Citrus Sinensis ID: 006009

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-----
MGSIVPFQDLNLMPSPSTAASTAAAATLPLLTPKIEPKTEPFDEPVPTHQLERGQNTPESLLSESAPGFFSNSENTPESQPPDRDNVYSEFYRISELFRTAFAKRLRKYGDVDVLDPDSRAIVTVTHQDAQLSNAVVPRTKPMKRSGELVRVTDLSAEDERYFRDVVRRTRMLYDSLRVFAVYEEEKRRGIGQGRRARGDLTASSVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccccEEccccccccccEEcHHHHHHHHHcccccccccccccccccccccccEEEEEEccccccccccccEEEEEcccccccccccccccccccccHHHHHHHccccEEEEEEcEEccccccccEEEEccEEEEEEEEEccccccccEEEEEcccccccccccccEEEcccccccccccccccccHHHHHHcccccccEEEEEcccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccEEEEEEEEccccEEEEEccccccccEEEEEEEEEEcHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEEEcccccccccccccccccccccccccccc
cccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccEcccccccccccccEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccEEccccEEEcccccEEEccEEEEEEEEEEEEccccccccccEEcccccccccEEEEEEEEccccccccccccEEEEEcccccccccccHHHcHHccccHHHHHHHcccccEEEEEEEEcccccccEEEEEccHHHHHHHHHHccccccEEEEEEEEEccccccHHHHHHHHHHHccccccccccccEEcHHHHcccccccEEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccHHHccccccccccccEEEccccEEEccccccccccccccccHHHcccccEEEEEcccccEEEEEcccEccccEEEEcccEEEEHHHHHHHHcccccEEccccccccHcccccccccccccccccccccccccEEEEHHHcccHHHEEEccccccEEEEEEEEccccccccEEEEEEccccccccEEEEEccccccccccccccc
mgsivpfqdlnlmpspstaaSTAAAatlplltpkiepktepfdepvpthqlergqntpesllsesapgffsnsentpesqppdrdnvysEFYRISELFRTAFAKRLRKygdvdvldpdsraIVTVTHqdaqlsnavvprtkpmkrsgelvrvtdlsaederYFRDVVRRTRMLYDSLRVFAVYEEEKrrgigqgrrargdltasSVMKERQLWLnrdkrivgsipgvqigDVFFFRMELLVVGLhghsqagidylpgsqsangepiatsiivsggyeddedagdvliytghggqdklsRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFryqgsvsskvyvydglykihdcwfdvgksgfgvyKYKLLRIEGQPEMGSAILRFADSlrtkplsvrpkgylsldisgkkenvpvllfndidgdyeplYYEYLVRtvfppfvftqgsngagcdcvsgctdrcfcavknggefaydhngyllrgkpvifecgafcqcpptcrnrvsqrgLRNRLEVFrsretgwgvrslDLIHAGAFICEYAGVVLTMEQAQIFsmngdsliypnrfsarwgewgdlsqvfsdymrpshpsippldfamdvSRMRNVAcyishsptpnVMVQFVLydhnnlmfpHLMLFalenipplrelsidygvadewsgklaicn
MGSIVPFQDLNLMPSPSTAASTAAAATLPLLTPKIEPKTEPFDEPVPTHQLERGQNTPESLLSESAPGFfsnsentpesqppdrdnVYSEFYRISELFRTAFAKRLRKYGDVDVLDPDSRAIVtvthqdaqlsnavvprtkpmkrsgelvrvtdlsaederyfrdvvrrtrmlydslrvfavyeeekrrgigqgrrargdltassvMKERQLwlnrdkrivgsipGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADslrtkplsvrpkgylsldisgkkenvPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPptcrnrvsqrglrnrlevfrsretgwgvrSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN
MGSIVPFQDLNLMpspstaastaaaatlplltpKIEPKTEPFDEPVPTHQLERGQNTPESLLSESAPGFFSNSENTPESQPPDRDNVYSEFYRISELFRTAFAKRLRKYGDVDVLDPDSRAIVTVTHQDAQLSNAVVPRTKPMKRSGELVRVTDLSAEDERYFRDVVRRTRMLYDSLRVFAVYEEEKrrgigqgrrargDLTASSVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN
**************************************************************************************VYSEFYRISELFRTAFAKRLRKYGDVDVLDPDSRAIVTVTHQDA******************LVRVTDLSAEDERYFRDVVRRTRMLYDSLRVFAVYEEE*******************VMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPG*******PIATSIIVSGGYEDDEDAGDVLIYTGHGG***************GNLAMERSMHYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAI**
**SIVPFQDLNLMP*****************TPK*************************************************************************************************************************************RRTRMLYDSLRVFA***********************SVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQ**************GNLAMERSMHYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSD*********PPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN
MGSIVPFQDLNLMPSPSTAASTAAAATLPLLTPKIEPKTEPFD****************SLLSESAPGF***************DNVYSEFYRISELFRTAFAKRLRKYGDVDVLDPDSRAIVTVTHQDAQLSNAVVPRTKPMKRSGELVRVTDLSAEDERYFRDVVRRTRMLYDSLRVFAVYEEEKRRGIGQGRRARGDLTASSVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN
*********L******************************************************************************************************************************************************RYFRDVVRRTRMLYDSLRVFAVYEEEKRRG***GRRARGDLTASSVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN
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SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
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MGSIVPFQDLNLMPSPSTAASTAAAATLPLLTPKIEPKTEPFDEPVPTHQLERGQNTPESLLSESAPGFFSNSENTPESQPPDRDNVYSEFYRISELFRTAFAKRLRKYGDVDVLDPDSRAIVTVTHQDAQLSNAVVPRTKPMKRSGELVRVTDLSAEDERYFRDVVRRTRMLYDSLRVFAVYEEEKRRGIGQGRRARGDLTASSVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query665 2.2.26 [Sep-21-2011]
Q9T0G7650 Probable histone-lysine N yes no 0.932 0.953 0.629 0.0
O22781651 Histone-lysine N-methyltr no no 0.954 0.975 0.593 0.0
Q9FF80670 Histone-lysine N-methyltr no no 0.774 0.768 0.391 1e-93
Q93YF5704 Histone-lysine N-methyltr N/A no 0.909 0.859 0.344 1e-90
O82175794 Histone-lysine N-methyltr no no 0.670 0.561 0.383 1e-87
Q8VZ17790 Histone-lysine N-methyltr no no 0.706 0.594 0.377 4e-85
Q9C5P4669 Histone-lysine N-methyltr no no 0.633 0.629 0.388 4e-83
Q8GZB6624 Histone-lysine N-methyltr no no 0.690 0.735 0.373 5e-78
Q9C5P0755 Histone-lysine N-methyltr no no 0.736 0.649 0.333 7e-69
Q9C5P1693 Histone-lysine N-methyltr no no 0.705 0.676 0.323 7e-68
>sp|Q9T0G7|SUVH9_ARATH Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=2 SV=1 Back     alignment and function desciption
 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/650 (62%), Positives = 501/650 (77%), Gaps = 30/650 (4%)

Query: 32  TPKIEPKTEPFDEPVPTHQLERGQNTPESLLSESAPGFFSNSENTPESQPPDRDNVYSEF 91
           +P + PK EP  E       +     P++L+S +   F   +E T         +  S++
Sbjct: 15  SPSLIPKLEPVTESTQNLAFQLPNTNPQALISSAVSDF---NEAT---------DFSSDY 62

Query: 92  YRISELFRTAFAKRLRKYGDVDVLDPDSRAIVTV-----------THQDAQLSNAVVPRT 140
             ++E  R+AFA+RL+++ DV VLD  + AIV V           +  D+  S A   R 
Sbjct: 63  NTVAESARSAFAQRLQRHDDVAVLDSLTGAIVPVEENPEPEPNPYSTSDSSPSVAT-QRP 121

Query: 141 KPMKRSGELVRVTDLSAEDERYFRDVVRRTRMLYDSLRVFAVYEEEKRRGIGQGRRARGD 200
           +P  RS ELVR+TD+  E ER FR+ VR+TRM+YDSLR+F + EE KR G+G GRRAR D
Sbjct: 122 RPQPRSSELVRITDVGPESERQFREHVRKTRMIYDSLRMFLMMEEAKRNGVG-GRRARAD 180

Query: 201 LTAS---SVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPG 257
             A    S+M++  LW+NRDKRIVGSIPGVQ+GD+FFFR EL V+GLHGH Q+GID+L G
Sbjct: 181 GKAGKAGSMMRDCMLWMNRDKRIVGSIPGVQVGDIFFFRFELCVMGLHGHPQSGIDFLTG 240

Query: 258 SQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSM 317
           S S+NGEPIATS+IVSGGYEDD+D GDV++YTG GGQD+L RQ EHQ+LEGGNLAMERSM
Sbjct: 241 SLSSNGEPIATSVIVSGGYEDDDDQGDVIMYTGQGGQDRLGRQAEHQRLEGGNLAMERSM 300

Query: 318 HYGIEVRVIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMG 377
           +YGIEVRVIRG +Y+  VSS+VYVYDGL++I D WFDVGKSGFGV+KY+L RIEGQ EMG
Sbjct: 301 YYGIEVRVIRGLKYENEVSSRVYVYDGLFRIVDSWFDVGKSGFGVFKYRLERIEGQAEMG 360

Query: 378 SAILRFADSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFP 437
           S++L+FA +L+T PLSVRP+GY++ DIS  KENVPV LFNDID D EPLYYEYL +T FP
Sbjct: 361 SSVLKFARTLKTNPLSVRPRGYINFDISNGKENVPVYLFNDIDSDQEPLYYEYLAQTSFP 420

Query: 438 PFVFTQGS-NGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPP 496
           P +F Q S N +GCDCV+GC   C C  KN GE AYD+NG L+R KP+I ECG+ CQCPP
Sbjct: 421 PGLFVQQSGNASGCDCVNGCGSGCLCEAKNSGEIAYDYNGTLIRQKPLIHECGSACQCPP 480

Query: 497 TCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGD 556
           +CRNRV+Q+GLRNRLEVFRS ETGWGVRSLD++HAGAFICEYAGV LT EQA I +MNGD
Sbjct: 481 SCRNRVTQKGLRNRLEVFRSLETGWGVRSLDVLHAGAFICEYAGVALTREQANILTMNGD 540

Query: 557 SLIYPNRF-SARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPN 615
           +L+YP RF SARW +WGDLSQV +D+ RPS+P IPP+DFAMDVS+MRNVACYISHS  PN
Sbjct: 541 TLVYPARFSSARWEDWGDLSQVLADFERPSYPDIPPVDFAMDVSKMRNVACYISHSTDPN 600

Query: 616 VMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN 665
           V+VQFVL+DHN+LMFP +MLFA ENIPP+ ELS+DYGV D+W+ KLAICN
Sbjct: 601 VIVQFVLHDHNSLMFPRVMLFAAENIPPMTELSLDYGVVDDWNAKLAICN 650
Histone methyltransferase. Methylates 'Lys-9' of histone H3. H3 'Lys-9' methylation represents a specific tag for epigenetic transcriptional repression.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3
>sp|O22781|SUVH2_ARATH Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2 OS=Arabidopsis thaliana GN=SUVH2 PE=1 SV=1 Back     alignment and function description
>sp|Q9FF80|SUVH1_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1 Back     alignment and function description
>sp|Q93YF5|SUVH1_TOBAC Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1 Back     alignment and function description
>sp|O82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=1 SV=1 Back     alignment and function description
>sp|Q8VZ17|SUVH6_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2 Back     alignment and function description
>sp|Q9C5P4|SUVH3_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2 Back     alignment and function description
>sp|Q8GZB6|SUVH4_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2 Back     alignment and function description
>sp|Q9C5P0|SUVH8_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 OS=Arabidopsis thaliana GN=SUVH8 PE=3 SV=1 Back     alignment and function description
>sp|Q9C5P1|SUVH7_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query665
449432488695 PREDICTED: probable histone-lysine N-met 0.995 0.952 0.720 0.0
225433302672 PREDICTED: histone-lysine N-methyltransf 0.983 0.973 0.718 0.0
147859819653 hypothetical protein VITISV_004293 [Viti 0.954 0.972 0.698 0.0
224110658519 SET domain-containing protein [Populus t 0.780 1.0 0.815 0.0
297790484650 hypothetical protein ARALYDRAFT_332974 [ 0.933 0.955 0.642 0.0
356523366709 PREDICTED: probable histone-lysine N-met 0.948 0.889 0.606 0.0
15236295650 putative histone-lysine N-methyltransfer 0.932 0.953 0.629 0.0
356576995716 PREDICTED: probable histone-lysine N-met 0.935 0.868 0.606 0.0
224102253453 hypothetical protein POPTRDRAFT_419224 [ 0.681 1.0 0.843 0.0
297823125654 hypothetical protein ARALYDRAFT_902401 [ 0.957 0.974 0.601 0.0
>gi|449432488|ref|XP_004134031.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform 1 [Cucumis sativus] gi|449432490|ref|XP_004134032.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform 2 [Cucumis sativus] gi|449487488|ref|XP_004157651.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform 1 [Cucumis sativus] gi|449487490|ref|XP_004157652.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
 Score = 1032 bits (2669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/698 (72%), Positives = 576/698 (82%), Gaps = 36/698 (5%)

Query: 1   MGSIVPFQDLNLMPSPSTAASTAAAA-----------------TLPLLTPKIEPKTEPFD 43
           M S +PFQDLNL+P PS+ A   AA                  T  LLTPK+EPK EPFD
Sbjct: 1   MDSPIPFQDLNLLPDPSSTAVMTAATSPKTATGINSSFNKFVDTGKLLTPKLEPKLEPFD 60

Query: 44  EPVPTHQLERGQNTPESLLSESAPGFFSNSE--NTP---ESQPP---------DRDNVYS 89
           +   T + ++ Q+  +  LS  +  FFSN++   TP   ++  P         D+DNVYS
Sbjct: 61  DLFETRESQQPQSVQQPFLSTPSSNFFSNTDFSQTPFSDQNHTPLSQSSSISSDKDNVYS 120

Query: 90  EFYRISELFRTAFAKRLRKYGDVDV--LDPDSRAIVTVTHQDAQLSNAVVPRTKPMKRSG 147
           EFYRIS+LFR+AF K L+ YGD DV  +DPD++AIV V  ++ Q+S  VV + +  KRS 
Sbjct: 121 EFYRISQLFRSAFGKGLQSYGDADVEVVDPDAQAIVPVPEEN-QISTVVVSKRRYDKRSS 179

Query: 148 ELVRVTDLSAEDERYFRDVVRRTRMLYDSLRVFAVYEEEKRRGIGQGRRARGDLTASSVM 207
           ELVRVTDL  ED+RYFRDVVRRTRM++DSLRV +  EEEK  G+   RR RGDL ASS+M
Sbjct: 180 ELVRVTDLGVEDQRYFRDVVRRTRMIFDSLRVLSTAEEEKSPGLM--RRLRGDLRASSLM 237

Query: 208 KERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIA 267
           +ER LWLNRDKRIVGSIPGV IGD+FFFRMEL VVGLHG +QAGIDY+P SQS+NGEPIA
Sbjct: 238 RERGLWLNRDKRIVGSIPGVHIGDLFFFRMELCVVGLHGQAQAGIDYVPASQSSNGEPIA 297

Query: 268 TSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIR 327
           TSIIVSGGYEDDEDAGD++IYTGHGGQDK S+QC HQKLEGGNLA+ERSMHYGIEVRVIR
Sbjct: 298 TSIIVSGGYEDDEDAGDMIIYTGHGGQDKFSKQCMHQKLEGGNLALERSMHYGIEVRVIR 357

Query: 328 GFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFADSL 387
           G +Y GSV+SK+YVYDGLY+I DCWFDVGKSGFGVYKYKLLRI+GQ EMGS+IL+FA++L
Sbjct: 358 GMKYAGSVASKIYVYDGLYRILDCWFDVGKSGFGVYKYKLLRIDGQAEMGSSILKFAENL 417

Query: 388 RTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNG 447
           RTKPLS+RP GYLSLDIS KKE VPVLLFNDID D EPLYYEYLVRTVFPPF F Q  +G
Sbjct: 418 RTKPLSLRPSGYLSLDISMKKEAVPVLLFNDIDNDQEPLYYEYLVRTVFPPFAFHQSGSG 477

Query: 448 AGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVSQRGL 507
            GC CV+ C   CFCA+KNGGEF YD NG+L+RGKP+IFECG FCQCPP CRNRVSQ+GL
Sbjct: 478 TGCSCVTSCVHDCFCAMKNGGEFGYDQNGFLVRGKPIIFECGPFCQCPPQCRNRVSQKGL 537

Query: 508 RNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSAR 567
           ++RLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLT EQAQ+FSMNGD+LIYPNRFS R
Sbjct: 538 KHRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTREQAQVFSMNGDTLIYPNRFSDR 597

Query: 568 WGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNN 627
           W EWGDLSQ++S+Y+RPS+PS+PPLDFAMDVSRMRNVACYISHS +PNV+VQFVLYDHNN
Sbjct: 598 WAEWGDLSQIYSNYVRPSYPSVPPLDFAMDVSRMRNVACYISHSTSPNVLVQFVLYDHNN 657

Query: 628 LMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN 665
           LMFPHLMLFA+ENIPPLRELSIDYGVAD+WSGKLAICN
Sbjct: 658 LMFPHLMLFAMENIPPLRELSIDYGVADDWSGKLAICN 695

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225433302|ref|XP_002282386.1| PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147859819|emb|CAN81444.1| hypothetical protein VITISV_004293 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224110658|ref|XP_002315593.1| SET domain-containing protein [Populus trichocarpa] gi|222864633|gb|EEF01764.1| SET domain-containing protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297790484|ref|XP_002863127.1| hypothetical protein ARALYDRAFT_332974 [Arabidopsis lyrata subsp. lyrata] gi|297308961|gb|EFH39386.1| hypothetical protein ARALYDRAFT_332974 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356523366|ref|XP_003530311.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like [Glycine max] Back     alignment and taxonomy information
>gi|15236295|ref|NP_193082.1| putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 [Arabidopsis thaliana] gi|79325081|ref|NP_001031625.1| putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 [Arabidopsis thaliana] gi|30580529|sp|Q9T0G7.1|SUVH9_ARATH RecName: Full=Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9; AltName: Full=Histone H3-K9 methyltransferase 9; Short=H3-K9-HMTase 9; AltName: Full=Protein SET DOMAIN GROUP 22; AltName: Full=Suppressor of variegation 3-9 homolog protein 9; Short=Su(var)3-9 homolog protein 9 gi|13517759|gb|AAK28974.1|AF344452_1 SUVH9 [Arabidopsis thaliana] gi|4678372|emb|CAB41104.1| putative protein [Arabidopsis thaliana] gi|7268049|emb|CAB78388.1| putative protein [Arabidopsis thaliana] gi|222424024|dbj|BAH19973.1| AT4G13460 [Arabidopsis thaliana] gi|332657882|gb|AEE83282.1| putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 [Arabidopsis thaliana] gi|332657883|gb|AEE83283.1| putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356576995|ref|XP_003556615.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like [Glycine max] Back     alignment and taxonomy information
>gi|224102253|ref|XP_002312611.1| hypothetical protein POPTRDRAFT_419224 [Populus trichocarpa] gi|222852431|gb|EEE89978.1| hypothetical protein POPTRDRAFT_419224 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297823125|ref|XP_002879445.1| hypothetical protein ARALYDRAFT_902401 [Arabidopsis lyrata subsp. lyrata] gi|297325284|gb|EFH55704.1| hypothetical protein ARALYDRAFT_902401 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query665
TAIR|locus:2140827650 SUVH9 "SU(VAR)3-9 homolog 9" [ 0.927 0.949 0.620 3.6e-215
TAIR|locus:2051083651 SUVH2 "SU(VAR)3-9 homolog 2" [ 0.954 0.975 0.578 8.8e-205
TAIR|locus:2175289670 SUVH1 "SU(VAR)3-9 homolog 1" [ 0.778 0.773 0.390 2.8e-89
TAIR|locus:2063384794 SUVH5 "SU(VAR)3-9 homolog 5" [ 0.581 0.487 0.386 1.3e-84
TAIR|locus:2032592669 SUVH3 "SU(VAR)3-9 homolog 3" [ 0.661 0.657 0.380 2e-79
TAIR|locus:2065988790 SUVH6 "SU(VAR)3-9 homolog 6" [ 0.663 0.558 0.392 6.8e-79
TAIR|locus:2159133624 SUVH4 "SU(VAR)3-9 homolog 4" [ 0.652 0.695 0.386 9.3e-75
TAIR|locus:2030953693 SUVH7 "SU(VAR)3-9 homolog 7" [ 0.667 0.640 0.346 4.5e-66
TAIR|locus:2047266755 SDG21 "SET domain group 21" [A 0.494 0.435 0.400 5.9e-57
TAIR|locus:2064676312 SDG11 "SET domain protein 11" 0.285 0.608 0.333 7.3e-31
TAIR|locus:2140827 SUVH9 "SU(VAR)3-9 homolog 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2079 (736.9 bits), Expect = 3.6e-215, P = 3.6e-215
 Identities = 399/643 (62%), Positives = 488/643 (75%)

Query:    37 PKTEPFDEPVPTHQLERGQNTPESLLSESAPGFFSNSENTPESQPPDRDNVYSEFYRISE 96
             PK EP  E       +     P++L+S +   F   +E T  S         S++  ++E
Sbjct:    20 PKLEPVTESTQNLAFQLPNTNPQALISSAVSDF---NEATDFS---------SDYNTVAE 67

Query:    97 LFRTAFAKRLRKYGDVDVLDPDSRAIVTVT---------HQDAQLSNAVVP-RTKPMKRS 146
               R+AFA+RL+++ DV VLD  + AIV V          +  +  S +V   R +P  RS
Sbjct:    68 SARSAFAQRLQRHDDVAVLDSLTGAIVPVEENPEPEPNPYSTSDSSPSVATQRPRPQPRS 127

Query:   147 GELVRVTDLSAEDERYFRDVVRRTRMLYDSLRVFAVYEEEKXXXXXXXXXXXXDLT--AS 204
              ELVR+TD+  E ER FR+ VR+TRM+YDSLR+F + EE K                 A 
Sbjct:   128 SELVRITDVGPESERQFREHVRKTRMIYDSLRMFLMMEEAKRNGVGGRRARADGKAGKAG 187

Query:   205 SVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGE 264
             S+M++  LW+NRDKRIVGSIPGVQ+GD+FFFR EL V+GLHGH Q+GID+L GS S+NGE
Sbjct:   188 SMMRDCMLWMNRDKRIVGSIPGVQVGDIFFFRFELCVMGLHGHPQSGIDFLTGSLSSNGE 247

Query:   265 PIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVR 324
             PIATS+IVSGGYEDD+D GDV++YTG GGQD+L RQ EHQ+LEGGNLAMERSM+YGIEVR
Sbjct:   248 PIATSVIVSGGYEDDDDQGDVIMYTGQGGQDRLGRQAEHQRLEGGNLAMERSMYYGIEVR 307

Query:   325 VIRGFRYQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAILRFA 384
             VIRG +Y+  VSS+VYVYDGL++I D WFDVGKSGFGV+KY+L RIEGQ EMGS++L+FA
Sbjct:   308 VIRGLKYENEVSSRVYVYDGLFRIVDSWFDVGKSGFGVFKYRLERIEGQAEMGSSVLKFA 367

Query:   385 DSLRTKPLSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQG 444
              +L+T PLSVRP+GY++ DIS  KENVPV LFNDID D EPLYYEYL +T FPP +F Q 
Sbjct:   368 RTLKTNPLSVRPRGYINFDISNGKENVPVYLFNDIDSDQEPLYYEYLAQTSFPPGLFVQQ 427

Query:   445 S-NGAGCDCVSGCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGAFCQCPPTCRNRVS 503
             S N +GCDCV+GC   C C  KN GE AYD+NG L+R KP+I ECG+ CQCPP+CRNRV+
Sbjct:   428 SGNASGCDCVNGCGSGCLCEAKNSGEIAYDYNGTLIRQKPLIHECGSACQCPPSCRNRVT 487

Query:   504 QRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNR 563
             Q+GLRNRLEVFRS ETGWGVRSLD++HAGAFICEYAGV LT EQA I +MNGD+L+YP R
Sbjct:   488 QKGLRNRLEVFRSLETGWGVRSLDVLHAGAFICEYAGVALTREQANILTMNGDTLVYPAR 547

Query:   564 FS-ARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVL 622
             FS ARW +WGDLSQV +D+ RPS+P IPP+DFAMDVS+MRNVACYISHS  PNV+VQFVL
Sbjct:   548 FSSARWEDWGDLSQVLADFERPSYPDIPPVDFAMDVSKMRNVACYISHSTDPNVIVQFVL 607

Query:   623 YDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWSGKLAICN 665
             +DHN+LMFP +MLFA ENIPP+ ELS+DYGV D+W+ KLAICN
Sbjct:   608 HDHNSLMFPRVMLFAAENIPPMTELSLDYGVVDDWNAKLAICN 650
GO:0005634 "nucleus" evidence=ISM;IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0018024 "histone-lysine N-methyltransferase activity" evidence=IEA
GO:0034968 "histone lysine methylation" evidence=IEA
GO:0042393 "histone binding" evidence=IEA
GO:0009294 "DNA mediated transformation" evidence=IMP
TAIR|locus:2051083 SUVH2 "SU(VAR)3-9 homolog 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175289 SUVH1 "SU(VAR)3-9 homolog 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063384 SUVH5 "SU(VAR)3-9 homolog 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032592 SUVH3 "SU(VAR)3-9 homolog 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065988 SUVH6 "SU(VAR)3-9 homolog 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159133 SUVH4 "SU(VAR)3-9 homolog 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030953 SUVH7 "SU(VAR)3-9 homolog 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2047266 SDG21 "SET domain group 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064676 SDG11 "SET domain protein 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9T0G7SUVH9_ARATH2, ., 1, ., 1, ., 4, 30.62920.93230.9538yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.1.430.946
3rd Layer2.1.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query665
smart00466155 smart00466, SRA, SET and RING finger associated do 2e-79
pfam02182154 pfam02182, YDG_SRA, YDG/SRA domain 6e-78
pfam05033103 pfam05033, Pre-SET, Pre-SET motif 6e-27
smart00317124 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest 6e-25
smart0046898 smart00468, PreSET, N-terminal to some SET domains 1e-24
pfam00856113 pfam00856, SET, SET domain 2e-17
COG2940480 COG2940, COG2940, Proteins containing SET domain [ 3e-07
>gnl|CDD|197742 smart00466, SRA, SET and RING finger associated domain Back     alignment and domain information 
 Score =  248 bits (636), Expect = 2e-79
 Identities = 94/158 (59%), Positives = 115/158 (72%), Gaps = 4/158 (2%)

Query: 217 DKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGY 276
            KRI G +PGV++GD+FF+R+EL +VGLH  +QAGID L   +S  GEP ATS++ SGGY
Sbjct: 1   MKRIFGPVPGVEVGDIFFYRVELCLVGLHRPTQAGIDGL---ESDEGEPGATSVVSSGGY 57

Query: 277 EDDEDAGDVLIYTGHGGQDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFR-YQGSV 335
           EDD D GDVLIYTG GG+D    Q E QKLE GNLA+E S   GI VRV+RG + Y    
Sbjct: 58  EDDTDDGDVLIYTGQGGRDMTHGQPEDQKLERGNLALEASCRKGIPVRVVRGMKGYSKYA 117

Query: 336 SSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQ 373
             K Y+YDGLY+I D W +VGKSGF V+K+KL+RI GQ
Sbjct: 118 PGKGYIYDGLYRIVDYWREVGKSGFLVFKFKLVRIPGQ 155

Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. Length = 155
>gnl|CDD|216920 pfam02182, YDG_SRA, YDG/SRA domain Back     alignment and domain information
>gnl|CDD|218393 pfam05033, Pre-SET, Pre-SET motif Back     alignment and domain information
>gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information
>gnl|CDD|128744 smart00468, PreSET, N-terminal to some SET domains Back     alignment and domain information
>gnl|CDD|216155 pfam00856, SET, SET domain Back     alignment and domain information
>gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 665
smart00466155 SRA SET and RING finger associated domain. Domain 100.0
PF02182155 SAD_SRA: SAD/SRA domain; InterPro: IPR003105 This 100.0
KOG1082364 consensus Histone H3 (Lys9) methyltransferase SUV3 100.0
KOG4442 729 consensus Clathrin coat binding protein/Huntingtin 100.0
KOG1141 1262 consensus Predicted histone methyl transferase [Ch 100.0
KOG1079739 consensus Transcriptional repressor EZH1 [Transcri 99.95
KOG10801005 consensus Histone H3 (Lys4) methyltransferase comp 99.91
smart00317116 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) 99.88
KOG10831306 consensus Putative transcription factor ASH1/LIN-5 99.86
PF05033103 Pre-SET: Pre-SET motif; InterPro: IPR007728 This r 99.83
smart0046898 PreSET N-terminal to some SET domains. A Cys-rich 99.81
KOG1085392 consensus Predicted methyltransferase (contains a 99.65
COG2940480 Proteins containing SET domain [General function p 99.52
PF00856162 SET: SET domain; InterPro: IPR001214 The SET domai 99.37
KOG11411262 consensus Predicted histone methyl transferase [Ch 98.88
KOG1081463 consensus Transcription factor NSD1 and related SE 98.8
KOG2589 453 consensus Histone tail methylase [Chromatin struct 98.17
KOG2461 396 consensus Transcription factor BLIMP-1/PRDI-BF1, c 97.61
smart0057051 AWS associated with SET domains. subdomain of PRES 96.78
COG3440301 Predicted restriction endonuclease [Defense mechan 94.91
KOG2084 482 consensus Predicted histone tail methylase contain 85.06
>smart00466 SRA SET and RING finger associated domain Back     alignment and domain information 
Probab=100.00  E-value=2.3e-58  Score=440.44  Aligned_cols=153  Identities=60%  Similarity=1.000  Sum_probs=145.3

Q ss_pred             CCeeccCCCcccCceechHhhhhhhccCcCCCCCccccCCCCCCCCCCcEEEEEEcCCcCCCCCCCCeEEEEecCCCCCC
Q 006009          218 KRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKL  297 (665)
Q Consensus       218 ~~i~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GI~~~~~~~~~~g~~~A~SIV~SggY~dd~D~gd~liYtG~GG~~~~  297 (665)
                      +++||+||||+|||+|++|+||+++|||+++|+|||+++.+   +++++|+|||+||||+||+|+||+|+|||+||++..
T Consensus         2 ~~~~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GI~~~~~~---~~~~~A~SIV~SggYedd~D~gd~liYtG~gg~~~~   78 (155)
T smart00466        2 KHIFGPVPGVEVGDIFFFRVELCLVGLHRPTQAGIDGLTAD---EGEPGATSVVSSGGYEDDTDDGDVLIYTGQGGRDMT   78 (155)
T ss_pred             CceEeCCCCccCCCEEcchhHhhhhcccCcccCCccccccc---CCCccEEEEEECCCccCcccCCCEEEEEccCCccCC
Confidence            45689999999999999999999999999999999998653   788999999999999999999999999999999988


Q ss_pred             CccccCcccchhhHHHHHhhhcCceeEEEecccc-CCCCcceeeEecCeEEEEEeEeecCCCcceEEEEEEEeecCC
Q 006009          298 SRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFRY-QGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQ  373 (665)
Q Consensus       298 ~~~~~dQ~l~~gNlAL~~S~~~~~pVRViRg~k~-~~~~~~~~yrYDGLY~V~~~w~e~g~~G~~v~kf~L~R~~gQ  373 (665)
                      ++|..||+|++||+||++||++++|||||||++. ....|.++|||||||+|+++|.|+|++||.||||+|+|+|||
T Consensus        79 ~~~~~dQkl~~gNlAL~~S~~~~~PVRViRg~~~~~~~~p~~gyrYDGLY~V~~~w~e~g~~G~~v~kfkL~R~~gQ  155 (155)
T smart00466       79 HGQPEDQKLERGNLALEASCRKGIPVRVVRGMKGYSKYAPGKGYIYDGLYRIVDYWREVGKSGFLVFKFKLVRIPGQ  155 (155)
T ss_pred             CCCccccEecchhHHHHHHHhcCCceEEEccccccCCCCCCCeEEECcEEEEEEEEEecCCCCcEEEEEEEEeCCCC
Confidence            8999999999999999999999999999999995 344599999999999999999999999999999999999998

Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. Domain in SET domain containing proteins and in Deinococcus radiodurans DRA1533.
>PF02182 SAD_SRA: SAD/SRA domain; InterPro: IPR003105 This domain has been termed SRA-YDG, for SET and Ring finger Associated, and because of the conserved YDG motif within the domain Back     alignment and domain information
>KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1079 consensus Transcriptional repressor EZH1 [Transcription] Back     alignment and domain information
>KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Back     alignment and domain information
>KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] Back     alignment and domain information
>PF05033 Pre-SET: Pre-SET motif; InterPro: IPR007728 This region is found in a number of histone lysine methyltransferases (HMTase), N-terminal to the SET domain; it is generally described as the pre-SET domain Back     alignment and domain information
>smart00468 PreSET N-terminal to some SET domains Back     alignment and domain information
>KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] Back     alignment and domain information
>COG2940 Proteins containing SET domain [General function prediction only] Back     alignment and domain information
>PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco Back     alignment and domain information
>KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] Back     alignment and domain information
>KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] Back     alignment and domain information
>KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] Back     alignment and domain information
>smart00570 AWS associated with SET domains Back     alignment and domain information
>COG3440 Predicted restriction endonuclease [Defense mechanisms] Back     alignment and domain information
>KOG2084 consensus Predicted histone tail methylase containing SET domain [Chromatin structure and dynamics] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query665
3q0c_X167 Crystal Structure Of Suvh5 Sra-Fully Methylated Cg 5e-35
3q0b_X167 Crystal Structure Of Suvh5 Sra- Fully Methylated Cg 7e-34
3k5k_A283 Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin 1e-24
2o8j_A281 Human Euchromatic Histone Methyltransferase 2 Lengt 1e-24
3hna_A287 Crystal Structure Of Catalytic Domain Of Human Euch 2e-24
2igq_A285 Human Euchromatic Histone Methyltransferase 1 Lengt 3e-24
3fpd_A261 G9a-Like Protein Lysine Methyltransferase Inhibitio 5e-24
1mvh_A299 Structure Of The Set Domain Histone Lysine Methyltr 2e-23
4i51_A286 Methyltransferase Domain Of Human Euchromatic Histo 2e-23
3bo5_A290 Crystal Structure Of Methyltransferase Domain Of Hu 9e-20
2r3a_A300 Methyltransferase Domain Of Human Suppressor Of Var 1e-19
3f8j_B212 Mouse Uhrf1 Sra Domain Bound With Hemi-methylated C 1e-17
2zo0_B212 Mouse Np95 Sra Domain Dna Specific Complex 1 Length 1e-17
2zkd_A210 Crystal Structure Of The Sra Domain Of Mouse Np95 I 3e-17
2pb7_A239 Crystal Structure Of The Sra Domain Of The Human Uh 3e-16
3clz_A212 The Set And Ring Associated (Sra) Domain Of Uhrf1 B 4e-16
3dwh_A208 Structural And Functional Analysis Of Sra Domain Le 6e-16
3bi7_A212 Crystal Structure Of The Sra Domain Of E3 Ubiquitin 9e-16
1ml9_A302 Structure Of The Neurospora Set Domain Protein Dim- 5e-14
3oln_A231 Crystal Structure Of The Sra Domain Of E3 Ubiquitin 7e-11
3ope_A222 Structural Basis Of Auto-Inhibitory Mechanism Of Hi 1e-08
4fmu_A278 Crystal Structure Of Methyltransferase Domain Of Hu 3e-06
3ooi_A232 Crystal Structure Of Human Histone-Lysine N-Methylt 4e-05
>pdb|3Q0C|X Chain X, Crystal Structure Of Suvh5 Sra-Fully Methylated Cg Dna Complex In Space Group P6122 Length = 167 Back     alignment and structure 
Iteration: 1

 Score =  145 bits (367), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 79/164 (48%), Positives = 110/164 (67%), Gaps = 9/164 (5%)
Query: 219 RIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYED 278
           +I+G++PGV++GD F +RMEL ++G+H  SQ+GIDY+   +   GE +ATSI+ SGGY D
Sbjct: 1   QIIGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYM---KDDGGELVATSIVSSGGYND 57
Query: 279 DEDAGDVLIYTGHGG---QDKLSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFR---YQ 332
             D  DVLIYTG GG   + K +   + Q+L  GNLA++ S++    VRVIRG +    Q
Sbjct: 58  VLDNSDVLIYTGQGGNVGKKKNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQ 117
Query: 333 GSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEGQPEM 376
            SV +K YVYDGLY + + W + G  G  V+K+KL RI GQPE+
Sbjct: 118 SSVVAKNYVYDGLYLVEEYWEETGSHGKLVFKFKLRRIPGQPEL 161
>pdb|3Q0B|X Chain X, Crystal Structure Of Suvh5 Sra- Fully Methylated Cg Dna Complex In Space Group P42212 Length = 167 Back     alignment and structure
>pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 Back     alignment and structure
>pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 Back     alignment and structure
>pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 Back     alignment and structure
>pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 Back     alignment and structure
>pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 Back     alignment and structure
>pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 Back     alignment and structure
>pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 Back     alignment and structure
>pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 Back     alignment and structure
>pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 Back     alignment and structure
>pdb|3F8J|B Chain B, Mouse Uhrf1 Sra Domain Bound With Hemi-methylated Cpg, Crystal Structure In Space Group C222(1) Length = 212 Back     alignment and structure
>pdb|2ZO0|B Chain B, Mouse Np95 Sra Domain Dna Specific Complex 1 Length = 212 Back     alignment and structure
>pdb|2ZKD|A Chain A, Crystal Structure Of The Sra Domain Of Mouse Np95 In Complex With Hemi-Methylated Cpg Dna Length = 210 Back     alignment and structure
>pdb|2PB7|A Chain A, Crystal Structure Of The Sra Domain Of The Human Uhrf1 Protein Length = 239 Back     alignment and structure
>pdb|3CLZ|A Chain A, The Set And Ring Associated (Sra) Domain Of Uhrf1 Bound To Methylated Dna Length = 212 Back     alignment and structure
>pdb|3DWH|A Chain A, Structural And Functional Analysis Of Sra Domain Length = 208 Back     alignment and structure
>pdb|3BI7|A Chain A, Crystal Structure Of The Sra Domain Of E3 Ubiquitin-Protein Ligase Uhrf1 Length = 212 Back     alignment and structure
>pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 Back     alignment and structure
>pdb|3OLN|A Chain A, Crystal Structure Of The Sra Domain Of E3 Ubiquitin-Protein Ligase Uhrf2 Length = 231 Back     alignment and structure
>pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 Back     alignment and structure
>pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 Back     alignment and structure
>pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query665
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 7e-80
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 6e-73
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 4e-69
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 3e-68
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 2e-65
2pb7_A239 E3 ubiquitin-protein ligase UHRF1; beta barrel, NE 2e-60
3fde_A212 E3 ubiquitin-protein ligase UHRF1; SRA domain, bas 7e-60
3oln_A231 E3 ubiquitin-protein ligase UHRF2; DNA-binding, me 2e-58
3q0b_X167 Histone-lysine N-methyltransferase, H3 lysine-9 S 2e-56
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 5e-39
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 5e-37
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 2e-33
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 1e-18
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 6e-15
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 9e-12
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 5e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 7e-07
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 1e-05
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 2e-05
3dal_A196 PR domain zinc finger protein 1; methyltransferase 1e-04
3db5_A151 PR domain zinc finger protein 4; methyltransferase 2e-04
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 3e-04
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 Back     alignment and structure
 Score =  254 bits (651), Expect = 7e-80
 Identities = 81/278 (29%), Positives = 121/278 (43%), Gaps = 30/278 (10%)

Query: 392 LSVRPKGYLSLDISGKKENVPVLLFNDIDGDYEP-LYYEYLVRTVFPPFVFTQGSN-GAG 449
           LS   K  L      + E   V L N++D +  P L ++++ +      V     N  +G
Sbjct: 9   LSFYEKRELFRKKLREIEGPEVTLVNEVDDEPCPSLDFQFISQYRLTQGVIPPDPNFQSG 68

Query: 450 CDCVS------GCTDRCFCA--VKNGGEFAYDHNGYLL-RGKPVIFECGAFCQCPPTCRN 500
           C+C S          RC C   +     FAYD  G +      VI+EC +FC C   C N
Sbjct: 69  CNCSSLGGCDLNNPSRCECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPN 128

Query: 501 RVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIY 560
           RV QRG    LE+F+++E GWGVRSL    AG FI  Y G V+T  +A     N D    
Sbjct: 129 RVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGI 188

Query: 561 PNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQF 620
              F     +                      ++ +D     +V+ + +HS +PN+ +  
Sbjct: 189 TYLFDLDMFDDAS-------------------EYTVDAQNYGDVSRFFNHSCSPNIAIYS 229

Query: 621 VLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWS 658
            + +H       L  FA+++I PL EL+ DY  A ++S
Sbjct: 230 AVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFS 267
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 Back     alignment and structure
>2pb7_A E3 ubiquitin-protein ligase UHRF1; beta barrel, NEW fold; 1.90A {Homo sapiens} SCOP: b.122.1.12 Length = 239 Back     alignment and structure
>3fde_A E3 ubiquitin-protein ligase UHRF1; SRA domain, base flipping, DNA CPG methylation, cell cycle, developmental protein, DNA damage; HET: 5CM; 1.41A {Mus musculus} PDB: 2zo0_B* 2zo2_B* 3f8i_A* 2zo1_B* 3f8j_B* 2zkd_A* 2zke_A* 2zkf_A* 2zkg_A 3dwh_A 3bi7_A 3clz_A* Length = 212 Back     alignment and structure
>3oln_A E3 ubiquitin-protein ligase UHRF2; DNA-binding, metal-binding, nucleus, phosphorylation transcription, transcription regulation; 2.30A {Homo sapiens} Length = 231 Back     alignment and structure
>3q0b_X Histone-lysine N-methyltransferase, H3 lysine-9 S SUVH5; SRA, fully methylated CG, SUVH5, 5MC binding protein, fully methylated CG duplex DNA; HET: DNA 5CM; 2.20A {Arabidopsis thaliana} PDB: 3q0c_X* 3q0d_X* 3q0f_X* Length = 167 Back     alignment and structure
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 Back     alignment and structure
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query665
3hna_A287 Histone-lysine N-methyltransferase, H3 lysine-9 sp 100.0
3q0b_X167 Histone-lysine N-methyltransferase, H3 lysine-9 S 100.0
2pb7_A239 E3 ubiquitin-protein ligase UHRF1; beta barrel, NE 100.0
3fde_A212 E3 ubiquitin-protein ligase UHRF1; SRA domain, bas 100.0
1mvh_A299 Cryptic LOCI regulator 4; lysine methyltransferase 100.0
3oln_A231 E3 ubiquitin-protein ligase UHRF2; DNA-binding, me 100.0
1ml9_A302 Histone H3 methyltransferase DIM-5; adoMet-depende 100.0
2r3a_A300 Histone-lysine N-methyltransferase SUV39H2; histon 100.0
3bo5_A290 Histone-lysine N-methyltransferase setmar; SET dom 100.0
3h6l_A278 Histone-lysine N-methyltransferase SETD2; SET doma 100.0
3ope_A222 Probable histone-lysine N-methyltransferase ASH1L; 100.0
3ooi_A232 Histone-lysine N-methyltransferase, H3 lysine-36 l 100.0
2w5y_A192 Histone-lysine N-methyltransferase HRX; transcript 99.98
3f9x_A166 Histone-lysine N-methyltransferase SETD8; methyltr 99.97
2f69_A261 Histone-lysine N-methyltransferase, H3 lysine-4 sp 99.95
1h3i_A293 Histone H3 lysine 4 specific methyltransferase; 2. 99.93
2qpw_A149 PR domain zinc finger protein 2; methyltransferase 99.92
1n3j_A119 A612L, histone H3 lysine methyltransferase; beta b 99.92
3s8p_A273 Histone-lysine N-methyltransferase SUV420H1; SET d 99.88
3rq4_A247 Histone-lysine N-methyltransferase SUV420H2; suppr 99.85
3ep0_A170 PR domain zinc finger protein 12; PR domain-contai 99.73
3db5_A151 PR domain zinc finger protein 4; methyltransferase 99.71
3dal_A196 PR domain zinc finger protein 1; methyltransferase 99.65
3ray_A237 PR domain-containing protein 11; structural genomi 99.48
3ihx_A152 PR domain zinc finger protein 10; PRDM10, methyltr 99.42
3n71_A 490 Histone lysine methyltransferase SMYD1; heart deve 98.45
3qwp_A 429 SET and MYND domain-containing protein 3; SMYD3,SE 98.44
3qww_A 433 SET and MYND domain-containing protein 2; methyltr 98.32
3qxy_A 449 N-lysine methyltransferase SETD6; epigenetics, pro 96.29
2h21_A 440 Ribulose-1,5 bisphosphate carboxylase/oxygenase; S 94.88
3smt_A 497 Histone-lysine N-methyltransferase SETD3; histone 94.71
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Back     alignment and structure
Probab=100.00  E-value=5.6e-59  Score=486.44  Aligned_cols=243  Identities=31%  Similarity=0.585  Sum_probs=212.3

Q ss_pred             CCCceeeeccccccccceeeeeCCCCCCCCCCcEEcccccCCCccccC--CCCCCCCCCCCCCCC-CCccccccCCCcee
Q 006009          396 PKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQ--GSNGAGCDCVSGCTD-RCFCAVKNGGEFAY  472 (665)
Q Consensus       396 ~~g~i~~DiS~G~E~~PV~vvN~vD~e~~P~~F~YI~~~~~~~~~~~~--~~~~~gC~C~~~C~~-~C~C~~~ngg~~~Y  472 (665)
                      +.++|+.|||+|+|++||+++|+||++.+|..|+||+++++..++...  ..+..||+|.++|.+ +|.|.+++ +.++|
T Consensus        27 ~~~~~~~Dis~G~E~~pi~~~N~vD~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~C~~~~C~C~~~~-~~~~y  105 (287)
T 3hna_A           27 VERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQNCVTSPMNIDRNITHLQYCVCIDDCSSSNCMCGQLS-MRCWY  105 (287)
T ss_dssp             CCEEEESCTTTTCSSSCCCEEESSSSCCCCCSSEECSSCEESSCCCCCCBGGGCCCCCCSSSSCSTTCHHHHHT-SSCCB
T ss_pred             cCCEEhHhhCCCCCCCCEEEEeCCCCCCCCCCcEEccccccCCCccccccCCCCCCCcCcCCCCCCCCcCcccC-ccccc
Confidence            357999999999999999999999999889999999998877665322  235689999999986 79999887 46899


Q ss_pred             cCCCceec-----CCCeEeecCCCCCCCCCCcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHH
Q 006009          473 DHNGYLLR-----GKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQ  547 (665)
Q Consensus       473 ~~~G~L~~-----~~~~i~EC~~~C~C~~~C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~e  547 (665)
                      +++|+|+.     ..+++|||++.|+|+.+|.||++|+|++.+|+||+|+.+||||||+++|++|+||+||+|||++.+|
T Consensus       106 ~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e  185 (287)
T 3hna_A          106 DKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSE  185 (287)
T ss_dssp             CTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHH
T ss_pred             CCCCcccccccccCCceEEecCCCCCCCCCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHH
Confidence            99999975     4578999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCeecccCccccccCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCCC
Q 006009          548 AQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNN  627 (665)
Q Consensus       548 a~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d  627 (665)
                      ++.+.  .+.|+|..+..                        ....++|||+.+||+||||||||+||+.++.|+..+.+
T Consensus       186 ~~~r~--~~~Y~f~l~~~------------------------~~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d  239 (287)
T 3hna_A          186 ADVRE--EDSYLFDLDNK------------------------DGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQD  239 (287)
T ss_dssp             HHTCS--CCTTEEESCCS------------------------SSSCEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCC
T ss_pred             Hhhhc--ccceEEEeccC------------------------CCceEEEeccccCCchheeeecCCCCceeEEEEEecCC
Confidence            88653  34666633210                        01358999999999999999999999999999999988


Q ss_pred             CcccEEEEEEccCCCCCCeEEEecCCCc---cCCCccccCC
Q 006009          628 LMFPHLMLFALENIPPLRELSIDYGVAD---EWSGKLAICN  665 (665)
Q Consensus       628 ~~~prI~fFA~rdI~pGEELT~DYG~~~---~~~~k~C~CG  665 (665)
                      ...++|+|||+|||++||||||||+...   ......|+||
T Consensus       240 ~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CG  280 (287)
T 3hna_A          240 LRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCG  280 (287)
T ss_dssp             TTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCC
T ss_pred             CCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCC
Confidence            8999999999999999999999999762   2356799998
>3q0b_X Histone-lysine N-methyltransferase, H3 lysine-9 S SUVH5; SRA, fully methylated CG, SUVH5, 5MC binding protein, fully methylated CG duplex DNA; HET: DNA 5CM; 2.20A {Arabidopsis thaliana} PDB: 3q0c_X* 3q0d_X* 3q0f_X* Back     alignment and structure
>2pb7_A E3 ubiquitin-protein ligase UHRF1; beta barrel, NEW fold; 1.90A {Homo sapiens} SCOP: b.122.1.12 Back     alignment and structure
>3fde_A E3 ubiquitin-protein ligase UHRF1; SRA domain, base flipping, DNA CPG methylation, cell cycle, developmental protein, DNA damage; HET: 5CM; 1.41A {Mus musculus} SCOP: b.122.1.12 PDB: 2zo0_B* 2zo2_B* 3f8i_A* 2zo1_B* 3f8j_B* 2zkd_A* 2zke_A* 2zkf_A* 2zkg_A 3dwh_A 3bi7_A 3clz_A* Back     alignment and structure
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Back     alignment and structure
>3oln_A E3 ubiquitin-protein ligase UHRF2; DNA-binding, metal-binding, nucleus, phosphorylation transcription, transcription regulation; 2.30A {Homo sapiens} SCOP: b.122.1.12 Back     alignment and structure
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Back     alignment and structure
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Back     alignment and structure
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Back     alignment and structure
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Back     alignment and structure
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Back     alignment and structure
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Back     alignment and structure
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* Back     alignment and structure
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Back     alignment and structure
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A Back     alignment and structure
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Back     alignment and structure
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Back     alignment and structure
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Back     alignment and structure
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Back     alignment and structure
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Back     alignment and structure
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Back     alignment and structure
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Back     alignment and structure
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Back     alignment and structure
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Back     alignment and structure
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} Back     alignment and structure
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Back     alignment and structure
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Back     alignment and structure
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* Back     alignment and structure
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* Back     alignment and structure
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 665
d2zkda1209 b.122.1.12 (A:405-613) E3 ubiquitin-protein ligase 6e-62
d1ml9a_284 b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T 2e-50
d1mvha_269 b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S 2e-46
d2f69a2171 b.85.7.1 (A:194-364) Histone H3 K4-specific methyl 1e-15
d2g46a1119 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth 3e-08
>d2zkda1 b.122.1.12 (A:405-613) E3 ubiquitin-protein ligase UHRF1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209 Back     information, alignment and structure

class: All beta proteins
fold: PUA domain-like
superfamily: PUA domain-like
family: SRA domain-like
domain: E3 ubiquitin-protein ligase UHRF1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  203 bits (517), Expect = 6e-62
 Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 34/211 (16%)

Query: 208 KERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIA 267
           +  +  +       G IPGV +G ++ FR+++   G+H    AGI              A
Sbjct: 7   RTTECTIVPANHF-GPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHG-------RSNDGA 58

Query: 268 TSIIVSGGYEDDEDAGDVLIYTGHGGQDKL-----SRQCEHQKLEGGNLAMERS------ 316
            S++++GGYEDD D G+   YTG GG+D       + Q   QKL   N A+  +      
Sbjct: 59  YSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPIN 118

Query: 317 --------MHYGIEVRVIRGFR---YQGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKY 365
                      G  VRV+R  +   +     ++   YDG+YK+   W + GKSGF V++Y
Sbjct: 119 EKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFLVWRY 178

Query: 366 KLLRIEGQPEMGSAILRFADSLRTKPLSVRP 396
            L R + +PE  +         RT+ L +  
Sbjct: 179 LLRRDDTEPEPWTRE----GKDRTRQLGLTM 205
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 Back     information, alignment and structure
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query665
d2zkda1209 E3 ubiquitin-protein ligase UHRF1 {Mouse (Mus musc 100.0
d1mvha_269 SET domain of Clr4 {Fission yeast (Schizosaccharom 100.0
d1ml9a_284 Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} 100.0
d2f69a2171 Histone H3 K4-specific methyltransferase SET7/9 ca 99.92
d2g46a1119 Viral histone H3 Lysine 27 Methyltransferase {Para 99.85
d2h2ja2261 RuBisCo LSMT catalytic domain {Garden pea (Pisum s 97.89
>d2zkda1 b.122.1.12 (A:405-613) E3 ubiquitin-protein ligase UHRF1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All beta proteins
fold: PUA domain-like
superfamily: PUA domain-like
family: SRA domain-like
domain: E3 ubiquitin-protein ligase UHRF1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.7e-56  Score=437.88  Aligned_cols=161  Identities=35%  Similarity=0.580  Sum_probs=146.2

Q ss_pred             cccccCCCCeeccCCCcccCceechHhhhhhhccCcCCCCCccccCCCCCCCCCCcEEEEEEcCCcCCCCCCCCeEEEEe
Q 006009          211 QLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTG  290 (665)
Q Consensus       211 ~~~~~~~~~i~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GI~~~~~~~~~~g~~~A~SIV~SggY~dd~D~gd~liYtG  290 (665)
                      ...++..++ ||+||||+|||||+||+||+++|||+++|+||++++       ..+|+|||+||||+||+|+||+|||||
T Consensus        10 ~~~~~p~~~-~G~vpGv~VGd~F~~R~el~~~GlH~~~~aGI~g~~-------~~GA~SIV~SGgYeDD~D~gd~liYTG   81 (209)
T d2zkda1          10 ECTIVPANH-FGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRS-------NDGAYSLVLAGGYEDDVDNGNYFTYTG   81 (209)
T ss_dssp             CCCSSCTTC-CSCCTTCCTTCEESSHHHHHHTTSSCCSSCSEEEET-------TTEEEEEEECSCSTTCEECSSEEEEEC
T ss_pred             eEEeCCCCc-ccCCCCCCCCCEECCHHHHHHcCCCCCccCcEeecC-------CCceEEEEECCCccccccCCcEEEEEC
Confidence            345667777 699999999999999999999999999999999753       456999999999999999999999999


Q ss_pred             cCCCCCC-----CccccCcccchhhHHHHHh--------------hhcCceeEEEeccccC---CCCcceeeEecCeEEE
Q 006009          291 HGGQDKL-----SRQCEHQKLEGGNLAMERS--------------MHYGIEVRVIRGFRYQ---GSVSSKVYVYDGLYKI  348 (665)
Q Consensus       291 ~GG~~~~-----~~~~~dQ~l~~gNlAL~~S--------------~~~~~pVRViRg~k~~---~~~~~~~yrYDGLY~V  348 (665)
                      +||++..     ..|..||+|++||+||++|              |++++|||||||++..   ...|.++|||||||+|
T Consensus        82 ~GG~d~~~~k~~~~q~~DQkl~~gNlAL~~Sc~~~~n~~~~~~~~~~~g~PVRVIRg~k~~~~~~~~p~~gYrYDGLY~V  161 (209)
T d2zkda1          82 SGGRDLSGNKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKV  161 (209)
T ss_dssp             SCCBCCTTTCSCCCBCSCCCSSHHHHHHHHTSSSCCCTTCEECTTGGGSCCEEEEEEGGGGGTCTTSCSSSEEEEEEEEE
T ss_pred             CCCccccCCccccccccceeeccchHHHhhccccccccccchhhhhhcCCceEEEEeeccccCCCcCCCceEEeCcEEEE
Confidence            9999865     3489999999999999999              7799999999999852   2348999999999999


Q ss_pred             EEeEeecCCCcceEEEEEEEeecCCCCCcch
Q 006009          349 HDCWFDVGKSGFGVYKYKLLRIEGQPEMGSA  379 (665)
Q Consensus       349 ~~~w~e~g~~G~~v~kf~L~R~~gQ~~l~s~  379 (665)
                      ++||.++|++||.||||+|+|+||||+.++.
T Consensus       162 ~~~w~e~gk~G~~V~rF~L~R~~gQp~p~~~  192 (209)
T d2zkda1         162 VKYWPERGKSGFLVWRYLLRRDDTEPEPWTR  192 (209)
T ss_dssp             EEEEEEECTTSSEEEEEEEEECCSSCCTTSH
T ss_pred             EEEEEccCCCCcEEEEEEEEECCCCCCCccc
Confidence            9999999999999999999999999997654
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Back     information, alignment and structure
>d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Back     information, alignment and structure
>d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure