Citrus Sinensis ID: 006141

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------66
MEPNSSSNDNNKMQLQHHSSCLEIAAMEVHRVVPPPHKSTIEKLKRRLKETFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASLSSTIKAPSANYV
cccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccEEEEEEcccEEEccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccccccccccccEEccHHHHHHHHHHHccccccccc
cccccccccccccccccccccccccccccEEccccccccHHHHHHHHHHccccccccHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccEEEEEcccccHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcHHHcccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccHcccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccEEEEcHHHcccccccccEEEEEEcccEHHccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccHHHHcccccEEEEHHHHHHHHHHHHHccccccc
mepnsssndnnkmqlQHHSSCLEIAAMevhrvvppphksTIEKLKRRLKetffpddplrqfkgqplgkKWILAAQYIFpilewgpnysfklfksdiisgltiaslaipqgisyaklanlppivglyssfvpplvytvlgssrdlavgpVSIASLIMGSmlrqevsptqnpVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGithftnqmglipvmssvfhntkewsWQTILMGFCFLVFLLLTrhvgtkrpklfwvsagAPLVSVILSTLLVFAFKAQHHGISVIGKlqeglnppswnmlkfhgshlglvMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSstscyittgafsrsavnhnagaktAVSNVVMSVTVMVTLLFLmplfqytpnVVLGAIIVTAVVGLidvpaahqiwkidKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQItrpktvmlgnmpgsdiyrdlhhyneairipgflilSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAvsaidtsgTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQrsddsgdfkrpdslyLTVGEAVASLSstikapsanyv
mepnsssndnnkmQLQHHSSCLEIAAMEVHRVVPPPHKSTIEKLKRRLKETffpddplrqfkgqplgkKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEklqrsddsgdfkrpdSLYLTVGEAvaslsstikapsanyv
MEPNSSSNDNNKMQLQHHSSCLEIAAMEVHRVVPPPHKSTIEKLKRRLKETFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVlflqlaftatffGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAvsnvvmsvtvmvtllFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASLSSTIKAPSANYV
********************CLEIAAMEVHRV*****************ETFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLE****************LYLTVG******************
**************************************************TFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASL************
***************QHHSSCLEIAAMEVHRVVPPPHKSTIEKLKRRLKETFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASLSSTIKAPSANYV
***************************EVHRVVPPPHKSTIEKLKRRLKETFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASLSSTIKA******
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MEPNSSSNDNNKMQLQHHSSCLEIAAMEVHRVVPPPHKSTIEKLKRRLKETFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASLSSTIKAPSANYV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query659 2.2.26 [Sep-21-2011]
Q9SXS2631 Probable sulfate transpor yes no 0.957 1.0 0.786 0.0
Q9LW86653 Probable sulfate transpor no no 0.949 0.958 0.657 0.0
Q9SV13658 Sulfate transporter 3.1 O no no 0.946 0.948 0.581 0.0
P53392662 High affinity sulfate tra N/A no 0.934 0.930 0.515 0.0
P53391667 High affinity sulfate tra N/A no 0.966 0.955 0.507 0.0
O04289646 Sulfate transporter 3.2 O no no 0.940 0.959 0.541 0.0
Q9SAY1649 Sulfate transporter 1.1 O no no 0.937 0.952 0.515 0.0
Q9FEP7656 Sulfate transporter 1.3 O no no 0.971 0.975 0.509 0.0
Q9MAX3653 Sulfate transporter 1.2 O no no 0.934 0.943 0.519 1e-180
Q94LW6634 Probable sulfate transpor no no 0.898 0.933 0.479 1e-168
>sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2 Back     alignment and function desciption
 Score = 1025 bits (2650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/633 (78%), Positives = 565/633 (89%), Gaps = 2/633 (0%)

Query: 27  MEVHRVVPPPHKSTIEKLKRRLKETFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPN 86
           MEVH+VV PPHKST+ KLK +LKETFFPDDPLRQF+GQP   K I AAQYIFPIL+W P 
Sbjct: 1   MEVHKVVAPPHKSTVAKLKTKLKETFFPDDPLRQFRGQPNRTKLIRAAQYIFPILQWCPE 60

Query: 87  YSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAV 146
           YSF L KSD++SGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVY VLGSSRDLAV
Sbjct: 61  YSFSLLKSDVVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAV 120

Query: 147 GPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGFIIDFLSKA 206
           GPVSIASLI+GSMLRQ+VSP  +PVLFLQLAF++TFF GL QASLG+LRLGFIIDFLSKA
Sbjct: 121 GPVSIASLILGSMLRQQVSPVDDPVLFLQLAFSSTFFAGLFQASLGILRLGFIIDFLSKA 180

Query: 207 TLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLV 266
           TLIGFM GAAIIVSLQQLK LLGITHFT  M ++PV+SSVF +T EWSWQTI+MG CFL+
Sbjct: 181 TLIGFMGGAAIIVSLQQLKGLLGITHFTKHMSVVPVLSSVFQHTNEWSWQTIVMGVCFLL 240

Query: 267 FLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWN 326
           FLL TRH+  K+PKLFWVSAGAPL+SVI+STLLVF F+A+ HGISVIGKL EGLNPPSWN
Sbjct: 241 FLLSTRHLSMKKPKLFWVSAGAPLLSVIVSTLLVFVFRAERHGISVIGKLPEGLNPPSWN 300

Query: 327 MLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSS 386
           ML+FHGSHL LV KTGL+TGI+SLTEGIAVGRTFAALKNY VDGNKEMIAIG+MN+VGS+
Sbjct: 301 MLQFHGSHLALVAKTGLVTGIVSLTEGIAVGRTFAALKNYHVDGNKEMIAIGLMNVVGSA 360

Query: 387 TSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTA 446
           TSCY+TTGAFSRSAVN+NAGAKTAVSN+VMSVTVMVTLLFLMPLF+YTPNVVLGAIIVTA
Sbjct: 361 TSCYVTTGAFSRSAVNNNAGAKTAVSNIVMSVTVMVTLLFLMPLFEYTPNVVLGAIIVTA 420

Query: 447 VVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKT 506
           V+GLID+PAA  IWKIDKFDFLVMLCAF GV+F+SVQ GLAIAVG+S+FKIL+Q+TRPK 
Sbjct: 421 VIGLIDLPAACHIWKIDKFDFLVMLCAFFGVIFLSVQNGLAIAVGLSLFKILMQVTRPKM 480

Query: 507 VMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEEN 566
           V++GN+PG+DIYRDLHHY EA RIPGFL+LSIE+P+NFAN+ YL ER  RWIEE E EE 
Sbjct: 481 VIMGNIPGTDIYRDLHHYKEAQRIPGFLVLSIESPVNFANSNYLTERTSRWIEECEEEEA 540

Query: 567 LNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDD 626
             K SSL+F+ILEMSAVS +DT+G SFFK+L+K   KK +ELV VNPL+EV+EKLQR+D+
Sbjct: 541 QEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLSEVVEKLQRADE 600

Query: 627 SGDFKRPDSLYLTVGEAVASLSSTIKAPSANYV 659
             +F RP+ L+LTV EAVASLS  +K PS + V
Sbjct: 601 QKEFMRPEFLFLTVAEAVASLS--LKGPSLSNV 631
H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1 Back     alignment and function description
>sp|P53392|SUT2_STYHA High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1 Back     alignment and function description
>sp|P53391|SUT1_STYHA High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1 Back     alignment and function description
>sp|O04289|SUT32_ARATH Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAY1|SUT11_ARATH Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2 Back     alignment and function description
>sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAX3|SUT12_ARATH Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1 Back     alignment and function description
>sp|Q94LW6|SUT35_ARATH Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query659
224108317652 sulfate/bicarbonate/oxalate exchanger an 0.989 1.0 0.833 0.0
255570132652 sulfate transporter, putative [Ricinus c 0.989 1.0 0.810 0.0
194293439652 sulfate transporter [Populus tremula x P 0.989 1.0 0.831 0.0
225424240652 PREDICTED: probable sulfate transporter 0.981 0.992 0.804 0.0
297737696636 unnamed protein product [Vitis vinifera] 0.957 0.992 0.821 0.0
224101849631 sulfate/bicarbonate/oxalate exchanger an 0.957 1.0 0.845 0.0
117557142620 sulfate transporter, partial [Populus tr 0.940 1.0 0.835 0.0
356521546659 PREDICTED: probable sulfate transporter 0.981 0.981 0.806 0.0
356575898658 PREDICTED: probable sulfate transporter 0.966 0.968 0.814 0.0
147801553653 hypothetical protein VITISV_036877 [Viti 0.928 0.937 0.786 0.0
>gi|224108317|ref|XP_002314803.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222863843|gb|EEF00974.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1142 bits (2953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 549/659 (83%), Positives = 609/659 (92%), Gaps = 7/659 (1%)

Query: 1   MEPNSSSNDNNKMQLQHHSSCLEIAAMEVHRVVPPPHKSTIEKLKRRLKETFFPDDPLRQ 60
           MEPN+S    N +Q  H   CLEI  MEVH+VVPPPH+STI+KLK RLKETFFPDDPLRQ
Sbjct: 1   MEPNAS----NSLQPDH---CLEITPMEVHKVVPPPHRSTIQKLKSRLKETFFPDDPLRQ 53

Query: 61  FKGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLP 120
           FKGQPLGKKWILAA+Y FPIL+WGPNYSFKLFKSDI+SGLTIASLAIPQGISYAKLA+LP
Sbjct: 54  FKGQPLGKKWILAAKYFFPILQWGPNYSFKLFKSDIVSGLTIASLAIPQGISYAKLASLP 113

Query: 121 PIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTA 180
           PIVGLYSSFVPPLVY VLGSSRDLAVGPVSIASLI+GSML+QEVSPT +P+LFLQLAF++
Sbjct: 114 PIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLKQEVSPTNDPLLFLQLAFSS 173

Query: 181 TFFGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLI 240
           TFF GL QASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFT QM L+
Sbjct: 174 TFFAGLFQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTKQMELV 233

Query: 241 PVMSSVFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLV 300
           PV+SSVFHNT EWSWQT+LMGFCFLVFLLL RHV  K+PKLFWVSAGAPLVSVILST+LV
Sbjct: 234 PVLSSVFHNTNEWSWQTVLMGFCFLVFLLLARHVSMKKPKLFWVSAGAPLVSVILSTVLV 293

Query: 301 FAFKAQHHGISVIGKLQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTF 360
           FAFKAQ HGISVIGKLQEGLNPPSWNML FHGS+LGLV+KTGL+TGIISLTEGIAVGRTF
Sbjct: 294 FAFKAQRHGISVIGKLQEGLNPPSWNMLHFHGSYLGLVVKTGLVTGIISLTEGIAVGRTF 353

Query: 361 AALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTV 420
           AALKNYQVDGNKEM+AIG+MN++GS+TSCY+TTGAFSRSAVNHNAGAKTAVSN++MSVTV
Sbjct: 354 AALKNYQVDGNKEMMAIGLMNVIGSATSCYVTTGAFSRSAVNHNAGAKTAVSNIIMSVTV 413

Query: 421 MVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFI 480
           MVTLLFLMPLFQYTPNVVLGAIIVTAV+GLID+PAA QIWKIDKFDF+VMLCAF GV+ +
Sbjct: 414 MVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACQIWKIDKFDFVVMLCAFFGVILV 473

Query: 481 SVQEGLAIAVGISIFKILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEA 540
           SVQ+GLAIAVGISIFKILLQ+TRPKTV+LGN+PG+DI+R+LHHY EA+RIPGFLILSIEA
Sbjct: 474 SVQDGLAIAVGISIFKILLQVTRPKTVVLGNIPGTDIFRNLHHYKEAMRIPGFLILSIEA 533

Query: 541 PINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKA 600
           PINFANTTYL ERILRWI+EYE EE+  +QSS+ F+IL++SAVS+IDTSG S  KDL+KA
Sbjct: 534 PINFANTTYLKERILRWIDEYETEEDTKRQSSIHFLILDLSAVSSIDTSGVSLLKDLKKA 593

Query: 601 MEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASLSSTIKAPSANYV 659
           +E  G ELVLVNP  EVLEKLQR+DD  D   PD+LYLTVGEAVA+LSST+K  S+N+V
Sbjct: 594 LENTGAELVLVNPGGEVLEKLQRADDVRDVMSPDALYLTVGEAVAALSSTMKGRSSNHV 652

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255570132|ref|XP_002526028.1| sulfate transporter, putative [Ricinus communis] gi|223534675|gb|EEF36368.1| sulfate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|194293439|gb|ABK35746.2| sulfate transporter [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|225424240|ref|XP_002280766.1| PREDICTED: probable sulfate transporter 3.3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297737696|emb|CBI26897.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224101849|ref|XP_002312444.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222852264|gb|EEE89811.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|117557142|gb|ABK35748.1| sulfate transporter, partial [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|356521546|ref|XP_003529415.1| PREDICTED: probable sulfate transporter 3.3-like [Glycine max] Back     alignment and taxonomy information
>gi|356575898|ref|XP_003556073.1| PREDICTED: probable sulfate transporter 3.3-like [Glycine max] Back     alignment and taxonomy information
>gi|147801553|emb|CAN77009.1| hypothetical protein VITISV_036877 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query659
TAIR|locus:2201220631 AST91 "sulfate transporter 91" 0.957 1.0 0.748 8.5e-255
TAIR|locus:2093452653 SULTR3;4 "sulfate transporter 0.949 0.958 0.626 3.2e-207
TAIR|locus:3437527658 SULTR3;1 "AT3G51895" [Arabidop 0.939 0.940 0.554 2.1e-180
TAIR|locus:2132333646 SULTR3;2 "sulfate transporter 0.940 0.959 0.508 2.2e-167
TAIR|locus:2030606656 SULTR1;3 "sulfate transporter 0.971 0.975 0.482 4.8e-165
TAIR|locus:2029396653 SULTR1;2 "sulfate transporter 0.931 0.940 0.491 4.3e-164
TAIR|locus:2138561649 SULTR1;1 "sulphate transporter 0.940 0.955 0.491 4.5e-162
TAIR|locus:2183139634 SULTR3;5 "sulfate transporter 0.895 0.930 0.457 9.3e-146
TAIR|locus:2184158677 SULTR2;1 "sulfate transporter 0.919 0.895 0.450 8e-140
TAIR|locus:2029496677 AST56 [Arabidopsis thaliana (t 0.857 0.834 0.460 2e-136
TAIR|locus:2201220 AST91 "sulfate transporter 91" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2453 (868.6 bits), Expect = 8.5e-255, P = 8.5e-255
 Identities = 474/633 (74%), Positives = 538/633 (84%)

Query:    27 MEVHRVVPPPHKSTIEKLKRRLKETFFPDDPLRQFKGQPLGKKWILAAQYIFPILEWGPN 86
             MEVH+VV PPHKST+ KLK +LKETFFPDDPLRQF+GQP   K I AAQYIFPIL+W P 
Sbjct:     1 MEVHKVVAPPHKSTVAKLKTKLKETFFPDDPLRQFRGQPNRTKLIRAAQYIFPILQWCPE 60

Query:    87 YSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAV 146
             YSF L KSD++SGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVY VLGSSRDLAV
Sbjct:    61 YSFSLLKSDVVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAV 120

Query:   147 GPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKA 206
             GPVSIASLI+GSMLRQ+VSP  +PV             GL QASLG+LRLGFIIDFLSKA
Sbjct:   121 GPVSIASLILGSMLRQQVSPVDDPVLFLQLAFSSTFFAGLFQASLGILRLGFIIDFLSKA 180

Query:   207 TLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVFHNTKEWSWQTILMGFCFLV 266
             TLIGFM GAAIIVSLQQLK LLGITHFT  M ++PV+SSVF +T EWSWQTI+MG CFL+
Sbjct:   181 TLIGFMGGAAIIVSLQQLKGLLGITHFTKHMSVVPVLSSVFQHTNEWSWQTIVMGVCFLL 240

Query:   267 FLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQEGLNPPSWN 326
             FLL TRH+  K+PKLFWVSAGAPL+SVI+STLLVF F+A+ HGISVIGKL EGLNPPSWN
Sbjct:   241 FLLSTRHLSMKKPKLFWVSAGAPLLSVIVSTLLVFVFRAERHGISVIGKLPEGLNPPSWN 300

Query:   327 MLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSS 386
             ML+FHGSHL LV KTGL+TGI+SLTEGIAVGRTFAALKNY VDGNKEMIAIG+MN+VGS+
Sbjct:   301 MLQFHGSHLALVAKTGLVTGIVSLTEGIAVGRTFAALKNYHVDGNKEMIAIGLMNVVGSA 360

Query:   387 TSCYITTGAFSRSAVNHNAGAKTAXXXXXXXXXXXXXXXFLMPLFQYTPNVVLGAIIVTA 446
             TSCY+TTGAFSRSAVN+NAGAKTA               FLMPLF+YTPNVVLGAIIVTA
Sbjct:   361 TSCYVTTGAFSRSAVNNNAGAKTAVSNIVMSVTVMVTLLFLMPLFEYTPNVVLGAIIVTA 420

Query:   447 VVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKILLQITRPKT 506
             V+GLID+PAA  IWKIDKFDFLVMLCAF GV+F+SVQ GLAIAVG+S+FKIL+Q+TRPK 
Sbjct:   421 VIGLIDLPAACHIWKIDKFDFLVMLCAFFGVIFLSVQNGLAIAVGLSLFKILMQVTRPKM 480

Query:   507 VMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEAEEN 566
             V++GN+PG+DIYRDLHHY EA RIPGFL+LSIE+P+NFAN+ YL ER  RWIEE E EE 
Sbjct:   481 VIMGNIPGTDIYRDLHHYKEAQRIPGFLVLSIESPVNFANSNYLTERTSRWIEECEEEEA 540

Query:   567 LNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDD 626
               K SSL+F+ILEMSAVS +DT+G SFFK+L+K   KK +ELV VNPL+EV+EKLQR+D+
Sbjct:   541 QEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLSEVVEKLQRADE 600

Query:   627 SGDFKRPDSLYLTVGEAVASLSSTIKAPSANYV 659
               +F RP+ L+LTV EAVASLS  +K PS + V
Sbjct:   601 QKEFMRPEFLFLTVAEAVASLS--LKGPSLSNV 631
GO:0005215 "transporter activity" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0008271 "secondary active sulfate transmembrane transporter activity" evidence=IEA
GO:0008272 "sulfate transport" evidence=IEA
GO:0015116 "sulfate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2093452 SULTR3;4 "sulfate transporter 3;4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:3437527 SULTR3;1 "AT3G51895" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132333 SULTR3;2 "sulfate transporter 3;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030606 SULTR1;3 "sulfate transporter 1;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029396 SULTR1;2 "sulfate transporter 1;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138561 SULTR1;1 "sulphate transporter 1;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183139 SULTR3;5 "sulfate transporter 3;5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184158 SULTR2;1 "sulfate transporter 2;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029496 AST56 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P53391SUT1_STYHANo assigned EC number0.50770.96660.9550N/Ano
P53392SUT2_STYHANo assigned EC number0.51530.93470.9305N/Ano
Q9SXS2SUT33_ARATHNo assigned EC number0.78670.95751.0yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_X6499
sulfate/bicarbonate/oxalate exchanger and transporter sat-1 (652 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query659
TIGR00815563 TIGR00815, sulP, high affinity sulphate transporte 0.0
COG0659554 COG0659, SUL1, Sulfate permease and related transp 1e-108
pfam00916279 pfam00916, Sulfate_transp, Sulfate transporter fam 1e-102
pfam1379283 pfam13792, Sulfate_tra_GLY, Sulfate transporter N- 1e-36
PRK11660568 PRK11660, PRK11660, putative transporter; Provisio 3e-31
pfam01740106 pfam01740, STAS, STAS domain 9e-22
cd07042107 cd07042, STAS_SulP_like_sulfate_transporter, Sulph 9e-21
cd0704399 cd07043, STAS_anti-anti-sigma_factors, Sulphate Tr 3e-05
COG1366117 COG1366, SpoIIAA, Anti-anti-sigma regulatory facto 4e-04
>gnl|CDD|162054 TIGR00815, sulP, high affinity sulphate transporter 1 Back     alignment and domain information 
 Score =  562 bits (1450), Expect = 0.0
 Identities = 235/568 (41%), Positives = 351/568 (61%), Gaps = 8/568 (1%)

Query: 79  PILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVL 138
           P+L W P+Y  K FK D+++GLT+  L IPQ ++YA LA L PI GLY+SFVPP +Y + 
Sbjct: 1   PVLRWLPHYRLKKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALF 60

Query: 139 GSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVLFLQLAFTATFFGGLVQASLGLLRLGF 198
           G+SRD+A+GPV++ SL++GS++ +           ++LAFT T   G+ Q  LGLLRLGF
Sbjct: 61  GTSRDIAIGPVAVMSLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGF 120

Query: 199 IIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSSVF---HNTKEWSW 255
           +I+FLS A + GFM GAAI + L QLK LLGI+ F  +   + V+ S +    NT  W+W
Sbjct: 121 LIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHNWNW 180

Query: 256 QTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGK 315
            T+++G   L+FLL T+ +G +  KL +  A APL+ VIL+TL V     +  G+S++G 
Sbjct: 181 CTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILGH 240

Query: 316 LQEGLNPPSWNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMI 375
           +  GL    +  +      L  +    +   I+ L E IA+ R+FA +  Y++D N+E++
Sbjct: 241 IPSGL--SFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQELV 298

Query: 376 AIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTP 435
           A G+ NIVGS  SCY  TG+ SR+AVN  AG +T +S VV ++ V++ LL L PLF Y P
Sbjct: 299 AQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIP 358

Query: 436 NVVLGAIIVTAVVGLIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIF 495
              L AII++AV GLID    +++WK DK DF+V L  F GVVF S++ GL + V +S  
Sbjct: 359 QAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSAA 418

Query: 496 KILLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERIL 555
            +LL+I RP+  +LG +PG+++YR +  Y  A   PG L+  ++ P+ FAN   L +R+L
Sbjct: 419 FLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGPLYFANAEDLKDRLL 478

Query: 556 RWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLA 615
           + IE+    E   ++  L+ VIL+MSAV  +DTSG    ++LRK ++ +G++L+L NP  
Sbjct: 479 KRIEDETRRE--LERPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANPNK 536

Query: 616 EVLEKLQRSDDSGDFKRPDSLYLTVGEA 643
            V   L+R          +  + +V +A
Sbjct: 537 AVRSTLKRGGLVELIGE-EHFFPSVSDA 563

The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out) [Transport and binding proteins, Anions]. Length = 563
>gnl|CDD|223732 COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216188 pfam00916, Sulfate_transp, Sulfate transporter family Back     alignment and domain information
>gnl|CDD|205965 pfam13792, Sulfate_tra_GLY, Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>gnl|CDD|183265 PRK11660, PRK11660, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|201948 pfam01740, STAS, STAS domain Back     alignment and domain information
>gnl|CDD|132913 cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>gnl|CDD|132914 cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>gnl|CDD|224285 COG1366, SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 659
KOG0236665 consensus Sulfate/bicarbonate/oxalate exchanger SA 100.0
TIGR00815563 sulP high affinity sulphate transporter 1. (2) SO4 100.0
COG0659554 SUL1 Sulfate permease and related transporters (MF 100.0
PRK11660568 putative transporter; Provisional 100.0
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 100.0
TIGR03173406 pbuX xanthine permease. All the seed members of th 99.96
PRK10720428 uracil transporter; Provisional 99.95
COG2252436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.95
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 99.95
PF1379284 Sulfate_tra_GLY: Sulfate transporter N-terminal do 99.92
TIGR03616429 RutG pyrimidine utilization transport protein G. T 99.91
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 99.87
PRK11412433 putative uracil/xanthine transporter; Provisional 99.87
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 99.85
PF01740117 STAS: STAS domain; InterPro: IPR002645 The STAS (S 99.76
TIGR02886106 spore_II_AA anti-sigma F factor antagonist. The an 99.68
cd07041109 STAS_RsbR_RsbS_like Sulphate Transporter and Anti- 99.67
TIGR00834900 ae anion exchange protein. They preferentially cat 99.61
TIGR00843395 benE benzoate transporter. The benzoate transporte 99.61
cd06844100 STAS Sulphate Transporter and Anti-Sigma factor an 99.6
KOG1172876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 99.51
TIGR00377108 ant_ant_sig anti-anti-sigma factor. This superfami 99.44
PF03594378 BenE: Benzoate membrane transport protein; InterPr 99.44
cd07042107 STAS_SulP_like_sulfate_transporter Sulphate Transp 99.43
cd0704399 STAS_anti-anti-sigma_factors Sulphate Transporter 99.29
COG1366117 SpoIIAA Anti-anti-sigma regulatory factor (antagon 99.24
PF00955510 HCO3_cotransp: HCO3- transporter family Only parti 99.09
KOG1292510 consensus Xanthine/uracil transporters [Nucleotide 99.07
PF1346680 STAS_2: STAS domain 99.04
COG3135402 BenE Uncharacterized protein involved in benzoate 98.87
PF11840492 DUF3360: Protein of unknown function (DUF3360); In 98.18
COG311399 Predicted NTP binding protein (contains STAS domai 97.54
TIGR00815 563 sulP high affinity sulphate transporter 1. (2) SO4 92.5
PF11964109 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 Th 91.8
PRK10720428 uracil transporter; Provisional 91.53
TIGR03173406 pbuX xanthine permease. All the seed members of th 90.25
PRK09928679 choline transport protein BetT; Provisional 90.25
PF13344101 Hydrolase_6: Haloacid dehalogenase-like hydrolase; 89.8
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 89.33
PF1421374 DUF4325: Domain of unknown function (DUF4325) 89.08
COG0659 554 SUL1 Sulfate permease and related transporters (MF 87.39
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 86.65
COG5439112 Uncharacterized conserved protein [Function unknow 81.97
KOG3040 262 consensus Predicted sugar phosphatase (HAD superfa 81.48
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=9.2e-110  Score=942.99  Aligned_cols=619  Identities=39%  Similarity=0.676  Sum_probs=549.9

Q ss_pred             eeecCCCCCchHHHHHHhhhhccCCCCccccccCCC--chhHHHHHhhhhccccCcCCCCCh-hhhhhhHHHHHHHHHHH
Q 006141           30 HRVVPPPHKSTIEKLKRRLKETFFPDDPLRQFKGQP--LGKKWILAAQYIFPILEWGPNYSF-KLFKSDIISGLTIASLA  106 (659)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~~~w~~~y~~-~~l~~Di~aGltv~~~~  106 (659)
                      +.++.|+.++..+..++..+++.+++++.++++++.  ++.++.+.+++++|+++|+|+|++ +|+.+|++||+|+|+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Pil~Wlp~Y~~~~~l~~DliaGltvg~l~   94 (665)
T KOG0236|consen   15 ASVDTPTFDSSNEEEKSSVENTPTRKDKSERFRNKQRCSSNKFLRSLLSLLPILEWLPKYSLKEWLLGDLIAGLTVGSLS   94 (665)
T ss_pred             ccccCCCCCcchhhhhccccCccccccHHHHhhccccccHHHHHHHHHhhccHhhhhhcCCchhhchHHHhcCceeeeee
Confidence            344455555555555555666555566666666554  456789999999999999999999 99999999999999999


Q ss_pred             HhhHHHHHHHhCCCcchhhhhhhhhhhhhhhccCCCccccchhhHHHHHHHHHHhhccCCCC---ChhhHHHHHHHHHHH
Q 006141          107 IPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQ---NPVLFLQLAFTATFF  183 (659)
Q Consensus       107 iPq~~aya~laglpp~~GLyss~v~~liy~~fGss~~~~~Gp~a~~sl~~~~~v~~~~~~~~---~~~~~~~~a~~~t~l  183 (659)
                      +||+||||.+||+||+|||||+|+|+++|++||+|||+++||+|++|+|+++++.+.+++..   ++..+++++.++||+
T Consensus        95 VPQ~iaYa~la~lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt~l  174 (665)
T KOG0236|consen   95 VPQGLAYALLAGLPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLTFL  174 (665)
T ss_pred             cchHHHHHHHcCCChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988887655433   456789999999999


Q ss_pred             HHHHHHHHHHhhhhhhhhhccHhHHHHHHHHHHHHHHHHhhHhHhCccccCCCCChHHHHH---HHHhhcCcchHHHHHH
Q 006141          184 GGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMS---SVFHNTKEWSWQTILM  260 (659)
Q Consensus       184 ~Gi~~~~lg~~rlg~l~~~lp~~vi~Gf~~gigl~i~~~ql~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i  260 (659)
                      +|++|++||+||||++++|+|+|++.||++|+|++++.+|+|.++|+++++.+.+....+.   +.+.+.++. +.++++
T Consensus       175 ~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  253 (665)
T KOG0236|consen  175 TGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKT-LATLVL  253 (665)
T ss_pred             HHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhccccc-chhhhh
Confidence            9999999999999999999999999999999999999999999999986666555544433   344444444 788999


Q ss_pred             HHHHHHHHHHHhh-hhccCCCccccccchhHHHHHHHHHHHHHhhccC-CCceeeeccccCCCCCCccccccchhhHHHH
Q 006141          261 GFCFLVFLLLTRH-VGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQH-HGISVIGKLQEGLNPPSWNMLKFHGSHLGLV  338 (659)
Q Consensus       261 g~~~l~~l~~~~~-~~~~~~~~~~i~~~~~li~vi~~t~i~~~~~~~~-~~v~~vg~ip~gl~~p~~~~~~~~~~~~~~~  338 (659)
                      +++++++++..|. ..++.++.+|+|+|.++++++++|+++|.++.+. +...+++++|+|+|+|++|.+++..    ..
T Consensus       254 ~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~~~~~~i~~g~~~~~lp~~~~~~----~~  329 (665)
T KOG0236|consen  254 SLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGRYGPIIVGEIPRGFPPPSLPPLSLTP----QV  329 (665)
T ss_pred             HHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccccCCeeeccCCCCCCCCCCCChhhhH----HH
Confidence            9999999999995 4444556666999999999999999999999876 4556667999999999999887654    56


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCcccCChhHHHHHhHhHhhhhccCcccccccchhhHHHhhcCCCchhhHHHHHH
Q 006141          339 MKTGLITGIISLTEGIAVGRTFAALKNYQVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSAVNHNAGAKTAVSNVVMSV  418 (659)
Q Consensus       339 ~~~~~~iaiv~~~e~~~~~~~~a~~~~~~~d~n~El~a~G~~Niv~s~fg~~p~~~s~srS~~~~~~G~~T~la~i~~a~  418 (659)
                      +..++.+++++++|+++++|+++++++|++|+||||+|+|++|++||||+|+|+|++++||++|.++|+|||++++++++
T Consensus       330 ~~~~~~i~iva~~~~iai~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~~~  409 (665)
T KOG0236|consen  330 IPDAFAIAIVALLEHIAIGKSFASLHGYKVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVSAA  409 (665)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHHHH
Confidence            66677899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhHHHhhhchhHHHHHHHHHHhh-cCChhHHHHHhcCCchhHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHH
Q 006141          419 TVMVTLLFLMPLFQYTPNVVLGAIIVTAVVG-LIDVPAAHQIWKIDKFDFLVMLCAFLGVVFISVQEGLAIAVGISIFKI  497 (659)
Q Consensus       419 ~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~-li~~~~~~~l~~~~~~d~~v~~~t~~~~~~~~~~~Gl~~gv~~s~~~~  497 (659)
                      ++++++++++|+|+|+|+|+||+|+++++.+ +++.++++.+||.+|.|+++|++|++++++.++++|+++|+++|++.+
T Consensus       410 ~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~lwr~~k~D~~~~~~t~~~~i~~~ve~Glligv~~s~~~i  489 (665)
T KOG0236|consen  410 LVLLALLFLGPLFYYIPKCVLAAIIISALIGMLIQLEDLKPLWRLSKIDLLIWVVTFFTTIFLSLEIGLLIGVAFSLFFI  489 (665)
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhhheeCCHHHHHHHHHHhheeeEehhhhhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999 569999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCceeeecccCCCcccccccccccccccCcEEEEEeccceEEecchHHHHHHH--HHHHHH---HhHhhhccCCC
Q 006141          498 LLQITRPKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERIL--RWIEEY---EAEENLNKQSS  572 (659)
Q Consensus       498 ~~~~~~p~~~~lg~~~~~~~~~~~~~~~~~~~~~~i~I~rl~g~L~F~na~~~~~~l~--~~i~~~---~~~~~~~~~~~  572 (659)
                      ++|++||+...+|++++++.|++.++|+++.+.++++|+|+++|++|.|.+.+++++.  +++++.   ++..++.+.++
T Consensus       490 i~~~~~p~~~~l~~~~~t~~~~~~~~y~~~~~~~gi~i~r~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  569 (665)
T KOG0236|consen  490 ILRSQRPRISLLGRIPRTNIYRDINQYRELKEIPGIKIFRISSPLLFGNVESFEKKLERLKYLRKEEVLENSARELHENS  569 (665)
T ss_pred             HHHhcCcchhhhcccCCCccccchhhcchhhccCceEEEEeccceeeccHHHHHHHHHHHHhhhhcccccCcccccccCc
Confidence            9999999999999999999999999999999999999999999999999999998873  454442   11111112224


Q ss_pred             ceEEEEEecCCCccChHHHHHHHHHHHHHHHcCCEEEEEcCChhHHHHHHhcCCCccccCCCccccCHHHHHHHHhhhhc
Q 006141          573 LRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASLSSTIK  652 (659)
Q Consensus       573 ~~~vILD~s~V~~IDssgi~~L~~l~~~~~~~gi~l~l~~~~~~v~~~L~~~g~~~~~~~~~~if~s~~~Av~~~~~~~~  652 (659)
                      .+++|+||++++++|++|+.+|+++.+++++++++++++|+++++++.|++++ +.+.++++++|+|++||++.|+.+.+
T Consensus       570 ~~~vild~s~v~~iD~~g~~~L~~l~~~~~~~~i~~~~~n~~~~v~~~l~~~~-~~~~~~~~~~f~tv~~av~~~~~~~~  648 (665)
T KOG0236|consen  570 IHSVILDCSGVSFIDTSGASALKSLFKDLKTRGVQVLLANCPSSVREKLSKAG-FFDFIGKDNLFLSVHDAVLDAVSELS  648 (665)
T ss_pred             ceEEEEECCccchhhHHHHHHHHHHHHHHHhcCcEEEEeCCCHHHHHHHHhhc-cccccchhhhhccHHHHHHHHHHhhh
Confidence            89999999999999999999999999999999999999999999999999999 77899999999999999999998776


Q ss_pred             cC
Q 006141          653 AP  654 (659)
Q Consensus       653 ~~  654 (659)
                      ..
T Consensus       649 ~~  650 (665)
T KOG0236|consen  649 RG  650 (665)
T ss_pred             cc
Confidence            43

>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists Back     alignment and domain information
>TIGR02886 spore_II_AA anti-sigma F factor antagonist Back     alignment and domain information
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00377 ant_ant_sig anti-anti-sigma factor Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells Back     alignment and domain information
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information
>PF13466 STAS_2: STAS domain Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only] Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PRK09928 choline transport protein BetT; Provisional Back     alignment and domain information
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>PF14213 DUF4325: Domain of unknown function (DUF4325) Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>COG5439 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query659
3llo_A143 Crystal Structure Of The Stas Domain Of Motor Prote 6e-08
>pdb|3LLO|A Chain A, Crystal Structure Of The Stas Domain Of Motor Protein Prestin (Anion Transporter Slc26a5) Length = 143 Back     alignment and structure 
Iteration: 1

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 504 PKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEA 563
           P   +LG +P +D+Y D+  Y E   IPG  I  I API +AN+   +  + R       
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKR------- 54
Query: 564 EENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKL 621
           +  +N   ++  VIL+ + V+ +D+ G      + K     G+ + L    A+V+  L
Sbjct: 55  KTGVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDL 112

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query659
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 3e-40
2kln_A130 Probable sulphate-transport transmembrane protein; 5e-32
4dgh_A130 Sulfate permease family protein; STAS domain, anio 3e-23
4dgf_A135 Sulfate transporter sulfate transporter family PR; 7e-21
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 3e-14
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 2e-04
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 2e-04
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 3e-04
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 4e-04
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 6e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 6e-04
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Length = 143 Back     alignment and structure
 Score =  142 bits (361), Expect = 3e-40
 Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 7/146 (4%)

Query: 504 PKTVMLGNMPGSDIYRDLHHYNEAIRIPGFLILSIEAPINFANTTYLNERILRWIEEYEA 563
           P   +LG +P +D+Y D+  Y E   IPG  I  I API +AN+   +  + R       
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKRKTGV--- 58

Query: 564 EENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELVLVNPLAEVLEKLQR 623
               N   ++  VIL+ + V+ +D+ G      + K     G+ + L    A+V+  L  
Sbjct: 59  ----NGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTS 114

Query: 624 SDDSGDFKRPDSLYLTVGEAVASLSS 649
           +    +    + L+ ++ +AV     
Sbjct: 115 NRFFENPALKELLFHSIHDAVLGSQV 140
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Length = 130 Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Length = 130 Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Length = 135 Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Length = 118 Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Length = 123 Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Length = 125 Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Length = 116 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Length = 110 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Length = 117 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query659
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 99.97
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 99.92
4dgh_A130 Sulfate permease family protein; STAS domain, anio 99.87
4dgf_A135 Sulfate transporter sulfate transporter family PR; 99.87
2kln_A130 Probable sulphate-transport transmembrane protein; 99.85
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 99.75
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 99.67
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 99.63
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 99.62
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 99.62
4hyl_A117 Stage II sporulation protein; structural genomics, 99.61
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 99.58
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 99.48
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 99.48
3agd_A456 Salt-tolerant glutaminase; glutaminase super famil 96.13
3bl4_A124 Uncharacterized protein; structural genomics, join 88.39
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 84.51
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=99.97  E-value=4.1e-29  Score=271.08  Aligned_cols=342  Identities=13%  Similarity=0.086  Sum_probs=257.2

Q ss_pred             hhhhHHHHHHHHHHHHhhHHHHHHHhCCCcchhhhhhhhhhhhhhhccCCC-ccccch-hhHHHHHHHHHHhhccCCCCC
Q 006141           92 FKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSR-DLAVGP-VSIASLIMGSMLRQEVSPTQN  169 (659)
Q Consensus        92 l~~Di~aGltv~~~~iPq~~aya~laglpp~~GLyss~v~~liy~~fGss~-~~~~Gp-~a~~sl~~~~~v~~~~~~~~~  169 (659)
                      +++++++|++..+.+..-.++--.+-|+||..+++++.++++++++++.+| +...|+ ++.++.+.... .        
T Consensus        14 ~~~~i~~GlQh~lam~~~~v~~PlilGl~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfafi~~~~~i~-~--------   84 (429)
T 3qe7_A           14 LLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLL-P--------   84 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGGGHHHHHHHG-G--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHhCCCHHHHHHHHHHHHHHHHHHcCCCCCeEecChHHHHHHHHHHH-h--------
Confidence            678999999888644433333333449999999999999999999985444 555787 45444443321 1        


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh--hhh--hhhhhccHhHHHHHHHHHHHHHHHHhhHhHhCccccCCCCChHHHHHH
Q 006141          170 PVLFLQLAFTATFFGGLVQASLGLL--RLG--FIIDFLSKATLIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMSS  245 (659)
Q Consensus       170 ~~~~~~~a~~~t~l~Gi~~~~lg~~--rlg--~l~~~lp~~vi~Gf~~gigl~i~~~ql~~~lG~~~~~~~~~~~~~~~~  245 (659)
                        ..++.+.+.++++|++++++|++  |+|  ++.+++|+.|++.+++.+|+.++..+++...|... .  .        
T Consensus        85 --~g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~-~--~--------  151 (429)
T 3qe7_A           85 --LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPA-E--G--------  151 (429)
T ss_dssp             --GCHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCB-T--T--------
T ss_pred             --cCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCC-C--C--------
Confidence              13677899999999999999998  775  99999999999999999999999999987543211 0  0        


Q ss_pred             HHhhcCcchHHHHHHHHHHHHHHHHHhhhhccCCCccccccchhHHHHHHHHHHHHHhhccCCCceeeeccc-cCCCCCC
Q 006141          246 VFHNTKEWSWQTILMGFCFLVFLLLTRHVGTKRPKLFWVSAGAPLVSVILSTLLVFAFKAQHHGISVIGKLQ-EGLNPPS  324 (659)
Q Consensus       246 ~~~~~~~~~~~~~~ig~~~l~~l~~~~~~~~~~~~~~~i~~~~~li~vi~~t~i~~~~~~~~~~v~~vg~ip-~gl~~p~  324 (659)
                           +..++.++.+++.++++++++.++.|++.|     .++.|+++++++++++.++..+  .+.+++.| .++|.+.
T Consensus       152 -----~~~~~~~~~la~~tl~iii~~~~~~kg~~~-----~~aiLigivvg~~~a~~~G~~d--~~~v~~a~~~~lP~~~  219 (429)
T 3qe7_A          152 -----QTPDSKTIIISITTLAVTVLGSVLFRGFLA-----IIPILIGVLVGYALSFAMGIVD--TTPIINAHWFALPTLY  219 (429)
T ss_dssp             -----BCCCHHHHHHHHHHHHHHHHHHHSSSTTTT-----THHHHHHHHHHHHHHHHHHHTT--SSHHHHSCSSCCCCCC
T ss_pred             -----ccccHHHHHHHHHHHHHHHHHHHHhcccch-----hhHHHHHHHHHHHHHHHhcCCC--cccccccccccccCCC
Confidence                 124567789999999988887765555443     3378999999999999987532  22233322 3455554


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc----ccCChhHHHHHhHhHhhhhccCcccccccchhhH
Q 006141          325 WNMLKFHGSHLGLVMKTGLITGIISLTEGIAVGRTFAALKNY----QVDGNKEMIAIGVMNIVGSSTSCYITTGAFSRSA  400 (659)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~iaiv~~~e~~~~~~~~a~~~~~----~~d~n~El~a~G~~Niv~s~fg~~p~~~s~srS~  400 (659)
                      .|+  |++..    +...+.++++.++|++...++.+++.|+    +.+.|||+.++|++|+++++||++|.|++..+++
T Consensus       220 ~P~--f~~~~----i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~p~Tt~~en~g  293 (429)
T 3qe7_A          220 TPR--FEWFA----ILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIG  293 (429)
T ss_dssp             CCC--CCHHH----HHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHH
T ss_pred             CCc--ccHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCCCcchHHHhHH
Confidence            554  44433    3344567888999999888888777664    4577999999999999999999999999777777


Q ss_pred             HHhhcCCCchhhHHHHHHHHHHHHHH--hhHHHhhhchhHHHHHHHHHHhhcCChhHHHHH--hcCCc---hhHHHHHHH
Q 006141          401 VNHNAGAKTAVSNVVMSVTVMVTLLF--LMPLFQYTPNVVLGAIIVTAVVGLIDVPAAHQI--WKIDK---FDFLVMLCA  473 (659)
Q Consensus       401 ~~~~~G~~T~la~i~~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l--~~~~~---~d~~v~~~t  473 (659)
                      +...+|++||++.+++|++++++.++  ++++++.+|.++++|+.+ +.++++....++.+  .|++.   .+..+..++
T Consensus       294 ~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l-~lfg~i~~~Gi~~l~~~~v~~~~~rn~~i~~~~  372 (429)
T 3qe7_A          294 VMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSL-LLYGVIGASGIRVLIESKVDYNKAQNLILTSVI  372 (429)
T ss_dssp             HHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHH-HHHHHHHHHHHHHHHHTTSCTTSHHHHHHHHHH
T ss_pred             HHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHH
Confidence            88899999999999999988877653  778999999999999766 59999988888888  77774   355554443


Q ss_pred             h
Q 006141          474 F  474 (659)
Q Consensus       474 ~  474 (659)
                      +
T Consensus       373 l  373 (429)
T 3qe7_A          373 L  373 (429)
T ss_dssp             H
T ss_pred             H
Confidence            3
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Back     alignment and structure
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Back     alignment and structure
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum} Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Back     alignment and structure
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A Back     alignment and structure
>3bl4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 2.20A {Arthrobacter SP} Back     alignment and structure
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 659
d1th8b_115 c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa 5e-12
d1vc1a_110 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 3e-10
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 61.0 bits (148), Expect = 5e-12
 Identities = 17/117 (14%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 532 GFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGT 591
             LI+ +   ++      L E++   +E            ++R ++L +  ++ +D+SG 
Sbjct: 11  DVLIVRLSGELDHHTAEELREQVTDVLE----------NRAIRHIVLNLGQLTFMDSSGL 60

Query: 592 SFFKDLRKAMEKKGVELVLVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASLS 648
                  K ++  G ++V+      V      S      +    +      A+ +L 
Sbjct: 61  GVILGRYKQIKNVGGQMVVCAVSPAVKRLFDMSGLFKIIR----VEADEQFALQALG 113
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Length = 110 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query659
d1h4xa_111 Anti-sigma factor antagonist SpoIIaa {Bacillus sph 99.66
d1th8b_115 Anti-sigma factor antagonist SpoIIaa {Bacillus ste 99.66
d1vc1a_110 Anti-sigma factor antagonist SpoIIaa {Thermotoga m 99.65
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus sphaericus [TaxId: 1421]

Probab=99.66  E-value=7.4e-17  Score=140.36  Aligned_cols=103  Identities=17%  Similarity=0.228  Sum_probs=95.2

Q ss_pred             cCcEEEEEeccceEEecchHHHHHHHHHHHHHHhHhhhccCCCceEEEEEecCCCccChHHHHHHHHHHHHHHHcCCEEE
Q 006141          530 IPGFLILSIEAPINFANTTYLNERILRWIEEYEAEENLNKQSSLRFVILEMSAVSAIDTSGTSFFKDLRKAMEKKGVELV  609 (659)
Q Consensus       530 ~~~i~I~rl~g~L~F~na~~~~~~l~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgi~~L~~l~~~~~~~gi~l~  609 (659)
                      .+++.|+|++|+|+|+|++++++++.+.++++          +.+.+|+||++|++||+||+++|.++.++++++|+++.
T Consensus         8 ~~~~~vv~~~G~L~~~~a~~~~~~~~~~i~~~----------~~~~vvlD~s~v~~iDssgl~~L~~~~~~~~~~g~~l~   77 (111)
T d1h4xa_           8 TRETVVIRLFGELDHHAVEQIRAKISTAIFQG----------AVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTI   77 (111)
T ss_dssp             ETTEEEEEEEEEECHHHHHHHHHHHHHHHHHT----------SCSEEEEEEEEEEEECTHHHHHHHHHHHHHHTTTCEEE
T ss_pred             eCCEEEEEEEEEEEHHHHHHHHHHHHHHHhcC----------CCcEEEEEEECCcccCchHHHHHHHHHHHHHHCCCEEE
Confidence            34789999999999999999999998876543          47899999999999999999999999999999999999


Q ss_pred             EEcCChhHHHHHHhcCCCccccCCCccccCHHHHHHHH
Q 006141          610 LVNPLAEVLEKLQRSDDSGDFKRPDSLYLTVGEAVASL  647 (659)
Q Consensus       610 l~~~~~~v~~~L~~~g~~~~~~~~~~if~s~~~Av~~~  647 (659)
                      ++|+++++++.|+.+| +.+.+    .|.|.+||++..
T Consensus        78 l~~~~~~v~~~l~~~g-l~~~~----~~~t~~eAl~~i  110 (111)
T d1h4xa_          78 LLNPSPTMRKVFQFSG-LGPWM----MDATEEEAIDRV  110 (111)
T ss_dssp             EESCCHHHHHHHHHTT-CGGGE----ECSCHHHHHHHT
T ss_pred             EecCCHHHHHHHHHcC-CCeEE----eeCCHHHHHHhc
Confidence            9999999999999999 98776    799999999875
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure