Citrus Sinensis ID: 005994

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660------
MNEVASDDIKLIIISLITPTVRMEITYASPSSQNLSSSSQRSSSNVSMPAARPVKVIPLQHPETTSSSSAASSFGASVSKRIGNFKRMTWIQWIETFLPCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQPNKFSTCSTFSTLSFCHGVWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPNPLPDDNLSFLQRLLKSRGEDLSIAELESGAQRPPDFKNTDPKLEPLLSRKT
cccccccccEEEEEEEccccEEEEEEEcccccccccccccccccccccccccccEEEcccccccccccccccccHHHHHHHHcccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccEEEEEEcccEEEccHHHHHHHHHHHHHHcccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccHHHHHHccccccccccccccccccccccc
ccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEccHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccHccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccEEEEcHHHcccccccccEEEEEEcccEHHccHHHHHHHHHHHHHcHHHHHHcccccccEEEEEEEcccccHccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccHHHHcccccEEEEHHHHHHHHHHHHHHccccccccccccHHcHHHHHHHHHHccccccHHHHccccccccccccccccccccccccc
MNEVASDDIKLIIISLITptvrmeityaspssqnlssssqrsssnvsmpaarpvkviplqhpettssssaassFGASVSKRIGNFKRMTWIQWIETFlpcsrwirtyKWREYFQVDLMAGTTVGIMLVpqllswqpnkfstcstfstlsfchgvWWIKYYSIYHAVISGFTTASAIVIALSQAKYFlgydvarsskivpLIKSIIlgadkfswppflvGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVkiyhppsitlvgdipqglpnfsipksfecamslipTAILITGVAILESVGIAKALAAkngyeldsnqelfGLGVANILGSffsaypttgsfsrsavnhesgaktglsGVITGIIMACALLFmtplfehipQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHEsanphiailgrlpgttvyrntqqypeaytyHGIVIVRIDAPIYFANISFLKDRLREYEvdvdrstrrgpeveRIYFVILEmapvtyidsSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSlketanapnplpddnLSFLQRLLKSRgedlsiaelesgaqrppdfkntdpklepllsrkt
mnevasddiKLIIISLITPTVRMEITYaspssqnlssssqrsssnvsMPAARPVKVIPLQHpettssssaassfgaSVSKRIGNFKRMTWIQWIETFLPCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQPNKFSTCSTFSTLSFCHGVWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREyevdvdrstrrgpeverIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKEtanapnplpdDNLSFLQRLLKSRGEDLSIAelesgaqrppdfkntdpklepllsrkt
MNEVAsddikliiisliTPTVRMEITYAspssqnlssssqrsssnvsMPAARPVKVIPLQHPETTssssaassfgasvsKRIGNFKRMTWIQWIETFLPCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQPNKfstcstfstlsfcHGVWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFlgieigvlvgvgASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPNPLPDDNLSFLQRLLKSRGEDLSIAELESGAQRPPDFKNTDPKLEPLLSRKT
*******DIKLIIISLITPTVRMEITY****************************************************KRIGNFKRMTWIQWIETFLPCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQPNKFSTCSTFSTLSFCHGVWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVN***GAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQS************************************************************
*****SD*IKLIIISLITPTVRMEIT**********************************************************FKRMTWIQWIETFLPCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQPNKFSTCSTFSTLSFCHGVWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCL**********************************************************PLL****
MNEVASDDIKLIIISLITPTVRMEITYA*********************AARPVKVIPLQ***************ASVSKRIGNFKRMTWIQWIETFLPCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQPNKFSTCSTFSTLSFCHGVWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPNPLPDDNLSFLQRLLKSRGEDLSIAELESGAQRPPDFKNTDPKLEPLLSRKT
******DDIKLIIISLITPTVR*********************************VI************AASSFGASVSKRIGNFKRMTWIQWIETFLPCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQPNKFSTCSTFSTLSFCHGVWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLK*TANAPNPLPDDNLSFLQRLLKSR**********************************
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MNEVASDDIKLIIISLITPTVRMEITYASPSSQNLSSSSQRSSSNVSMPAARPVKVIPLQHPETTSSSSAASSFGASVSKRIGNFKRMTWIQWIETFLPCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQPNKFSTCSTFSTLSFCHGVWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANxxxxxxxxxxxxxxxxxxxxxGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPNPLPDDNLSFLQRLLKSRGEDLSIAELESGAQRPPDFKNTDPKLEPLLSRKT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query666 2.2.26 [Sep-21-2011]
Q9FY46685 Sulfate transporter 4.1, yes no 0.695 0.675 0.752 0.0
Q8GYH8677 Probable sulfate transpor no no 0.704 0.692 0.745 0.0
A8J6J0764 Proton/sulfate cotranspor N/A no 0.650 0.566 0.413 1e-99
P53392662 High affinity sulfate tra N/A no 0.671 0.675 0.356 1e-74
Q9SV13658 Sulfate transporter 3.1 O no no 0.677 0.685 0.342 5e-74
Q9SAY1649 Sulfate transporter 1.1 O no no 0.680 0.697 0.365 5e-73
P53391667 High affinity sulfate tra N/A no 0.671 0.670 0.346 2e-72
Q9FEP7656 Sulfate transporter 1.3 O no no 0.725 0.736 0.352 1e-68
O04289646 Sulfate transporter 3.2 O no no 0.674 0.695 0.346 2e-68
Q9SXS2631 Probable sulfate transpor no no 0.648 0.684 0.309 5e-64
>sp|Q9FY46|SUT41_ARATH Sulfate transporter 4.1, chloroplastic OS=Arabidopsis thaliana GN=SULTR4;1 PE=2 SV=1 Back     alignment and function desciption
 Score =  731 bits (1886), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/473 (75%), Positives = 418/473 (88%), Gaps = 10/473 (2%)

Query: 155 WWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWP 214
           W I++ S  H+VISGFT+ASAIVI LSQ KYFLGY +ARSSKIVP+++SII GADKF WP
Sbjct: 199 WLIRFIS--HSVISGFTSASAIVIGLSQIKYFLGYSIARSSKIVPIVESIIAGADKFQWP 256

Query: 215 PFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQ 274
           PF++GS+IL IL +MK +GK++K L+FLRAA PLTG+VLGTTI K++HPPSI+LVG+IPQ
Sbjct: 257 PFVMGSLILVILQVMKHVGKAKKELQFLRAAAPLTGIVLGTTIAKVFHPPSISLVGEIPQ 316

Query: 275 GLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVAN 334
           GLP FS P+SF+ A +L+PT+ LITGVAILESVGIAKALAAKN YELDSN ELFGLGVAN
Sbjct: 317 GLPTFSFPRSFDHAKTLLPTSALITGVAILESVGIAKALAAKNRYELDSNSELFGLGVAN 376

Query: 335 ILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAA 394
           ILGS FSAYP TGSFSRSAVN+ES AKTGLSG+ITGII+ C+LLF+TP+F++IPQCALAA
Sbjct: 377 ILGSLFSAYPATGSFSRSAVNNESEAKTGLSGLITGIIIGCSLLFLTPMFKYIPQCALAA 436

Query: 395 IVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHES 454
           IV+SAV GLVDYDEAIFLW VDK+DF LWTITS  TLF GIEIGVLVGVG SLAFVIHES
Sbjct: 437 IVISAVSGLVDYDEAIFLWRVDKRDFSLWTITSTITLFFGIEIGVLVGVGFSLAFVIHES 496

Query: 455 ANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDV 514
           ANPHIA+LGRLPGTTVYRN +QYPEAYTY+GIVIVRID+PIYFANIS++KDRLREYEV V
Sbjct: 497 ANPHIAVLGRLPGTTVYRNIKQYPEAYTYNGIVIVRIDSPIYFANISYIKDRLREYEVAV 556

Query: 515 DRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLT 574
           D+ T RG EV+RI FVILEM+PVT+IDSSAV+ALK+LYQEYK+RDIQ+AISN N +V LT
Sbjct: 557 DKYTNRGLEVDRINFVILEMSPVTHIDSSAVEALKELYQEYKTRDIQLAISNPNKDVHLT 616

Query: 575 LSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPNPLPDDNLSFLQR 627
           +++SG+V+L+GKEW+FVR HDAVQVCLQ+VQS        + L D +LSF +R
Sbjct: 617 IARSGMVELVGKEWFFVRVHDAVQVCLQYVQS--------SNLEDKHLSFTRR 661
H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8GYH8|SUT42_ARATH Probable sulfate transporter 4.2 OS=Arabidopsis thaliana GN=SULTR4;2 PE=2 SV=2 Back     alignment and function description
>sp|A8J6J0|SULT2_CHLRE Proton/sulfate cotransporter 2 OS=Chlamydomonas reinhardtii GN=SULTR2 PE=2 SV=1 Back     alignment and function description
>sp|P53392|SUT2_STYHA High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAY1|SUT11_ARATH Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2 Back     alignment and function description
>sp|P53391|SUT1_STYHA High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1 Back     alignment and function description
>sp|O04289|SUT32_ARATH Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query666
356568949698 PREDICTED: sulfate transporter 4.1, chlo 0.762 0.727 0.812 0.0
359486659706 PREDICTED: probable sulfate transporter 0.765 0.722 0.810 0.0
296086306681 unnamed protein product [Vitis vinifera] 0.765 0.748 0.810 0.0
356502440702 PREDICTED: sulfate transporter 4.1, chlo 0.762 0.723 0.810 0.0
117557160676 sulfate transporter [Populus tremula x P 0.776 0.764 0.788 0.0
117557150678 sulfate transporter [Populus tremula x P 0.765 0.752 0.789 0.0
449464222700 PREDICTED: sulfate transporter 4.1, chlo 0.764 0.727 0.778 0.0
357502997 1197 Sulfate transporter [Medicago truncatula 0.764 0.425 0.776 0.0
449520517 923 PREDICTED: LOW QUALITY PROTEIN: sulfate 0.722 0.521 0.786 0.0
224100913612 sulfate/bicarbonate/oxalate exchanger an 0.672 0.732 0.833 0.0
>gi|356568949|ref|XP_003552670.1| PREDICTED: sulfate transporter 4.1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/513 (81%), Positives = 460/513 (89%), Gaps = 5/513 (0%)

Query: 155 WWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWP 214
           W I++ S  H+VISGFTTASAIVI LSQAKYFLGYD+  SSKI+P++KSII GADKFSWP
Sbjct: 186 WLIRFIS--HSVISGFTTASAIVIGLSQAKYFLGYDIDGSSKIIPVVKSIIAGADKFSWP 243

Query: 215 PFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQ 274
           PF++GSI+LAILL+MK LGKSRKYLRFLRAAGPLT VVLGTT  KI+HP SI+LVGDIPQ
Sbjct: 244 PFVMGSIMLAILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTTFAKIFHPSSISLVGDIPQ 303

Query: 275 GLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVAN 334
           GLP FS+PKSFE A SLIPTA+LITGVAILESVGIAKALAAKNGYELDSNQELFGLGV+N
Sbjct: 304 GLPKFSVPKSFEYAQSLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSN 363

Query: 335 ILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAA 394
           +LGSFFSAYPTTGSFSRSAVNHESGAK+G+SG+++GIIM CALLF+TPLFE+IPQC LAA
Sbjct: 364 VLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIMTCALLFLTPLFEYIPQCTLAA 423

Query: 395 IVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASLAFVIHES 454
           IV+SAV+GLVDYDEAIFLW VDKKDFLLWTITS TTLFLGIEIGVLVGVG SLAFVIHES
Sbjct: 424 IVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGVSLAFVIHES 483

Query: 455 ANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDV 514
           ANPHIA+LGRLPGTTVYRN +QYPEAYTY+GIVIVR+DAPIYFAN S++KDRLREYEVDV
Sbjct: 484 ANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSYIKDRLREYEVDV 543

Query: 515 DRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLT 574
           DRS RRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYK RDIQIAISN + EVLLT
Sbjct: 544 DRSKRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLT 603

Query: 575 LSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPN-PLP--DDNLSFLQRLLKS 631
           LS+SG+V+LIGKEWYFVR HDAVQVCLQHVQSLK  +N+P  P    ++  S   RL K 
Sbjct: 604 LSRSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKGASNSPQAPFSSVENKPSLFARLSKE 663

Query: 632 RGEDLSIAELESGAQRPPDFKNTDPKLEPLLSR 664
           R E LSI +LESG  RPP  +  D KLEPLLS+
Sbjct: 664 RVEKLSITDLESGNGRPPLPEERDSKLEPLLSK 696

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359486659|ref|XP_002282491.2| PREDICTED: probable sulfate transporter 4.2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296086306|emb|CBI31747.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356502440|ref|XP_003520027.1| PREDICTED: sulfate transporter 4.1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|117557160|gb|ABK35757.1| sulfate transporter [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|117557150|gb|ABK35752.1| sulfate transporter [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|449464222|ref|XP_004149828.1| PREDICTED: sulfate transporter 4.1, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357502997|ref|XP_003621787.1| Sulfate transporter [Medicago truncatula] gi|355496802|gb|AES78005.1| Sulfate transporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|449520517|ref|XP_004167280.1| PREDICTED: LOW QUALITY PROTEIN: sulfate transporter 4.1, chloroplastic-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|224100913|ref|XP_002312065.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222851885|gb|EEE89432.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query666
TAIR|locus:2185031685 SULTR4;1 "sulfate transporter 0.695 0.675 0.731 1.3e-204
TAIR|locus:2092517677 SULTR4;2 "sulfate transporter 0.690 0.679 0.733 2.7e-202
UNIPROTKB|A8J6J0764 SULTR2 "Proton/sulfate cotrans 0.650 0.566 0.404 5.8e-103
TAIR|locus:2138561649 SULTR1;1 "sulphate transporter 0.659 0.676 0.358 5.2e-77
TAIR|locus:2030606656 SULTR1;3 "sulfate transporter 0.654 0.664 0.358 3.6e-76
TAIR|locus:3437527658 SULTR3;1 "AT3G51895" [Arabidop 0.677 0.685 0.333 6.7e-75
TAIR|locus:2029396653 SULTR1;2 "sulfate transporter 0.654 0.667 0.349 8.5e-75
TAIR|locus:2132333646 SULTR3;2 "sulfate transporter 0.680 0.701 0.331 1.6e-73
TAIR|locus:2201220631 AST91 "sulfate transporter 91" 0.648 0.684 0.3 5.4e-65
TAIR|locus:2093452653 SULTR3;4 "sulfate transporter 0.647 0.660 0.309 7.7e-64
TAIR|locus:2185031 SULTR4;1 "sulfate transporter 4.1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1766 (626.7 bits), Expect = 1.3e-204, Sum P(2) = 1.3e-204
 Identities = 346/473 (73%), Positives = 408/473 (86%)

Query:   155 WWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWP 214
             W I++ S  H+VISGFT+ASAIVI LSQ KYFLGY +ARSSKIVP+++SII GADKF WP
Sbjct:   199 WLIRFIS--HSVISGFTSASAIVIGLSQIKYFLGYSIARSSKIVPIVESIIAGADKFQWP 256

Query:   215 PFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQ 274
             PF++GS+IL IL +MK +GK++K L+FLRAA PLTG+VLGTTI K++HPPSI+LVG+IPQ
Sbjct:   257 PFVMGSLILVILQVMKHVGKAKKELQFLRAAAPLTGIVLGTTIAKVFHPPSISLVGEIPQ 316

Query:   275 GLPNFSIPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVAN 334
             GLP FS P+SF+ A +L+PT+ LITGVAILESVGIAKALAAKN YELDSN ELFGLGVAN
Sbjct:   317 GLPTFSFPRSFDHAKTLLPTSALITGVAILESVGIAKALAAKNRYELDSNSELFGLGVAN 376

Query:   335 ILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAA 394
             ILGS FSAYP TGSFSRSAVN+ES AKTGLSG+ITGII+ C+LLF+TP+F++IPQCALAA
Sbjct:   377 ILGSLFSAYPATGSFSRSAVNNESEAKTGLSGLITGIIIGCSLLFLTPMFKYIPQCALAA 436

Query:   395 IVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFXXXXXXXXXXXXASLAFVIHES 454
             IV+SAV GLVDYDEAIFLW VDK+DF LWTITS  TLF             SLAFVIHES
Sbjct:   437 IVISAVSGLVDYDEAIFLWRVDKRDFSLWTITSTITLFFGIEIGVLVGVGFSLAFVIHES 496

Query:   455 ANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDV 514
             ANPHIA+LGRLPGTTVYRN +QYPEAYTY+GIVIVRID+PIYFANIS++KDRLREYEV V
Sbjct:   497 ANPHIAVLGRLPGTTVYRNIKQYPEAYTYNGIVIVRIDSPIYFANISYIKDRLREYEVAV 556

Query:   515 DRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLT 574
             D+ T RG EV+RI FVILEM+PVT+IDSSAV+ALK+LYQEYK+RDIQ+AISN N +V LT
Sbjct:   557 DKYTNRGLEVDRINFVILEMSPVTHIDSSAVEALKELYQEYKTRDIQLAISNPNKDVHLT 616

Query:   575 LSKSGVVDLIGKEWYFVRAHDAVQVCLQHVQSLKETANAPNPLPDDNLSFLQR 627
             +++SG+V+L+GKEW+FVR HDAVQVCLQ+VQS    +N    L D +LSF +R
Sbjct:   617 IARSGMVELVGKEWFFVRVHDAVQVCLQYVQS----SN----LEDKHLSFTRR 661
GO:0005215 "transporter activity" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0008271 "secondary active sulfate transmembrane transporter activity" evidence=IEA
GO:0008272 "sulfate transport" evidence=IEA
GO:0015116 "sulfate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2092517 SULTR4;2 "sulfate transporter 4;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A8J6J0 SULTR2 "Proton/sulfate cotransporter 2" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
TAIR|locus:2138561 SULTR1;1 "sulphate transporter 1;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030606 SULTR1;3 "sulfate transporter 1;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:3437527 SULTR3;1 "AT3G51895" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029396 SULTR1;2 "sulfate transporter 1;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132333 SULTR3;2 "sulfate transporter 3;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201220 AST91 "sulfate transporter 91" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093452 SULTR3;4 "sulfate transporter 3;4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FY46SUT41_ARATHNo assigned EC number0.75260.69510.6759yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query666
TIGR00815563 TIGR00815, sulP, high affinity sulphate transporte 1e-153
COG0659554 COG0659, SUL1, Sulfate permease and related transp 8e-92
pfam00916279 pfam00916, Sulfate_transp, Sulfate transporter fam 2e-85
PRK11660568 PRK11660, PRK11660, putative transporter; Provisio 1e-31
cd07042107 cd07042, STAS_SulP_like_sulfate_transporter, Sulph 6e-27
pfam01740106 pfam01740, STAS, STAS domain 2e-22
COG2233451 COG2233, UraA, Xanthine/uracil permeases [Nucleoti 2e-08
TIGR03173406 TIGR03173, pbuX, xanthine permease 2e-06
cd0704399 cd07043, STAS_anti-anti-sigma_factors, Sulphate Tr 4e-06
pfam1379283 pfam13792, Sulfate_tra_GLY, Sulfate transporter N- 7e-06
pfam00860389 pfam00860, Xan_ur_permease, Permease family 3e-05
TIGR00815563 TIGR00815, sulP, high affinity sulphate transporte 2e-04
COG2252436 COG2252, COG2252, Xanthine/uracil/vitamin C permea 3e-04
COG1366117 COG1366, SpoIIAA, Anti-anti-sigma regulatory facto 0.001
TIGR00377108 TIGR00377, ant_ant_sig, anti-anti-sigma factor 0.003
>gnl|CDD|162054 TIGR00815, sulP, high affinity sulphate transporter 1 Back     alignment and domain information 
 Score =  454 bits (1169), Expect = e-153
 Identities = 200/449 (44%), Positives = 279/449 (62%), Gaps = 12/449 (2%)

Query: 155 WWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVA-RSSKIVPLIKSIILGADKFS- 212
           + I++ S  HAVISGF T +AI I LSQ K  LG  +    +  + ++ S   G      
Sbjct: 120 FLIEFLS--HAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHN 177

Query: 213 --WPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKI--YHPPSITL 268
             W   ++G ++L  LL  K+LGK  K L F  A  PL  V+L T  V I  +    +++
Sbjct: 178 WNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSI 237

Query: 269 VGDIPQGLPNFS-IPKSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQEL 327
           +G IP GL  F  I   +E   +L P AI I  V ++ES+ IA++ A   GY++D+NQEL
Sbjct: 238 LGHIPSGLSFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQEL 297

Query: 328 FGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHI 387
              G+ANI+GSFFS YP TGS SR+AVN ++G +T LSGV+T I++   LL +TPLF +I
Sbjct: 298 VAQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYI 357

Query: 388 PQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITSITTLFLGIEIGVLVGVGASL 447
           PQ ALAAI++SAV GL+DY E   LW  DK DF++W +T    +F  IEIG+LVGV  S 
Sbjct: 358 PQAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSA 417

Query: 448 AFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRL 507
           AF++   A P  A+LGR+PGT VYR+ +QYP A    GI++ R+D P+YFAN   LKDRL
Sbjct: 418 AFLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGPLYFANAEDLKDRL 477

Query: 508 REYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNL 567
            +   D    TRR  E   +  VIL+M+ V ++D+S + AL++L +E K+R IQ+ ++N 
Sbjct: 478 LKRIED---ETRRELERPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANP 534

Query: 568 NHEVLLTLSKSGVVDLIGKEWYFVRAHDA 596
           N  V  TL + G+V+LIG+E +F    DA
Sbjct: 535 NKAVRSTLKRGGLVELIGEEHFFPSVSDA 563

The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out) [Transport and binding proteins, Anions]. Length = 563
>gnl|CDD|223732 COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216188 pfam00916, Sulfate_transp, Sulfate transporter family Back     alignment and domain information
>gnl|CDD|183265 PRK11660, PRK11660, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|132913 cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>gnl|CDD|201948 pfam01740, STAS, STAS domain Back     alignment and domain information
>gnl|CDD|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|234136 TIGR03173, pbuX, xanthine permease Back     alignment and domain information
>gnl|CDD|132914 cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>gnl|CDD|205965 pfam13792, Sulfate_tra_GLY, Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>gnl|CDD|216158 pfam00860, Xan_ur_permease, Permease family Back     alignment and domain information
>gnl|CDD|162054 TIGR00815, sulP, high affinity sulphate transporter 1 Back     alignment and domain information
>gnl|CDD|225161 COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|224285 COG1366, SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|129473 TIGR00377, ant_ant_sig, anti-anti-sigma factor Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 666
TIGR00815563 sulP high affinity sulphate transporter 1. (2) SO4 100.0
KOG0236665 consensus Sulfate/bicarbonate/oxalate exchanger SA 100.0
COG0659554 SUL1 Sulfate permease and related transporters (MF 100.0
PRK11660568 putative transporter; Provisional 100.0
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 100.0
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 99.93
TIGR03173406 pbuX xanthine permease. All the seed members of th 99.92
PRK10720428 uracil transporter; Provisional 99.92
COG2252436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.91
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 99.84
TIGR03616429 RutG pyrimidine utilization transport protein G. T 99.77
PRK11412433 putative uracil/xanthine transporter; Provisional 99.75
PF01740117 STAS: STAS domain; InterPro: IPR002645 The STAS (S 99.7
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 99.67
TIGR02886106 spore_II_AA anti-sigma F factor antagonist. The an 99.61
cd07041109 STAS_RsbR_RsbS_like Sulphate Transporter and Anti- 99.6
cd06844100 STAS Sulphate Transporter and Anti-Sigma factor an 99.53
TIGR00377108 ant_ant_sig anti-anti-sigma factor. This superfami 99.36
TIGR00843395 benE benzoate transporter. The benzoate transporte 99.35
cd07042107 STAS_SulP_like_sulfate_transporter Sulphate Transp 99.31
PF1379284 Sulfate_tra_GLY: Sulfate transporter N-terminal do 99.21
cd0704399 STAS_anti-anti-sigma_factors Sulphate Transporter 99.2
PF03594378 BenE: Benzoate membrane transport protein; InterPr 99.11
COG1366117 SpoIIAA Anti-anti-sigma regulatory factor (antagon 99.04
PF1346680 STAS_2: STAS domain 98.89
TIGR00834900 ae anion exchange protein. They preferentially cat 98.53
COG3135402 BenE Uncharacterized protein involved in benzoate 98.45
KOG1172876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 98.22
KOG1292510 consensus Xanthine/uracil transporters [Nucleotide 98.03
COG311399 Predicted NTP binding protein (contains STAS domai 97.43
PF11840492 DUF3360: Protein of unknown function (DUF3360); In 97.34
PF00955510 HCO3_cotransp: HCO3- transporter family Only parti 96.9
PF11964109 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 Th 94.15
COG0659 554 SUL1 Sulfate permease and related transporters (MF 93.33
TIGR00815 563 sulP high affinity sulphate transporter 1. (2) SO4 93.0
PF13344101 Hydrolase_6: Haloacid dehalogenase-like hydrolase; 86.23
PRK11660 568 putative transporter; Provisional 85.3
PF1421374 DUF4325: Domain of unknown function (DUF4325) 83.81
KOG3040 262 consensus Predicted sugar phosphatase (HAD superfa 81.08
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information 
Probab=100.00  E-value=5.3e-82  Score=718.91  Aligned_cols=492  Identities=45%  Similarity=0.717  Sum_probs=444.7

Q ss_pred             cccccccCCCcchhhhhhhhhHHHHHHHhhhcccccc------ccc--------------ccCCh---------------
Q 005994           99 PCSRWIRTYKWREYFQVDLMAGTTVGIMLVPQLLSWQ------PNK--------------FSTCS---------------  143 (666)
Q Consensus        99 p~~~wl~~y~~~~~l~~D~~AGitv~~~~iPq~maya------Pi~--------------fGsS~---------------  143 (666)
                      |+++|+++|++ +++++|++||+|++++++||+||||      |.|              ||+|+               
T Consensus         1 p~~~wl~~y~~-~~l~~Di~aGltv~~~~iP~~~ayA~laglpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~   79 (563)
T TIGR00815         1 PVLRWLPHYRL-KKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLG   79 (563)
T ss_pred             ChhhhhhhCCH-HHhhhHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHH
Confidence            78999999996 5899999999999999999999999      433              88883               


Q ss_pred             --------------hh----HHHHHhhc-----------ceeEEecccchhHHHHHHHhHHHHHHHhhhhHHhCcccC-C
Q 005994          144 --------------TF----STLSFCHG-----------VWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVA-R  193 (666)
Q Consensus       144 --------------~~----~~la~l~G-----------G~l~~~~~ip~~Vi~Gf~~gigl~I~~~ql~~~~G~~~~-~  193 (666)
                                    ++    .++++++|           |++++|  +|+||+.||++|+|++|+.+|+++++|++.+ .
T Consensus        80 ~~v~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrlG~l~~~--is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~  157 (563)
T TIGR00815        80 SVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGFLIEF--LSHAVISGFMTGAAITIGLSQLKGLLGISIFNT  157 (563)
T ss_pred             HHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence                          11    36677777           999999  9999999999999999999999999999763 3


Q ss_pred             CCccHHHHHHHHhhcCCC---CchhHHHHHHHHHHHHHHHHhhhhhhhhhhhcchhhHHHHHHHHHhhhhcC--CCccee
Q 005994          194 SSKIVPLIKSIILGADKF---SWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYH--PPSITL  268 (666)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~---~~~~~~lg~~~l~~l~~~~~~~~~~~~~~~~~~p~~Li~vv~gt~~~~~~~--~~~v~~  268 (666)
                      ..++.+.+...+.++++.   ||++++++++++++++..++++++.++..+..+|.+|+++++++++++.++  ..++.+
T Consensus       158 ~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~~~~~~~  237 (563)
T TIGR00815       158 RTDTLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSI  237 (563)
T ss_pred             CCChHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHccCCCCeEE
Confidence            345566666677777666   999999999999999988888776554333456889999999998887653  447889


Q ss_pred             eeccCCCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHhhhhhhhhhccCCCCccc
Q 005994          269 VGDIPQGLPNFSIP-KSFECAMSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANILGSFFSAYPTTG  347 (666)
Q Consensus       269 vg~ip~glp~~~~P-~~~~~~~~ll~~a~~ia~v~~~es~~~~~~~a~~~~~~~d~nrEL~a~GlaNi~sglfGg~P~~~  347 (666)
                      +|++|.++|.+.+| .+++.+..+++.++++++++++|++++++++++++|+++|+||||+++|++|+++|+|||+|+++
T Consensus       238 ~g~ip~g~p~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~~~d~n~El~a~G~~N~~~~~fg~~p~~~  317 (563)
T TIGR00815       238 LGHIPSGLSFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQELVAQGIANIVGSFFSCYPATG  317 (563)
T ss_pred             EeecCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHhhHHHHHHHHhCccCCCC
Confidence            99999999888777 46889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhcCCccchHHHHHHHHHHHHHHHhHHHHhhhcHHHHHHHHHHHHhhccCHHHHHHHHhcCccCeeehhhhh
Q 005994          348 SFSRSAVNHESGAKTGLSGVITGIIMACALLFMTPLFEHIPQCALAAIVVSAVMGLVDYDEAIFLWHVDKKDFLLWTITS  427 (666)
Q Consensus       348 s~srSav~~~sGarT~la~iv~g~~~ll~ll~l~~ll~~IP~avLaaili~~~~~li~~~~~~~l~~~~~~d~~i~~~t~  427 (666)
                      +++||++|+++|+|||++++++|+++++++++++|+++++|+++||+++++++++|+++++++.+||.++.|+++|++|+
T Consensus       318 s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~l~~~~~~~~~~~~~~~d~~i~~~~~  397 (563)
T TIGR00815       318 SLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTF  397 (563)
T ss_pred             cchHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhcccCHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHhhhhHHHHHHHHHHHHHHHHHHhcCcceEEeeccCCCcccccCccCCCccccCcEEEEEeccceeeccHHHHHHHH
Q 005994          428 ITTLFLGIEIGVLVGVGASLAFVIHESANPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRL  507 (666)
Q Consensus       428 ~~~l~~~l~~Gi~vGi~~sl~~~l~~~~~p~~~~lg~~~~t~~~r~~~~~~~~~~~~~i~Iirl~G~L~F~na~~l~~~l  507 (666)
                      ++|+++|++.|+++|+++|++.+++|+++|+..+++++++++.|||.+++++.++.+++.|+|++|+|+|+|++++++++
T Consensus       398 ~~~~~~~~~~Gi~vGv~~s~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~I~r~~g~L~F~na~~~~~~l  477 (563)
T TIGR00815       398 FGVVFTSIEIGLLVGVALSAAFLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGPLYFANAEDLKDRL  477 (563)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeEeeecCCCCcccchhhCcccCCCCCEEEEEcCCceEeCcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998888888999999999999999999999999


Q ss_pred             HHhhhhcccccCCCCCcccceEEEEEcCCCCccCHHHHHHHHHHHHHHHhCCcEEEEEeCChhHHHHHHhcCCccccCCe
Q 005994          508 REYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLIGKE  587 (666)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~VILDls~V~~IDsSgl~~L~~l~~~~~~~gi~v~la~~~~~v~~~L~~~Gl~~~i~~~  587 (666)
                      ++.+++..+.   +.+.++++.+|+||++++++|+||+++|.++.++++++|++++++++++++++.|+++|+.+.++++
T Consensus       478 ~~~~~~~~~~---~~~~~~~~~vIlD~~~V~~iDsSg~~~L~~l~~~l~~~g~~l~l~~~~~~v~~~l~~~gl~~~~~~~  554 (563)
T TIGR00815       478 LKRIEDETRR---ELERPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANPNKAVRSTLKRGGLVELIGEE  554 (563)
T ss_pred             HHHHhhhccc---cccCCCceEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEecCChHHHHHHHHCCchhhcCCc
Confidence            8876532211   1111246899999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecCHHHH
Q 005994          588 WYFVRAHDA  596 (666)
Q Consensus       588 ~~f~s~~~A  596 (666)
                      ++|+|+|||
T Consensus       555 ~~f~s~~~A  563 (563)
T TIGR00815       555 HFFPSVSDA  563 (563)
T ss_pred             ceeCChhhC
Confidence            999999986

(2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>TIGR02886 spore_II_AA anti-sigma F factor antagonist Back     alignment and domain information
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation Back     alignment and domain information
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors Back     alignment and domain information
>TIGR00377 ant_ant_sig anti-anti-sigma factor Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>PF13466 STAS_2: STAS domain Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only] Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells Back     alignment and domain information
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF14213 DUF4325: Domain of unknown function (DUF4325) Back     alignment and domain information
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query666
3llo_A143 Crystal Structure Of The Stas Domain Of Motor Prote 1e-09
2kln_A130 Solution Structure Of Stas Domain Of Rv1739c From M 3e-05
>pdb|3LLO|A Chain A, Crystal Structure Of The Stas Domain Of Motor Protein Prestin (Anion Transporter Slc26a5) Length = 143 Back     alignment and structure 
Iteration: 1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 456 NPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVD 515
           +P   +LG+LP T VY +   Y E     GI I +I+APIY+AN       L+       
Sbjct: 1   SPSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKR------ 54
Query: 516 RSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTL 575
           ++   G   E I+ VIL+   V ++DS  V+ L  + +EY    I + ++  + +V+  L
Sbjct: 55  KTGVNGS--ENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDL 112
Query: 576 SKSGVVDLIG-KEWYFVRAHDAV 597
           + +   +    KE  F   HDAV
Sbjct: 113 TSNRFFENPALKELLFHSIHDAV 135
>pdb|2KLN|A Chain A, Solution Structure Of Stas Domain Of Rv1739c From M. Tuberculosis Length = 130 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query666
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 1e-47
2kln_A130 Probable sulphate-transport transmembrane protein; 2e-39
4dgh_A130 Sulfate permease family protein; STAS domain, anio 8e-34
4dgf_A135 Sulfate transporter sulfate transporter family PR; 3e-33
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 3e-24
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 1e-08
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 4e-05
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 4e-05
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 1e-04
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 1e-04
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Length = 143 Back     alignment and structure
 Score =  163 bits (415), Expect = 1e-47
 Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 9/149 (6%)

Query: 456 NPHIAILGRLPGTTVYRNTQQYPEAYTYHGIVIVRIDAPIYFANISFLKDRLREYEVDVD 515
           +P   +LG+LP T VY +   Y E     GI I +I+APIY+AN       L+       
Sbjct: 1   SPSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKRKTGVNG 60

Query: 516 RSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQIAISNLNHEVLLTL 575
                         VIL+   V ++DS  V+ L  + +EY    I + ++  + +V+  L
Sbjct: 61  SENIH--------TVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDL 112

Query: 576 SKSGVVDLIG-KEWYFVRAHDAVQVCLQH 603
           + +   +    KE  F   HDAV      
Sbjct: 113 TSNRFFENPALKELLFHSIHDAVLGSQVR 141
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Length = 130 Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Length = 130 Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Length = 135 Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Length = 118 Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Length = 99 Back     alignment and structure
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Length = 125 Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Length = 110 Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Length = 117 Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Length = 116 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query666
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 99.93
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 99.9
4dgh_A130 Sulfate permease family protein; STAS domain, anio 99.85
4dgf_A135 Sulfate transporter sulfate transporter family PR; 99.83
2kln_A130 Probable sulphate-transport transmembrane protein; 99.81
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 99.72
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 99.58
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 99.54
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 99.53
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 99.53
4hyl_A117 Stage II sporulation protein; structural genomics, 99.52
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 99.5
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 99.45
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 99.34
3agd_A456 Salt-tolerant glutaminase; glutaminase super famil 96.17
3bl4_A124 Uncharacterized protein; structural genomics, join 87.13
2q3l_A126 Uncharacterized protein; SPOIIAA-like fold, struct 84.4
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 82.09
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=99.93  E-value=4e-25  Score=241.87  Aligned_cols=239  Identities=16%  Similarity=0.141  Sum_probs=195.0

Q ss_pred             ceeEEecccchhHHHHHHHhHHHHHHHhhhhHHhCcccCCCCccHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhh
Q 005994          154 VWWIKYYSIYHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLG  233 (666)
Q Consensus       154 G~l~~~~~ip~~Vi~Gf~~gigl~I~~~ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~l~~~~~~~  233 (666)
                      +++.|+  +|+.|++.|++.||+.++..++++..|....               .+..++..+.++++++++++++.++.
T Consensus       114 ~~l~~~--~PpvviG~~i~~IGl~l~~~~~~~~~~~~~~---------------~~~~~~~~~~la~~tl~iii~~~~~~  176 (429)
T 3qe7_A          114 GWLDVL--FPPAAMGAIVAVIGLELAGVAAGMAGLLPAE---------------GQTPDSKTIIISITTLAVTVLGSVLF  176 (429)
T ss_dssp             HHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHHTSSCBT---------------TBCCCHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHHH--CCCeeeHHHHHHHHHHHHHHHHHhccccCCC---------------CccccHHHHHHHHHHHHHHHHHHHHh
Confidence            389999  9999999999999999999999875432110               03356778899999999988887765


Q ss_pred             hhhhhhhhhcchhhHHHHHHHHHhhhhcCCCcceeeeccC-CCCCCCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005994          234 KSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIP-QGLPNFSIP-KSFECAMSLIPTAILITGVAILESVGIAK  311 (666)
Q Consensus       234 ~~~~~~~~~~~p~~Li~vv~gt~~~~~~~~~~v~~vg~ip-~glp~~~~P-~~~~~~~~ll~~a~~ia~v~~~es~~~~~  311 (666)
                      |+     +++.+++|+++++|+++++.++..+.+.+++.| .++|.+..| ++++.    +...+.++++.++|++++.+
T Consensus       177 kg-----~~~~~aiLigivvg~~~a~~~G~~d~~~v~~a~~~~lP~~~~P~f~~~~----i~~i~~i~lV~~~Eslg~~~  247 (429)
T 3qe7_A          177 RG-----FLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFA----ILTILPAALVVIAEHVGHLV  247 (429)
T ss_dssp             ST-----TTTTHHHHHHHHHHHHHHHHHHHTTSSHHHHSCSSCCCCCCCCCCCHHH----HHHHTHHHHHHHHHHHHHHH
T ss_pred             cc-----cchhhHHHHHHHHHHHHHHHhcCCCcccccccccccccCCCCCcccHHH----HHHHHHHHHHHHHHHHHHHH
Confidence            53     456678899999999999988766666566655 467777777 34443    33456788899999999999


Q ss_pred             HHHhhcCC----CCChhhHHHHhhhhhhhhhccCCCCcccccchhhhhhhcCCccchHHHHHHHHHHHHHHH--hHHHHh
Q 005994          312 ALAAKNGY----ELDSNQELFGLGVANILGSFFSAYPTTGSFSRSAVNHESGAKTGLSGVITGIIMACALLF--MTPLFE  385 (666)
Q Consensus       312 ~~a~~~~~----~~d~nrEL~a~GlaNi~sglfGg~P~~~s~srSav~~~sGarT~la~iv~g~~~ll~ll~--l~~ll~  385 (666)
                      +.++..++    +.+.|||+.++|++|+++|+|||+|.|++..+++++..+|++||++.+++|++++++.++  ++++++
T Consensus       248 av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~p~Tt~~en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~  327 (429)
T 3qe7_A          248 VTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQ  327 (429)
T ss_dssp             HHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHT
T ss_pred             HHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCCCcchHHHhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99888774    447899999999999999999999998877777888899999999999999999887754  678999


Q ss_pred             hhcHHHHHHHHHHHHhhccCHHHHHHH--HhcCccC
Q 005994          386 HIPQCALAAIVVSAVMGLVDYDEAIFL--WHVDKKD  419 (666)
Q Consensus       386 ~IP~avLaaili~~~~~li~~~~~~~l--~~~~~~d  419 (666)
                      .||.++++|+.++ .++++...+++.+  .|++..+
T Consensus       328 ~IP~~vlgg~~l~-lfg~i~~~Gi~~l~~~~v~~~~  362 (429)
T 3qe7_A          328 MIPLPVMGGVSLL-LYGVIGASGIRVLIESKVDYNK  362 (429)
T ss_dssp             TSCHHHHHHHHHH-HHHHHHHHHHHHHHHTTSCTTS
T ss_pred             HccHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCC
Confidence            9999999998766 9999999999988  7777543
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Back     alignment and structure
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Back     alignment and structure
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum} Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Back     alignment and structure
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A Back     alignment and structure
>3bl4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 2.20A {Arthrobacter SP} Back     alignment and structure
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2 Back     alignment and structure
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 666
d1th8b_115 c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa 3e-13
d1vc1a_110 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 5e-13
d1h4xa_111 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 1e-08
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 64.5 bits (157), Expect = 3e-13
 Identities = 17/100 (17%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 485 GIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSA 544
            ++IVR+   +       L++++ +   +             I  ++L +  +T++DSS 
Sbjct: 11  DVLIVRLSGELDHHTAEELREQVTDVLEN-----------RAIRHIVLNLGQLTFMDSSG 59

Query: 545 VQALKDLYQEYKSRDIQIAISNLNHEVLLTLSKSGVVDLI 584
           +  +   Y++ K+   Q+ +  ++  V      SG+  +I
Sbjct: 60  LGVILGRYKQIKNVGGQMVVCAVSPAVKRLFDMSGLFKII 99
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Length = 110 Back     information, alignment and structure
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query666
d1th8b_115 Anti-sigma factor antagonist SpoIIaa {Bacillus ste 99.59
d1h4xa_111 Anti-sigma factor antagonist SpoIIaa {Bacillus sph 99.58
d1vc1a_110 Anti-sigma factor antagonist SpoIIaa {Thermotoga m 99.57
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.59  E-value=1.3e-15  Score=134.24  Aligned_cols=105  Identities=18%  Similarity=0.300  Sum_probs=96.0

Q ss_pred             ccCcEEEEEeccceeeccHHHHHHHHHHhhhhcccccCCCCCcccceEEEEEcCCCCccCHHHHHHHHHHHHHHHhCCcE
Q 005994          482 TYHGIVIVRIDAPIYFANISFLKDRLREYEVDVDRSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKSRDIQ  561 (666)
Q Consensus       482 ~~~~i~Iirl~G~L~F~na~~l~~~l~~~~~~~~~~~~~~~~~~~~~~VILDls~V~~IDsSgl~~L~~l~~~~~~~gi~  561 (666)
                      ..+++.+++++|+|+|.|++.+++.+.+....           ++.+.||+||+++++||++|++.|.++.+.++++|++
T Consensus         8 ~~~~v~vv~l~G~L~~~~~~~~~~~l~~~~~~-----------~~~~~iilDls~v~~iDssg~~~L~~~~~~~~~~g~~   76 (115)
T d1th8b_           8 VKQDVLIVRLSGELDHHTAEELREQVTDVLEN-----------RAIRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQ   76 (115)
T ss_dssp             EETTEEEEEEEEEESHHHHHHHHHHHHHHHHS-----------SCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCC
T ss_pred             EECCEEEEEEEEEEEHHHHHHHHHHHHHHHhc-----------CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCE
Confidence            34689999999999999999999999887642           2357999999999999999999999999999999999


Q ss_pred             EEEEeCChhHHHHHHhcCCccccCCeeeecCHHHHHHHH
Q 005994          562 IAISNLNHEVLLTLSKSGVVDLIGKEWYFVRAHDAVQVC  600 (666)
Q Consensus       562 v~la~~~~~v~~~L~~~Gl~~~i~~~~~f~s~~~Al~~a  600 (666)
                      ++++|+++++++.|+++|+.+.++   +|+|.++|++..
T Consensus        77 l~l~~~~~~v~~~l~~~gl~~~~~---i~~~~~~Al~~l  112 (115)
T d1th8b_          77 MVVCAVSPAVKRLFDMSGLFKIIR---VEADEQFALQAL  112 (115)
T ss_dssp             EEEESCCHHHHHHHHHHTGGGTSE---EESSHHHHHHHT
T ss_pred             EEEEECCHHHHHHHHHcCCCceeE---EeCCHHHHHHHh
Confidence            999999999999999999998884   999999999864
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure