has also some activity with phosphatidylglycerol, but not with galactolipids.
Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2
>sp|P38418|LOX2_ARATH Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 Back     alignment and function description
>sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 Back     alignment and function description
>sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 Back     alignment and function description
>sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1 Back     alignment and function description
>sp|Q9CAG3|LOX6_ARATH Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1 Back     alignment and function description
>sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query667
213876486 900 lipoxygenase [Camellia sinensis] 0.922 0.683 0.768 0.0
308943877 901 lipoxygenase [Camellia sinensis] 0.922 0.682 0.755 0.0
229554825 901 lipoxygenase [Camellia sinensis] 0.922 0.682 0.754 0.0
71999171 903 lipoxygenase LOX2 [Populus deltoides] 0.920 0.679 0.754 0.0
224053392 897 predicted protein [Populus trichocarpa] 0.920 0.684 0.754 0.0
255544764 900 lipoxygenase, putative [Ricinus communis 0.920 0.682 0.750 0.0
255544760 789 lipoxygenase, putative [Ricinus communis 0.922 0.779 0.754 0.0
225450227 903 PREDICTED: linoleate 13S-lipoxygenase 2- 0.919 0.678 0.754 0.0
71999169 898 lipoxygenase LOX1 [Populus deltoides] 0.923 0.685 0.736 0.0
326418056 898 putative 13-lipoxygenase [Capsicum annuu 0.923 0.685 0.745 0.0
>gi|213876486|gb|ACJ54281.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
 Score = 1012 bits (2616), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/618 (76%), Positives = 544/618 (88%), Gaps = 3/618 (0%)

Query: 50  DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTI 109
           DP SESR+   YVPRDE FSE+KQL FSAKT+YSVLH LVPSL+TAI+DTDLGFPYFT I
Sbjct: 286 DPLSESRSSTVYVPRDEKFSEVKQLTFSAKTVYSVLHALVPSLQTAIVDTDLGFPYFTAI 345

Query: 110 DKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDE 169
           D LFNEGVN+P     + K     +LPRLVK I DT + +LRFETP  +++DKF WFRDE
Sbjct: 346 DSLFNEGVNLP---PLQNKGFLTDLLPRLVKFISDTEEAILRFETPALVEKDKFSWFRDE 402

Query: 170 EFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQ 229
           EF RQTLAGLNPYSI+LV EWPLRS LDP+IYG PESAITK+LIE+EI G++T+EEA++Q
Sbjct: 403 EFSRQTLAGLNPYSIQLVKEWPLRSKLDPKIYGAPESAITKDLIEREIKGMITLEEALQQ 462

Query: 230 KKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQW 289
           KKLF+LDYHDLLLPYV+KVRE++GTTLYGSRTLFF  P+GTLRPLAIELTRPPMDGK +W
Sbjct: 463 KKLFMLDYHDLLLPYVKKVREIEGTTLYGSRTLFFLTPNGTLRPLAIELTRPPMDGKAEW 522

Query: 290 KQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHP 349
           KQVFTP+W +T CWLWRLAK HVLAHDSGYHQLVSHWLRTHC TEPYIIA+NRQLSAMHP
Sbjct: 523 KQVFTPTWDATGCWLWRLAKTHVLAHDSGYHQLVSHWLRTHCATEPYIIASNRQLSAMHP 582

Query: 350 INRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALP 409
           I RLL PHFRYTMEINALAREAL+NA GIIE++FSP KYSMELSSVAYD+ WRFDH+ALP
Sbjct: 583 IYRLLHPHFRYTMEINALAREALINAKGIIETSFSPAKYSMELSSVAYDQQWRFDHQALP 642

Query: 410 KDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESD 469
            DLISRGMAVEDP++P G+KLTIEDYPFA DGL LWDA+KQWVTD+V HYYP+PS ++SD
Sbjct: 643 ADLISRGMAVEDPTSPHGLKLTIEDYPFANDGLVLWDAIKQWVTDYVKHYYPDPSFIKSD 702

Query: 470 EELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGG 529
           EEL+SWWTEIRTVGH DKKD+PWWPVLKTPEDLI I+TT+ WVASGHH+AVNFGQY F G
Sbjct: 703 EELQSWWTEIRTVGHQDKKDDPWWPVLKTPEDLIGILTTMIWVASGHHSAVNFGQYAFAG 762

Query: 530 YFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPD 589
           YFPNRPT+AR K+P EDPS+++ K FL KPE  LL  FPSQIQAT VMA+LD LS+HS D
Sbjct: 763 YFPNRPTIARRKIPTEDPSEQELKNFLNKPEVELLMSFPSQIQATIVMAVLDVLSNHSVD 822

Query: 590 EEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMK 649
           EEY+GK+ME  W ++PV+KAAFER +G+LKELEG+ID+RNAN +LKNR GAG+VPYEL+K
Sbjct: 823 EEYIGKEMEPTWTENPVVKAAFERLNGKLKELEGVIDDRNANLSLKNRVGAGVVPYELLK 882

Query: 650 PFSEPGVTGQGVPYSISI 667
           PFSEPGVTG+GVP SISI
Sbjct: 883 PFSEPGVTGKGVPKSISI 900

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|308943877|gb|ADO51752.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|229554825|gb|ACQ76787.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|71999171|gb|AAZ57445.1| lipoxygenase LOX2 [Populus deltoides] Back     alignment and taxonomy information
>gi|224053392|ref|XP_002297796.1| predicted protein [Populus trichocarpa] gi|222845054|gb|EEE82601.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255544764|ref|XP_002513443.1| lipoxygenase, putative [Ricinus communis] gi|223547351|gb|EEF48846.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255544760|ref|XP_002513441.1| lipoxygenase, putative [Ricinus communis] gi|223547349|gb|EEF48844.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225450227|ref|XP_002263854.1| PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|71999169|gb|AAZ57444.1| lipoxygenase LOX1 [Populus deltoides] Back     alignment and taxonomy information
>gi|326418056|gb|ADZ73653.1| putative 13-lipoxygenase [Capsicum annuum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query667
TAIR|locus:2096915896 LOX2 "lipoxygenase 2" [Arabido 0.917 0.683 0.631 2.9e-222
UNIPROTKB|P38419924 CM-LOX1 "Lipoxygenase 7, chlor 0.922 0.665 0.605 1.7e-210
TAIR|locus:2008808917 LOX6 "lipoxygenase 6" [Arabido 0.919 0.668 0.512 1.3e-171
TAIR|locus:2030215926 LOX4 "lipoxygenase 4" [Arabido 0.916 0.659 0.491 1.1e-165
TAIR|locus:2018848919 LOX3 "lipoxygenase 3" [Arabido 0.919 0.667 0.484 6.2e-165
TAIR|locus:2011030859 LOX1 "lipoxygenase 1" [Arabido 0.913 0.708 0.469 4.2e-150
TAIR|locus:2087837886 LOX5 [Arabidopsis thaliana (ta 0.913 0.687 0.449 2.9e-142
UNIPROTKB|P29250870 LOX1.1 "Linoleate 9S-lipoxygen 0.917 0.703 0.420 6.9e-134
UNIPROTKB|H9L001681 Gga.6903 "Uncharacterized prot 0.547 0.535 0.321 1.3e-41
UNIPROTKB|Q9BYJ1711 ALOXE3 "Epidermis-type lipoxyg 0.466 0.437 0.308 2.9e-41
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2146 (760.5 bits), Expect = 2.9e-222, P = 2.9e-222
 Identities = 391/619 (63%), Positives = 471/619 (76%)

Query:    50 DPASESRTLIN-YVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTT 108
             DP+SE R     YVPRDE FS  K   F+ K + + L  + P +E+ ++     FP+F  
Sbjct:   284 DPSSEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQEPFPHFKA 343

Query:   109 IDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRD 168
             I  LF EG+ +P     K+  L   +LPR++K + +   ++L+F+ P  ++RD+F W RD
Sbjct:   344 IQNLFEEGIQLP-----KDAGLL-PLLPRIIKALGEAQDDILQFDAPVLINRDRFSWLRD 397

Query:   169 EEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIK 228
             +EF RQTLAGLNPYSI+LV EWPL S LDP +YG P S IT E++E+E+ G MTV+EA+K
Sbjct:   398 DEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIVEREVKGNMTVDEALK 457

Query:   229 QKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQ 288
              K+LF+LDYHDLLLPYV KVREL  TTLY SRTLFF     TLRP+AIELT PP   KPQ
Sbjct:   458 NKRLFVLDYHDLLLPYVNKVRELNNTTLYASRTLFFLSDDSTLRPVAIELTCPPNINKPQ 517

Query:   289 WKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMH 348
             WKQVFTP + +T CWLW LAK H ++HD+GYHQL+SHWLRTH CTEPYIIA NRQLSAMH
Sbjct:   518 WKQVFTPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYIIAANRQLSAMH 577

Query:   349 PINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEAL 408
             PI RLL PHFRYTMEINA AR++LVN GGIIE+ F PGKY++ELSS  Y K WRFD E L
Sbjct:   578 PIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLWRFDQEGL 637

Query:   409 PKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVES 468
             P DLI RG+A ED +A  G++LTI DYPFA DGL LWDA+K+WVTD+V HYYP+   + S
Sbjct:   638 PADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYPDEELITS 697

Query:   469 DEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFG 528
             DEEL+ WW+E+R +GH DKKDEPWWPVLKT +DLI ++TTIAWV SGHHAAVNFGQY +G
Sbjct:   698 DEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYG 757

Query:   529 GYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSP 588
             GYFPNRPT  R +MP EDP+DE  K F E PE VLL+ +PSQ QAT VM  LD LS+HSP
Sbjct:   758 GYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPSQKQATLVMVTLDLLSTHSP 817

Query:   589 DEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELM 648
             DEEY+G+Q E +W ++PVI AAFERF G+L+ LEG+IDERN N  LKNR GAG+V YEL+
Sbjct:   818 DEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELL 877

Query:   649 KPFSEPGVTGQGVPYSISI 667
             KP SE GVTG GVPYSISI
Sbjct:   878 KPTSEHGVTGMGVPYSISI 896
GO:0009507 "chloroplast" evidence=ISM;ISS;IDA;TAS
GO:0005515 "protein binding" evidence=IPI
GO:0005737 "cytoplasm" evidence=IDA
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0080027 "response to herbivore" evidence=IEP
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009617 "response to bacterium" evidence=IEP
GO:0016165 "lipoxygenase activity" evidence=IMP;IDA
GO:0009620 "response to fungus" evidence=IEP
GO:0034440 "lipid oxidation" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0006816 "calcium ion transport" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009269 "response to desiccation" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=IMP;RCA;TAS
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
GO:0009414 "response to water deprivation" evidence=TAS
GO:0051707 "response to other organism" evidence=TAS
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|H9L001 Gga.6903 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BYJ1 ALOXE3 "Epidermis-type lipoxygenase 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P38418LOX2_ARATH1, ., 1, 3, ., 1, 1, ., 1, 20.63160.91750.6830yesno
O24370LOX21_SOLTU1, ., 1, 3, ., 1, 1, ., 1, 20.71720.92350.6852N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.110.691
3rd Layer1.13.11.120.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query667
pfam00305667 pfam00305, Lipoxygenase, Lipoxygenase 0.0
PLN02305918 PLN02305, PLN02305, lipoxygenase 0.0
PLN02264919 PLN02264, PLN02264, lipoxygenase 0.0
PLN02337866 PLN02337, PLN02337, lipoxygenase 0.0
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information 
 Score =  802 bits (2073), Expect = 0.0
 Identities = 298/603 (49%), Positives = 395/603 (65%), Gaps = 10/603 (1%)

Query: 50  DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTI 109
           DP SESR+   Y+PRDE F  +K   F    L SVL  +VP+ E+ +  T   F  F  +
Sbjct: 74  DPKSESRSGDVYLPRDERFGHLKSSDFLTYALKSVLQLVVPAFESVLNSTPSEFNSFEDV 133

Query: 110 DKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDT-GKEVLRFETPETMDRDKFFWFRD 168
            KLF  G+ +P         L +     ++K I  T G+++L+F  P+ ++R K  W  D
Sbjct: 134 RKLFEGGIKLPT------DVLSKISPLPVLKEIFRTDGEQILKFPPPKVIERVKSAWMTD 187

Query: 169 EEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIK 228
           EEF R+ LAG NP  IR +TE+P +S LDP +YG   S ITKE +E ++ G +TVEEA++
Sbjct: 188 EEFAREMLAGANPVVIRRLTEFPPKSKLDPAVYGDQTSPITKEHLEAQLEG-LTVEEALQ 246

Query: 229 QKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQ 288
             +LFILD+HDL  PY+ K+     T LY  RTL F    GTL+PLAIEL+ P  DG   
Sbjct: 247 NGRLFILDFHDLDGPYLNKINCTT-TKLYAPRTLLFLQDDGTLKPLAIELSLPHPDGDGA 305

Query: 289 WKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMH 348
             QVF PS    E  +W LAKA V  +DSGYHQL+SHWL TH   EP++IATNRQLS +H
Sbjct: 306 VSQVFLPSDDGVESSIWLLAKAWVRVNDSGYHQLISHWLNTHAVAEPFVIATNRQLSVLH 365

Query: 349 PINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEAL 408
           PI +LL PH+RYTM INALAR++L+NAGGI E  FSPGKY +E+SS AY K W F  +AL
Sbjct: 366 PIFKLLVPHYRYTMNINALARQSLINAGGIFEKAFSPGKYGVEMSSAAY-KDWVFTDQAL 424

Query: 409 PKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVES 468
           P DLI RG+AVEDPSAP G++L IEDYP+A DGL++WDA+K WV ++V+ YY    +V+ 
Sbjct: 425 PADLIKRGLAVEDPSAPHGVRLLIEDYPYAVDGLEIWDAIKTWVQEYVSLYYKTDEAVKK 484

Query: 469 DEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFG 528
           D EL++WW E+  VGH DKKDEPWWP L+T E LI+  T I W AS  HAAVNFGQY +G
Sbjct: 485 DPELQAWWKEVVEVGHGDKKDEPWWPKLQTREQLIEFCTIIIWTASALHAAVNFGQYDYG 544

Query: 529 GYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSP 588
           G+ PNRPT +R  MP     +  ++  ++ P+   L+  P ++QA   +++++ LS H+ 
Sbjct: 545 GWIPNRPTTSRRFMPEPGTKEATYEELVKNPDKAYLKTIPPKLQALLDLSVIEILSRHAS 604

Query: 589 DEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELM 648
           DE YLG++ E+ W  D    AAF+RF  +L E+E  I ERN + +LKNR+G   +PY L+
Sbjct: 605 DEVYLGQRDEEHWTSDKEPLAAFKRFGKKLAEIEKKITERNKDLSLKNRSGPVKMPYTLL 664

Query: 649 KPF 651
           KP 
Sbjct: 665 KPS 667

Length = 667
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 667
PLN02305918 lipoxygenase 100.0
PLN02264919 lipoxygenase 100.0
PLN02337866 lipoxygenase 100.0
PF00305667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
>PLN02305 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=1.1e-185  Score=1569.26  Aligned_cols=614  Identities=56%  Similarity=1.006  Sum_probs=584.8

Q ss_pred             CCCCCCCCCCC---CCccCCCCCcchhhhhhhhhhHHHHHHhhhhhhhhhhhccCCCCCCCHHHHHHHhhcCCCCCCchh
Q 005962           48 IADPASESRTL---INYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPET  124 (667)
Q Consensus        48 ~~d~~~e~r~~---~~ylPrDe~F~~~K~~~f~~~~~~~~~~~~~~~l~~~~~~~~~~f~sf~di~~Ly~~~~~~~~~~~  124 (667)
                      +|||+||||..   .+||||||+|++.|.++|.+.++|+++|.++|.++++++.+..+|+||+||++||++|+++|... 
T Consensus       299 ~~Dp~~Esr~~~~~~~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~~-  377 (918)
T PLN02305        299 KKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEE-  377 (918)
T ss_pred             CCCCcccccccCCCCcCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCchh-
Confidence            48999999954   47999999999999999999999999999999999999877899999999999999999998410 


Q ss_pred             hhHHHHHHhhhh-hhhhhccccccccccccCccccccCcccccccHHHHHHHhhCCCccccccccCCCCCCCCCCccCCC
Q 005962          125 FKEKALWRTILP-RLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGP  203 (667)
Q Consensus       125 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~Fg~Q~L~G~NP~~I~~~~~~P~~~~ld~~~yg~  203 (667)
                        .+.+.+..+| .+.+.+.++++.++|||+|+||++|+++|++|+|||||+|||+||++|+||++||++++|||++||+
T Consensus       378 --~~~~~~~p~~~~~~~~i~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~  455 (918)
T PLN02305        378 --PKDIGLNPFLGNFMKQVLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGP  455 (918)
T ss_pred             --hhhhhcCCchHHHHHHhhhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCC
Confidence              0112221122 4455557889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccHHHHHHHhCCcccHHHHHhcCcEEEeccccccchhhhhcccCCCccccccceEEEecCCCceeeEEEEecCCCC
Q 005962          204 PESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPM  283 (667)
Q Consensus       204 ~~~~vt~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~in~~~g~~~yA~~~Lffl~~~g~L~PiAIqL~~~~~  283 (667)
                      ++|+||++||+..|+| +||++||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++
T Consensus       456 ~~s~iT~e~ve~~L~G-~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~  534 (918)
T PLN02305        456 PESALTEELIERELEG-MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPT  534 (918)
T ss_pred             cCCCcCHHHHHhhcCC-CcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCC
Confidence            9999999999999998 999999999999999999999999989999999999999999999999999999999999988


Q ss_pred             CCCCCCCceeeCCCCCCCchhHHHHHHHHHhhhhhhhHHHHhhhhhccchhHHHHHHhccCCccCchhhhcccchhhhhc
Q 005962          284 DGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTME  363 (667)
Q Consensus       284 ~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~tl~  363 (667)
                      ++++..++||||.++++++|.|+||||||++||+++||+++||++||+|||||||||+||||.+|||||||.||||+||+
T Consensus       535 ~~~p~~~~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~  614 (918)
T PLN02305        535 PSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLE  614 (918)
T ss_pred             CCCCCcceeeCCCCCCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHH
Confidence            77666788999977667889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHhhcccCCcccccccCCchhHHHHHHHHHhccCCCCCCCCchHHHhcCCCCCCCCCCccccccccCCccchhhHH
Q 005962          364 INALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLD  443 (667)
Q Consensus       364 IN~~AR~~LI~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~DL~~RG~~~~D~~~~~g~~~~lp~YpYrdDgl~  443 (667)
                      ||++||++||++||++|++|++|+++++|++++|++.|+|++++||+||++|||+++|+++|||+++.|||||||||||+
T Consensus       615 INalAR~~LIn~gGiie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~  694 (918)
T PLN02305        615 INALARQSLINGGGIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLL  694 (918)
T ss_pred             HHHHHHHhccCCCCceeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHH
Confidence            99999999999999999999999999999999999779999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccccccccCcCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCChhHHHHHHhHhhhcccccccccccc
Q 005962          444 LWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFG  523 (667)
Q Consensus       444 iW~aI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~~~t~~~Lv~~lT~iIf~aSaqHAAVNfg  523 (667)
                      ||+||++||++||++||++|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||
T Consensus       695 IW~AIk~wV~~yV~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFg  774 (918)
T PLN02305        695 IWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFG  774 (918)
T ss_pred             HHHHHHHHHHHHHHhhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCcccccCCCCCCCCCCChhHHhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccccCCC--CC
Q 005962          524 QYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQ--AW  601 (667)
Q Consensus       524 Q~~y~gfvPN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~yLG~~~~~--~~  601 (667)
                      ||+|+||+||+|++||+|||++  +..++++|+.+||+++|++||++.||+.+|+++++||+|++||+|||++.+.  .|
T Consensus       775 Qydy~gfvPN~P~~~Rrp~P~~--~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w  852 (918)
T PLN02305        775 QYPFGGYVPNRPTLMRKLIPQE--NDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHW  852 (918)
T ss_pred             CcccccccCCCchhhcCCCCCC--CCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCccccc
Confidence            9999999999999999999987  6678999999999999999999999999999999999999999999999875  69


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcCCceeecCCCCCCCCcCCCCccccC
Q 005962          602 GDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  667 (667)
Q Consensus       602 ~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~~~r~~~~~~PY~yL~Ps~~~g~t~~~IpnSisI  667 (667)
                      +.|+++++|+++|+++|++||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus       853 ~~D~~~~~A~~rF~~~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI  918 (918)
T PLN02305        853 INDHEVVKLFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI  918 (918)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence            999999999999999999999999999999999999999999999999999999999999999998

>PLN02264 lipoxygenase Back     alignment and domain information
>PLN02337 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query667
2iuk_A864 Crystal Structure Of Soybean Lipoxygenase-D Length 1e-152
2iuj_A853 Crystal Structure Of Soybean Lipoxygenase-B Length 1e-151
1ik3_A857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 1e-151
1rov_A857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 1e-149
3pzw_A839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 1e-144
2sbl_B839 The Three-Dimensional Structure Of An Arachidonic A 1e-143
3bnd_A839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 1e-143
3bnb_A839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 1e-143
1fgr_A839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 1e-143
1fgq_A839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 1e-143
3bne_A839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 1e-143
1fgt_A839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 1e-143
1fgm_A839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 1e-143
1fgo_A839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 1e-143
1y4k_A839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 1e-143
3bnc_A839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 1e-143
3v92_B691 S663a Stable-5-Lox Length = 691 1e-46
3o8y_A691 Stable-5-Lipoxygenase Length = 691 1e-46
3v98_A691 S663d Stable-5-Lox Length = 691 1e-46
3vf1_A698 Structure Of A Calcium-Dependent 11r-Lipoxygenase S 7e-46
3dy5_A1066 Allene Oxide Synthase 8r-Lipoxygenase From Plexaura 2e-45
3fg1_A696 Crystal Structure Of Delta413-417:gs Lox Length = 6 2e-45
2fnq_A699 Insights From The X-Ray Crystal Structure Of Coral 3e-45
3fg4_A696 Crystal Structure Of Delta413-417:gs I805a Lox Leng 5e-45
3fg3_A696 Crystal Structure Of Delta413-417:gs I805w Lox Leng 2e-44
3rde_A573 Crystal Structure Of The Catalytic Domain Of Porcin 5e-40
1lox_A662 Rabbit Reticulocyte 15-Lipoxygenase Length = 662 2e-38
2p0m_A662 Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy 3e-38
3d3l_A541 The 2.6 A Crystal Structure Of The Lipoxygenase Dom 5e-36
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure 
Iteration: 1

 Score =  535 bits (1378), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 278/623 (44%), Positives = 388/623 (62%), Gaps = 15/623 (2%)
Query: 50  DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIID---TDLGFPYF 106
           DP SE    + YVPRDE F  +K   F    + S+ H ++P  ++AI     T   F  F
Sbjct: 252 DPNSEKPGEV-YVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESF 310
Query: 107 TTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWF 166
             +  L+  G+ +P      +     + LP L +     G+ VL+F  P      K    
Sbjct: 311 EDVRSLYEGGIKLPT-----DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVM 365
Query: 167 RDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEA 226
            DEEF R+ +AG+NP  IR + E+P +STLDP +YG   S ITKE +E  +GG+ TVEEA
Sbjct: 366 TDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGGV-TVEEA 424
Query: 227 IKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGK 286
           +  ++LFILDY D  +PY+ ++  L     Y +RT+ F    GTL+PLAIEL++P  DG 
Sbjct: 425 LSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGD 484
Query: 287 PQWKQ--VFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 344
               +  V  P+    +  +W LAKAHV+ +DSGYHQLVSHWL TH   EP+ IATNR L
Sbjct: 485 NLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHL 544
Query: 345 SAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFD 404
           S +HPI +LL PH+R T+ IN LAR++L+NA GIIE +F PGKYS+E+SS  Y K+W F 
Sbjct: 545 SVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVY-KNWVFT 603
Query: 405 HEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPS 464
           H+ALP DL+ RG+A+EDPSAP G++L IEDYP+A DGL++WDA+K WV ++V+ YYP  +
Sbjct: 604 HQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDA 663
Query: 465 SVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQ 524
           +V+ D EL++WW E    GH D K++PWWP  +T EDLI   + I W AS  HAAVNFGQ
Sbjct: 664 AVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHAAVNFGQ 723
Query: 525 YTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLS 584
           Y +GG   NRPT+AR  +P E   + D    ++ P+   L+    + +    +++++ LS
Sbjct: 724 YPYGGLILNRPTLARRFIPAEGTPEYDE--MVKNPQKAYLRTITPKFETLIDLSVIEILS 781
Query: 585 SHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVP 644
            H+ DE YLG++    W  D     AF+RF  +L  +EG I+ RN++ +L+NRTG   +P
Sbjct: 782 RHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLP 841
Query: 645 YELMKPFSEPGVTGQGVPYSISI 667
           Y L+   SE G+T +G+P SISI
Sbjct: 842 YTLLHRSSEEGLTFKGIPNSISI 864
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 Back     alignment and structure
>pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 Back     alignment and structure
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 Back     alignment and structure
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 Back     alignment and structure
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 Back     alignment and structure
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 Back     alignment and structure
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 Back     alignment and structure
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 Back     alignment and structure
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query667
1f8n_A839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 0.0
2iuk_A864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 0.0
2iuj_A853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 0.0
3v98_A691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 1e-169
3rde_A573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 1e-165
3dy5_A1066 Allene oxide synthase-lipoxygenase protein; fusion 1e-165
3fg1_A696 Allene oxide synthase-lipoxygenase protein; arichi 1e-163
1lox_A662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 1e-163
3d3l_A541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 1e-159
3vf1_A698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 1e-159
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  660 bits (1704), Expect = 0.0
 Identities = 257/624 (41%), Positives = 378/624 (60%), Gaps = 16/624 (2%)

Query: 49  ADPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAI--IDTDLGFPYF 106
            DP +E +  + YVPRDE    +K          S+   + P+ E+A     T + F  F
Sbjct: 227 TDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSF 286

Query: 107 TTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWF 166
             +  L+  G+ +P     ++       LP + +     G+ +L+F  P  +   +  W 
Sbjct: 287 QDVHDLYEGGIKLP-----RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWM 341

Query: 167 RDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEA 226
            DEEF R+ +AG+NP  IR + E+P +S LDP IYG   S IT + ++ +     T++EA
Sbjct: 342 TDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDG---YTMDEA 398

Query: 227 IKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDG- 285
           +  ++LF+LDYHD+ +PYV ++ +L     Y +RT+ F    GTL+P+AIEL+ P   G 
Sbjct: 399 LGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGD 458

Query: 286 -KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 344
                 QV  P+    E  +W LAKA+V+ +DS YHQL+SHWL TH   EP++IAT+R L
Sbjct: 459 LSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHL 518

Query: 345 SAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFD 404
           S +HPI +LL PH+R  M INALAR++L+NA GIIE+TF P KYS+E+SS  Y K+W F 
Sbjct: 519 SVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY-KNWVFT 577

Query: 405 HEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPS 464
            +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V  YY    
Sbjct: 578 DQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDD 637

Query: 465 SVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQ 524
            V++D EL+ WW E    GH D KD+PWWP L+T EDL+++   I W+AS  HAAVNFGQ
Sbjct: 638 DVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQ 697

Query: 525 YTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLS 584
           Y +GG   NRPT +R  +P  +    +++  +   E   L+   S++     +++++ LS
Sbjct: 698 YPYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILS 755

Query: 585 SHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NRTGAGMV 643
           +H+ DE YLG++    W  D     AF++F  +LKE+E  +  RN + +L+ NR G   +
Sbjct: 756 THASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQL 815

Query: 644 PYELMKPFSEPGVTGQGVPYSISI 667
           PY L+ P SE G+T +G+P SISI
Sbjct: 816 PYTLLYPSSEEGLTFRGIPNSISI 839
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query667
2iuj_A853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 100.0
2iuk_A864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 100.0
1f8n_A839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 100.0
3rde_A573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 100.0
3v98_A691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 100.0
3fg1_A696 Allene oxide synthase-lipoxygenase protein; arichi 100.0
3vf1_A698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 100.0
1lox_A662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 100.0
3dy5_A1066 Allene oxide synthase-lipoxygenase protein; fusion 100.0
3d3l_A541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 100.0
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Back     alignment and structure
Probab=100.00  E-value=1.5e-180  Score=1546.10  Aligned_cols=643  Identities=44%  Similarity=0.808  Sum_probs=605.6

Q ss_pred             ccccccchh-HHHHhh-----------hhcccccCCCC--------CCccccC-C--CC------------CCCCCCCCC
Q 005962           12 LSPIITNKK-RLITSI-----------KQYFPFSSFDH--------NVDLSLC-T--FP------------IADPASESR   56 (667)
Q Consensus        12 ~~~~~~~~~-~~~~~~-----------~~~~~~~~~~~--------~~~~~~~-~--~~------------~~d~~~e~r   56 (667)
                      .++|..+|+ ||+++|           +.|+ |..|++        ...+.|- +  ||            ++||++|+|
T Consensus       169 p~~l~~~R~~EL~~lrg~g~g~rk~~driYd-y~~yndlg~pd~~~~~~rpvlgGs~~Pyprr~rtgr~~~~~d~~~e~~  247 (853)
T 2iuj_A          169 PAPLVKYREEELKNVRGDGTGERKEWDRIYD-YDVYNDLGDPDKGEKYARPVLGGSALPYPRRGRTGRGKTRKDPNSEKP  247 (853)
T ss_dssp             CTTTHHHHHHHHHHHHCCSCSCCCTTCCCCC-EECBCCSCCGGGCTTSCCCCBSSSSSCCCCEECCCCCBCSSCTTSBCC
T ss_pred             CHHHHHHHHHHHHHhcCCCCccccccceeee-ccccccCCCCccCccccCcccCCCCCCCCccccCCCCCccCCcccccc
Confidence            346677787 699999           9999 999999        2223331 2  55            489999999


Q ss_pred             CCCCccCCCCCcchhhhhhhhhhHHHHHHhhhhhhhhhhh--ccCCCCCCCHHHHHHHhhcCCCCCCchhhhHHHHHHhh
Q 005962           57 TLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAI--IDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTI  134 (667)
Q Consensus        57 ~~~~ylPrDe~F~~~K~~~f~~~~~~~~~~~~~~~l~~~~--~~~~~~f~sf~di~~Ly~~~~~~~~~~~~~~~~~~~~~  134 (667)
                      ...+||||||||++.|.++|.+++++++++.++|.+++++  +.+..+|+||+||++||++|+++|.      + .++..
T Consensus       248 ~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~~f~~f~di~~ly~~g~~l~~------~-~~~~~  320 (853)
T 2iuj_A          248 GDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVTLPT------N-FLSNI  320 (853)
T ss_dssp             CSSCCCCGGGSCCCSSGGGCHHHHHHHHHTTHHHHHHHHHHTTSSCSSCCSHHHHHHHHHHCCCCCH------H-HHHHS
T ss_pred             ccCCCCCCccccccchHHHHHHHHHHHHHHHhHHHHHHHhhccCCcCCCCCHHHHHHHHhccccCch------h-hhccc
Confidence            8889999999999999999999999999999999999998  4246799999999999999999882      2 33333


Q ss_pred             hh--hhhhhccccccccccccCccccccCcccccccHHHHHHHhhCCCccccccccCCCCCCCCCCccCCCCCCcccHHH
Q 005962          135 LP--RLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKEL  212 (667)
Q Consensus       135 ~~--~~~~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~Fg~Q~L~G~NP~~I~~~~~~P~~~~ld~~~yg~~~~~vt~~~  212 (667)
                      +|  .+.+.+.+++++++|||.|+++++++++|++|++||||+|||+||++|++|++||++++|||++||+++|+||++|
T Consensus       321 ~p~~~~~~~~~~~~~~~lkfp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ldp~~yg~~~s~it~e~  400 (853)
T 2iuj_A          321 TPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGDHTCIITKEH  400 (853)
T ss_dssp             CCCTTSSTTTTCCSSSCCCCCCCGGGTSCTTTTTSHHHHHHTTTSSSSTTCCEECCSSSCCCCSCTTTTCCCCCCCCTTT
T ss_pred             CcHHHHHHHhhccccccccCCCCceeecchhhhhchHHHHHHHhcCCCchheeeccccCccccCChhhcCCcccccCHHH
Confidence            23  4556667778999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCcccHHHHHhcCcEEEeccccccchhhhhcccCCCccccccceEEEecCCCceeeEEEEecCCCCCCCC--CCC
Q 005962          213 IEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKP--QWK  290 (667)
Q Consensus       213 i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~in~~~g~~~yA~~~Lffl~~~g~L~PiAIqL~~~~~~~~~--~~~  290 (667)
                      |+..++| +||++|+++|||||+||||++|||++++|. ++++.|||+||||++++|+|+||||||+++++++++  +.+
T Consensus       401 i~~~l~g-~tl~~al~~grLFi~Dy~d~~lp~~~~in~-~~~~~yAp~~Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~~  478 (853)
T 2iuj_A          401 LEPNLGG-LTVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRTIFFLKNDGTLTPLAIELSKPHPQGEEYGPVS  478 (853)
T ss_dssp             TSCSSCC-SCHHHHHHTTCEEECCCSTTTGGGHHHHHT-SSCCCCBCCEEEEECTTSCEEEEEEEEEECCTTCGGGCCEE
T ss_pred             HhhccCC-CcHHHHHhcCCEEEecchhhhcchhhccCC-CCcEeecceEEEEECCCCcEeEEEEEeecCCCCCccccCCC
Confidence            9999998 999999999999999999999999999998 788999999999999999999999999998775542  568


Q ss_pred             ceeeCCCCCCCchhHHHHHHHHHhhhhhhhHHHHhhhhhccchhHHHHHHhccCCccCchhhhcccchhhhhcchHHHHh
Q 005962          291 QVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALARE  370 (667)
Q Consensus       291 ~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~tl~IN~~AR~  370 (667)
                      +||||+|+++++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+
T Consensus       479 ~VftP~dd~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~  558 (853)
T 2iuj_A          479 EVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARK  558 (853)
T ss_dssp             EEECCCCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHH
T ss_pred             CeECCCCCCCCccHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCCccCchhhhhhHHHHhHHHHHHHHHH
Confidence            99999986666899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccCCcccccccCCchhHHHHHHHHHhccCCCCCCCCchHHHhcCCCCCCCCCCccccccccCCccchhhHHHHHHHHH
Q 005962          371 ALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQ  450 (667)
Q Consensus       371 ~LI~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~DL~~RG~~~~D~~~~~g~~~~lp~YpYrdDgl~iW~aI~~  450 (667)
                      .||++||++|++|++|+++++|++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||+|||+||+||++
T Consensus       559 ~LI~~gGiie~~~~~G~~~~el~s~~yk~-w~f~~~~LP~DL~~RGv~~~D~~~p~gl~l~i~dYpYadDgL~iW~AI~~  637 (853)
T 2iuj_A          559 SLVNADGIIEKTFLWGRYSLEMSAVIYKD-WVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKS  637 (853)
T ss_dssp             HTSSTTCHHHHHSTTGGGHHHHHHHHHTT-CCSGGGSHHHHHHHHTSEEECTTSTTSEEESSTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCCceeeeccCchhhHHHHHHHHcc-CCCccccCcHHHHhcCCCCCCCCCcccccccccCCCccccHHHHHHHHHH
Confidence            99999999999999999999999999997 99999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccccccccCcCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCChhHHHHHHhHhhhccccccccccccccccccc
Q 005962          451 WVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGY  530 (667)
Q Consensus       451 ~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~~~t~~~Lv~~lT~iIf~aSaqHAAVNfgQ~~y~gf  530 (667)
                      ||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||+|||+||+||||||||||+|+||
T Consensus       638 ~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~iIf~aSaqHAAVNfgQydy~gf  717 (853)
T 2iuj_A          638 WVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATLIWIASALHAAVNFGQYPYGGL  717 (853)
T ss_dssp             HHHHHHHHHCSCHHHHTTCHHHHHHHHHHHHTTTGGGTTCTTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHSS
T ss_pred             HHHHHHHHhcCCchhccCCHHHHHHHHHHHhcCCCCcccCCCCCCccCHHHHHHHhheeeecccchhhhhccCccchhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCChhHHhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccccCCC-CCCCcHHHHH
Q 005962          531 FPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQ-AWGDDPVIKA  609 (667)
Q Consensus       531 vPN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~yLG~~~~~-~~~~d~~~~~  609 (667)
                      +||+|++||+|||+  +|..+|++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|+++ .|++|+++++
T Consensus       718 vPN~P~~~r~p~P~--~g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~l~~lLS~~~~de~yLG~~~~~~~~~~d~~~~~  795 (853)
T 2iuj_A          718 ILNRPTISRRFMPE--KGSPEYDALAKNPEKEFLKTITGKKETLIDLTIIEILSRHASDEFYLGQRDGGDYWTSDAGPLE  795 (853)
T ss_dssp             TTTSCCCBCSCCCC--SSCHHHHHHHHCHHHHHHTTBCCHHHHHHHHHHHHHTTCBCTTCCBTTTCSSCTTSCSCHHHHH
T ss_pred             cCCCChhhcCCCCC--CCchhhhhhhhChHHHHHHhCCCHHHHHHHHHHHHHHcCCCCCcccccccCcccccccCHHHHH
Confidence            99999999999995  49999999999999999999999999999999999999999999999999987 8999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccccccCCCCcCCceeecCCCCCCCCcCCCCccccC
Q 005962          610 AFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  667 (667)
Q Consensus       610 a~~~F~~~L~~ie~~I~~RN~~~~~~~r~~~~~~PY~yL~Ps~~~g~t~~~IpnSisI  667 (667)
                      |+++|+++|++||++|++||++++||||+||+++||+||+|+++||||||||||||||
T Consensus       796 a~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~s~~g~t~~~IPNSIsI  853 (853)
T 2iuj_A          796 AFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI  853 (853)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSSCGGGTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchhhccCCCCCCCceeeCCCCCCCcccCCCCCcccC
Confidence            9999999999999999999999999999999999999999999999999999999998
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Back     alignment and structure
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 667
d3bnea1690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 0.0
d2p0ma1551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 0.0
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  759 bits (1962), Expect = 0.0
 Identities = 256/623 (41%), Positives = 375/623 (60%), Gaps = 16/623 (2%)

Query: 50  DPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAII--DTDLGFPYFT 107
           DP +E +  + YVPRDE    +K          S+   + P+ E+A     T + F  F 
Sbjct: 79  DPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ 138

Query: 108 TIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFR 167
            +  L+  G+ +P         L     P + +     G+ +L+F  P  +   +  W  
Sbjct: 139 DVHDLYEGGIKLPRDVISTIIPL-----PVIKELYRTDGQHILKFPQPHVVQVSQSAWMT 193

Query: 168 DEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAI 227
           DEEF R+ +AG+NP  IR + E+P +S LDP IYG   S IT + ++ +     T++EA+
Sbjct: 194 DEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLDLDG---YTMDEAL 250

Query: 228 KQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDG-- 285
             ++LF+LDYHD+ +PYV ++ +L     Y +RT+ F    GTL+P+AIEL+ P   G  
Sbjct: 251 GSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDL 310

Query: 286 KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLS 345
                QV  P+    E  +W LAKA+V+ +DS YHQL+SHWL TH   EP++IAT+R LS
Sbjct: 311 SAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLS 370

Query: 346 AMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDH 405
            +HPI +LL PH+R  M INALAR++L+NA GI E+TF P KYS+E+SS  Y K+W F  
Sbjct: 371 VLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYSVEMSSAVY-KNWVFTD 429

Query: 406 EALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSS 465
           +ALP DLI RG+A++DPS P G++L IEDYP+A DGL++W A+K WV ++V  YY     
Sbjct: 430 QALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDD 489

Query: 466 VESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQY 525
           V++D EL+ WW E    GH D KD+PWWP L+T EDL+++   I W+AS  HAAVNFGQY
Sbjct: 490 VKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQY 549

Query: 526 TFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSS 585
            +GG   NRPT +R  +P  +    +++  +   E   L+   S++     +++++ LS+
Sbjct: 550 PYGGLIMNRPTASRRLLP--EKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILST 607

Query: 586 HSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NRTGAGMVP 644
           H+ DE YLG++    W  D     AF++F  +LKE+E  +  RN + +L+ NR G   +P
Sbjct: 608 HASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLP 667

Query: 645 YELMKPFSEPGVTGQGVPYSISI 667
           Y L+ P SE G+T +G+P SISI
Sbjct: 668 YTLLYPSSEEGLTFRGIPNSISI 690
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query667
d3bnea1690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d2p0ma1551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 100.0
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=3.9e-177  Score=1495.45  Aligned_cols=608  Identities=42%  Similarity=0.808  Sum_probs=582.9

Q ss_pred             CCCCCCCCCCCCCccCCCCCcchhhhhhhhhhHHHHHHhhhhhhhhhhhc--cCCCCCCCHHHHHHHhhcCCCCCCchhh
Q 005962           48 IADPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAII--DTDLGFPYFTTIDKLFNEGVNVPMPETF  125 (667)
Q Consensus        48 ~~d~~~e~r~~~~ylPrDe~F~~~K~~~f~~~~~~~~~~~~~~~l~~~~~--~~~~~f~sf~di~~Ly~~~~~~~~~~~~  125 (667)
                      +|||++|||...+||||||+|++.|.+||.+.++|+++|.++|.++++++  .+..+|+||+||++||++|++++.    
T Consensus        77 ~~dp~~e~r~~~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~----  152 (690)
T d3bnea1          77 VTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPR----  152 (690)
T ss_dssp             SSCTTSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCH----
T ss_pred             CCCCCcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCch----
Confidence            69999999999999999999999999999999999999999999999875  356789999999999999998883    


Q ss_pred             hHHHHHHhh-hhhhhhhccccccccccccCccccccCcccccccHHHHHHHhhCCCccccccccCCCCCCCCCCccCCCC
Q 005962          126 KEKALWRTI-LPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPP  204 (667)
Q Consensus       126 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~Fg~Q~L~G~NP~~I~~~~~~P~~~~ld~~~yg~~  204 (667)
                        +...+.. ++.+.+.+.++++.++|||+|+|+++++++|++|++||||+|||+||++|+||+++|++++||++.||++
T Consensus       153 --~~~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~  230 (690)
T d3bnea1         153 --DVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQ  230 (690)
T ss_dssp             --HHHHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCC
T ss_pred             --hhhhhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCch
Confidence              2222322 5568888889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccHHHHHHHhCCcccHHHHHhcCcEEEeccccccchhhhhcccCCCccccccceEEEecCCCceeeEEEEecCCCCC
Q 005962          205 ESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMD  284 (667)
Q Consensus       205 ~~~vt~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~in~~~g~~~yA~~~Lffl~~~g~L~PiAIqL~~~~~~  284 (667)
                      .++||+++++  ++| +||++||++|||||+|||++++|++.++|...+++.|||+||||++++|+|+||||||++++..
T Consensus       231 ~s~it~~~i~--l~G-~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~  307 (690)
T d3bnea1         231 SSKITADSLD--LDG-YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSA  307 (690)
T ss_dssp             CCCCCGGGCC--CTT-CCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCT
T ss_pred             hhhhhHhhhc--cCc-cHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCC
Confidence            9999999885  678 9999999999999999999999999999999999999999999999999999999999998754


Q ss_pred             CC--CCCCceeeCCCCCCCchhHHHHHHHHHhhhhhhhHHHHhhhhhccchhHHHHHHhccCCccCchhhhcccchhhhh
Q 005962          285 GK--PQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTM  362 (667)
Q Consensus       285 ~~--~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~tl  362 (667)
                      ++  +..++||||+|++.++|.|+|||+||++||+++||+|+||++||+++|||||||+||||.+|||||||.||||+||
T Consensus       308 ~~~~~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl  387 (690)
T d3bnea1         308 GDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNM  387 (690)
T ss_dssp             TCCCCCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHH
T ss_pred             cccCCCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHHHHHHHhcCCccCCHHHhcchhhhhhH
Confidence            43  5679999999976668999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHhhcccCCcccccccCCchhHHHHHHHHHhccCCCCCCCCchHHHhcCCCCCCCCCCccccccccCCccchhhH
Q 005962          363 EINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGL  442 (667)
Q Consensus       363 ~IN~~AR~~LI~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~DL~~RG~~~~D~~~~~g~~~~lp~YpYrdDgl  442 (667)
                      +||++||++||++||++|+++++|+++++|++++|++ |+|++++||+||++|||+++|+++|||+++.|||||||||||
T Consensus       388 ~IN~~AR~~LI~~gGiie~~~~~~~~~~el~~~ayk~-w~f~~~~lP~dL~~RGv~~~d~~~p~g~~l~ipdYPYrdDgL  466 (690)
T d3bnea1         388 NINALARQSLINANGIAETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGL  466 (690)
T ss_dssp             HHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHHTTSEEECTTSTTSEEESSSSCHHHHHHH
T ss_pred             HHHHHHHHhccCCCCeeeecccCchhHHHHHHHHHhc-CcccccCCHHHHHHcCCCcccccccccccccCCCCchhhhHH
Confidence            9999999999999999999999999999999999998 999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcccccccccCcCCCHHHHHHHHHHHhhcCCCCCCCCCCCCCCChhHHHHHHhHhhhccccccccccc
Q 005962          443 DLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNF  522 (667)
Q Consensus       443 ~iW~aI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~~~t~~~Lv~~lT~iIf~aSaqHAAVNf  522 (667)
                      +||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||+|||+||+|||||||
T Consensus       467 ~iW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNf  546 (690)
T d3bnea1         467 EIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNF  546 (690)
T ss_dssp             HHHHHHHHHHHHHGGGTCSSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTSCCCCSHHHHHHHHHHHHHHHTHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhccCCccccccCHHHHHHHHHHhcccCCCCCCCCCCCCCCCHHHHHHHHHHHHhhccHHHhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccCCcccccCCCCCCCCCCChhHHhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccccCCCCCC
Q 005962          523 GQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWG  602 (667)
Q Consensus       523 gQ~~y~gfvPN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~yLG~~~~~~~~  602 (667)
                      |||+|+||+||+|++||+++|++  |..++++++.+|++++|++||++.||+.+|+++++||+|+.||+|||+|++..|+
T Consensus       547 gQy~y~gfvPN~P~~~r~~~P~~--~~~~~~~~~~~~e~~~L~tLP~~~qa~~~~~~~~~LS~~~~de~yLG~~~~~~~~  624 (690)
T d3bnea1         547 GQYPYGGLIMNRPTASRRLLPEK--GTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWT  624 (690)
T ss_dssp             THHHHHSSTTTSCCCBCCCCCCT--TSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSCTTSC
T ss_pred             ccccccCcCCCCChHhcCCCCCC--CChhhhhhhhchHHHHHHhCCcHHHHHHHHHHHHHhccCCCCcccCCCCCCcccc
Confidence            99999999999999999999987  8889999999999999999999999999999999999999999999999988999


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-ccCCCCcCCceeecCCCCCCCCcCCCCccccC
Q 005962          603 DDPVIKAAFERFSGRLKELEGIIDERNANENLK-NRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  667 (667)
Q Consensus       603 ~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~~-~r~~~~~~PY~yL~Ps~~~g~t~~~IpnSisI  667 (667)
                      +|+++++|+++|+++|++||++|++||+++++| ||+|++++||+||+|+++||||||||||||||
T Consensus       625 ~D~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~Ps~~~g~t~~gIPnSIsI  690 (690)
T d3bnea1         625 SDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI  690 (690)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred             cChHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCCCCccccCCCCCCCcCcCCCCCcccC
Confidence            999999999999999999999999999999999 99999999999999999999999999999998
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure