Citrus Sinensis ID: 006052

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660---
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPKEEYSP
cccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccccEEEEEEEcccccHHHHHHHHccccccccccEEEEEEEEccEEEEEEEEccccEEEEEEEccccccccccHHHHHHHHHHHcccHHHHHHHHHHccccccEEEEccccccccccccccccccEEEEEEEEEEccccccccccccccEEEEEccccEEEEEEcccccccccccccccccccccccccccccccEEEcccccEEEEEccEEEEEEEEEEEEEEcEEEEccccccEEEEEEEEccEEEEEcccccHHHHHEEEEEccccccccccccccccccccccEEEEEEEEEccccccEEEccEEEEEEEEcccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEccccEEEEEEEEcccEEEEEEEEEEEEEEEEEEcccccccccccccEEccccccccccEEEEEEEEccccccccEEEEEEEEEEEcccccccccEEEEEEEEEEccHHHHHHHccccccEEEEEcccccccccccEEEEEEEccccccccccccHHHHccccccccEEEEEEcccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccccccccEEEEEEEcccccccccccccccccccccc
cccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEEccccHHHHHHHHHcHHHcccccEEEEEEEEccEEEEEEEEccccEEEEEEEcccccEccccHHHHHHHccHHHHcHHHHHHHHHccccHHHEEEEEEcccccccccccccccccEEEEEEEEccccccHHHcEcccEEEEEEccccEEEEEEEcccccccccccccccHHHcccccccccccEEEEccccccEEEEccEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEccccccccccEEcHHHHHcccccEccccEcccEccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEccEEEEEEEEEcccccEEEEEEEEEcccEEEcccccHHHccccccEEEEEccEEEEcEEEEEEEEEEEcccccEEEEEEEEEEEEEcccccccccEEEEEEEEEccEHHHHcEccccccEEEEEEEEEEEcccccEEEEEEEcccccccccccccHHHHHcHHHHccEEEEEcccccccccccccEcccccccHHHHHHHccEcccEEEEEEEEEEEEEcccHHHccccccEEEEcEEEEccccccccccccccccEcccc
MAAAPSQTILFIILLHIFYIfvpshqyhpldsltpsefSQIRSIVTkaypessthkltfqyvgleepskQTVISWLknetttnpprqAFVIARIDHQTHELIVDLSLQEIASKRiysgygypmftfedqenadklaftyppfVASIRRRGLKLEEVVCESfsvgwygaeeeegknkKRIVKVMCYYMNgtvnlfmrpiegismtvdldemkiigfqdrvtvpvpkadetefreskikppfrqsLKAITvvqpdgpsftidghmISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFfdageygyglcsmtleplrdcppnavfmdayfskqdgmprkipKAFCIFERYAGDImwrhteatipgktvreVRQDVSLVVRTVStfgnydyvndwefkqsgsIKVTVGLTGMvqvrgttythkdhmeedvygTLVAENSIAIHHDHFLTYrldldvdgdansFVRSKLrttrvndrrssrksywtvdsktaktesdariklgsepaellfvnpnkktkmgnligyrlipegvtgallssddhpqirAAFTNYNVWVTAYNksekwagglyadqshgddtLAVWSNRNRSIENKDIVLWYTLgfhhvpyqedfpvmptlnggfelrpsnffesnpvlkvkqpkeeysp
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTkaypesstHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESfsvgwygaeeeegknkkriVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIgfqdrvtvpvpkadetefreskikppfrqslKAITVVQPDGPSFTIDGHMISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYfskqdgmprKIPKAFCIFERYAGDIMWRHTeatipgktvrevrqdVSLVVRTvstfgnydyvndwefKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDAnsfvrsklrttrvndrrssrksywtvdsktaktesdariklgsepaellfvnpnkktkmgNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELrpsnffesnpvlkvkqpkeeysp
MAAAPSQTilfiillhifyifVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPKEEYSP
*******TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWY***********RIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPV********************LKAITVVQPDGPSFTIDGHMISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVR******************************************LLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNF******************
*****SQ*ILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEF*****************VVQPDGPSFTIDGHMISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPV************
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKL***************************DARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKV*********
****PSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPK*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPKEEYSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query663 2.2.26 [Sep-21-2011]
Q43077674 Primary amine oxidase OS= N/A no 0.972 0.956 0.520 0.0
P49252667 Primary amine oxidase (Fr N/A no 0.972 0.967 0.517 0.0
Q8H1H9712 Primary amine oxidase OS= no no 0.935 0.870 0.469 1e-169
P46883757 Primary amine oxidase OS= N/A no 0.914 0.800 0.315 1e-82
P80695752 Primary amine oxidase OS= yes no 0.920 0.811 0.32 8e-81
P49250755 Primary amine oxidase OS= yes no 0.921 0.809 0.318 5e-79
Q59118684 Histamine oxidase OS=Arth N/A no 0.911 0.883 0.287 1e-66
Q07123648 Copper methylamine oxidas N/A no 0.903 0.924 0.285 2e-66
Q07121648 Primary amine oxidase OS= N/A no 0.903 0.924 0.285 2e-66
P46881638 Phenylethylamine oxidase N/A no 0.742 0.771 0.275 1e-52
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1 Back     alignment and function desciption
 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/661 (52%), Positives = 472/661 (71%), Gaps = 16/661 (2%)

Query: 8   TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEP 67
           ++L ++  H      P H  HPLD LT  EF  +++IV   YP S+ ++L F Y+GL++P
Sbjct: 13  SVLTLLSFHAVVSVTPLHVQHPLDPLTKEEFLAVQTIVQNKYPISN-NRLAFHYIGLDDP 71

Query: 68  SKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFE 127
            K  V+ +  + T  + PR+ FV+A I+ QTHE++++L ++ I S  I++GYG+P+ + +
Sbjct: 72  EKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVD 131

Query: 128 DQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYM 187
           +Q  A KL   YPPF+ S+++RGL L E+VC SF++GW+G E+       R V++ C+  
Sbjct: 132 EQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEEK-----NVRTVRLDCFMK 186

Query: 188 NGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAI 247
             TVN+++RPI GI++  DLD MKI+ + DR    VP A+ TE++ SK  PPF     ++
Sbjct: 187 ESTVNIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSL 246

Query: 248 TVVQPDGPSFTIDGHMIS---------FDVRAGMIISLASIYDLEKQQSRRVLYKGHVSE 298
           T  QP GP F I+GH +S         FDVRAG++ISLASIYDLEK +SRRVLYKG++SE
Sbjct: 247 TSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISE 306

Query: 299 MFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIP 358
           +FVPY D TEE+  +TFFD+GE+G+GL +++L P RDCPP+A F+D Y    +G P  + 
Sbjct: 307 LFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLK 366

Query: 359 KAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGS 418
            A C+FE+Y G+IMWRHTE  IP +++ E R +V+L+VRT+ T GNYD V DWEFK SGS
Sbjct: 367 NAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGS 425

Query: 419 IKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANS 478
           IK ++ L+G+++++GT   HKD ++ED++G LV+ NSI I+HDHF  Y LD D+DG  NS
Sbjct: 426 IKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNS 485

Query: 479 FVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNL 538
           F ++ L+T R+ D  S RKSYWT +++TAKTESDA+I +G  PAEL+ VNPN KT +GN 
Sbjct: 486 FEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNE 545

Query: 539 IGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAV 598
           +GYRLIP      LL+ DD+PQIR AFTNYNVWVTAYN++EKWAGGLY D S GDDTLAV
Sbjct: 546 VGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAV 605

Query: 599 WSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPK 658
           W+ +NR I NKDIV+W+ +G HHVP QEDFP+MP L+  FELRP+NFFE NPVLK   P+
Sbjct: 606 WTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPR 665

Query: 659 E 659
           +
Sbjct: 666 D 666

Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3 Back     alignment and function description
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1 Back     alignment and function description
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query663
224108047673 predicted protein [Populus trichocarpa] 0.950 0.936 0.697 0.0
224102055668 predicted protein [Populus trichocarpa] 0.980 0.973 0.658 0.0
255551473689 Amine oxidase [copper-containing] precur 0.983 0.946 0.671 0.0
225432644676 PREDICTED: primary amine oxidase [Vitis 0.944 0.926 0.669 0.0
225432636674 PREDICTED: primary amine oxidase [Vitis 0.953 0.937 0.647 0.0
147832635 1265 hypothetical protein VITISV_040530 [Viti 0.944 0.494 0.654 0.0
449492626678 PREDICTED: LOW QUALITY PROTEIN: primary 0.972 0.951 0.610 0.0
449444246681 PREDICTED: primary amine oxidase-like [C 0.972 0.947 0.603 0.0
225432632667 PREDICTED: primary amine oxidase [Vitis 0.944 0.938 0.631 0.0
147794975644 hypothetical protein VITISV_029120 [Viti 0.907 0.934 0.614 0.0
>gi|224108047|ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/645 (69%), Positives = 529/645 (82%), Gaps = 15/645 (2%)

Query: 23  PSHQ-YHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETT 81
           P+HQ  HPLDSLTP+EFS+IR+IV  +YP  S H   F YVGLE+P+K TV+SWLK+ TT
Sbjct: 21  PTHQRQHPLDSLTPAEFSKIRAIVHSSYPIPS-HTTAFHYVGLEDPNKLTVLSWLKDPTT 79

Query: 82  TNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPP 141
             PPRQAFVIARI+  THE+ VDL++ +I S ++Y GYGYP+ TFE+Q  A+ L   Y P
Sbjct: 80  KTPPRQAFVIARINQTTHEITVDLTINKIVSDKLYDGYGYPLLTFEEQIAANALPLKYAP 139

Query: 142 FVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGI 201
           F+ SIR+RGLK+EEVVC  F+VGWYG E    + KKRIV+VMCYY++GTVN +MRP+EG+
Sbjct: 140 FLESIRKRGLKIEEVVCGGFTVGWYGEE----RRKKRIVRVMCYYLDGTVNAYMRPVEGV 195

Query: 202 SMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDG 261
           ++TVDL+E KIIGF+DR+TVP+PK D T++R SK  PPF   LK IT+VQPDGPSFTIDG
Sbjct: 196 TVTVDLEETKIIGFKDRLTVPIPKGDGTDYRGSKQNPPFLAQLKGITMVQPDGPSFTIDG 255

Query: 262 HMI---------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQR 312
           H I         SFD RAG IISLASI+DL+KQ+ R+VLYKG VSE+FVPYMDLTEEW  
Sbjct: 256 HRIRWANWDFHLSFDSRAGPIISLASIFDLQKQKFRQVLYKGFVSELFVPYMDLTEEWYY 315

Query: 313 RTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIM 372
           RTFFDAGEYGYGLC++ LEP RDCP NAVFMDAYF+ Q+GMP  +P  FCIFE+YAGDI 
Sbjct: 316 RTFFDAGEYGYGLCAVPLEPFRDCPENAVFMDAYFAGQNGMPVNMPDVFCIFEKYAGDIT 375

Query: 373 WRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVR 432
           WRHTE   PG+ +REVR +V+LVVR VST GNYDY+NDWEFKQSGSIKVTVGLTG+++VR
Sbjct: 376 WRHTETLKPGEEIREVRPEVTLVVRMVSTVGNYDYINDWEFKQSGSIKVTVGLTGLLEVR 435

Query: 433 GTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDR 492
           G+ YTH D ++E+VYGTL+AEN++  HHDHFLTY LDLDVDGDANS V+S L+ TRV D+
Sbjct: 436 GSVYTHNDQIKEEVYGTLLAENTVGAHHDHFLTYHLDLDVDGDANSLVKSNLQMTRVADQ 495

Query: 493 RSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGAL 552
            S RKSYW V S+TAKTESDARI+LG E A+LL VNPNK+T +GN IGYRLIP  +T  +
Sbjct: 496 MSPRKSYWRVVSETAKTESDARIRLGVEQADLLVVNPNKRTDLGNSIGYRLIPGSLTHPV 555

Query: 553 LSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIV 612
           LS DD+ QIR AFT YNVWVT YNKSEKWAGGLYADQS GDDTLA WS RNR IENKDIV
Sbjct: 556 LSDDDYSQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGDDTLARWSLRNRGIENKDIV 615

Query: 613 LWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQP 657
           LWYTLGFHHVPYQEDFPVMPT++ GFELRP+NFFESNPVLKVK P
Sbjct: 616 LWYTLGFHHVPYQEDFPVMPTISSGFELRPANFFESNPVLKVKLP 660

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224102055|ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255551473|ref|XP_002516782.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] gi|223543870|gb|EEF45396.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225432644|ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737038|emb|CBI26239.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432636|ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737034|emb|CBI26235.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147832635|emb|CAN68223.1| hypothetical protein VITISV_040530 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449492626|ref|XP_004159052.1| PREDICTED: LOW QUALITY PROTEIN: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449444246|ref|XP_004139886.1| PREDICTED: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225432632|ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737032|emb|CBI26233.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147794975|emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query663
TAIR|locus:2028606681 AT1G31710 [Arabidopsis thalian 0.947 0.922 0.551 3.5e-201
TAIR|locus:2028636677 AT1G31690 [Arabidopsis thalian 0.939 0.920 0.566 4.5e-201
UNIPROTKB|Q43077674 Q43077 "Primary amine oxidase" 0.950 0.934 0.532 5.1e-193
TAIR|locus:2028666741 AT1G31670 [Arabidopsis thalian 0.924 0.827 0.548 3e-188
TAIR|locus:2129520650 AO1 "amine oxidase 1" [Arabido 0.933 0.952 0.514 5.5e-180
TAIR|locus:2026267712 CuAO1 "COPPER AMINE OXIDASE1" 0.935 0.870 0.471 2.7e-155
TAIR|locus:2139069741 AT4G12290 [Arabidopsis thalian 0.942 0.843 0.461 4e-154
TAIR|locus:2080173687 AT3G43670 [Arabidopsis thalian 0.938 0.905 0.457 5.1e-154
UNIPROTKB|P46883757 tynA "TynA" [Escherichia coli 0.921 0.807 0.322 3.2e-81
TAIR|locus:2139054300 AT4G12280 [Arabidopsis thalian 0.416 0.92 0.533 4.1e-81
TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1947 (690.4 bits), Expect = 3.5e-201, P = 3.5e-201
 Identities = 356/645 (55%), Positives = 477/645 (73%)

Query:    28 HPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLK--NETTTNPP 85
             HP D LT +E   +R+I+ K+YP    HK TFQYVGL EP+K  V+SW    N T   PP
Sbjct:    28 HPFDPLTETELKLVRTIINKSYPVGPNHKFTFQYVGLNEPNKSLVLSWYSSPNHTIKPPP 87

Query:    86 RQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVAS 145
             RQAFVIAR + +T E+++D S + I S +I+ G GYPM + ++QE + +L   + PF+ S
Sbjct:    88 RQAFVIARDNGKTREIVLDFSSRAIVSDKIHVGNGYPMLSNDEQEASTELVVKFKPFIDS 147

Query:   146 IRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTV 205
             + +RGL + E+V  + ++GWYG  + E +   R++++M +Y++GTVN+++RPIEG+++ V
Sbjct:   148 VAKRGLNVSEIVFTTSTIGWYGETKAEAE---RVIRLMPFYLDGTVNMYLRPIEGMTIIV 204

Query:   206 DLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHM-- 263
             +LDEMK+  F+DR  V +P A+ TE+R SK+ PPF  +L    ++QPDGP F +DGH+  
Sbjct:   205 NLDEMKVSEFKDRSVVTMPIANGTEYRISKLNPPFGPTLHNAVLLQPDGPGFKVDGHIVR 264

Query:   264 -------ISFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFF 316
                    ISFDVRAG++ISLAS++D +  + R+VLYKGH+SEMF+PYMD +++W   T+ 
Sbjct:   265 WANWEFHISFDVRAGIVISLASLFDTDVNKYRQVLYKGHLSEMFIPYMDPSDDWYFITYL 324

Query:   317 DAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHT 376
             D G++G G C+++L+P  DCP  AVFMD  F+ QDG P KIPK  CIFE+YAGDIMWRHT
Sbjct:   325 DCGDFGCGQCAVSLQPYTDCPAGAVFMDGIFAGQDGTPAKIPKVMCIFEKYAGDIMWRHT 384

Query:   377 EATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTY 436
             EA IP   + EVR DVSLV R V+T GNYDY+ D+EFK SGSIK+ VGLTG+++V+   Y
Sbjct:   385 EAEIPNLEITEVRPDVSLVARIVTTVGNYDYIVDYEFKPSGSIKMGVGLTGVLEVKPVEY 444

Query:   437 THKDHME--EDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRV-NDRR 493
              H   ++  ED++GT+VA+N++ ++HDHF+T+RL LD+DG  NSFVR++L TTR      
Sbjct:   445 IHTSEIKLGEDIHGTIVADNTVGVNHDHFVTFRLHLDIDGTENSFVRNELVTTRSPKSVN 504

Query:   494 SSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALL 553
             + RK+YWT   KTAKTE++AR+KLG +  EL+ VNPN+KTK GN +GYRL+     G LL
Sbjct:   505 TPRKTYWTTKPKTAKTEAEARVKLGLKAEELVVVNPNRKTKHGNEVGYRLLHGSAAGPLL 564

Query:   554 SSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVL 613
             + DD PQIRAAFTNYNVW+T YN+SE WAGGLYAD+S GDDTLAVWS RNR IE +DIV+
Sbjct:   565 AQDDFPQIRAAFTNYNVWITPYNRSEVWAGGLYADRSQGDDTLAVWSQRNRKIEKEDIVM 624

Query:   614 WYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPK 658
             WYT+GFHHVP QED+P MPTL+GGFELRP+NFFE NPVLK K  K
Sbjct:   625 WYTVGFHHVPSQEDYPTMPTLSGGFELRPTNFFERNPVLKTKPVK 669
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P46883 tynA "TynA" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2139054 AT4G12280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49252AMO_LENCU1, ., 4, ., 3, ., 2, 10.51730.97280.9670N/Ano
P80695AMO_KLEOK1, ., 4, ., 3, ., 2, 10.320.92000.8111yesno
P49250AMO_ENTAE1, ., 4, ., 3, ., 2, 10.31890.92150.8092yesno
Q43077AMO_PEA1, ., 4, ., 3, ., 2, 10.52040.97280.9569N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.946
3rd Layer1.4.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query663
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 1e-171
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 1e-161
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 1e-144
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 1e-109
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 6e-24
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 2e-20
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information 
 Score =  826 bits (2136), Expect = 0.0
 Identities = 365/659 (55%), Positives = 466/659 (70%), Gaps = 27/659 (4%)

Query: 8   TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEP 67
            I  + L+ I      +  YHPLD L P E ++IR IV K++   +   LTF ++ LEEP
Sbjct: 2   NIPILALVFILQCCFVASLYHPLDPLNPQEINKIRLIVQKSH-LGNLPNLTFHFLDLEEP 60

Query: 68  SKQTVISWLK--NETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFT 125
            K+ V+ WL       + PPR+A V+ R   +T+ELIVDL+   I S R+Y+G+GYP  T
Sbjct: 61  EKRDVLKWLSSNPSNKSPPPRRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLT 120

Query: 126 FEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCY 185
           F +   A KL   YP F  SI RRGL + EV C  F+VGWYG         KR +K+ C+
Sbjct: 121 FIELFQASKLPLKYPKFKKSILRRGLNISEVSCIPFTVGWYGET-----VTKRALKISCF 175

Query: 186 YMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLK 245
           Y  G+VN+F RPIEGIS+ +D+D M+II + DR   P+PKA+ T+FR       F     
Sbjct: 176 YRGGSVNVFARPIEGISILIDVDSMQIIKYSDRFRAPLPKAEGTDFRTKHKPFSF----- 230

Query: 246 AITVVQPDGPSFTIDGHMI---------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHV 296
               V   G  FTI GH +          FD RAG+ IS AS++D + ++ RRVLY+GHV
Sbjct: 231 -PCNVSDSG--FTILGHRVKWANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHV 287

Query: 297 SEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRK 356
           SE FVPYMD T EW  RTF D GE+G+G  ++TL+PL DCP NAV++D Y +  DG  +K
Sbjct: 288 SETFVPYMDPTSEWYFRTFMDIGEFGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQK 347

Query: 357 IPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQS 416
           +    CIFERY+GD+ +RHTE  +PG+ +R    ++SLVVR V+T GNYDY+ DWEFK+S
Sbjct: 348 MTNVICIFERYSGDVAFRHTEINVPGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKS 407

Query: 417 GSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDA 476
           GSIKV V LTG+++++ T+YT+ D + +DVYGTLVAEN+IA++HDHFLTY LDLDVDG+ 
Sbjct: 408 GSIKVGVDLTGVLEMKATSYTNNDQITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNG 467

Query: 477 NSFVRSKLRTTRVN--DRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTK 534
           NSFV++KL+T RV   +  S RKSYWTV  +TAKTE++ RI+LGSEPAELL VNPNKKTK
Sbjct: 468 NSFVKAKLQTARVTAVNASSPRKSYWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTK 527

Query: 535 MGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDD 594
           +GN +GYRLI      +LLS DD+PQIRAA+T Y VWVTAYNKSE+WAGG YAD+S GDD
Sbjct: 528 LGNQVGYRLITGQPVTSLLSDDDYPQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDD 587

Query: 595 TLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLK 653
            LAVWS+RNR IENKDIVLWYT+GFHH+PYQEDFPVMPTL+GGFELRP+NFFESNP+L+
Sbjct: 588 GLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPVMPTLHGGFELRPANFFESNPLLR 646

Length = 646
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 663
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.87
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.77
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.6e-183  Score=1534.95  Aligned_cols=615  Identities=34%  Similarity=0.581  Sum_probs=577.8

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEe--CCeeEEE
Q 006052           24 SHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARI--DHQTHEL  101 (663)
Q Consensus        24 ~~~~HPldpLt~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vL~~l~~~~~~~p~R~A~vv~~~--~~~~~E~  101 (663)
                      ....|||||||++||++|++|||++.+.  .+.++|.+|+|.||+|++|++|+.++   +++|+|+|++++  ++.++|+
T Consensus        10 ~~~~HPLdpLt~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~EP~K~~v~~~~~g~---~~~R~a~v~~~~~~~~~~~e~   84 (647)
T PRK11504         10 AAVSHPLDPLTAAEIEAAVAILRAEGLL--GESTRFVSIELAEPPKAEVLAFDPGD---PIDRRAFVVLYDRATGKTYEA   84 (647)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcccc--CCceEEEEeeccCCCHHHHHhhhcCC---CCCcEEEEEEEECCCCcEEEE
Confidence            3456999999999999999999998763  25789999999999999999999975   247999999996  5679999


Q ss_pred             EEeCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhccChhHHHHHHHhCC-CCCCeEEccccccccCCccccCCCCceEE
Q 006052          102 IVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL-KLEEVVCESFSVGWYGAEEEEGKNKKRIV  180 (663)
Q Consensus       102 ~V~l~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~v~~d~~~~g~~~~~~~~~~~~~R~~  180 (663)
                      +|||+.++|++++.++ ++||+++.||+.+||++|++||+|++||+|||| ++++|+||||++|||+.+++.   ++|++
T Consensus        85 vVdL~~~~V~~~~~~~-~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~~~V~~dpw~~G~~~~~~~~---~~Rl~  160 (647)
T PRK11504         85 VVSLTAGEVVSWEEIP-GVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEER---GRRLA  160 (647)
T ss_pred             EEECCCCEEEEEEECC-CccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCcceEEEcCccccccCCCCcC---CceEE
Confidence            9999999999999987 469999999999999999999999999999999 578999999999999865433   68999


Q ss_pred             EEEEEEe-cCCCCCccCCcCCcEEEEecCccEEEEEECCceeecCCCCCCcCccccCCCCCCCCCCCceeeCCCCCeEEE
Q 006052          181 KVMCYYM-NGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTI  259 (663)
Q Consensus       181 ~~~~f~~-~~~~n~ya~Pl~gl~~~vD~~~~~vv~i~~~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v  259 (663)
                      |++||+| ++++|+|||||+||+++||+++|||++|+|.+..|+|+.+ .+|.++.++ ++|+++||+.|+||||+||+|
T Consensus       161 ~~~~~~r~~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~-~~Y~~~~~~-~~r~dlkPl~i~QPeG~sF~v  238 (647)
T PRK11504        161 RGLAFVRADPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED-GNYDPEFIP-PLRTDLKPLEITQPEGPSFTV  238 (647)
T ss_pred             EEEEEEecCCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC-CCCChhHcc-ccccCCCCcceeCCCCCcEEE
Confidence            9999999 5799999999999999999999999999998877777775 599988764 679999999999999999999


Q ss_pred             eCeEE---------eeeccCceeEeecEEeecCCCceeeEEEeeeeeeEEeecCCCChhhhhcceeccCCCCCCccccCC
Q 006052          260 DGHMI---------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTL  330 (663)
Q Consensus       260 ~g~~v---------~f~~reGlvl~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~a~~L  330 (663)
                      +|++|         |||+|||||||||+|.|  .|++|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|
T Consensus       239 ~g~~V~W~~W~f~vgf~~reGlvL~dv~y~d--~g~~R~v~YrlslsEm~VPYgdp~p~~~~k~~fD~GeyG~G~~an~L  316 (647)
T PRK11504        239 DGNEVEWQKWSFRVGFNPREGLVLHQVSYDD--GGRERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSL  316 (647)
T ss_pred             cCCEEEECCcEEEEecCCCCceEEEEEEEcC--CCCcceEEEEeeeeeeeeecCCCCcchhhceeeeccccCCccccccc
Confidence            99999         99999999999999998  67889999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcEEeeeEEecCCCCeEEeccceEEEEecCCCceeeccccCCCCeeEeeeeeceEEEEEEeEeecccceeEE
Q 006052          331 EPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVND  410 (663)
Q Consensus       331 ~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~  410 (663)
                      ++||||||+|+|||+++++++|+|++++|||||||+| +|+||||++++++..+++|   +++||||+|+|||||||||+
T Consensus       317 ~lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~D-~GilwkHt~~r~~~~~v~r---~r~LVvr~I~TVgNYdYi~~  392 (647)
T PRK11504        317 ELGCDCLGEIRYFDAVLADSDGEPYTIKNAICMHEED-YGILWKHTDFRTGSAEVRR---SRRLVISFFATVGNYDYGFY  392 (647)
T ss_pred             ccCCCCCCCCEEcceEEecCCCCeEEecCEEEEeeec-CCeeeeeeccCCCcEEEEe---ccEEEEEEEEecccccEEEE
Confidence            9999999999999999999999999999999999999 7899999999987666544   45999999999999999999


Q ss_pred             EEEeeCccEEEEEeeeeeeeeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEEEEEeecC
Q 006052          411 WEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVN  490 (663)
Q Consensus       411 ~~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~  490 (663)
                      |+|||||+||++|+|||||++++..     .+++.+||++|+++++|++|||+|||||||||||.+|||+++|+++++..
T Consensus       393 w~F~qdG~Ie~eV~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~p~~  467 (647)
T PRK11504        393 WYFYQDGTIEFEVKLTGIVFTAAVP-----PGETPPYGTLVAPGLYAPNHQHFFNARLDMDVDGPGNSVYEVNSVPVPMG  467 (647)
T ss_pred             EEEecCceEEEEEEeeeEEEeeeeC-----CCccCCCcceecCCcccccceEEEEEEEcccccCCCceEEEEEeEecCCC
Confidence            9999999999999999999986542     22346899999999999999999999999999999999999999998876


Q ss_pred             CCCCCCceeEEEEEeeecChhhhhhhcCC-CCcEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhccccccce
Q 006052          491 DRRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYN  569 (663)
Q Consensus       491 ~~~np~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~ivN~~~~n~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~  569 (663)
                       ++||++++|+++++++++|++|++++++ ++|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+||
T Consensus       468 -~~np~g~~~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~~~~~l~~~~s~~~~ra~fa~~~  546 (647)
T PRK11504        468 -PDNPHGNAFYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHH  546 (647)
T ss_pred             -CCCccceEEEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCCCccccCCCCchhhhcchhhhCc
Confidence             6999999999999999999999999999 99999999999999999999999999999999999999999999999999


Q ss_pred             eEEeeeCCCccCCCCcCccCCCCCCChhhhhcCCCceecCCeEEEEEeCcccCCCCCCCCCcccceeeeEEEeCCCCCCC
Q 006052          570 VWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESN  649 (663)
Q Consensus       570 lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFFd~n  649 (663)
                      ||||+|+|+|+||||+|+||+.+++||+.|+++||+|+|+|||+|+|||+||+||+|||||||+++.||+|||+|||++|
T Consensus       547 lwVT~y~d~E~~aag~y~~Qs~~~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~ED~PvMP~~~~gf~L~P~nFF~~N  626 (647)
T PRK11504        547 LWVTPYDPDERYAAGDYPNQSAGGDGLPAYIAADRSIENTDVVLWYTFGITHVPRPEDWPVMPVDYAGFKLKPVGFFDRN  626 (647)
T ss_pred             EEEeccCCCccccCCCCcccCCCCCCHHHHhcCCCccccCceEEEEecCcccCCChhhCCCCccceEEEEEEcCCCCCCC
Confidence            99999999999999999999999899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC
Q 006052          650 PVLKVKQPKEEY  661 (663)
Q Consensus       650 P~ld~p~~~~~~  661 (663)
                      |+||+|++.+..
T Consensus       627 Paldvp~s~~~~  638 (647)
T PRK11504        627 PALDLPPEPPAA  638 (647)
T ss_pred             ccccCCCccccc
Confidence            999999998743

>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query663
1w2z_A649 Psao And Xenon Length = 649 0.0
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 0.0
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 8e-84
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 7e-83
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 2e-82
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 3e-82
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 3e-82
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 7e-82
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 4e-54
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 5e-54
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 4e-53
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 4e-53
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 4e-53
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 7e-53
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 3e-52
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 3e-52
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 5e-52
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 1e-51
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 7e-51
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 1e-50
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 4e-49
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 3e-48
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 2e-47
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 2e-47
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 2e-47
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 5e-37
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 3e-30
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 2e-28
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 2e-28
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 2e-28
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 7e-27
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 1e-20
1rky_A747 Pplo + Xe Length = 747 1e-20
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure 
Iteration: 1

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/646 (52%), Positives = 464/646 (71%), Gaps = 16/646 (2%)
Query: 23  PSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTT 82
           P H  HPLD LT  EF  +++IV   YP  S ++L F Y+GL++P K  V+ +  + T  
Sbjct: 3   PLHVQHPLDPLTKEEFLAVQTIVQNKYP-ISNNRLAFHYIGLDDPEKDHVLRYETHPTLV 61
Query: 83  NPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPF 142
           + PR+ FV+A I+ QTHE++++L ++ I S  I++GYG+P+ + ++Q  A KL   YPPF
Sbjct: 62  SIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPF 121
Query: 143 VASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGIS 202
           + S+++RGL L E+VC SF++GW+G E+       R V++ C+    TVN+++RPI GI+
Sbjct: 122 IDSVKKRGLNLSEIVCSSFTMGWFGEEK-----NVRTVRLDCFMKESTVNIYVRPITGIT 176
Query: 203 MTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGH 262
           +  DLD MKI+ + DR    VP A+ TE++ SK  PPF     ++T  QP GP F I+GH
Sbjct: 177 IVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGH 236
Query: 263 MIS---------FDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRR 313
            +S         FDVRAG++ISLASIYDLEK +SRRVLYKG++SE+FVPY D TEE+  +
Sbjct: 237 SVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFK 296
Query: 314 TFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMW 373
           TFFD+GE+G+GL +++L P RDCPP+A F+D Y    +G P  +  A C+FE+Y G+IMW
Sbjct: 297 TFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMW 355
Query: 374 RHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRG 433
           RHTE  IP +++ E R +V+L+VRT+ T GN D V DWEFK SGSIK ++ L+G+++++G
Sbjct: 356 RHTENGIPNESIEESRTEVNLIVRTIVTVGNXDNVIDWEFKASGSIKPSIALSGILEIKG 415
Query: 434 TTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRR 493
           T   HKD ++ED++G LV+ NSI I+HDHF  Y LD D+DG  NSF ++ L+T R+ D  
Sbjct: 416 TNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGS 475
Query: 494 SSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALL 553
           S RKSYWT +++TAKTESDA+I +G  PAEL+ VNPN KT +GN +GYRLIP      LL
Sbjct: 476 SKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLL 535
Query: 554 SSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVL 613
           + DD+PQIR AFTNYNVWVTAYN++EKWAGGLY D S GDDTLAVW+ +NR I NKDIV+
Sbjct: 536 TEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVM 595
Query: 614 WYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPKE 659
           W+ +G HHVP QEDFP+MP L+  FELRP+NFFE NPVLK   P++
Sbjct: 596 WHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRD 641
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query663
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 0.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-178
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 1e-175
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 1e-163
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-163
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-142
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-140
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-138
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-137
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query663
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 663
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-171
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-149
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-148
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-147
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-133
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1e-40
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 6e-32
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 1e-30
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1e-28
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 6e-25
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1e-22
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 2e-20
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 7e-18
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

 Score =  495 bits (1275), Expect = e-171
 Identities = 253/435 (58%), Positives = 325/435 (74%), Gaps = 10/435 (2%)

Query: 234 SKIKPPFRQSLKAITVVQPDGPSFTIDGHMIS---------FDVRAGMIISLASIYDLEK 284
           SK  PPF     ++T  QP GP F I+GH +S         FDVRAG++ISLASIYDLEK
Sbjct: 2   SKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEK 61

Query: 285 QQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMD 344
            +SRRVLYKG++SE+FVPY D TEE+  +TFFD+GE+G+GL +++L P RDCPP+A F+D
Sbjct: 62  HKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFID 121

Query: 345 AYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGN 404
            Y    +G P  +  A C+FE+Y   IMWRHTE  IP +++ E R +V+L+VRT+ T GN
Sbjct: 122 TYVHSANGTPILLKNAICVFEQYGN-IMWRHTENGIPNESIEESRTEVNLIVRTIVTVGN 180

Query: 405 YDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFL 464
           YD V DWEFK SGSIK ++ L+G+++++GT   HKD ++ED++G LV+ NSI I+HDHF 
Sbjct: 181 YDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFY 240

Query: 465 TYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAEL 524
            Y LD D+DG  NSF ++ L+T R+ D  S RKSYWT +++TAKTESDA+I +G  PAEL
Sbjct: 241 IYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAEL 300

Query: 525 LFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGG 584
           + VNPN KT +GN +GYRLIP      LL+ DD+PQIR AFTNYNVWVTAYN++EKWAGG
Sbjct: 301 VVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGG 360

Query: 585 LYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSN 644
           LY D S GDDTLAVW+ +NR I NKDIV+W+ +G HHVP QEDFP+MP L+  FELRP+N
Sbjct: 361 LYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTN 420

Query: 645 FFESNPVLKVKQPKE 659
           FFE NPVLK   P++
Sbjct: 421 FFERNPVLKTLSPRD 435
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query663
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.95
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.94
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.94
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.92
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.87
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.87
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.86
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.74
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 99.36
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 92.88
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=8.6e-139  Score=1139.43  Aligned_cols=426  Identities=59%  Similarity=1.052  Sum_probs=403.4

Q ss_pred             CCCCCCCCCCCceeeCCCCCeEEEeCeEE---------eeeccCceeEeecEEeecCCCceeeEEEeeeeeeEEeecCCC
Q 006052          236 IKPPFRQSLKAITVVQPDGPSFTIDGHMI---------SFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDL  306 (663)
Q Consensus       236 ~~~~~r~~lkp~~i~QPeG~sf~v~g~~v---------~f~~reGlvl~~v~~~D~r~~~~r~I~Yrlsl~Em~vpY~dp  306 (663)
                      +++++++++|||.|+||||+||+|+|++|         |||+|||||||+|+|+|+..+++|||+||||||||+||||||
T Consensus         4 ~~p~~~~~~kp~~i~QPeG~sf~v~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~dp   83 (441)
T d1w2za1           4 QSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDP   83 (441)
T ss_dssp             CCSCCCCCCCCCEEECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCC
T ss_pred             cCCCCCCCCCCceeECCCCCCEEEeCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCCCC
Confidence            45677999999999999999999999999         999999999999999999557899999999999999999999


Q ss_pred             ChhhhhcceeccCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCCeEEeccceEEEEecCCCceeeccccCCCCeeEe
Q 006052          307 TEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVR  386 (663)
Q Consensus       307 ~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~  386 (663)
                      +++|++|+|||+||||+|.+|++|++|||||++|+|||+++++++|+|++++|||||||+| +|++|||++++.++..++
T Consensus        84 ~~~~~~k~~~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d-~G~~~kH~~~~~~~~~~~  162 (441)
T d1w2za1          84 TEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIE  162 (441)
T ss_dssp             STTTTTCEECHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEC-CCEEEEEEECCSTTCCEE
T ss_pred             CchhhhceeEcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEecc-CCceeeeecccCCCcceE
Confidence            9999999999999999999999999999999999999999999999999999999999999 789999999998888888


Q ss_pred             eeeeceEEEEEEeEeecccceeEEEEEeeCccEEEEEeeeeeeeeeeeeeccCCCCccccccceeccCccccccceeEEe
Q 006052          387 EVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTY  466 (663)
Q Consensus       387 ~~r~~~~LVvr~i~TVgNYDYi~~~~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~  466 (663)
                      ++|++++||||+|+|||||||||+|+|||||+||+||||||||++++......+..+...||++|+|+++|++|||+|||
T Consensus       163 ~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~eV~aTGil~~~~~~~~~~~~~~~~~yGt~v~p~v~g~~HqH~f~~  242 (441)
T d1w2za1         163 ESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIY  242 (441)
T ss_dssp             EEEECCEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEE
T ss_pred             eeecceeEEEEEEEEecceeEEEEEEEecCceEEEEEEeeeEEEEeeecccccCccccCCcceeeccCccccceeeEEEE
Confidence            99999999999999999999999999999999999999999999876533222333456799999999999999999999


Q ss_pred             eeecCCCCCCCceEEEEEEEeecCCCCCCCceeEEEEEeeecChhhhhhhcCCCCcEEEEecCCCCCCCCCcceEEEecC
Q 006052          467 RLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPE  546 (663)
Q Consensus       467 RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~~~~~~~~~~~~tE~~a~~~~~~~~r~~~ivN~~~~n~~G~p~gYrl~p~  546 (663)
                      ||||||||.+|||+++|+++++++.+++|++..++++++++++|++|++.++.++|+|+|+|++++|++|+|+||||+|+
T Consensus       243 RlD~dIdG~~Nsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~v~N~~~~N~~G~p~gYkL~p~  322 (441)
T d1w2za1         243 YLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPA  322 (441)
T ss_dssp             EEEECTTSSCBEEEEEEEEEEECCSSSCSCSEEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECC
T ss_pred             EEecccCCCCCceEEEEeEeccCCCCCCCCcceEEEEEEEeechhhhhhccCcCcceEEEeCCCccCcCCCceeEEEccC
Confidence            99999999999999999999998776777777778889999999999888888889999999999999999999999999


Q ss_pred             CccccCCCCCChhhhccccccceeEEeeeCCCccCCCCcCccCCCCCCChhhhhcCCCceecCCeEEEEEeCcccCCCCC
Q 006052          547 GVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQE  626 (663)
Q Consensus       547 ~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~E  626 (663)
                      ++++++++++|+..+||+||+|+||||||+|+|+||+|.|++|+.++++|+.|+++||+|+|||||+|+|||+||+||+|
T Consensus       323 ~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~E  402 (441)
T d1w2za1         323 IPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQE  402 (441)
T ss_dssp             SCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGG
T ss_pred             CCCcccCCCCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcCCCcccCCCEEEEEeCCcccCCChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccceeeeEEEeCCCCCCCCCCCCCCCCCCCC
Q 006052          627 DFPVMPTLNGGFELRPSNFFESNPVLKVKQPKEEYS  662 (663)
Q Consensus       627 D~Pvmp~~~~~f~L~P~nFFd~nP~ld~p~~~~~~~  662 (663)
                      ||||||++++||+|||+|||++||+||+|++++..-
T Consensus       403 D~Pvmp~~~~gf~L~P~nFF~~nPald~~~~~~~~~  438 (441)
T d1w2za1         403 DFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAW  438 (441)
T ss_dssp             GSSSCCCEEEECEEEEESSSSSCTTTTCCCCCCCCT
T ss_pred             hcCCcceeeeeEEEECCCCCCCCCccCCCCcccccC
Confidence            999999999999999999999999999999987653
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure