Citrus Sinensis ID: 006091

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660--
MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNASTGSGSSSGGTDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYIH
ccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccHHHHHccHHHHHHHccccEEEEcccccccccccHHHcccccccEEEEEEEcccEEEEEEEEEEEcccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccEEEEcccHHHHHHHHHHHccccccccccccEEEEEccccccccccccccccccccHHHHccccccccccccccccccccccHHHHHHHHHccEEcccccHHHHHHcccccccccHHHHHHcccccEEEccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccEEEcccccccccHHHHHHccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccc
cccccccHHcccccccccccccccccEEccEEccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccHHHHcccccccccccccccccccccccEEEEEEEEcccccccccHHHHHcccHHHHHHccccEEEEEcccccccccHHHHHHHHcccEEEEEEEcccEEEEEEEEEEEcccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHcccHccccccccccccEEEEccHHHHHHHHHHHHHHccccHHHccEEEEEEEHHHHcccccHHHHHHccccHHHHHHHccccccccccccccccccHHHHHHHHHHccEEEEEcccHHHHHccccccccHHHHHHHccccEEEEEEccccccccccccccEEEccccccHcHHHHHHHHHHHHHcccccccccEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHEEcccccccccHHHHHHHHcccccEEEccccccccccccccccccccccccccEcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccc
MESLQVTRLLSWKSFLNTAAKAGTTRfrattqlgfpplskkatknGFLMIRRSftnastgsgsssggtdavsgnisshdsssppvedekdenkpgyllgqekdgsglvigfhfippsgdhevidsskdidgygvkkiedvegedkaqtrVSYNIVFVTaeaapysktgglgdvcgSLPVALAARghrvmvvspryfngtaadenFTLAKDLGCCMKICCFGGEQEIAFFHEyregvdwvfvdhpsyhrpgnpygdingafgdnqFRYTLLCYAAceaplvlplggftygekcIFLVNDWHAGLVPVLLaskyrphgvykdaRSILVIHNlshqgvepaatyknlglpsewygalewvfptwarthaldtgeAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITngiditewnpssdehiashysiddlsgkVQCKIALQKelglpirpdcpligfigrldyqKGIDLIRLAapeiladdiqfvmlgsgdpqfeswmrdteatykdkyrgwvgfnvpishritagcdillmpsrfepcglnqlyamrygtipvvhatgglrdtvenfnpfaregsgegtgwsflplsEESMLTALRFAIRTYREHKSSWEGlmrrgmekdytWENAAIQYEQVFewasidppyih
MESLQVTRLLSWKSFLNTAAKagttrfrattqlgfpplskkatknGFLMIRRSFTnastgsgsssggTDAVSGNisshdsssppvedekDENKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIedvegedkaqtrvSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRehkssweglmrrGMEKDYTWENAAIQYEQVFEWASIDPPYIH
MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNAstgsgsssggtDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYIH
*****VTRLLSWKSFLNTAAKAGTTRFRATTQLGFPP*******NGFLMI*****************************************************GSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASID*****
*********************************************************************************************************************************************************IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI******
MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTN***********************************NKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYIH
*****VTR*LSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKN***M***********************************************************************************************KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDP**I*
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNASTGSGSSSGGTDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYIH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query662 2.2.26 [Sep-21-2011]
Q9FNF2652 Starch synthase 1, chloro yes no 0.950 0.964 0.657 0.0
P93568641 Soluble starch synthase 1 N/A no 0.962 0.993 0.668 0.0
Q0DEC8641 Soluble starch synthase 1 yes no 0.793 0.819 0.743 0.0
A2Y9M4641 Soluble starch synthase 1 N/A no 0.793 0.819 0.741 0.0
Q43654647 Starch synthase 1, chloro N/A no 0.788 0.806 0.730 0.0
Q9MAC8792 Starch synthase 2, chloro no no 0.720 0.602 0.515 1e-145
Q43847767 Granule-bound starch synt N/A no 0.720 0.621 0.5 1e-136
Q43093752 Granule-bound starch synt N/A no 0.720 0.634 0.480 1e-135
Q7XE48749 Soluble starch synthase 2 no no 0.720 0.636 0.490 1e-135
Q6Z2T8694 Soluble starch synthase 2 no no 0.720 0.687 0.490 1e-134
>sp|Q9FNF2|SSY1_ARATH Starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS1 PE=2 SV=1 Back     alignment and function desciption
 Score =  914 bits (2362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/683 (65%), Positives = 531/683 (77%), Gaps = 54/683 (7%)

Query: 1   MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRSFTNASTG 60
           M SLQ++  + ++ F+          FR    LGFP              RR F   S G
Sbjct: 1   MASLQISGSVKFEPFVGFNR---IRHFRPIASLGFP------------RFRRRF---SIG 42

Query: 61  SGSSSGGTDAVSGNISSHDSSSPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSGDH 120
                  + + SG             D ++ ++  ++   E+DGSG V+GF   PP GD 
Sbjct: 43  RSLLLRRSSSFSG-------------DSRESDEERFITDAERDGSGSVLGFQLTPP-GDQ 88

Query: 121 EVIDSS-----------KDID-----GYGVKKIEDVE------GEDKAQTRVSYNIVFVT 158
           + + +S           + ID      +GV     VE      G    +  V  N+VFVT
Sbjct: 89  QTVSTSTGEITHHEEKKEAIDQIVMADFGVPGNRAVEEGAAEVGIPSGKAEVVNNLVFVT 148

Query: 159 AEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKIC 218
           +EAAPYSKTGGLGDVCGSLP+ALA RGHRVMV+SPRY NGTAAD+N+  AKDLG  + + 
Sbjct: 149 SEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIRVTVN 208

Query: 219 CFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAP 278
           CFGG QE++F+HEYR+GVDWVFVDH SYHRPGNPYGD  GAFGDNQFR+TLLC+AACEAP
Sbjct: 209 CFGGSQEVSFYHEYRDGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCHAACEAP 268

Query: 279 LVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPA 338
           LVLPLGGFTYGEK +FLVNDWHAGLVP+LLA+KYRP+GVYKDARSIL+IHNL+HQGVEPA
Sbjct: 269 LVLPLGGFTYGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPA 328

Query: 339 ATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEIT 398
           ATY NLGLPSEWYGA+ WVFPTWARTHALDTGEAVNVLKGAIVT+DR++TVS+GY+WEIT
Sbjct: 329 ATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEIT 388

Query: 399 TVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458
           TVEGGYGL ++LSSRKSV+NGITNGI++ EWNPS+DEHI  HYS DD+S K++CK+ALQK
Sbjct: 389 TVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKCKMALQK 448

Query: 459 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE 518
           ELGLPIRP+CP+IGFIGRLDYQKGIDLI+ A P+++ DDIQFVMLGSGDP++ESWMR  E
Sbjct: 449 ELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSME 508

Query: 519 ATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR 578
            TY+DK+RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH TGGLR
Sbjct: 509 ETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLR 568

Query: 579 DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDY 638
           DTVENFNP+A  G+G GTGW F PLS++SM++ALR A  TYRE+K SWEGLMRRGM ++Y
Sbjct: 569 DTVENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYREYKQSWEGLMRRGMTRNY 628

Query: 639 TWENAAIQYEQVFEWASIDPPYI 661
           +WENAA+QYEQVF+W  +DPPY+
Sbjct: 629 SWENAAVQYEQVFQWVFMDPPYV 651

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 1
>sp|P93568|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|Q0DEC8|SSY1_ORYSJ Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1 Back     alignment and function description
>sp|A2Y9M4|SSY1_ORYSI Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1 Back     alignment and function description
>sp|Q43654|SSY1_WHEAT Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2 Back     alignment and function description
>sp|Q9MAC8|SSY2_ARATH Starch synthase 2, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS2 PE=2 SV=1 Back     alignment and function description
>sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3 Back     alignment and function description
>sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|Q7XE48|SSY21_ORYSJ Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2 Back     alignment and function description
>sp|Q6Z2T8|SSY22_ORYSJ Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query662
224135151649 predicted protein [Populus trichocarpa] 0.939 0.958 0.751 0.0
157169067633 starch synthase isoform I [Manihot escul 0.951 0.995 0.696 0.0
356509243651 PREDICTED: soluble starch synthase, chlo 0.932 0.947 0.699 0.0
225455364633 PREDICTED: soluble starch synthase, chlo 0.853 0.892 0.765 0.0
302143910568 unnamed protein product [Vitis vinifera] 0.853 0.994 0.765 0.0
297808439655 hypothetical protein ARALYDRAFT_489289 [ 0.950 0.960 0.661 0.0
357463955655 Soluble starch synthase [Medicago trunca 0.962 0.972 0.679 0.0
15237934652 soluble starch synthase [Arabidopsis tha 0.950 0.964 0.657 0.0
47077341645 starch synthase I precursor [Phaseolus v 0.954 0.979 0.672 0.0
2829792641 RecName: Full=Soluble starch synthase 1, 0.962 0.993 0.668 0.0
>gi|224135151|ref|XP_002321996.1| predicted protein [Populus trichocarpa] gi|222868992|gb|EEF06123.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1001 bits (2589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/644 (75%), Positives = 548/644 (85%), Gaps = 22/644 (3%)

Query: 24  TTR--FRATTQLGFPPLSKKATKNGFLMIRRSFTNASTGSGSSSGGTDAVSGNISSHDSS 81
           TTR  FR   QLGF    ++  K G L+I RS        G S  G ++  GN +     
Sbjct: 23  TTRVGFRPRAQLGFGCFVRERYKYGNLVIARS--------GRSEVG-NSKDGNFA----- 68

Query: 82  SPPVEDEKDENKPGYLLGQEKDGSGLVIGFHFIPPSG---DHEVIDSSKDIDGYGVKKIE 138
              VE+EK E + G +LG E+D SG +IGF+ IPPSG      V++S +D    G ++ E
Sbjct: 69  ---VENEKKEKRGGLILGPERDSSGSIIGFNLIPPSGMDISFTVLESHEDATTGGTEEAE 125

Query: 139 DVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNG 198
           D+EG +K QTRV+YNIVFVT+EAAPYSKTGGLGDVCGSLP+ LAARGHRVMVVSPRY +G
Sbjct: 126 DIEGVEKVQTRVTYNIVFVTSEAAPYSKTGGLGDVCGSLPIVLAARGHRVMVVSPRYLHG 185

Query: 199 TAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDING 258
           + AD+NF  A +L C +K+ CFGGEQE+AFFHEYREGVDWVFVDHPSYHRPGNPYGD  G
Sbjct: 186 SPADKNFAGASELDCHIKVYCFGGEQEVAFFHEYREGVDWVFVDHPSYHRPGNPYGDSRG 245

Query: 259 AFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVY 318
           AFGDNQFR+ LLC+AACEAPLVLPLGG+TYGEKC+FLVNDWHAGLVPVLLASKYRP+GVY
Sbjct: 246 AFGDNQFRFALLCHAACEAPLVLPLGGYTYGEKCLFLVNDWHAGLVPVLLASKYRPYGVY 305

Query: 319 KDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKG 378
           KDAR+ILVIHNL+HQGVEPAATY NLGLPSEWYGAL WVFPTWARTHALDTGEAVN+LKG
Sbjct: 306 KDARTILVIHNLAHQGVEPAATYTNLGLPSEWYGALGWVFPTWARTHALDTGEAVNLLKG 365

Query: 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIA 438
           AIVT DR+LTVSKGY+WEITTVEGGYGLHE+LSSR+SVLNGITNGIDI EWNPSSD+HIA
Sbjct: 366 AIVTVDRILTVSKGYAWEITTVEGGYGLHELLSSRRSVLNGITNGIDIYEWNPSSDKHIA 425

Query: 439 SHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDI 498
           S+YS+DDLSGKVQCKIALQKELGLPI+PDCPLIGFIGRLDYQKGIDLIR A PE+L DD+
Sbjct: 426 SNYSVDDLSGKVQCKIALQKELGLPIKPDCPLIGFIGRLDYQKGIDLIRWATPELLEDDV 485

Query: 499 QFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLN 558
           QFVMLGSGDP +E WMR TE+TYKDK+RGWVGFN+PISH+ITAG DILLMPSRFEPCGLN
Sbjct: 486 QFVMLGSGDPLYEDWMRATESTYKDKFRGWVGFNIPISHKITAGADILLMPSRFEPCGLN 545

Query: 559 QLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 618
           QLYAMRYGT+PVVH TGGLRDTV+ F+P+++ G GEGTGW F PLS+ESML ALR AI T
Sbjct: 546 QLYAMRYGTVPVVHGTGGLRDTVQAFDPYSKGGLGEGTGWIFSPLSKESMLAALRVAIMT 605

Query: 619 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPPYIH 662
           YR+HKSSWEG+M+RGM KD TWENAA+ YEQVFEWA IDPPYI+
Sbjct: 606 YRDHKSSWEGIMKRGMVKDSTWENAAVHYEQVFEWAFIDPPYIN 649

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|157169067|gb|ABV25893.1| starch synthase isoform I [Manihot esculenta] Back     alignment and taxonomy information
>gi|356509243|ref|XP_003523360.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|225455364|ref|XP_002277372.1| PREDICTED: soluble starch synthase, chloroplastic/amyloplastic-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143910|emb|CBI23015.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297808439|ref|XP_002872103.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata] gi|297317940|gb|EFH48362.1| hypothetical protein ARALYDRAFT_489289 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357463955|ref|XP_003602259.1| Soluble starch synthase [Medicago truncatula] gi|355491307|gb|AES72510.1| Soluble starch synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15237934|ref|NP_197818.1| soluble starch synthase [Arabidopsis thaliana] gi|334187896|ref|NP_001190378.1| soluble starch synthase [Arabidopsis thaliana] gi|29337131|sp|Q9FNF2.1|SSY1_ARATH RecName: Full=Starch synthase 1, chloroplastic/amyloplastic; Short=AtSS1; Short=SSS; AltName: Full=Soluble starch synthase I; Flags: Precursor gi|10177090|dbj|BAB10396.1| soluble starch synthase [Arabidopsis thaliana] gi|22135791|gb|AAM91082.1| AT5g24300/MOP9_12 [Arabidopsis thaliana] gi|110742056|dbj|BAE98960.1| soluble starch synthase [Arabidopsis thaliana] gi|332005899|gb|AED93282.1| soluble starch synthase [Arabidopsis thaliana] gi|332005900|gb|AED93283.1| soluble starch synthase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|47077341|dbj|BAD18845.1| starch synthase I precursor [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|2829792|sp|P93568.1|SSY1_SOLTU RecName: Full=Soluble starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Soluble starch synthase I; Short=SS I; Flags: Precursor gi|1781353|emb|CAA71442.1| soluble starch (bacterial glycogen) synthase [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query662
TAIR|locus:2169749652 SS1 "starch synthase 1" [Arabi 0.972 0.987 0.661 2.3e-245
TAIR|locus:2102102792 SS2 "starch synthase 2" [Arabi 0.719 0.601 0.518 6.7e-134
TIGR_CMR|GSU_1023501 GSU_1023 "glycogen synthase" [ 0.519 0.686 0.409 1.6e-92
TAIR|locus:2037950610 GBSS1 "granule bound starch sy 0.770 0.836 0.387 2.2e-89
UNIPROTKB|Q42968609 WAXY "Granule-bound starch syn 0.732 0.796 0.4 1.6e-88
TIGR_CMR|GSU_3257484 GSU_3257 "glycogen synthase" [ 0.518 0.708 0.412 9.2e-68
TIGR_CMR|BA_5120476 BA_5120 "glycogen synthase" [B 0.513 0.714 0.394 2.5e-65
TAIR|locus:21419361040 SS4 "starch synthase 4" [Arabi 0.522 0.332 0.353 9.3e-62
UNIPROTKB|Q9KRB6484 glgA "Glycogen synthase" [Vibr 0.599 0.820 0.330 1.1e-57
TIGR_CMR|VC_1726484 VC_1726 "glycogen synthase" [V 0.599 0.820 0.330 1.1e-57
TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2364 (837.2 bits), Expect = 2.3e-245, P = 2.3e-245
 Identities = 442/668 (66%), Positives = 530/668 (79%)

Query:     1 MESLQVTRLLSWKSFLNTAAKAGTTRFRATTQLGFPPLSKKATKNGFLMIRRS--FTNAX 58
             M SLQ++  + ++ F+          FR    LGFP   ++ +    L++RRS  F+   
Sbjct:     1 MASLQISGSVKFEPFVGFNR---IRHFRPIASLGFPRFRRRFSIGRSLLLRRSSSFSGDS 57

Query:    59 XXXXXXXXXXDAV---SGNISSHDSSSPPVEDEKDENKPGYLLGQE--KDGSGLVIGFHF 113
                       DA    SG++     + PP + +      G +   E  K+    ++   F
Sbjct:    58 RESDEERFITDAERDGSGSVLGFQLT-PPGDQQTVSTSTGEITHHEEKKEAIDQIVMADF 116

Query:   114 IPPSGDHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDV 173
               P G+  V + + ++   G+          KA+  V  N+VFVT+EAAPYSKTGGLGDV
Sbjct:   117 GVP-GNRAVEEGAAEV---GIPS-------GKAE--VVNNLVFVTSEAAPYSKTGGLGDV 163

Query:   174 CGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 233
             CGSLP+ALA RGHRVMV+SPRY NGTAAD+N+  AKDLG  + + CFGG QE++F+HEYR
Sbjct:   164 CGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLGIRVTVNCFGGSQEVSFYHEYR 223

Query:   234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCI 293
             +GVDWVFVDH SYHRPGNPYGD  GAFGDNQFR+TLLC+AACEAPLVLPLGGFTYGEK +
Sbjct:   224 DGVDWVFVDHKSYHRPGNPYGDSKGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKSL 283

Query:   294 FLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGA 353
             FLVNDWHAGLVP+LLA+KYRP+GVYKDARSIL+IHNL+HQGVEPAATY NLGLPSEWYGA
Sbjct:   284 FLVNDWHAGLVPILLAAKYRPYGVYKDARSILIIHNLAHQGVEPAATYTNLGLPSEWYGA 343

Query:   354 LEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR 413
             + WVFPTWARTHALDTGEAVNVLKGAIVT+DR++TVS+GY+WEITTVEGGYGL ++LSSR
Sbjct:   344 VGWVFPTWARTHALDTGEAVNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSR 403

Query:   414 KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGF 473
             KSV+NGITNGI++ EWNPS+DEHI  HYS DD+S K++CK+ALQKELGLPIRP+CP+IGF
Sbjct:   404 KSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKCKMALQKELGLPIRPECPMIGF 463

Query:   474 IGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533
             IGRLDYQKGIDLI+ A P+++ DDIQFVMLGSGDP++ESWMR  E TY+DK+RGWVGFNV
Sbjct:   464 IGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNV 523

Query:   534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSG 593
             PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH TGGLRDTVENFNP+A  G+G
Sbjct:   524 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVENFNPYAEGGAG 583

Query:   594 EGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEW 653
              GTGW F PLS++SM++ALR A  TYRE+K SWEGLMRRGM ++Y+WENAA+QYEQVF+W
Sbjct:   584 TGTGWVFTPLSKDSMVSALRLAAATYREYKQSWEGLMRRGMTRNYSWENAAVQYEQVFQW 643

Query:   654 ASIDPPYI 661
               +DPPY+
Sbjct:   644 VFMDPPYV 651
GO:0005739 "mitochondrion" evidence=ISM
GO:0009058 "biosynthetic process" evidence=IEA
GO:0009250 "glucan biosynthetic process" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0009011 "starch synthase activity" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0010021 "amylopectin biosynthetic process" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0001666 "response to hypoxia" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TAIR|locus:2037950 GBSS1 "granule bound starch synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q42968 WAXY "Granule-bound starch synthase 1, chloroplastic/amyloplastic" [Oryza glaberrima (taxid:4538)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TAIR|locus:2141936 SS4 "starch synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FNF2SSY1_ARATH2, ., 4, ., 1, ., 2, 10.65730.95010.9647yesno
Q0DEC8SSY1_ORYSJ2, ., 4, ., 1, ., 2, 10.74380.79300.8190yesno
P93568SSY1_SOLTU2, ., 4, ., 1, ., 2, 10.66860.96220.9937N/Ano
Q43654SSY1_WHEAT2, ., 4, ., 1, ., 2, 10.73090.78850.8068N/Ano
A2Y9M4SSY1_ORYSI2, ., 4, ., 1, ., 2, 10.74190.79300.8190N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.1.210.991
4th Layer2.4.1.246LOW CONFIDENCE prediction!
3rd Layer2.4.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XV.361.1
hypothetical protein (586 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_LG_XIV000240
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (445 aa)
• •  •• 0.970
gw1.V.1420.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (475 aa)
• •  •• 0.967
eugene3.00141188
RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (523 aa)
• •  •• 0.964
estExt_Genewise1_v1.C_LG_IV2986
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (819 aa)
• •  •• 0.962
gw1.170.63.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27) (428 aa)
• •  •• 0.961
fgenesh4_pg.C_LG_V001651
SubName- Full=Starch branching enzyme I; (701 aa)
•  • •• 0.961
gw1.VII.320.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27) (434 aa)
• •  •• 0.961
estExt_fgenesh4_pg.C_LG_IX1158
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (853 aa)
• •  •• 0.961
estExt_fgenesh4_pm.C_LG_II0158
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (528 aa)
• •  •• 0.960
estExt_Genewise1_v1.C_LG_VIII1252
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (528 aa)
• •  •• 0.960

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query662
cd03791476 cd03791, GT1_Glycogen_synthase_DULL1_like, This fa 0.0
TIGR02095473 TIGR02095, glgA, glycogen/starch synthase, ADP-glu 0.0
PRK00654466 PRK00654, glgA, glycogen synthase; Provisional 1e-177
COG0297487 COG0297, GlgA, Glycogen synthase [Carbohydrate tra 1e-144
PRK14099485 PRK14099, PRK14099, glycogen synthase; Provisional 1e-107
PRK14098489 PRK14098, PRK14098, glycogen synthase; Provisional 4e-87
pfam08323234 pfam08323, Glyco_transf_5, Starch synthase catalyt 3e-74
PLN02939977 PLN02939, PLN02939, transferase, transferring glyc 5e-71
PLN023161036 PLN02316, PLN02316, synthase/transferase 4e-59
cd03801374 cd03801, GT1_YqgM_like, This family is most closel 4e-20
COG0438381 COG0438, RfaG, Glycosyltransferase [Cell envelope 4e-17
cd03798377 cd03798, GT1_wlbH_like, This family is most closel 2e-16
pfam00534158 pfam00534, Glycos_transf_1, Glycosyl transferases 1e-14
cd01635229 cd01635, Glycosyltransferase_GTB_type, Glycosyltra 4e-13
cd03800398 cd03800, GT1_Sucrose_synthase, This family is most 8e-12
cd03808359 cd03808, GT1_cap1E_like, This family is most close 4e-11
cd03821375 cd03821, GT1_Bme6_like, This family is most closel 1e-10
TIGR02149388 TIGR02149, glgA_Coryne, glycogen synthase, Coryneb 4e-10
cd03807365 cd03807, GT1_WbnK_like, This family is most closel 3e-09
cd03814364 cd03814, GT1_like_2, This family is most closely r 7e-09
cd03823359 cd03823, GT1_ExpE7_like, This family is most close 1e-07
cd03795357 cd03795, GT1_like_4, This family is most closely r 4e-07
TIGR04063397 TIGR04063, stp3, PEP-CTERM/exosortase A-associated 9e-07
pfam13692134 pfam13692, Glyco_trans_1_4, Glycosyl transferases 3e-06
cd03794394 cd03794, GT1_wbuB_like, This family is most closel 3e-06
cd03811353 cd03811, GT1_WabH_like, This family is most closel 5e-06
cd03817374 cd03817, GT1_UGDG_like, This family is most closel 2e-05
TIGR04157406 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG 9e-05
cd03809365 cd03809, GT1_mtfB_like, This family is most closel 9e-05
cd03820348 cd03820, GT1_amsD_like, This family is most closel 2e-04
cd03825365 cd03825, GT1_wcfI_like, This family is most closel 6e-04
PLN02871465 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu 9e-04
cd03822366 cd03822, GT1_ecORF704_like, This family is most cl 0.003
>gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information 
 Score =  599 bits (1546), Expect = 0.0
 Identities = 211/501 (42%), Positives = 288/501 (57%), Gaps = 25/501 (4%)

Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
            ++FV +E AP++KTGGLGDV G+LP ALA  GH V V+ P+Y  G   DE       L 
Sbjct: 1   KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKY--GRILDELRGQLLVLR 58

Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCY 272
               +   G  + +  F    +GV   F+D+P Y      Y D    + DN  R+ L   
Sbjct: 59  LFG-VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSR 117

Query: 273 AACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSH 332
           AA E    L        +  I   +DWH GLVP LL  KY     +K+ +++  IHNL++
Sbjct: 118 AALELLRRL------GWKPDIIHCHDWHTGLVPALLKEKYADPF-FKNIKTVFTIHNLAY 170

Query: 333 QGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392
           QGV P    ++LGLP E                 L+    VN LK  IV AD + TVS  
Sbjct: 171 QGVFPLEALEDLGLPWEEL----------FHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220

Query: 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 452
           Y+ EI T E G GL  +L +R   L+GI NGID   WNP++D H+ ++YS DDL GK + 
Sbjct: 221 YAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAEN 280

Query: 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFES 512
           K ALQ+ELGLP+ PD PL GF+GRL  QKGIDL+  A PE+L    Q V+LGSGDP++E 
Sbjct: 281 KAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEE 340

Query: 513 WMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572
            +R+  A Y  +    +G++  ++H I AG D  LMPSRFEPCGL Q+YAMRYGT+P+V 
Sbjct: 341 ALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVR 400

Query: 573 ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRR 632
           ATGGL DTV ++N       GEGTG+ F   + +++L ALR A+  YR+   +W  L R 
Sbjct: 401 ATGGLADTVIDYNEDT----GEGTGFVFEGYNADALLAALRRALALYRD-PEAWRKLQRN 455

Query: 633 GMEKDYTWENAAIQYEQVFEW 653
            M +D++W+ +A +Y +++  
Sbjct: 456 AMAQDFSWDRSAKEYLELYRS 476

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476
>gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type Back     alignment and domain information
>gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional Back     alignment and domain information
>gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain Back     alignment and domain information
>gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups Back     alignment and domain information
>gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase Back     alignment and domain information
>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 Back     alignment and domain information
>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family Back     alignment and domain information
>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family Back     alignment and domain information
>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 Back     alignment and domain information
>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system Back     alignment and domain information
>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 662
PLN02939977 transferase, transferring glycosyl groups 100.0
PRK14099485 glycogen synthase; Provisional 100.0
PRK14098489 glycogen synthase; Provisional 100.0
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 100.0
PRK00654466 glgA glycogen synthase; Provisional 100.0
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 100.0
PLN023161036 synthase/transferase 100.0
COG0297487 GlgA Glycogen synthase [Carbohydrate transport and 100.0
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 100.0
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 100.0
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 100.0
PRK10307412 putative glycosyl transferase; Provisional 100.0
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 100.0
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 100.0
TIGR02470784 sucr_synth sucrose synthase. This model represents 100.0
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 100.0
cd03796398 GT1_PIG-A_like This family is most closely related 100.0
cd04962371 GT1_like_5 This family is most closely related to 100.0
PLN00142815 sucrose synthase 100.0
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 100.0
cd03818396 GT1_ExpC_like This family is most closely related 100.0
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 100.0
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 100.0
cd03800398 GT1_Sucrose_synthase This family is most closely r 100.0
PRK10125405 putative glycosyl transferase; Provisional 100.0
cd03805392 GT1_ALG2_like This family is most closely related 100.0
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 100.0
cd03802335 GT1_AviGT4_like This family is most closely relate 100.0
cd04955363 GT1_like_6 This family is most closely related to 100.0
cd03819355 GT1_WavL_like This family is most closely related 100.0
cd04951360 GT1_WbdM_like This family is most closely related 100.0
PLN02846462 digalactosyldiacylglycerol synthase 100.0
cd03825365 GT1_wcfI_like This family is most closely related 100.0
cd04299778 GT1_Glycogen_Phosphorylase_like This family is mos 100.0
cd03814364 GT1_like_2 This family is most closely related to 100.0
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 100.0
cd03807365 GT1_WbnK_like This family is most closely related 100.0
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 100.0
KOG1111426 consensus N-acetylglucosaminyltransferase complex, 100.0
cd03813475 GT1_like_3 This family is most closely related to 100.0
cd03812358 GT1_CapH_like This family is most closely related 100.0
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 100.0
cd03823359 GT1_ExpE7_like This family is most closely related 100.0
cd03821375 GT1_Bme6_like This family is most closely related 100.0
cd03809365 GT1_mtfB_like This family is most closely related 100.0
cd03795357 GT1_like_4 This family is most closely related to 100.0
cd03794394 GT1_wbuB_like This family is most closely related 100.0
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 100.0
cd03817374 GT1_UGDG_like This family is most closely related 100.0
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 100.0
cd03822366 GT1_ecORF704_like This family is most closely rela 100.0
cd03808359 GT1_cap1E_like This family is most closely related 100.0
cd03801374 GT1_YqgM_like This family is most closely related 100.0
cd03820348 GT1_amsD_like This family is most closely related 100.0
cd03816415 GT1_ALG1_like This family is most closely related 99.98
cd03798377 GT1_wlbH_like This family is most closely related 99.97
PLN02949463 transferase, transferring glycosyl groups 99.97
cd03806419 GT1_ALG11_like This family is most closely related 99.97
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 99.97
cd03811353 GT1_WabH_like This family is most closely related 99.97
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 99.96
cd03804351 GT1_wbaZ_like This family is most closely related 99.96
PLN02501794 digalactosyldiacylglycerol synthase 99.96
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 99.96
PLN02275371 transferase, transferring glycosyl groups 99.96
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 99.96
cd04946407 GT1_AmsK_like This family is most closely related 99.96
PHA01633335 putative glycosyl transferase group 1 99.96
PHA01630331 putative group 1 glycosyl transferase 99.95
PRK00726357 murG undecaprenyldiphospho-muramoylpentapeptide be 99.94
cd04949372 GT1_gtfA_like This family is most closely related 99.94
cd03788460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 99.93
TIGR02400456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 99.93
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 99.92
cd03785350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 99.92
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.9
PRK13609380 diacylglycerol glucosyltransferase; Provisional 99.89
PRK05749425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 99.88
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 99.87
cd04950373 GT1_like_1 Glycosyltransferases catalyze the trans 99.87
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 99.85
PLN02605382 monogalactosyldiacylglycerol synthase 99.85
KOG0853495 consensus Glycosyltransferase [Cell wall/membrane/ 99.83
TIGR02398487 gluc_glyc_Psyn glucosylglycerol-phosphate synthase 99.83
PRK13608391 diacylglycerol glucosyltransferase; Provisional 99.83
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 99.82
PRK00025380 lpxB lipid-A-disaccharide synthase; Reviewed 99.76
PLN03064 934 alpha,alpha-trehalose-phosphate synthase (UDP-form 99.76
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 99.75
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 99.72
COG0438381 RfaG Glycosyltransferase [Cell envelope biogenesis 99.72
cd03786363 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th 99.72
TIGR00236365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 99.7
PF05693633 Glycogen_syn: Glycogen synthase; InterPro: IPR0086 99.64
KOG2941444 consensus Beta-1,4-mannosyltransferase [Posttransl 99.55
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 99.51
TIGR00215385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 99.51
PRK10117474 trehalose-6-phosphate synthase; Provisional 99.46
PF00982474 Glyco_transf_20: Glycosyltransferase family 20; In 99.44
PF13439177 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 99.42
TIGR03713519 acc_sec_asp1 accessory Sec system protein Asp1. Th 99.39
PF13579160 Glyco_trans_4_4: Glycosyl transferase 4-like domai 99.39
COG0380486 OtsA Trehalose-6-phosphate synthase [Carbohydrate 99.38
PLN02205 854 alpha,alpha-trehalose-phosphate synthase [UDP-form 99.34
PRK12446352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 99.17
COG0058750 GlgP Glucan phosphorylase [Carbohydrate transport 99.15
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 99.12
PF09314185 DUF1972: Domain of unknown function (DUF1972); Int 99.08
COG0707357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 99.05
PRK14986815 glycogen phosphorylase; Provisional 99.05
TIGR02919438 accessory Sec system glycosyltransferase GtfB. Mem 98.94
TIGR02093794 P_ylase glycogen/starch/alpha-glucan phosphorylase 98.89
PRK14985798 maltodextrin phosphorylase; Provisional 98.87
cd04300797 GT1_Glycogen_Phosphorylase This is a family of oli 98.74
PF13477139 Glyco_trans_4_2: Glycosyl transferase 4-like 98.68
PF13528318 Glyco_trans_1_3: Glycosyl transferase family 1 98.48
PF00343713 Phosphorylase: Carbohydrate phosphorylase; InterPr 98.47
cd03784401 GT1_Gtf_like This family includes the Gtfs, a grou 98.46
TIGR03492396 conserved hypothetical protein. This protein famil 98.43
TIGR03590279 PseG pseudaminic acid biosynthesis-associated prot 98.42
KOG3742692 consensus Glycogen synthase [Carbohydrate transpor 98.4
TIGR01426392 MGT glycosyltransferase, MGT family. This model de 98.38
TIGR03568365 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, 98.34
PF04007335 DUF354: Protein of unknown function (DUF354); Inte 98.3
PF02350346 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; 98.13
COG1519419 KdtA 3-deoxy-D-manno-octulosonic-acid transferase 98.11
COG0763381 LpxB Lipid A disaccharide synthetase [Cell envelop 97.95
PF02684373 LpxB: Lipid-A-disaccharide synthetase; InterPro: I 97.87
PRK01021608 lpxB lipid-A-disaccharide synthase; Reviewed 97.77
TIGR00661321 MJ1255 conserved hypothetical protein. This model 97.72
PF13844468 Glyco_transf_41: Glycosyl transferase family 41; P 97.6
COG1819406 Glycosyl transferases, related to UDP-glucuronosyl 97.54
COG1817346 Uncharacterized protein conserved in archaea [Func 97.53
PF00862550 Sucrose_synth: Sucrose synthase; InterPro: IPR0003 97.51
COG3914620 Spy Predicted O-linked N-acetylglucosamine transfe 97.48
PF12000171 Glyco_trans_4_3: Gkycosyl transferase family 4 gro 97.46
COG4641373 Uncharacterized protein conserved in bacteria [Fun 97.32
COG0381383 WecB UDP-N-acetylglucosamine 2-epimerase [Cell env 97.27
COG4671400 Predicted glycosyl transferase [General function p 97.23
PRK02797322 4-alpha-L-fucosyltransferase; Provisional 96.99
PRK14089347 ipid-A-disaccharide synthase; Provisional 96.97
KOG1050 732 consensus Trehalose-6-phosphate synthase component 96.89
PRK10017426 colanic acid biosynthesis protein; Provisional 96.8
PF11997268 DUF3492: Domain of unknown function (DUF3492); Int 96.58
PF07429360 Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc 95.81
PHA03392507 egt ecdysteroid UDP-glucosyltransferase; Provision 95.06
PF04464369 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate 94.76
PLN02448459 UDP-glycosyltransferase family protein 93.5
PF06258311 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP 92.9
PLN03004451 UDP-glycosyltransferase 91.93
PLN02210456 UDP-glucosyl transferase 91.25
PF11440355 AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 91.12
PLN02670472 transferase, transferring glycosyl groups 91.02
PLN02863477 UDP-glucoronosyl/UDP-glucosyl transferase family p 90.97
PLN02562448 UDP-glycosyltransferase 90.97
TIGR02195334 heptsyl_trn_II lipopolysaccharide heptosyltransfer 90.81
PLN02173449 UDP-glucosyl transferase family protein 90.63
PLN02554481 UDP-glycosyltransferase family protein 89.69
PLN03007482 UDP-glucosyltransferase family protein 89.47
COG3980318 spsG Spore coat polysaccharide biosynthesis protei 89.18
TIGR02193319 heptsyl_trn_I lipopolysaccharide heptosyltransfera 89.12
PLN02410451 UDP-glucoronosyl/UDP-glucosyl transferase family p 88.23
PLN02167475 UDP-glycosyltransferase family protein 87.96
COG3660329 Predicted nucleoside-diphosphate-sugar epimerase [ 87.89
PRK10422352 lipopolysaccharide core biosynthesis protein; Prov 87.85
PLN02207468 UDP-glycosyltransferase 87.68
PF01075247 Glyco_transf_9: Glycosyltransferase family 9 (hept 87.54
TIGR03609298 S_layer_CsaB polysaccharide pyruvyl transferase Cs 87.5
PLN00164480 glucosyltransferase; Provisional 87.02
PF0828890 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP 85.99
PLN02555480 limonoid glucosyltransferase 85.94
PF04101167 Glyco_tran_28_C: Glycosyltransferase family 28 C-t 85.91
PLN02208442 glycosyltransferase family protein 85.41
PF00201500 UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera 84.65
PLN02152455 indole-3-acetate beta-glucosyltransferase 84.62
PRK10964322 ADP-heptose:LPS heptosyl transferase I; Provisiona 84.52
PF05159269 Capsule_synth: Capsule polysaccharide biosynthesis 83.99
PF12038168 DUF3524: Domain of unknown function (DUF3524); Int 83.91
cd03789279 GT1_LPS_heptosyltransferase Lipopolysaccharide hep 81.74
PLN02992481 coniferyl-alcohol glucosyltransferase 81.13
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information 
Probab=100.00  E-value=2.3e-65  Score=582.18  Aligned_cols=488  Identities=33%  Similarity=0.539  Sum_probs=397.4

Q ss_pred             ccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceEE
Q 006091          147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI  226 (662)
Q Consensus       147 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  226 (662)
                      +++.+|||+||+.+..|+.++||++.++..|+++|+++||+|.||+|.|......  .............+.+.|.....
T Consensus       477 ~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~--~~~~~~~~~~~~~~~~~g~~~~~  554 (977)
T PLN02939        477 GTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYD--QIRNLKVLDVVVESYFDGNLFKN  554 (977)
T ss_pred             CCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChh--hhhcccccceEEEEeecCceeEE
Confidence            3567899999999999999999999999999999999999999999999764311  00000000112222233333456


Q ss_pred             EEEEEeeCCceEEEEeCC---CCCCCCCCCCCCCCCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcch
Q 006091          227 AFFHEYREGVDWVFVDHP---SYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL  303 (662)
Q Consensus       227 ~~~~~~~~gv~v~~i~~~---~~~~~~~~y~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l  303 (662)
                      .++....+|+++|+++.+   .|+.++.+|+     +.|+..||.+|++++++.+..+   +|   +|||||||+|++++
T Consensus       555 ~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg-----~~Dn~~RF~~FsrAaLe~~~~~---~~---~PDIIH~HDW~TaL  623 (977)
T PLN02939        555 KIWTGTVEGLPVYFIEPQHPSKFFWRAQYYG-----EHDDFKRFSYFSRAALELLYQS---GK---KPDIIHCHDWQTAF  623 (977)
T ss_pred             EEEEEEECCeeEEEEecCCchhccCCCCCCC-----CccHHHHHHHHHHHHHHHHHhc---CC---CCCEEEECCccHHH
Confidence            778888899999999853   2666667775     3699999999999999987654   24   79999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhc
Q 006091          304 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA  383 (662)
Q Consensus       304 ~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a  383 (662)
                      ++.++...+...+ +.++|+|+|+|++.+||.++...+..+|++..++....+.-        ..+...+++++.++.+|
T Consensus       624 V~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le--------~~~~~~iN~LK~GIv~A  694 (977)
T PLN02939        624 VAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQ--------DNAHGRINVVKGAIVYS  694 (977)
T ss_pred             HHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhh--------hccCCchHHHHHHHHhC
Confidence            8655554332222 36789999999999999998877778888876653211110        00246789999999999


Q ss_pred             CEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCC
Q 006091          384 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLP  463 (662)
Q Consensus       384 d~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~  463 (662)
                      |.|+|||+.+++++.+ .+|.||+..+..+..++.+|+||||++.|.|..+..+..+|+.+++.+|..|+..+++++|++
T Consensus       695 D~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~  773 (977)
T PLN02939        695 NIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLS  773 (977)
T ss_pred             CeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCC
Confidence            9999999999999998 788999999998999999999999999999999999999999999999999999999999998


Q ss_pred             CC-CCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCC-hhhHHHHHHHHhhcC--CcEEEEcCCChHHHHHH
Q 006091          464 IR-PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATYK--DKYRGWVGFNVPISHRI  539 (662)
Q Consensus       464 ~~-~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~-~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l  539 (662)
                      .+ ++.++|+|+||+.++||++.+++|+..+...+++|+|+|+|+ +.++..++.+.....  .++.....+++...+.+
T Consensus       774 ~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~I  853 (977)
T PLN02939        774 SADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSI  853 (977)
T ss_pred             cccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHH
Confidence            43 457899999999999999999999998877789999999995 344455555555442  34544445577767789


Q ss_pred             HHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHh
Q 006091          540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY  619 (662)
Q Consensus       540 l~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~  619 (662)
                      |+.||+||+||++|+||++++|||+||+|||++++||+.|+|.+++..+. ..++.||++|++.|+++++++|.+++..+
T Consensus       854 YAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i-~~eg~NGfLf~~~D~eaLa~AL~rAL~~~  932 (977)
T PLN02939        854 YAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETI-PVELRNGFTFLTPDEQGLNSALERAFNYY  932 (977)
T ss_pred             HHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCcccc-ccCCCceEEecCCCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999987544331 12257999999999999999999998877


Q ss_pred             hhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhCC
Q 006091          620 REHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDP  658 (662)
Q Consensus       620 ~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~~~~  658 (662)
                      ..+++.|.+|+++++.++|||+.++++|+++|++++...
T Consensus       933 ~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~~  971 (977)
T PLN02939        933 KRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVARA  971 (977)
T ss_pred             ccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence            678999999999988899999999999999999987643

>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>PLN02846 digalactosyldiacylglycerol synthase Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 Back     alignment and domain information
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>PRK10117 trehalose-6-phosphate synthase; Provisional Back     alignment and domain information
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A Back     alignment and domain information
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 Back     alignment and domain information
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A Back     alignment and domain information
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14986 glycogen phosphorylase; Provisional Back     alignment and domain information
>TIGR02919 accessory Sec system glycosyltransferase GtfB Back     alignment and domain information
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>PRK14985 maltodextrin phosphorylase; Provisional Back     alignment and domain information
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin Back     alignment and domain information
>TIGR03492 conserved hypothetical protein Back     alignment and domain information
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG Back     alignment and domain information
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01426 MGT glycosyltransferase, MGT family Back     alignment and domain information
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing Back     alignment and domain information
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length Back     alignment and domain information
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 Back     alignment and domain information
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>TIGR00661 MJ1255 conserved hypothetical protein Back     alignment and domain information
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A Back     alignment and domain information
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] Back     alignment and domain information
>COG1817 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 Back     alignment and domain information
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria Back     alignment and domain information
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG4671 Predicted glycosyl transferase [General function prediction only] Back     alignment and domain information
>PRK02797 4-alpha-L-fucosyltransferase; Provisional Back     alignment and domain information
>PRK14089 ipid-A-disaccharide synthase; Provisional Back     alignment and domain information
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10017 colanic acid biosynthesis protein; Provisional Back     alignment and domain information
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes Back     alignment and domain information
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) Back     alignment and domain information
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional Back     alignment and domain information
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria Back     alignment and domain information
>PLN02448 UDP-glycosyltransferase family protein Back     alignment and domain information
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins Back     alignment and domain information
>PLN03004 UDP-glycosyltransferase Back     alignment and domain information
>PLN02210 UDP-glucosyl transferase Back     alignment and domain information
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E Back     alignment and domain information
>PLN02670 transferase, transferring glycosyl groups Back     alignment and domain information
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information
>PLN02562 UDP-glycosyltransferase Back     alignment and domain information
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II Back     alignment and domain information
>PLN02173 UDP-glucosyl transferase family protein Back     alignment and domain information
>PLN02554 UDP-glycosyltransferase family protein Back     alignment and domain information
>PLN03007 UDP-glucosyltransferase family protein Back     alignment and domain information
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I Back     alignment and domain information
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein Back     alignment and domain information
>PLN02167 UDP-glycosyltransferase family protein Back     alignment and domain information
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional Back     alignment and domain information
>PLN02207 UDP-glycosyltransferase Back     alignment and domain information
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB Back     alignment and domain information
>PLN00164 glucosyltransferase; Provisional Back     alignment and domain information
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins Back     alignment and domain information
>PLN02555 limonoid glucosyltransferase Back     alignment and domain information
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PLN02208 glycosyltransferase family protein Back     alignment and domain information
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule Back     alignment and domain information
>PLN02152 indole-3-acetate beta-glucosyltransferase Back     alignment and domain information
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional Back     alignment and domain information
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT Back     alignment and domain information
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes Back     alignment and domain information
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) Back     alignment and domain information
>PLN02992 coniferyl-alcohol glucosyltransferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query662
3vue_A536 Crystal Structure Of Rice Granule Bound Starch Synt 7e-91
3d1j_A477 Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 1e-71
2qzs_A485 Crystal Structure Of Wild-Type E.Coli Gs In Complex 6e-71
3cop_A485 Crystal Structure Of E.Coli Gs Mutant E377a In Comp 3e-70
1rzu_A485 Crystal Structure Of The Glycogen Synthase From A. 7e-70
1rzv_A485 Crystal Structure Of The Glycogen Synthase From Agr 4e-67
3fro_A439 Crystal Structure Of Pyrococcus Abyssi Glycogen Syn 2e-19
2bis_A440 Structure Of Glycogen Synthase From Pyrococcus Abys 2e-19
3l01_A428 Crystal Structure Of Monomeric Glycogen Synthase Fr 3e-19
2bfw_A200 Structure Of The C Domain Of Glycogen Synthase From 3e-15
3okc_A394 Crystal Structure Of Corynebacterium Glutamicum Pim 5e-05
3oka_A381 Crystal Structure Of Corynebacterium Glutamicum Pim 6e-05
>pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 Back     alignment and structure 
Iteration: 1

 Score =  331 bits (849), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 206/516 (39%), Positives = 289/516 (56%), Gaps = 35/516 (6%)
Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
           N+VFV AE AP+SKTGGLGDV G LP A+AA GHRVMV+SPRY       + +  A D  
Sbjct: 11  NVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY-------DQYKDAWDTS 63
Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-----HRPGNP-YGDINGA-FGDNQF 265
              +I      + + FFH Y+ GVD VF+DHPS+      + G   YG   G  + DNQ 
Sbjct: 64  VVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQM 123
Query: 266 RYTLLCYAACEAPLVLPLGGF-----TYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKD 320
           R++LLC AA EAP +L L        TYGE  +F+ NDWH G +   L + Y+P+G+Y++
Sbjct: 124 RFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRN 183
Query: 321 ARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT---GEAVNVLK 377
           A+    IHN+S+QG      Y  L L   +  + +++          DT   G  +N +K
Sbjct: 184 AKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFI-------DGYDTPVEGRKINWMK 236
Query: 378 GAIVTADRLLTVSKGYSWE-ITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEH 436
             I+ ADR+LTVS  Y+ E I+ +  G  L  I+  R + + GI NG+D++EW+PS D++
Sbjct: 237 AGILEADRVLTVSPYYAEELISGIARGCELDNIM--RLTGITGIVNGMDVSEWDPSKDKY 294
Query: 437 IASHY-SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA 495
           I + Y +   +  K   K ALQ E GLP+    PLI FIGRL+ QKG D++  A PE++ 
Sbjct: 295 ITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ 354
Query: 496 DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPC 555
           +D+Q V+LG+G  +FE  ++  E  Y  K R  V FN P++H I AG D+L +PSRFEPC
Sbjct: 355 EDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPC 414
Query: 556 GLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 615
           GL QL  MRYGT     +TGGL DTV         G          P   + +   L+ A
Sbjct: 415 GLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474
Query: 616 IRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 651
           I+       ++E ++R  M +D +W+  A  +E V 
Sbjct: 475 IKVV--GTPAYEEMVRNCMNQDLSWKGPAKNWENVL 508
>pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 Back     alignment and structure
>pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 Back     alignment and structure
>pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 Back     alignment and structure
>pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 Back     alignment and structure
>pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 Back     alignment and structure
>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 Back     alignment and structure
>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 Back     alignment and structure
>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 Back     alignment and structure
>pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 Back     alignment and structure
>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394 Back     alignment and structure
>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query662
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 0.0
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 0.0
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 0.0
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 1e-100
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 2e-26
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 1e-21
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 7e-21
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 2e-20
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 3e-19
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 1e-18
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 4e-17
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 6e-14
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 2e-12
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 5e-12
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 6e-12
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 2e-11
3nb0_A 725 Glycogen [starch] synthase isoform 2; glycogen syn 8e-11
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 5e-09
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 3e-08
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 Back     alignment and structure
 Score =  665 bits (1718), Expect = 0.0
 Identities = 166/514 (32%), Positives = 252/514 (49%), Gaps = 35/514 (6%)

Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
            ++ V +E  P  KTGGL DV G+LP A  A G    V+ P +       +      D  
Sbjct: 2   QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF------PDIRRGVTDAQ 55

Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDING-AFGDNQFRYTLL 270
              +   F G   +     +  GV    +D P    RPG+PY D N  A+ DN  R+ LL
Sbjct: 56  VVSRRDTFAGHITL--LFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALL 113

Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
            +   E    L           +   +DWHAGL P  LA++ RP      A+S+  +HNL
Sbjct: 114 GWVGAEMASGLDPFW----RPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNL 163

Query: 331 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390
           ++QG+  A    ++ LP  ++             H L+    ++ LK  +  AD +  VS
Sbjct: 164 AYQGMFYAHHMNDIQLPWSFF-----------NIHGLEFNGQISFLKAGLYYADHITAVS 212

Query: 391 KGYSWEITTVEGGYGLHEILSSR--KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 448
             Y+ EIT  +  YG+  +L  R  +  L+G+ NG+D   W+P +D  +AS Y+ D L  
Sbjct: 213 PTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED 272

Query: 449 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP 508
           K + K  LQ  +GL +    PL   + RL  QKG+DL+  A P +L    Q  +LG+GDP
Sbjct: 273 KAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP 332

Query: 509 QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI 568
             +       A Y  +    +G++   SHRI  G D++L+PSRFEPCGL QLY ++YGT+
Sbjct: 333 VLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL 392

Query: 569 PVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 628
           P+V  TGGL DTV + +       G  +G+ F   +  S+L A+R A   +    S W  
Sbjct: 393 PLVRRTGGLADTVSDCSLEN-LADGVASGFVFEDSNAWSLLRAIRRAFVLWS-RPSLWRF 450

Query: 629 LMRRGMEKDYTWENAAIQYEQVFEWASIDPPYIH 662
           + R+ M  D++W+ AA  Y +++    ++  + H
Sbjct: 451 VQRQAMAMDFSWQVAAKSYRELYYRLKLEHHHHH 484
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query662
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 100.0
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 100.0
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 100.0
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 100.0
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 100.0
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 100.0
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 100.0
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 100.0
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 100.0
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 100.0
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 100.0
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 100.0
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 100.0
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 100.0
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 100.0
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 99.97
2hy7_A406 Glucuronosyltransferase GUMK; glycosyltransferases 99.96
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 99.96
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 99.95
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 99.95
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 99.95
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 99.95
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.94
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 99.94
3t5t_A496 Putative glycosyltransferase; GTB fold, pseudoglyc 99.93
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 99.92
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 99.91
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 99.89
1v4v_A376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 99.89
2xci_A374 KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci 99.85
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 99.85
3otg_A412 CALG1; calicheamicin, TDP, structural genomics, PS 99.77
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 99.74
3dzc_A396 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.72
3ot5_A403 UDP-N-acetylglucosamine 2-epimerase; structural ge 99.72
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 99.66
2iyf_A430 OLED, oleandomycin glycosyltransferase; antibiotic 99.66
4fzr_A398 SSFS6; structural genomics, PSI-biology, protein s 99.64
3ia7_A402 CALG4; glycosysltransferase, calicheamicin, enediy 99.59
3oti_A398 CALG3; calicheamicin, TDP, structural genomics, PS 99.55
3tsa_A391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 99.54
3rsc_A415 CALG2; TDP, enediyne, structural genomics, PSI-2, 99.53
2p6p_A384 Glycosyl transferase; X-RAY-diffraction,urdamycina 99.49
4hwg_A385 UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc 99.38
2yjn_A441 ERYCIII, glycosyltransferase; transferase, cytochr 99.18
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 99.17
2iya_A424 OLEI, oleandomycin glycosyltransferase; carbohydra 99.16
3h4t_A404 Glycosyltransferase GTFA, glycosyltransferase; van 99.03
4amg_A400 Snogd; transferase, polyketide biosynthesis, GT1 f 98.91
1rrv_A416 Glycosyltransferase GTFD; GT-B, glycosyltransferas 98.72
3q3e_A631 HMW1C-like glycosyltransferase; N-glycosylation; 2 98.71
2o6l_A170 UDP-glucuronosyltransferase 2B7; drug metabolism, 98.64
1iir_A415 Glycosyltransferase GTFB; rossmann fold; 1.80A {Am 98.04
4gyw_A723 UDP-N-acetylglucosamine--peptide N- acetylglucosam 97.25
3hbm_A282 UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je 96.11
1psw_A348 ADP-heptose LPS heptosyltransferase II; structural 95.61
3hbf_A454 Flavonoid 3-O-glucosyltransferase; glycosyltransfe 94.66
2c1x_A456 UDP-glucose flavonoid 3-O glycosyltransferase; WIN 93.21
3l7i_A729 Teichoic acid biosynthesis protein F; GT-B fold, m 93.19
2acv_A463 Triterpene UDP-glucosyl transferase UGT71G1; glyco 93.04
2pq6_A482 UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl 92.77
2vch_A480 Hydroquinone glucosyltransferase; glycosyltransfer 92.53
3tov_A349 Glycosyl transferase family 9; structural genomics 92.45
2jzc_A224 UDP-N-acetylglucosamine transferase subunit ALG13; 90.43
2gt1_A326 Lipopolysaccharide heptosyltransferase-1; GT-B fol 88.94
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
Probab=100.00  E-value=8.9e-65  Score=572.38  Aligned_cols=486  Identities=41%  Similarity=0.689  Sum_probs=397.1

Q ss_pred             cccCCceeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeEEeecCCceE
Q 006091          146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQE  225 (662)
Q Consensus       146 ~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  225 (662)
                      ...+..|||+||++|++|+.++||++.++..|+++|+++||+|.||+|.|+....       ..+......+.+.++...
T Consensus         4 ~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~-------~~~~~~~~~~~~~~~~~~   76 (536)
T 3vue_A            4 HHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKD-------AWDTSVVAEIKVADRYER   76 (536)
T ss_dssp             ----CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTT-------CEEEEEEEEEEETTEEEE
T ss_pred             ccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhh-------hcccceEEEEEecCceEE
Confidence            4566789999999999999999999999999999999999999999999976432       223334456667777778


Q ss_pred             EEEEEEeeCCceEEEEeCCCCCCC------CCCCCCCC-CCCCchhHHHHHHHHHHhhhccccCCC-----CCCCCCccE
Q 006091          226 IAFFHEYREGVDWVFVDHPSYHRP------GNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLG-----GFTYGEKCI  293 (662)
Q Consensus       226 ~~~~~~~~~gv~v~~i~~~~~~~~------~~~y~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~-----~f~~~~pDV  293 (662)
                      +.++....+|+++++++++.|..+      ..+|++.. .+|.|+..+|..|+++++++...+.+.     ....+.+||
T Consensus        77 ~~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddI  156 (536)
T 3vue_A           77 VRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVV  156 (536)
T ss_dssp             EEEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEE
T ss_pred             EEEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEE
Confidence            888888899999999999887654      34566543 478999999999999998876554321     122346789


Q ss_pred             EEeCCCCcchHHHHHHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhh
Q 006091          294 FLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAV  373 (662)
Q Consensus       294 Vh~h~~~~~l~~~ll~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (662)
                      +|||+|++++++.+++......+.+.++|+|+|+|++.+++.++...+...+++..+.......    .......+...+
T Consensus       157 iH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  232 (536)
T 3vue_A          157 FVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFI----DGYDTPVEGRKI  232 (536)
T ss_dssp             EEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEE----ETTTSTTCEEEE
T ss_pred             EEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhh----hcccccccccch
Confidence            9999999999999999888766677899999999999999999888887777766554322111    111122345668


Q ss_pred             hHHHHHHHhcCEEEecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccc-cchhHHh
Q 006091          374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD-LSGKVQC  452 (662)
Q Consensus       374 ~~~k~~~~~ad~ii~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~-~~~~~~~  452 (662)
                      ++++.++..||.|++||+.+++++.+.. +.|+.-....+..++.+|+||||++.|.|..+..+..++.... +.+|..+
T Consensus       233 n~~k~~i~~ad~v~tVS~~~a~ei~~~~-~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~  311 (536)
T 3vue_A          233 NWMKAGILEADRVLTVSPYYAEELISGI-ARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALN  311 (536)
T ss_dssp             EHHHHHHHHCSEEEESCHHHHHHHHTTC-CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHH
T ss_pred             hHHHHHHHhccEEEEcCHHHhhhhhccc-ccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHH
Confidence            9999999999999999999999987642 2222222234567899999999999999999888888887655 5789999


Q ss_pred             HHHHHHHhCCCCCCCCCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCC
Q 006091          453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN  532 (662)
Q Consensus       453 k~~~r~~lgl~~~~~~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~  532 (662)
                      |..+++++|++.+++.|+|+|+||+.++||++.|++|++++.+++++|+++|.|++.....++........++.....++
T Consensus       312 k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~  391 (536)
T 3vue_A          312 KEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFN  391 (536)
T ss_dssp             HHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCC
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEecc
Confidence            99999999999888999999999999999999999999999888999999999987777777777777777888788788


Q ss_pred             hHHHHHHHHhcCEEEEcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceE----------EECC
Q 006091          533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW----------SFLP  602 (662)
Q Consensus       533 ~~~~~~ll~~aDi~v~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~----------l~~~  602 (662)
                      .++...+|+.||++|+||++|+||++++|||+||+|||+|++||++|+|.+          +.||+          +|++
T Consensus       392 ~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~d----------g~~G~~~~~~~~~g~l~~~  461 (536)
T 3vue_A          392 APLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIE----------GKTGFHMGRLSVDCKVVEP  461 (536)
T ss_dssp             HHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCB----------TTTEEECCCCCSCTTCCCH
T ss_pred             HHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeC----------CCCccccccCCCceeEECC
Confidence            888889999999999999999999999999999999999999999999999          88888          6778


Q ss_pred             CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Q 006091          603 LSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWAS  655 (662)
Q Consensus       603 ~d~~~la~aI~~~l~~~~~~~~~~~~l~~~~~~~~fs~e~~a~~~~~iy~~~~  655 (662)
                      .|+++|+++|.+++..+  +++.|++++++++.++|||++++++|+++|+++.
T Consensus       462 ~d~~~la~ai~ral~~~--~~~~~~~~~~~am~~~fSW~~~A~~y~~ly~~L~  512 (536)
T 3vue_A          462 SDVKKVAATLKRAIKVV--GTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG  512 (536)
T ss_dssp             HHHHHHHHHHHHHHHHT--TSHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence            88999999999999866  3456899999999999999999999999999863
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} Back     alignment and structure
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* Back     alignment and structure
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* Back     alignment and structure
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A Back     alignment and structure
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Back     alignment and structure
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* Back     alignment and structure
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* Back     alignment and structure
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 Back     alignment and structure
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* Back     alignment and structure
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Back     alignment and structure
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Back     alignment and structure
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Back     alignment and structure
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} Back     alignment and structure
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Back     alignment and structure
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 662
d1rzua_477 c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte 1e-101
d2bisa1437 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro 3e-43
d2bfwa1196 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py 4e-12
d2f9fa1166 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ 0.004
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  315 bits (806), Expect = e-101
 Identities = 172/504 (34%), Positives = 246/504 (48%), Gaps = 32/504 (6%)

Query: 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG 212
           N++ V++E  P  KTGGL DV G+LP+AL A G R   + P Y              D  
Sbjct: 2   NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY------PAVKAAVTDPV 55

Query: 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY-HRPGNPYGDING-AFGDNQFRYTLL 270
            C +     GE +        E +D + +D P+Y  R G PY    G  + DN  R+  L
Sbjct: 56  KCFEFTDLLGE-KADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAAL 114

Query: 271 CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNL 330
             AA      +  G        +   +DW A + PV +     P        S+L IHN+
Sbjct: 115 SLAAARIGAGVLPGW----RPDMVHAHDWQAAMTPVYMRYAETPE-----IPSLLTIHNI 165

Query: 331 SHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390
           + QG   A  +  L LP+  +G     +              V+ LKG + TA  L TVS
Sbjct: 166 AFQGQFGANIFSKLALPAHAFGMEGIEYY-----------NDVSFLKGGLQTATALSTVS 214

Query: 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKV 450
             Y+ EI T E G GL  ++ SR  VL+GI NGID   WNP++D  I  +YS  +L  + 
Sbjct: 215 PSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRA 274

Query: 451 QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQF 510
             K A+ +   +      PL   I RL +QKGIDL+  A  EI++   + V+LG+GD   
Sbjct: 275 LNKKAVAEHFRID-DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVAL 333

Query: 511 ESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPV 570
           E  +    + +  +    +G+N P+SH + AGCD +++PSRFEPCGL QLYA+RYG IPV
Sbjct: 334 EGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV 393

Query: 571 VHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 630
           V  TGGL DTV + N  A       TG  F P++ + +  A+R  +R Y      W  + 
Sbjct: 394 VARTGGLADTVIDANHAALASKA-ATGVQFSPVTLDGLKQAIRRTVRYYH-DPKLWTQMQ 451

Query: 631 RRGMEKDYTWENAAIQYEQVFEWA 654
           + GM+ D +WE +A  Y  ++   
Sbjct: 452 KLGMKSDVSWEKSAGLYAALYSQL 475
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Length = 166 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query662
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 100.0
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 100.0
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 100.0
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.93
d1uqta_456 Trehalose-6-phosphate synthase, OtsA {Escherichia 99.91
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 99.84
d1l5wa_796 Maltodextrin phosphorylase (MALP) {Escherichia col 99.53
d2gj4a1824 Glycogen phosphorylase {Rabbit (Oryctolagus cunicu 99.45
d1ygpa_876 Glycogen phosphorylase {Baker's yeast (Saccharomyc 98.87
d1pn3a_391 TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi 98.74
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 98.69
d1rrva_401 TDP-vancosaminyltransferase GftD {Amycolatopsis or 98.67
d1iira_401 UDP-glucosyltransferase GtfB {Amycolatopsis orient 98.35
d2acva1461 Triterpene UDP-glucosyl transferase UGT71G1 {Medic 97.76
d1v4va_373 UDP-N-acetylglucosamine 2-epimerase {Thermus therm 97.53
d2c1xa1450 UDP glucose:flavonoid 3-o-glucosyltransferase {Gra 97.33
d1o6ca_377 UDP-N-acetylglucosamine 2-epimerase {Bacillus subt 97.21
d2vcha1471 Hydroquinone glucosyltransferase {Thale cress (Ara 97.01
d1f6da_376 UDP-N-acetylglucosamine 2-epimerase {Escherichia c 95.96
d2pq6a1473 (Iso)flavonoid glycosyltransferase {Medicago trunc 91.26
d1pswa_348 ADP-heptose LPS heptosyltransferase II {Escherichi 90.06
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.6e-57  Score=501.72  Aligned_cols=473  Identities=36%  Similarity=0.569  Sum_probs=372.9

Q ss_pred             eeEEEEeecccCccccCcHHHHHhhHHHHHHhCCCcEEEEeecCCCCCCcccchhhhcccCceeE-Eee-cCCceEEEEE
Q 006091          152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMK-ICC-FGGEQEIAFF  229 (662)
Q Consensus       152 MkIl~vs~~~~P~~~~GG~~~~~~~La~~L~~~GheV~Vit~~~~~~~~~~~~~~~~~~~~~~~~-v~~-~~~~~~~~~~  229 (662)
                      |||++|+.+++|+.++||+++++.+|+++|+++||+|+||||.|+..+.       .  ...... ... .........+
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~   71 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKA-------A--VTDPVKCFEFTDLLGEKADLL   71 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHH-------H--CCSCEEEEEESCSSSCCEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhh-------h--cccceEEEEEeccCCceEEEE
Confidence            9999999999998789999999999999999999999999998753211       0  111111 111 1223345566


Q ss_pred             EEeeCCceEEEEeCCCC-CCCCCCCCCCC-CCCCchhHHHHHHHHHHhhhccccCCCCCCCCCccEEEeCCCCcchHHHH
Q 006091          230 HEYREGVDWVFVDHPSY-HRPGNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL  307 (662)
Q Consensus       230 ~~~~~gv~v~~i~~~~~-~~~~~~y~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~f~~~~pDVVh~h~~~~~l~~~l  307 (662)
                      ....+++++++++++.| .+.+.++.... ..|.++...+..++.++.+...... .+   .+|||||+|+|++++.+.+
T Consensus        72 ~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~pDIvH~h~~~~~l~~~~  147 (477)
T d1rzua_          72 EVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVL-PG---WRPDMVHAHDWQAAMTPVY  147 (477)
T ss_dssp             EEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCS-SS---CCCSEEEEEHHHHTTHHHH
T ss_pred             EEEECCeeEEEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcc-cC---CCCCEEEecchhHHHHHHH
Confidence            77789999999998764 33344444433 4678889899888888776654432 23   3799999999999998888


Q ss_pred             HHhhcCCCCCCCCCcEEEEecCCCCCCCCChhhhhhcCCChhhhccccccccccccccccCcchhhhHHHHHHHhcCEEE
Q 006091          308 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL  387 (662)
Q Consensus       308 l~~~~~~~~~~~gip~v~tiH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ii  387 (662)
                      ++....     .++|+|+|+|+..+...++...+..++.+..++...           ...+.....+++..+..+|.++
T Consensus       148 ~~~~~~-----~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ad~~~  211 (477)
T d1rzua_         148 MRYAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGME-----------GIEYYNDVSFLKGGLQTATALS  211 (477)
T ss_dssp             HHHSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTT-----------TTEETTEEEHHHHHHHHCSEEE
T ss_pred             HHHhhC-----CCCCEEEEEecccccccCCHHHHHHhhcchhhcccc-----------cccccchhHHHHHHHHhhhhhh
Confidence            876553     689999999998777666666555555544333221           1122445677888899999999


Q ss_pred             ecCcchhhhhhcccCCcchhhhhccCCCceeEecCCCCCCCCCCCCchhhcccCcccccchhHHhHHHHHHHhCCCCCCC
Q 006091          388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD  467 (662)
Q Consensus       388 ~vS~~~~~~i~~~~~~~~l~~~~~~~~~ki~vIpnGvd~~~~~~~~~~~i~~~~~~~~~~~~~~~k~~~r~~lgl~~~~~  467 (662)
                      ++|..+.+++.....+.+..........++.+|+||+|.+.|.|.....+..+...+....+..++..++.+.+++. ++
T Consensus       212 ~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  290 (477)
T d1rzua_         212 TVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD-DG  290 (477)
T ss_dssp             ESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCC-SS
T ss_pred             hccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhccccc-CC
Confidence            99999988776554444444455566778999999999999999888777777777777788888889999999872 46


Q ss_pred             CCEEEEEecCCCccCHHHHHHHHHhccCCCeEEEEEeCCChhhHHHHHHHHhhcCCcEEEEcCCChHHHHHHHHhcCEEE
Q 006091          468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL  547 (662)
Q Consensus       468 ~~~Il~vGrl~~~Kg~d~Ll~A~~~l~~~d~~lvivG~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ll~~aDi~v  547 (662)
                      .++|+|+||+.++||++.|++|++++.+.+++|+++|.|++.....+..+......++....++++++...+|++||++|
T Consensus       291 ~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v  370 (477)
T d1rzua_         291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAII  370 (477)
T ss_dssp             SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred             ccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCcccc
Confidence            78999999999999999999999998888999999999987666666667777777777777778888888999999999


Q ss_pred             EcCCCCCCcHHHHHHHHcCCcEEEeCCcccccccccccccccCCCCccceEEECCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 006091          548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE  627 (662)
Q Consensus       548 ~PS~~E~fgl~~lEAma~G~PvVas~~gg~~eii~~~~~~~~~~~~~~~G~l~~~~d~~~la~aI~~~l~~~~~~~~~~~  627 (662)
                      +||.+|+||++++||||||+|||+|++||++|+|.+..... .-..+.+|++|++.|+++|+++|.++++.+ +|+++|+
T Consensus       371 ~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~-~~~~~~~G~l~~~~d~~~la~ai~~~l~~~-~~~~~~~  448 (477)
T d1rzua_         371 IPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAA-LASKAATGVQFSPVTLDGLKQAIRRTVRYY-HDPKLWT  448 (477)
T ss_dssp             ECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHH-HHTTCCCBEEESSCSHHHHHHHHHHHHHHH-TCHHHHH
T ss_pred             CCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccc-cccCCCceEEeCCCCHHHHHHHHHHHHhhh-CCHHHHH
Confidence            99999999999999999999999999999999998710000 000134999999999999999999998755 6899999


Q ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 006091          628 GLMRRGMEKDYTWENAAIQYEQVFEWASI  656 (662)
Q Consensus       628 ~l~~~~~~~~fs~e~~a~~~~~iy~~~~~  656 (662)
                      +|++++++++|||++++++|+++|++++.
T Consensus       449 ~~~~~a~~~~fsw~~~a~~~~~lY~~ll~  477 (477)
T d1rzua_         449 QMQKLGMKSDVSWEKSAGLYAALYSQLIS  477 (477)
T ss_dssp             HHHHHHHTCCCBHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhhCCHHHHHHHHHHHHHHHhC
Confidence            99999998899999999999999999873
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Back     information, alignment and structure
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Back     information, alignment and structure
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure